17-02-28 20:12:54.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3===================
17-02-28 20:12:54.303 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:12:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:54.311 -08 000000069 INF: Y Motor: Unshifted Position: 3341896
17-02-28 20:12:54.361 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.374 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:54.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (8)===================
17-02-28 20:12:54.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.374 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:12:54.485 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.621 -08 000000069 INF: Y Motor: Unshifted Position: 4112799
17-02-28 20:12:54.671 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:12:54.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:12:54.756 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:54.807 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.807 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:54.815 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:12:54.907 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:12:54.935 -08 000000069 INF: Y Motor: Unshifted Position: 4897736
17-02-28 20:12:54.985 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:54.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:12:54.998 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:12:55.098 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:12:55.110 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:55.184 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:55.247 -08 000000069 INF: Y Motor: Unshifted Position: 5676058
17-02-28 20:12:55.284 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:55.297 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:55.370 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:55.421 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:55.557 -08 000000069 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:12:55.557 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:55.557 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:55.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:55.623 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:55.623 -08 000000069 INF: Y Motor: Moved to 64.4706 after 2371 ms
17-02-28 20:12:55.623 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:55.681 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:55.682 -08 000000069 INF: Y Motor: Recv v 4096\r
17-02-28 20:12:55.682 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:55.682 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:55.744 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:55.744 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:55.744 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:55.781 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: Recv v 402653184\r
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:55.809 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:55.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:55.871 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:55.933 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:55.933 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:55.933 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:55.970 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:55.995 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:55.995 -08 000000069 INF: ======================================
17-02-28 20:12:55.996 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:12:55.998 -08 000000058 INF: ======================================
17-02-28 20:12:55.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:12:56.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:56.000 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:12:56.000 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:12:56.056 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:12:56.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:12:56.058 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:12:56.058 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:12:56.119 -08 000000100 INF: FPGA: Recv ZFREQCL
17-02-28 20:12:56.119 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:12:56.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:56.120 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:56.156 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP18240R\r
17-02-28 20:12:56.179 -08 000000087 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:12:56.179 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:12:56.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:56.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:56.181 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.181 -08 000000069 INF: ===================Set YMotor gains for scans===================
17-02-28 20:12:56.182 -08 000000069 INF: ======================================
17-02-28 20:12:56.182 -08 000000104 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:12:56.182 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.184 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:56.184 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:12:56.185 -08 000000104 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:12:56.246 -08 000000058 INF: FPGA: Recv TDIYPOS
17-02-28 20:12:56.246 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:56.247 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:56.248 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:12:56.248 -08 000000104 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:12:56.305 -08 000000052 INF: FPGA: Recv TDIYARM2
17-02-28 20:12:56.305 -08 000000104 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:12:56.307 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.308 -08 000000104 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:12:56.308 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:56.310 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:12:56.311 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:56.311 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:56.338 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:12:56 PM is 2
17-02-28 20:12:56.347 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:56.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:56.679 -08 000000104 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:12:56.680 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:12:56.680 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:56.693 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:56.695 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:56.697 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:12:56.743 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:56.993 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.056 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.082 -08 000000104 INF: Camera #2 AttachBuffer (imageDataPtr = 53821386880 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:12:57.082 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:12:57.082 -08 000000104 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:12:57.097 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:12:57.099 -08 000000104 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:12:57.100 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:57.101 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:57.102 -08 000000104 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:12:57.102 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:57.104 -08 000000104 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:12:57.104 -08 000000104 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:12:57.104 -08 000000104 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:12:57.104 -08 000000104 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:12:57.116 -08 000000034 INF: FPGA: Recv ZYT 
17-02-28 20:12:57.116 -08 000000104 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:12:57.116 -08 000000104 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:12:57.179 -08 000000030 INF: FPGA: Recv ZARM
17-02-28 20:12:57.179 -08 000000104 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.9406 ms
17-02-28 20:12:57.179 -08 000000104 INF: Z Motor: ArmAbsStepped took 75.0034 ms
17-02-28 20:12:57.179 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:12:57.181 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:12:57.182 -08 000000104 INF: ======================================
17-02-28 20:12:57.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:12:57.184 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:57.184 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.184 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.185 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.186 -08 000000106 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:12:57.186 -08 000000106 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:12:57.186 -08 000000106 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:12:57.186 -08 000000106 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:12:57.186 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:12:57.187 -08 000000106 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:12:57.187 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:12:57.187 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:12:57.187 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:12:57.188 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:12:57.306 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.368 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.553 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:12:57.553 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:12:57.553 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 366.2057 ms
17-02-28 20:12:57.553 -08 000000106 INF: Excitation Filter 2: Moved -107 steps in 366.6694 ms
17-02-28 20:12:57.553 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.393 ms
17-02-28 20:12:57.553 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.5425 ms
17-02-28 20:12:57.553 -08 000000106 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.8226 ms
17-02-28 20:12:57.553 -08 000000106 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.0735 ms
17-02-28 20:12:57.554 -08 000000089 INF: ======================================
17-02-28 20:12:57.554 -08 000000106 INF: ======================================
17-02-28 20:12:57.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:57.559 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:12:57.559 -08 000000039 INF: ===================Serial===================
17-02-28 20:12:57.559 -08 000000069 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:12:57.559 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:12:57.560 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:57.560 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:12:57.560 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:57.560 -08 000000039 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:12:57.561 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:12:57.561 -08 000000076 INF: ===================Camera TDI, Parallel===================
17-02-28 20:12:57.561 -08 000000010 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:12:57.562 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:12:57.562 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:12:57.564 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.564 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.565 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.565 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.565 -08 000000010 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:12:57.618 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.619 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.619 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:12:57.619 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:57.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.681 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.681 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:57.714 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.714 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.715 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.715 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:12:57.742 -08 000000069 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:12:57.807 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.807 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:12:57.807 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:12:57.864 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.864 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.865 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:57.865 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:57.868 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:57.868 -08 000000069 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:12:57.868 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:57.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:57.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:57.992 -08 000000069 INF: Y Motor: Unshifted Position: 5929231
17-02-28 20:12:58.014 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:58.014 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:58.015 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:12:58.015 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:12:58.042 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.164 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:12:58.164 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:12:58.164 -08 000000087 INF: ===================Camera #0 Frame #1===================
17-02-28 20:12:58.165 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:12:58.165 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:12:58.165 -08 000000090 INF: ===================Camera #2 Frame #1===================
17-02-28 20:12:58.168 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:58.305 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:58.306 -08 000000069 INF: Y Motor: Unshifted Position: 5882532
17-02-28 20:12:58.317 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:12:58.317 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:12:58.317 -08 000000087 INF: ===================Camera #0 Frame #3===================
17-02-28 20:12:58.318 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:12:58.318 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:12:58.318 -08 000000090 INF: ===================Camera #2 Frame #3===================
17-02-28 20:12:58.356 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.474 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:12:58.474 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:12:58.474 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:12:58.474 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:12:58.474 -08 000000087 INF: ===================Camera #0 Frame #4===================
17-02-28 20:12:58.474 -08 000000090 INF: ===================Camera #2 Frame #4===================
17-02-28 20:12:58.481 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.555 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:58.615 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:58.616 -08 000000069 INF: Y Motor: Unshifted Position: 5835574
17-02-28 20:12:58.627 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:58.627 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:58.627 -08 000000087 INF: ===================Camera #0 Frame #5===================
17-02-28 20:12:58.628 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:12:58.628 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:12:58.628 -08 000000090 INF: ===================Camera #2 Frame #5===================
17-02-28 20:12:58.666 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.678 -08 000000062 INF: FPGA: Recv ZWAIT 
17-02-28 20:12:58.678 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:12:58.678 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:58.678 -08 000000039 INF: ===================Serial===================
17-02-28 20:12:58.680 -08 000000039 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:12:58.680 -08 000000010 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:12:58.680 -08 000000039 INF: ===================Serial===================
17-02-28 20:12:58.681 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:12:58.681 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:12:58.681 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:12:58.681 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:12:58.681 -08 000000030 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:12:58.681 -08 000000030 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:12:58.681 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:12:58.682 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:12:58.682 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:12:58.682 -08 000000039 INF: ======================================
17-02-28 20:12:58.683 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:12:58.781 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:12:58.781 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:12:58.781 -08 000000090 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:12:58.781 -08 000000090 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:12:58.781 -08 000000090 INF: ===================Camera #2 Frame #6===================
17-02-28 20:12:58.781 -08 000000087 INF: ===================Camera #0 Frame #6===================
17-02-28 20:12:58.784 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:12:58.785 -08 000000087 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:12:58.785 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:58.787 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:12:58.792 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:58.828 -08 000000087 INF: Camera #0 ReleaseBuffer
17-02-28 20:12:58.828 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:12:58.829 -08 000000087 INF: ======================================
17-02-28 20:12:58.841 -08 000000090 INF: Camera #2 ReleaseBuffer
17-02-28 20:12:58.841 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:12:58.842 -08 000000090 INF: ======================================
17-02-28 20:12:58.844 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:12:58.845 -08 000000076 INF: ======================================
17-02-28 20:12:58.865 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:58.929 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:58.931 -08 000000069 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:12:58.981 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:12:59.052 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:12:59.052 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:12:59.052 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 370.337 ms
17-02-28 20:12:59.052 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 370.5696 ms
17-02-28 20:12:59.052 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.5026 ms
17-02-28 20:12:59.052 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.6019 ms
17-02-28 20:12:59.052 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.6939 ms
17-02-28 20:12:59.052 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.879 ms
17-02-28 20:12:59.053 -08 000000058 INF: ======================================
17-02-28 20:12:59.053 -08 000000030 INF: ======================================
17-02-28 20:12:59.054 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:12:59.055 -08 000000010 INF: ======================================
17-02-28 20:12:59.115 -08 000000069 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:12:59.115 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:12:59.115 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:59.177 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:59.177 -08 000000069 INF: Y Motor: Moved to 62.9074 after 1309 ms
17-02-28 20:12:59.177 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:12:59.179 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:59.240 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:59.241 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:12:59.241 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:12:59.241 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:12:59.302 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:59.302 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:12:59.302 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:12:59.365 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:12:59.429 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:12:59.490 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:59.491 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:59.491 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:12:59.491 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:12:59.552 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:59.554 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:12:59.554 -08 000000069 INF: ======================================
17-02-28 20:12:59.555 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:59.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:12:59.557 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.557 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:12:59.614 -08 000000076 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:12:59.615 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:12:59.676 -08 000000105 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:12:59.676 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:12:59.738 -08 000000050 INF: FPGA: Recv ZADCR 2422
17-02-28 20:12:59.738 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:12:59.738 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:12:59.801 -08 000000086 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:12:59.801 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:12:59.801 -08 000000018 INF: TDIScan finished after 6853.0331 ms
17-02-28 20:12:59.801 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:12:59.801 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:12:59.802 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:12:59.804 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:12:59.864 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:12:59.865 -08 000000095 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:12:59.866 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.867 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.868 -08 000000044 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:12:59.868 -08 000000030 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:12:59.868 -08 000000032 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:12:59.868 -08 000000044 INF: ======================================
17-02-28 20:12:59.868 -08 000000030 INF: ======================================
17-02-28 20:12:59.869 -08 000000032 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:12:59.869 -08 000000032 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:12:59.926 -08 000000032 INF: Y Motor: Recv ok\r
17-02-28 20:12:59.926 -08 000000032 INF: ======================================
17-02-28 20:12:59.927 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.928 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.929 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:12:59.989 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:12:59.989 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:00.017 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:00.017 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:00.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:00.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:00.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:00.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:13:00.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.082 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:13:00.082 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:13:00.114 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:00.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:00.426 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:00.487 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:00.737 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:00.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:13:00.772 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0468972597530989Best Z position at top surface = -0.118288169535349Best Z position at top surface + compensator offset = -0.0955881695353494 C:3,L:2,T
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.118288169535349
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.71318
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0468972597530989
17-02-28 20:13:00.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.3692
17-02-28 20:13:00.774 -08 000000018 INF: Z-height at LaneTopSurface is -0.118288169535349.
17-02-28 20:13:00.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.800 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:00.907 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:00.907 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:00.922 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:00.922 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:13:00.924 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:00.924 -08 000000018 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:13:00.924 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:00.925 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:00.925 -08 000000037 INF: ===================Move Tilt Motor 1===================
17-02-28 20:13:00.926 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:13:00.926 -08 000000037 INF: Tilt Motor 1: Moving to 5.1786 mm, started at 5.1796 mm, delta = -0.0010 mm
17-02-28 20:13:00.926 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:00.926 -08 000000089 INF: ===================Move Tilt Motor 2===================
17-02-28 20:13:00.926 -08 000000087 INF: Tilt Motor 3: Moving to 5.2710 mm, started at 5.2695 mm, delta = 0.0015 mm
17-02-28 20:13:00.926 -08 000000089 INF: Tilt Motor 2: Moving to 5.2431 mm, started at 5.2413 mm, delta = 0.0018 mm
17-02-28 20:13:00.927 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:00.929 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:00.987 -08 000000030 INF: FPGA: Recv T1RD 20391
17-02-28 20:13:00.987 -08 000000030 INF: FPGA: Recv T3RD 20745
17-02-28 20:13:00.987 -08 000000030 INF: FPGA: Recv T2RD 20635
17-02-28 20:13:00.987 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3439 + 1/6
17-02-28 20:13:00.987 -08 000000089 INF: Tilt Motor 2: Moving to 20642 encoder counts
17-02-28 20:13:00.987 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 3/6
17-02-28 20:13:00.987 -08 000000037 INF: Tilt Motor 1: Moving to 20388 encoder counts
17-02-28 20:13:00.987 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3457 + 3/6
17-02-28 20:13:00.987 -08 000000087 INF: Tilt Motor 3: Moving to 20752 encoder counts
17-02-28 20:13:00.987 -08 000000089 INF: FPGA: Xmit T2MOVETO 20642\n
17-02-28 20:13:00.990 -08 000000037 INF: FPGA: Xmit T1MOVETO 20388\n
17-02-28 20:13:00.991 -08 000000087 INF: FPGA: Xmit T3MOVETO 20752\n
17-02-28 20:13:01.050 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:01.111 -08 000000052 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:13:01.111 -08 000000052 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:13:01.111 -08 000000052 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:13:01.111 -08 000000087 INF: Tilt Motor 3: To move from 5.269 to 5.271 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:13:01.111 -08 000000089 INF: Tilt Motor 2: To move from 5.241 to 5.243 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:13:01.111 -08 000000037 INF: Tilt Motor 1: To move from 5.179 to 5.179 (-0.001 mm) should take 0 steps, but required 1 steps (0.002 mm). Slippage = 0.002 mm (-1.50%)
17-02-28 20:13:01.111 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:01.112 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:01.112 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:01.114 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:01.173 -08 000000051 INF: FPGA: Recv T3RD 20752
17-02-28 20:13:01.173 -08 000000051 INF: FPGA: Recv T2RD 20641
17-02-28 20:13:01.173 -08 000000051 INF: FPGA: Recv T1RD 20389
17-02-28 20:13:01.173 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:13:01.173 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:13:01.173 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:01.173 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:13:01.174 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:01.176 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:01.235 -08 000000101 INF: FPGA: Recv T1RD 20389
17-02-28 20:13:01.235 -08 000000101 INF: FPGA: Recv T2RD 20641
17-02-28 20:13:01.235 -08 000000101 INF: FPGA: Recv T3RD 20752
17-02-28 20:13:01.235 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:13:01.235 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:13:01.235 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:13:01.235 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:13:01.236 -08 000000089 INF: FPGA: Xmit T2RD\n
17-02-28 20:13:01.238 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:13:01.299 -08 000000032 INF: FPGA: Recv T3RD 20752
17-02-28 20:13:01.299 -08 000000032 INF: FPGA: Recv T2RD 20641
17-02-28 20:13:01.299 -08 000000032 INF: FPGA: Recv T1RD 20389
17-02-28 20:13:01.299 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:13:01.299 -08 000000037 INF: Tilt Motor 1: After move to 5.1786, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:01.299 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:13:01.299 -08 000000087 INF: Tilt Motor 3: After move to 5.2710, error = 0.0000, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:01.299 -08 000000037 INF: Tilt Motor 1: Moved to 5.1788 after 373.371 ms
17-02-28 20:13:01.299 -08 000000087 INF: Tilt Motor 3: Moved to 5.2710 after 373.3156 ms
17-02-28 20:13:01.299 -08 000000089 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:13:01.299 -08 000000089 INF: Tilt Motor 2: After move to 5.2431, error = -0.0003, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:01.299 -08 000000089 INF: Tilt Motor 2: Moved to 5.2428 after 373.3775 ms
17-02-28 20:13:01.299 -08 000000037 INF: ======================================
17-02-28 20:13:01.300 -08 000000087 INF: ======================================
17-02-28 20:13:01.300 -08 000000089 INF: ======================================
17-02-28 20:13:01.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.302 -08 000000018 INF: ETF Best Z: -0.09558817 mm (25057 DAC)
17-02-28 20:13:01.302 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.303 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.303 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:13:01.303 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:13:01.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:01.756 -08 000000098 INF: FPGA: Recv MIOCOMPF
17-02-28 20:13:01.756 -08 000000018 INF: Compensator: Moved IntoPath in 453 ms
17-02-28 20:13:01.756 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:01.764 -08 000000018 INF: Swath 1 position calculated to be: {X=8.349931, Y=39.70011} from estimated center X= 8.826996, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:01.764 -08 000000018 INF: Swath 2 position calculated to be: {X=9.457931, Y=39.70011} from estimated center X= 8.826996, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:01.769 -08 000000018 INF: Swath 0: Converted transform from (64.05065, -53.7112) pixels to (0.02208, -0.01863) mm.
17-02-28 20:13:01.775 -08 000000018 INF: Swath 1: Converted transform from (33.37777, -47.30994) pixels to (0.011385, -0.016215) mm.
17-02-28 20:13:01.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:01.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:01.776 -08 000000018 INF: Transformed XStagePosition from 8.349931 mm to 8.37201076373458 mm.
17-02-28 20:13:01.787 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4714863331765 mm.
17-02-28 20:13:01.787 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2714863331765 mm.
17-02-28 20:13:01.787 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3622363331765 mm.
17-02-28 20:13:01.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:01.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:01.790 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:01.790 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:13:01.796 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:01.796 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:01.797 -08 000000090 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:01.797 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:13:01.797 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:01.798 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:01.798 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:01.798 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:01.798 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:01.798 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:01.798 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:01.798 -08 000000109 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:01.798 -08 000000109 INF: Z Motor: Moving to -0.1156 mm, started at -0.0100 mm
17-02-28 20:13:01.798 -08 000000109 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:13:01.798 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000050 INF: ===================Move X Motor without settling===================
17-02-28 20:13:01.799 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:01.799 -08 000000050 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:01.799 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:01.799 -08 000000034 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:01.799 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:01.799 -08 000000062 INF: Y Motor: Moving to 64.4715 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:13:01.800 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:01.800 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:01.800 -08 000000074 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:01.800 -08 000000086 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:01.800 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:01.800 -08 000000046 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:01.800 -08 000000074 INF: ======================================
17-02-28 20:13:01.800 -08 000000095 INF: ======================================
17-02-28 20:13:01.800 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:01.800 -08 000000046 INF: ======================================
17-02-28 20:13:01.801 -08 000000106 INF: ======================================
17-02-28 20:13:01.801 -08 000000010 INF: ======================================
17-02-28 20:13:01.801 -08 000000086 INF: ======================================
17-02-28 20:13:01.802 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:01.802 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:01.803 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:01.803 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:01.803 -08 000000034 INF: ======================================
17-02-28 20:13:01.803 -08 000000037 INF: ======================================
17-02-28 20:13:01.803 -08 000000038 INF: ======================================
17-02-28 20:13:01.803 -08 000000087 INF: ======================================
17-02-28 20:13:01.804 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:01.804 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:01.805 -08 000000039 INF: ======================================
17-02-28 20:13:01.805 -08 000000089 INF: ======================================
17-02-28 20:13:01.806 -08 000000090 INF: ======================================
17-02-28 20:13:01.815 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:01.876 -08 000000089 INF: FPGA: Recv ZTRG 
17-02-28 20:13:01.876 -08 000000109 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:13:01.878 -08 000000050 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:01.878 -08 000000050 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:01.878 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:01.878 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:01.878 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:01.939 -08 000000052 INF: FPGA: Recv ZYT 
17-02-28 20:13:01.939 -08 000000109 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:13:01.939 -08 000000109 INF: FPGA: Xmit ZMV 30300\n
17-02-28 20:13:01.940 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:01.940 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Moving to 8.3720 mm @15.000 mm/sec, started at 8.9048 mm
17-02-28 20:13:01.942 -08 000000050 INF: X Motor: Xmit MA -20737\n
17-02-28 20:13:02.000 -08 000000039 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:13:02.000 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:02.002 -08 000000050 INF: X Motor: Recv MA -20737\r\n>
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Set target position to 5947149 encoder counts
17-02-28 20:13:02.002 -08 000000062 INF: Y Motor: Xmit s r0xca 5947149\r
17-02-28 20:13:02.002 -08 000000050 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:13:02.061 -08 000000010 INF: FPGA: Recv ZMV 
17-02-28 20:13:02.061 -08 000000109 INF: Z Motor: MoveAndTrigger 'ZMV' command took 122.0284 ms
17-02-28 20:13:02.061 -08 000000109 INF: FPGA: Xmit ZDACR\n
17-02-28 20:13:02.063 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:02.063 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:13:02.063 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:02.065 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:02.125 -08 000000038 INF: FPGA: Recv ZDACR 30300
17-02-28 20:13:02.125 -08 000000109 INF: Z Motor: MoveAndTrigger took 326.5635 ms w/comms
17-02-28 20:13:02.125 -08 000000109 INF: Z Motor: After move to -0.1156, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:02.125 -08 000000109 INF: Z Motor: MoveAbsStepped took 326.7387 ms
17-02-28 20:13:02.125 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:02.127 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:02.127 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:02.127 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:02.127 -08 000000062 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:13:02.127 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:02.128 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.128 -08 000000054 INF: ===================Camera Arm TDI===================
17-02-28 20:13:02.128 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.129 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:02.129 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:02.129 -08 000000054 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:02.130 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:02.130 -08 000000085 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:02.187 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:13:02.188 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:02.188 -08 000000085 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:02.249 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:13:02.249 -08 000000085 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:02.251 -08 000000062 INF: Y Motor: Unshifted Position: 5874658
17-02-28 20:13:02.251 -08 000000085 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:02.251 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.253 -08 000000085 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:02.253 -08 000000085 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:02.253 -08 000000085 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:02.301 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:02.313 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:02.313 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.315 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:02.315 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.317 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:02.317 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:02.317 -08 000000085 INF: Z Motor: Arming to move to -0.0756 mm
17-02-28 20:13:02.317 -08 000000085 INF: FPGA: Xmit ZYT 6427149 4\n
17-02-28 20:13:02.375 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:13:02.375 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6374658 enc / 63.747 mm / ) = 6427149 enc / 64.271 mm
17-02-28 20:13:02.375 -08 000000085 INF: FPGA: Xmit ZARM 19815\n
17-02-28 20:13:02.377 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:02.427 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:02.438 -08 000000086 INF: FPGA: Recv ZARM
17-02-28 20:13:02.438 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.8737 ms
17-02-28 20:13:02.438 -08 000000085 INF: Z Motor: ArmAbsStepped took 120.7929 ms
17-02-28 20:13:02.438 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:02.439 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:02.441 -08 000000050 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:02.441 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:02.441 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.443 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:02.443 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:13:02.445 -08 000000085 INF: ======================================
17-02-28 20:13:02.502 -08 000000050 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:02.502 -08 000000050 INF: X Motor: Moved to 8.3726 after 500 ms
17-02-28 20:13:02.502 -08 000000050 INF: ======================================
17-02-28 20:13:02.563 -08 000000062 INF: Y Motor: Unshifted Position: 5947150
17-02-28 20:13:02.563 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:02.563 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:02.625 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.625 -08 000000062 INF: Y Motor: Moved to 64.4715 after 498 ms
17-02-28 20:13:02.625 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:02.687 -08 000000062 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:02.687 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:02.687 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:02.690 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:02.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:02.751 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.751 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:02.751 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:02.813 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:02.874 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:02.939 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:02.939 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:02.939 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:03.000 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:03.000 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.000 -08 000000062 INF: ======================================
17-02-28 20:13:03.001 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:13:03.002 -08 000000032 INF: ======================================
17-02-28 20:13:03.060 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:03.113 -08 000000054 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:03.114 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:03.114 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:03.129 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:03.131 -08 000000054 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:03.310 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.373 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:03.623 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.684 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:03.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:03.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.189 -08 000000054 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:04.189 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:04.189 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:04.204 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:04.206 -08 000000054 INF: ===================Camera Arm TDI===================
17-02-28 20:13:04.207 -08 000000054 INF: ======================================
17-02-28 20:13:04.208 -08 000000109 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:04.209 -08 000000109 INF: ======================================
17-02-28 20:13:04.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:04.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:04.211 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:04.211 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:04.248 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:04.248 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:04.248 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:04.307 -08 000000104 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:04.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:04.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:04.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.308 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:04.372 -08 000000062 INF: FPGA: Recv TDIYERD 6447151
17-02-28 20:13:04.372 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447151 counts (64.472 mm)
17-02-28 20:13:04.372 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:04.373 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:04.373 -08 000000010 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:04.374 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:04.374 -08 000000064 INF: ======================================
17-02-28 20:13:04.374 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:04.375 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:04.375 -08 000000010 INF: FPGA: Xmit TDIYPOS 6336224\n
17-02-28 20:13:04.434 -08 000000068 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:04.434 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:04.436 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:04.436 -08 000000010 INF: FPGA: Xmit TDIYARM3 139264 6427149 1 1\n
17-02-28 20:13:04.497 -08 000000106 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:04.497 -08 000000010 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:04.498 -08 000000010 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:04.499 -08 000000010 INF: ======================================
17-02-28 20:13:04.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:04.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:04.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.503 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:04.503 -08 000000102 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:04.503 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:04.503 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:04.503 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:04.503 -08 000000102 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:04.503 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:04.503 -08 000000102 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:04.503 -08 000000102 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:04.506 -08 000000102 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:04.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:04.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.869 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:13:04.869 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:13:04.869 -08 000000102 INF: Excitation Filter 1: Moved -107 steps in 365.7221 ms
17-02-28 20:13:04.869 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 365.9145 ms
17-02-28 20:13:04.869 -08 000000102 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.873 ms
17-02-28 20:13:04.869 -08 000000102 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.9814 ms
17-02-28 20:13:04.869 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0141 ms
17-02-28 20:13:04.869 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.1928 ms
17-02-28 20:13:04.869 -08 000000102 INF: ======================================
17-02-28 20:13:04.869 -08 000000104 INF: ======================================
17-02-28 20:13:04.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.872 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:04.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:04.873 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:13:04.873 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:04.873 -08 000000090 INF: ===================FPGA Z Wait===================
17-02-28 20:13:04.873 -08 000000085 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:04.873 -08 000000090 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:04.873 -08 000000085 INF: Y Motor: Moving to 14.8231 mm @6.500 mm/sec, started at 64.4715 mm
17-02-28 20:13:04.873 -08 000000085 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:04.873 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:04.873 -08 000000045 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:04.873 -08 000000058 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:04.874 -08 000000058 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:04.874 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:13:04.874 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:13:04.876 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:04.876 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:04.878 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:04.878 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:04.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:04.935 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:04.935 -08 000000085 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:04.935 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:04.997 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:04.997 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:05.026 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.026 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.028 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.028 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Set target position to 982315 encoder counts
17-02-28 20:13:05.058 -08 000000085 INF: Y Motor: Xmit s r0xca 982315\r
17-02-28 20:13:05.123 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:05.123 -08 000000085 INF: Y Motor: Start the move command
17-02-28 20:13:05.123 -08 000000085 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:05.176 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.176 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.178 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:05.178 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:05.186 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:05.186 -08 000000085 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:05.186 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.186 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:05.246 -08 000000081 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:05.247 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:05.247 -08 000000090 INF: ======================================
17-02-28 20:13:05.308 -08 000000085 INF: Y Motor: Unshifted Position: 5884640
17-02-28 20:13:05.326 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:05.326 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:13:05.326 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:13:05.328 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:05.328 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:05.328 -08 000000068 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:05.358 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.484 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.488 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:13:05.488 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:13:05.488 -08 000000010 INF: ===================Camera #0 Frame #10===================
17-02-28 20:13:05.494 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:05.494 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:05.494 -08 000000068 INF: ===================Camera #2 Frame #11===================
17-02-28 20:13:05.497 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:05.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:05.623 -08 000000085 INF: Y Motor: Unshifted Position: 5682281
17-02-28 20:13:05.657 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:05.657 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:05.657 -08 000000010 INF: ===================Camera #0 Frame #17===================
17-02-28 20:13:05.663 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:05.663 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:05.663 -08 000000068 INF: ===================Camera #2 Frame #17===================
17-02-28 20:13:05.673 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.796 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:05.828 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:05.828 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:05.828 -08 000000010 INF: ===================Camera #0 Frame #23===================
17-02-28 20:13:05.832 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:05.832 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:05.832 -08 000000068 INF: ===================Camera #2 Frame #23===================
17-02-28 20:13:05.868 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:05.933 -08 000000085 INF: Y Motor: Unshifted Position: 5480786
17-02-28 20:13:05.983 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:05.996 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:05.996 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:05.996 -08 000000010 INF: ===================Camera #0 Frame #29===================
17-02-28 20:13:06.001 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:06.001 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:06.001 -08 000000068 INF: ===================Camera #2 Frame #29===================
17-02-28 20:13:06.109 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.118 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:06.164 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:13:06.164 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:13:06.164 -08 000000010 INF: ===================Camera #0 Frame #35===================
17-02-28 20:13:06.170 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:13:06.170 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:13:06.170 -08 000000068 INF: ===================Camera #2 Frame #36===================
17-02-28 20:13:06.180 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:06.247 -08 000000085 INF: Y Motor: Unshifted Position: 5277764
17-02-28 20:13:06.297 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.334 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:06.334 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:06.334 -08 000000010 INF: ===================Camera #0 Frame #42===================
17-02-28 20:13:06.344 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:06.344 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:06.344 -08 000000068 INF: ===================Camera #2 Frame #42===================
17-02-28 20:13:06.421 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.431 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:06.493 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:06.505 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:06.505 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:06.505 -08 000000010 INF: ===================Camera #0 Frame #48===================
17-02-28 20:13:06.514 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:06.514 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:06.514 -08 000000068 INF: ===================Camera #2 Frame #48===================
17-02-28 20:13:06.559 -08 000000085 INF: Y Motor: Unshifted Position: 5074962
17-02-28 20:13:06.609 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.673 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:06.673 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:06.673 -08 000000010 INF: ===================Camera #0 Frame #54===================
17-02-28 20:13:06.684 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:06.684 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:06.684 -08 000000068 INF: ===================Camera #2 Frame #54===================
17-02-28 20:13:06.731 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:06.743 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:06.807 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:06.842 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:13:06.842 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:13:06.842 -08 000000010 INF: ===================Camera #0 Frame #60===================
17-02-28 20:13:06.854 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:13:06.854 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:13:06.854 -08 000000068 INF: ===================Camera #2 Frame #61===================
17-02-28 20:13:06.871 -08 000000085 INF: Y Motor: Unshifted Position: 4870649
17-02-28 20:13:06.921 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.011 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:13:07.011 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:13:07.011 -08 000000010 INF: ===================Camera #0 Frame #66===================
17-02-28 20:13:07.028 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:13:07.028 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:13:07.028 -08 000000068 INF: ===================Camera #2 Frame #67===================
17-02-28 20:13:07.047 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:07.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:07.180 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:07.180 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:07.180 -08 000000010 INF: ===================Camera #0 Frame #73===================
17-02-28 20:13:07.182 -08 000000085 INF: Y Motor: Unshifted Position: 4667627
17-02-28 20:13:07.198 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:07.198 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:07.198 -08 000000068 INF: ===================Camera #2 Frame #73===================
17-02-28 20:13:07.232 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.352 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:13:07.352 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:13:07.352 -08 000000010 INF: ===================Camera #0 Frame #79===================
17-02-28 20:13:07.355 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.368 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:13:07.368 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:13:07.368 -08 000000068 INF: ===================Camera #2 Frame #80===================
17-02-28 20:13:07.369 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:07.431 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:07.494 -08 000000085 INF: Y Motor: Unshifted Position: 4464818
17-02-28 20:13:07.521 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:13:07.521 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:13:07.521 -08 000000010 INF: ===================Camera #0 Frame #85===================
17-02-28 20:13:07.542 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:13:07.542 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:13:07.542 -08 000000068 INF: ===================Camera #2 Frame #86===================
17-02-28 20:13:07.544 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.667 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.681 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:07.689 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:13:07.689 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:13:07.689 -08 000000010 INF: ===================Camera #0 Frame #91===================
17-02-28 20:13:07.713 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:13:07.713 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:13:07.713 -08 000000068 INF: ===================Camera #2 Frame #92===================
17-02-28 20:13:07.741 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:07.806 -08 000000085 INF: Y Motor: Unshifted Position: 4263327
17-02-28 20:13:07.856 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.859 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:13:07.859 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:13:07.859 -08 000000010 INF: ===================Camera #0 Frame #98===================
17-02-28 20:13:07.884 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:13:07.884 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:13:07.884 -08 000000068 INF: ===================Camera #2 Frame #99===================
17-02-28 20:13:07.980 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:07.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:08.032 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:13:08.032 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:13:08.032 -08 000000010 INF: ===================Camera #0 Frame #104===================
17-02-28 20:13:08.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:08.058 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:13:08.058 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:13:08.058 -08 000000068 INF: ===================Camera #2 Frame #105===================
17-02-28 20:13:08.119 -08 000000085 INF: Y Motor: Unshifted Position: 4060301
17-02-28 20:13:08.169 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.202 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:13:08.202 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:13:08.202 -08 000000010 INF: ===================Camera #0 Frame #110===================
17-02-28 20:13:08.229 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:13:08.229 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:13:08.229 -08 000000068 INF: ===================Camera #2 Frame #111===================
17-02-28 20:13:08.293 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.303 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:08.365 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:08.372 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:13:08.372 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:13:08.372 -08 000000010 INF: ===================Camera #0 Frame #117===================
17-02-28 20:13:08.399 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:13:08.399 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:13:08.399 -08 000000068 INF: ===================Camera #2 Frame #118===================
17-02-28 20:13:08.431 -08 000000085 INF: Y Motor: Unshifted Position: 3855765
17-02-28 20:13:08.481 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.545 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:13:08.545 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:13:08.545 -08 000000010 INF: ===================Camera #0 Frame #123===================
17-02-28 20:13:08.573 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:13:08.573 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:13:08.573 -08 000000068 INF: ===================Camera #2 Frame #124===================
17-02-28 20:13:08.605 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.615 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:08.677 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:08.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:08.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:08.678 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:13:08.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:13:08.715 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:13:08.715 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:13:08.715 -08 000000010 INF: ===================Camera #0 Frame #129===================
17-02-28 20:13:08.743 -08 000000085 INF: Y Motor: Unshifted Position: 3654483
17-02-28 20:13:08.744 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:13:08.744 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:13:08.744 -08 000000068 INF: ===================Camera #2 Frame #130===================
17-02-28 20:13:08.793 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:08.885 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:13:08.885 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:13:08.885 -08 000000010 INF: ===================Camera #0 Frame #135===================
17-02-28 20:13:08.915 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:13:08.915 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:13:08.915 -08 000000068 INF: ===================Camera #2 Frame #137===================
17-02-28 20:13:08.918 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.053 -08 000000085 INF: Y Motor: Unshifted Position: 3451028
17-02-28 20:13:09.055 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:13:09.055 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:13:09.055 -08 000000010 INF: ===================Camera #0 Frame #142===================
17-02-28 20:13:09.089 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:13:09.089 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:13:09.089 -08 000000068 INF: ===================Camera #2 Frame #143===================
17-02-28 20:13:09.103 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.227 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.228 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:13:09.228 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:13:09.228 -08 000000010 INF: ===================Camera #0 Frame #148===================
17-02-28 20:13:09.260 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:13:09.260 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:13:09.260 -08 000000068 INF: ===================Camera #2 Frame #149===================
17-02-28 20:13:09.367 -08 000000085 INF: Y Motor: Unshifted Position: 3248670
17-02-28 20:13:09.397 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:13:09.397 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:13:09.397 -08 000000010 INF: ===================Camera #0 Frame #154===================
17-02-28 20:13:09.417 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.431 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:13:09.431 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:13:09.431 -08 000000068 INF: ===================Camera #2 Frame #156===================
17-02-28 20:13:09.541 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.567 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:13:09.567 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:13:09.567 -08 000000010 INF: ===================Camera #0 Frame #161===================
17-02-28 20:13:09.605 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:13:09.605 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:13:09.605 -08 000000068 INF: ===================Camera #2 Frame #162===================
17-02-28 20:13:09.677 -08 000000085 INF: Y Motor: Unshifted Position: 3045224
17-02-28 20:13:09.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:09.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:13:09.727 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.740 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:13:09.740 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:13:09.740 -08 000000010 INF: ===================Camera #0 Frame #167===================
17-02-28 20:13:09.776 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:13:09.776 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:13:09.776 -08 000000068 INF: ===================Camera #2 Frame #168===================
17-02-28 20:13:09.853 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:09.910 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:13:09.910 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:13:09.910 -08 000000010 INF: ===================Camera #0 Frame #173===================
17-02-28 20:13:09.947 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:13:09.947 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:13:09.947 -08 000000068 INF: ===================Camera #2 Frame #175===================
17-02-28 20:13:09.991 -08 000000085 INF: Y Motor: Unshifted Position: 2842858
17-02-28 20:13:10.041 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.080 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:13:10.080 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:13:10.080 -08 000000010 INF: ===================Camera #0 Frame #179===================
17-02-28 20:13:10.121 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:13:10.121 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:13:10.121 -08 000000068 INF: ===================Camera #2 Frame #181===================
17-02-28 20:13:10.167 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.250 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:13:10.250 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:13:10.250 -08 000000010 INF: ===================Camera #0 Frame #186===================
17-02-28 20:13:10.292 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:13:10.292 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:13:10.292 -08 000000068 INF: ===================Camera #2 Frame #187===================
17-02-28 20:13:10.303 -08 000000085 INF: Y Motor: Unshifted Position: 2638756
17-02-28 20:13:10.353 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.423 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:13:10.423 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:13:10.423 -08 000000010 INF: ===================Camera #0 Frame #192===================
17-02-28 20:13:10.463 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:13:10.463 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:13:10.463 -08 000000068 INF: ===================Camera #2 Frame #194===================
17-02-28 20:13:10.477 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.593 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:13:10.593 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:13:10.593 -08 000000010 INF: ===================Camera #0 Frame #198===================
17-02-28 20:13:10.613 -08 000000085 INF: Y Motor: Unshifted Position: 2436404
17-02-28 20:13:10.637 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:13:10.637 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:13:10.637 -08 000000068 INF: ===================Camera #2 Frame #200===================
17-02-28 20:13:10.663 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:10.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:13:10.763 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:13:10.763 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:13:10.763 -08 000000010 INF: ===================Camera #0 Frame #205===================
17-02-28 20:13:10.787 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.807 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:13:10.807 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:13:10.807 -08 000000068 INF: ===================Camera #2 Frame #206===================
17-02-28 20:13:10.924 -08 000000085 INF: Y Motor: Unshifted Position: 2234251
17-02-28 20:13:10.936 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:13:10.936 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:13:10.936 -08 000000010 INF: ===================Camera #0 Frame #211===================
17-02-28 20:13:10.974 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:10.978 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:13:10.978 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:13:10.978 -08 000000068 INF: ===================Camera #2 Frame #213===================
17-02-28 20:13:11.101 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.105 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:13:11.105 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:13:11.105 -08 000000010 INF: ===================Camera #0 Frame #217===================
17-02-28 20:13:11.152 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:13:11.152 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:13:11.152 -08 000000068 INF: ===================Camera #2 Frame #219===================
17-02-28 20:13:11.236 -08 000000085 INF: Y Motor: Unshifted Position: 2030579
17-02-28 20:13:11.275 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:13:11.275 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:13:11.275 -08 000000010 INF: ===================Camera #0 Frame #223===================
17-02-28 20:13:11.286 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.323 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:13:11.323 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:13:11.323 -08 000000068 INF: ===================Camera #2 Frame #225===================
17-02-28 20:13:11.413 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.445 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:13:11.445 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:13:11.445 -08 000000010 INF: ===================Camera #0 Frame #230===================
17-02-28 20:13:11.494 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:13:11.494 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:13:11.494 -08 000000068 INF: ===================Camera #2 Frame #232===================
17-02-28 20:13:11.549 -08 000000085 INF: Y Motor: Unshifted Position: 1827559
17-02-28 20:13:11.599 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.618 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:13:11.618 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:13:11.618 -08 000000010 INF: ===================Camera #0 Frame #236===================
17-02-28 20:13:11.668 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:13:11.668 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:13:11.668 -08 000000068 INF: ===================Camera #2 Frame #238===================
17-02-28 20:13:11.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:11.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:13:11.723 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.788 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:13:11.788 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:13:11.788 -08 000000010 INF: ===================Camera #0 Frame #242===================
17-02-28 20:13:11.839 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:13:11.839 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:13:11.839 -08 000000068 INF: ===================Camera #2 Frame #244===================
17-02-28 20:13:11.860 -08 000000085 INF: Y Motor: Unshifted Position: 1625414
17-02-28 20:13:11.910 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:11.957 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:13:11.957 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:13:11.957 -08 000000010 INF: ===================Camera #0 Frame #249===================
17-02-28 20:13:12.010 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:13:12.010 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:13:12.010 -08 000000068 INF: ===================Camera #2 Frame #251===================
17-02-28 20:13:12.037 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.130 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:13:12.130 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:13:12.130 -08 000000010 INF: ===================Camera #0 Frame #255===================
17-02-28 20:13:12.172 -08 000000085 INF: Y Motor: Unshifted Position: 1421737
17-02-28 20:13:12.184 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:13:12.184 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:13:12.184 -08 000000068 INF: ===================Camera #2 Frame #257===================
17-02-28 20:13:12.222 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.300 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:13:12.300 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:13:12.300 -08 000000010 INF: ===================Camera #0 Frame #261===================
17-02-28 20:13:12.349 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.355 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:13:12.355 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:13:12.355 -08 000000068 INF: ===================Camera #2 Frame #263===================
17-02-28 20:13:12.470 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:13:12.470 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:13:12.470 -08 000000010 INF: ===================Camera #0 Frame #267===================
17-02-28 20:13:12.485 -08 000000085 INF: Y Motor: Unshifted Position: 1218938
17-02-28 20:13:12.524 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:13:12.524 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:13:12.524 -08 000000068 INF: ===================Camera #2 Frame #269===================
17-02-28 20:13:12.535 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.607 -08 000000083 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:12.607 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:12.609 -08 000000058 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:12.610 -08 000000095 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:12.610 -08 000000044 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:12.610 -08 000000095 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:12.610 -08 000000095 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:12.610 -08 000000095 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:12.610 -08 000000044 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:12.610 -08 000000095 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:12.610 -08 000000044 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:12.610 -08 000000044 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:12.611 -08 000000044 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:12.639 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:12.639 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:12.639 -08 000000010 INF: ===================Camera #0 Frame #272===================
17-02-28 20:13:12.654 -08 000000010 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:12.655 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:12.659 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:12.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:13:12.796 -08 000000085 INF: Y Motor: Unshifted Position: 1016786
17-02-28 20:13:12.808 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:12.808 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:12.808 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:12.808 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-02-28 20:13:12.808 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:13:12.817 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:12.818 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:12.839 -08 000000010 INF: ======================================
17-02-28 20:13:12.846 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:12.983 -08 000000106 INF: FPGA: Recv EX1MV
17-02-28 20:13:12.983 -08 000000106 INF: FPGA: Recv EX2MV
17-02-28 20:13:12.983 -08 000000095 INF: Excitation Filter 1: Moved 107 steps in 373.1897 ms
17-02-28 20:13:12.983 -08 000000095 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.2995 ms
17-02-28 20:13:12.983 -08 000000095 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.376 ms
17-02-28 20:13:12.983 -08 000000044 INF: Excitation Filter 2: Moved 107 steps in 373.0764 ms
17-02-28 20:13:12.983 -08 000000095 INF: ======================================
17-02-28 20:13:12.983 -08 000000044 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.5474 ms
17-02-28 20:13:12.983 -08 000000044 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.6626 ms
17-02-28 20:13:12.984 -08 000000044 INF: ======================================
17-02-28 20:13:12.985 -08 000000085 INF: Y Motor: Unshifted Position: 982316
17-02-28 20:13:12.985 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:12.985 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:12.985 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:12.986 -08 000000058 INF: ======================================
17-02-28 20:13:13.019 -08 000000068 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:13.019 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:13:13.047 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:13.047 -08 000000085 INF: Y Motor: Moved to 14.8232 after 7860 ms
17-02-28 20:13:13.047 -08 000000085 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:13.053 -08 000000068 INF: ======================================
17-02-28 20:13:13.055 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:13:13.056 -08 000000045 INF: ======================================
17-02-28 20:13:13.110 -08 000000085 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:13.110 -08 000000085 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:13.110 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:13.171 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:13.171 -08 000000085 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:13.171 -08 000000085 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:13.233 -08 000000085 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:13.299 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:13.358 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:13.358 -08 000000085 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:13.358 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:13.420 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:13.420 -08 000000085 INF: ======================================
17-02-28 20:13:13.421 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:13.422 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:13.424 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.424 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:13.483 -08 000000095 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:13.483 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:13.545 -08 000000068 INF: FPGA: Recv TDIYERD 1482316
17-02-28 20:13:13.545 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:13.609 -08 000000044 INF: FPGA: Recv ZADCR 28632
17-02-28 20:13:13.609 -08 000000018 INF: At scan end Y pos = 14.823 and Z pos = -0.110. Y moved -48.539 mm
17-02-28 20:13:13.610 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:13.669 -08 000000083 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:13:13.669 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:13:13.669 -08 000000018 INF: TDIScan finished after 11892.5787 ms
17-02-28 20:13:13.669 -08 000000018 INF: Image[0]: Y should trigger at 63.362 mm, 2nd row was at 64.271 mm (error = 0.909 mm)
17-02-28 20:13:13.669 -08 000000018 INF: Image[2]: Y should trigger at 63.362 mm, 2nd row was at 64.271 mm (error = 0.909 mm)
17-02-28 20:13:13.671 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:13.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:13.678 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:13:13.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:13.709 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.848 um
17-02-28 20:13:13.710 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.711 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:13.733 -08 000000030 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:13.734 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:13.735 -08 000000074 INF: ===================Dither Clean Up Command===================
17-02-28 20:13:13.735 -08 000000064 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:13.735 -08 000000058 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:13.735 -08 000000054 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:13.735 -08 000000054 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:13.735 -08 000000064 INF: ======================================
17-02-28 20:13:13.735 -08 000000054 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:13.736 -08 000000058 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:13.736 -08 000000058 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:13.736 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:13.736 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:13.737 -08 000000069 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:13:13.739 -08 000000068 INF: ===================LFT:Extracting coords===================
17-02-28 20:13:13.764 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:13.765 -08 000000068 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:13:13.766 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.766 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.766 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.766 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.767 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:13.777 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:13.793 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:13.793 -08 000000032 INF: FPGA: Recv ZSEL 
17-02-28 20:13:13.793 -08 000000069 INF: FPGA: Xmit ZDACW 30300\n
17-02-28 20:13:13.793 -08 000000054 INF: ======================================
17-02-28 20:13:13.795 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:13.795 -08 000000058 INF: ======================================
17-02-28 20:13:13.840 -08 000000081 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.841 -08 000000090 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.841 -08 000000083 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.841 -08 000000105 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:13.855 -08 000000104 INF: FPGA: Recv ZDACW 
17-02-28 20:13:13.855 -08 000000069 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:13:13.856 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:13:13.856 -08 000000042 INF: Current Position of Pump is: 18240
17-02-28 20:13:13.856 -08 000000069 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:13:13.921 -08 000000058 INF: FPGA: Recv TDIBB
17-02-28 20:13:13.921 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:13.922 -08 000000069 INF: ======================================
17-02-28 20:13:13.956 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:13.992 -08 000000081 INF: LFT found best fwhm score 2.000004 in 151 ms
17-02-28 20:13:13.992 -08 000000081 INF: LFT found good score at index 6109 with fwhm value 2.000004. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.992 -08 000000083 INF: LFT found best fwhm score 2.000208 in 151 ms
17-02-28 20:13:13.992 -08 000000105 INF: LFT found best fwhm score 2.139231 in 151 ms
17-02-28 20:13:13.992 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.992 -08 000000105 INF: LFT found good score at index 8969 with fwhm value 2.139231. Next cycle, cycle 4 starting Z position for top surface is at -0.117 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.992 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.992 -08 000000081 INF: ======================================
17-02-28 20:13:13.993 -08 000000105 INF: ======================================
17-02-28 20:13:13.993 -08 000000083 INF: LFT found good score at index 3261 with fwhm value 2.000208. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.993 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.994 -08 000000083 INF: ======================================
17-02-28 20:13:13.995 -08 000000090 INF: LFT found best fwhm score 2.00018 in 151 ms
17-02-28 20:13:13.995 -08 000000090 INF: LFT found good score at index 7153 with fwhm value 2.00018. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:13.995 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:13:13.995 -08 000000090 INF: ======================================
17-02-28 20:13:13.997 -08 000000068 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:13.998 -08 000000068 INF: LFT weighted average best Z for top surface is at -0.118mm FC:A, C:3,L:2,T
17-02-28 20:13:13.998 -08 000000068 INF: ======================================
17-02-28 20:13:13.999 -08 000000074 INF: ======================================
17-02-28 20:13:14.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:14.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:14.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 8.349931 Y = 39.70011===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Waiting for image analysis===================
17-02-28 20:13:14.004 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:14.029 -08 000000018 INF: Waited 26 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:13:14.029 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:14.030 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:14.030 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.030 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:14.030 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:13:14.031 -08 000000018 INF: Transformed XStagePosition from 9.457931 mm to 9.46931556519121 mm.
17-02-28 20:13:14.044 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4739013327062 mm.
17-02-28 20:13:14.044 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2739013327062 mm.
17-02-28 20:13:14.044 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3646513327062 mm.
17-02-28 20:13:14.047 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.048 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:14.048 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:14.048 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -115.6 um, section = B_1
17-02-28 20:13:14.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:14.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:14.085 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:13:14.085 -08 000000042 INF: Current Position of Pump is: 18240
17-02-28 20:13:14.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:13:14.102 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":2,"Tile":1101,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF191","HCSMMF265","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.108 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:14.108 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:13:14.111 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:14.118 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:14.119 -08 000000055 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:14.119 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:13:14.119 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:14.119 -08 000000078 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:14.120 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:14.120 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:14.121 -08 000000055 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:14.121 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:14.122 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:14.122 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:14.123 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:14.124 -08 000000038 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:14.124 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:14.125 -08 000000038 INF: ======================================
17-02-28 20:13:14.125 -08 000000030 INF: Y Motor: Moving to 64.4739 mm @25.000 mm/sec, started at 14.8232 mm
17-02-28 20:13:14.125 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:14.125 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:14.126 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:14.126 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:14.128 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:14.128 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.129 -08 000000029 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:14.129 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.129 -08 000000029 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:14.130 -08 000000095 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:14.130 -08 000000029 INF: ======================================
17-02-28 20:13:14.130 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:14.130 -08 000000095 INF: ======================================
17-02-28 20:13:14.130 -08 000000050 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:14.131 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:14.131 -08 000000038 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:14.131 -08 000000050 INF: ======================================
17-02-28 20:13:14.133 -08 000000055 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:14.133 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:13:14.134 -08 000000050 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:14.134 -08 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:14.134 -08 000000055 INF: ======================================
17-02-28 20:13:14.135 -08 000000029 INF: ======================================
17-02-28 20:13:14.135 -08 000000050 INF: ======================================
17-02-28 20:13:14.136 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:14.137 -08 000000054 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:14.137 -08 000000105 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:14.137 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:14.137 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:14.137 -08 000000054 INF: ======================================
17-02-28 20:13:14.139 -08 000000105 INF: ======================================
17-02-28 20:13:14.139 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:14.139 -08 000000010 INF: ======================================
17-02-28 20:13:14.141 -08 000000089 INF: FPGA: Recv ZSEL 
17-02-28 20:13:14.141 -08 000000085 INF: ======================================
17-02-28 20:13:14.142 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:14.142 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:14.142 -08 000000038 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:14.144 -08 000000087 INF: ======================================
17-02-28 20:13:14.146 -08 000000064 INF: ======================================
17-02-28 20:13:14.180 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":2,"Tile":1102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF186","HCSMMF213","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.182 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":2,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF185","HCSMMF261","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.184 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":2,"Tile":1104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF177","HCSMMF216","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.186 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD18240R\r
17-02-28 20:13:14.205 -08 000000029 INF: FPGA: Recv TDIBB
17-02-28 20:13:14.206 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:14.207 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.207 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:14.207 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:14.207 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:14.207 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:14.207 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:14.207 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.208 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":2,"Tile":1109,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF275","HCSMMF222","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.209 -08 000000038 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:14.209 -08 000000038 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:14.209 -08 000000038 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:14.211 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":2,"Tile":1105,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF256","HCSMMF199","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.213 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":2,"Tile":1110,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF285","HCSMMF179","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.222 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":2,"Tile":1103,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF206","HCSMMF238","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.224 -08 000000110 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":2,"Tile":1111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF180","HCSMMF242","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.245 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":2,"Tile":1106,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF240","HCSMMF286","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.246 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":2,"Tile":1108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF220","HCSMMF283","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.247 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":2,"Tile":1113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF278","HCSMMF248","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.248 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":2,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF258","HCSMMF197","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.249 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":2,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF214","HCSMMF183","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.250 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":2,"Tile":1114,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF277","HCSMMF190","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.251 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":2,"Tile":1116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF236","HCSMMF203","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.252 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":2,"Tile":1126,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF284","HCSMMF239","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.253 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":2,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF194","HCSMMF262","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.253 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":2,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF224","HCSMMF187","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.254 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":2,"Tile":1119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF195","HCSMMF273","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.255 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":2,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF235","HCSMMF181","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.256 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":2,"Tile":1120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF274","HCSMMF250","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.257 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":2,"Tile":1122,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF184","HCSMMF207","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.257 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":2,"Tile":1118,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF219","HCSMMF176","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.259 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":2,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF226","HCSMMF210","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.260 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":2,"Tile":1121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF287","HCSMMF198","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.261 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":2,"Tile":1117,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF251","HCSMMF233","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.263 -08 000000109 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:14.263 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":2,"Tile":1128,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF241","HCSMMF252","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:14.263 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.265 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.265 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:14.265 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:14.265 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:14.265 -08 000000038 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Moving to 9.4693 mm @15.000 mm/sec, started at 8.3726 mm
17-02-28 20:13:14.265 -08 000000074 INF: X Motor: Xmit MA -20288\n
17-02-28 20:13:14.265 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.267 -08 000000038 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:14.267 -08 000000038 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:14.267 -08 000000038 INF: Z Motor: Arming to move to -0.0756 mm
17-02-28 20:13:14.267 -08 000000038 INF: FPGA: Xmit ZYT 6427390 4\n
17-02-28 20:13:14.271 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:13:14.326 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:13:14.326 -08 000000038 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482316 enc / 14.823 mm / ) = 6427390 enc / 64.274 mm
17-02-28 20:13:14.326 -08 000000038 INF: FPGA: Xmit ZARM 19815\n
17-02-28 20:13:14.327 -08 000000074 INF: X Motor: Recv MA -20288\r\n>
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:14.327 -08 000000074 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Set target position to 5947390 encoder counts
17-02-28 20:13:14.327 -08 000000030 INF: Y Motor: Xmit s r0xca 5947390\r
17-02-28 20:13:14.365 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:14.375 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.375 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:13:14.387 -08 000000053 INF: FPGA: Recv ZARM
17-02-28 20:13:14.387 -08 000000038 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0425 ms
17-02-28 20:13:14.387 -08 000000038 INF: Z Motor: ArmAbsStepped took 119.6455 ms
17-02-28 20:13:14.387 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:14.389 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.389 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.389 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:13:14.389 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:14.390 -08 000000038 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:14.391 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.392 -08 000000038 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:14.392 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:13:14.394 -08 000000038 INF: ======================================
17-02-28 20:13:14.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:14.451 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:14.451 -08 000000030 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:13:14.451 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.463 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.469 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:13:14.575 -08 000000030 INF: Y Motor: Unshifted Position: 1063507
17-02-28 20:13:14.625 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.640 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.646 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:13:14.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:14.724 -08 000000095 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:14.725 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:14.725 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:14.740 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:14.742 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:14.749 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.763 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:14.769 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.774 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:13:14.865 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:14.889 -08 000000030 INF: Y Motor: Unshifted Position: 1773980
17-02-28 20:13:14.939 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:14.950 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:15.012 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:15.012 -08 000000074 INF: X Motor: Moved to 9.4688 after 685 ms
17-02-28 20:13:15.012 -08 000000074 INF: ======================================
17-02-28 20:13:15.013 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.062 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.073 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:15.152 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:13:15.199 -08 000000030 INF: Y Motor: Unshifted Position: 2546488
17-02-28 20:13:15.249 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.323 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.335 -08 000000095 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:15.335 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:15.335 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:15.350 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:15.352 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:13:15.353 -08 000000095 INF: ======================================
17-02-28 20:13:15.354 -08 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:15.355 -08 000000078 INF: ======================================
17-02-28 20:13:15.373 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.389 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:15.512 -08 000000030 INF: Y Motor: Unshifted Position: 3332282
17-02-28 20:13:15.562 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.639 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.687 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.697 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:15.825 -08 000000030 INF: Y Motor: Unshifted Position: 4108198
17-02-28 20:13:15.875 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:15.947 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:15.999 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:16.135 -08 000000030 INF: Y Motor: Unshifted Position: 4890615
17-02-28 20:13:16.185 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.261 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:16.311 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.324 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:16.450 -08 000000030 INF: Y Motor: Unshifted Position: 5667874
17-02-28 20:13:16.500 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.574 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:16.624 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:16.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:16.760 -08 000000030 INF: Y Motor: Unshifted Position: 5947392
17-02-28 20:13:16.760 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:16.760 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:16.822 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:16.822 -08 000000030 INF: Y Motor: Moved to 64.4739 after 2370 ms
17-02-28 20:13:16.822 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:16.884 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:16.884 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:16.884 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:16.885 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:16.948 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:16.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (8)===================
17-02-28 20:13:16.948 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:13:16.951 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:16.951 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:16.951 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:17.011 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:17.073 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:17.135 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.135 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:17.135 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:17.197 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.197 -08 000000030 INF: ======================================
17-02-28 20:13:17.198 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:13:17.200 -08 000000037 INF: ======================================
17-02-28 20:13:17.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:17.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:17.201 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:17.202 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:17.259 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.259 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:17.319 -08 000000058 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:17.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:17.320 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:17.320 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:17.383 -08 000000044 INF: FPGA: Recv TDIYERD 6447392
17-02-28 20:13:17.383 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447392 counts (64.474 mm)
17-02-28 20:13:17.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:17.384 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:17.385 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:17.385 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:17.385 -08 000000089 INF: ======================================
17-02-28 20:13:17.385 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:17.386 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:17.386 -08 000000095 INF: FPGA: Xmit TDIYPOS 6336465\n
17-02-28 20:13:17.444 -08 000000058 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:17.444 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:17.446 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:17.446 -08 000000095 INF: FPGA: Xmit TDIYARM3 139264 6427390 1 1\n
17-02-28 20:13:17.506 -08 000000062 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:17.506 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:17.508 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:17.509 -08 000000095 INF: ======================================
17-02-28 20:13:17.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:17.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:17.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.512 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.512 -08 000000046 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:17.513 -08 000000032 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:17.513 -08 000000046 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:17.513 -08 000000046 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:17.513 -08 000000032 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:17.513 -08 000000032 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:17.513 -08 000000032 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:17.513 -08 000000032 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:17.513 -08 000000046 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:17.514 -08 000000046 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:17.886 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:13:17.886 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:13:17.886 -08 000000046 INF: Excitation Filter 2: Moved -107 steps in 373.7185 ms
17-02-28 20:13:17.887 -08 000000032 INF: Excitation Filter 1: Moved -107 steps in 373.7029 ms
17-02-28 20:13:17.887 -08 000000046 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 373.8873 ms
17-02-28 20:13:17.887 -08 000000046 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 373.9961 ms
17-02-28 20:13:17.887 -08 000000032 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 373.8298 ms
17-02-28 20:13:17.887 -08 000000032 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 374.0401 ms
17-02-28 20:13:17.887 -08 000000046 INF: ======================================
17-02-28 20:13:17.887 -08 000000032 INF: ======================================
17-02-28 20:13:17.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:17.890 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:13:17.890 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:17.890 -08 000000095 INF: ===================FPGA Z Wait===================
17-02-28 20:13:17.890 -08 000000085 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:17.890 -08 000000095 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:17.891 -08 000000085 INF: Y Motor: Moving to 14.8256 mm @6.500 mm/sec, started at 64.4739 mm
17-02-28 20:13:17.891 -08 000000085 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:17.891 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:17.891 -08 000000098 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:17.891 -08 000000087 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:17.892 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:13:17.892 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:13:17.892 -08 000000087 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:17.893 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:17.894 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:17.894 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:17.894 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:17.945 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:17.945 -08 000000085 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:17.945 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:18.010 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:18.010 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:18.044 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.044 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.044 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.044 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.048 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Set target position to 982556 encoder counts
17-02-28 20:13:18.072 -08 000000085 INF: Y Motor: Xmit s r0xca 982556\r
17-02-28 20:13:18.133 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:18.134 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:18.134 -08 000000085 INF: Y Motor: Start the move command
17-02-28 20:13:18.134 -08 000000085 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:18.194 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.194 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:18.194 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.194 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:18.196 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:18.196 -08 000000085 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:18.196 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.233 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:18.257 -08 000000057 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:18.258 -08 000000095 INF: ======================================
17-02-28 20:13:18.318 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:18.319 -08 000000085 INF: Y Motor: Unshifted Position: 5883581
17-02-28 20:13:18.344 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:18.344 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:18.344 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:18.344 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:18.344 -08 000000058 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:18.344 -08 000000089 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:18.369 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.496 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.517 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:18.517 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:18.517 -08 000000089 INF: ===================Camera #0 Frame #11===================
17-02-28 20:13:18.519 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:18.519 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:18.519 -08 000000058 INF: ===================Camera #2 Frame #11===================
17-02-28 20:13:18.568 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:18.633 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:18.633 -08 000000085 INF: Y Motor: Unshifted Position: 5682088
17-02-28 20:13:18.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:18.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:13:18.683 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.690 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:18.690 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:18.690 -08 000000058 INF: ===================Camera #2 Frame #17===================
17-02-28 20:13:18.694 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:13:18.694 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:13:18.694 -08 000000089 INF: ===================Camera #0 Frame #18===================
17-02-28 20:13:18.806 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:18.862 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:13:18.862 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:13:18.862 -08 000000058 INF: ===================Camera #2 Frame #24===================
17-02-28 20:13:18.866 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:13:18.866 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:13:18.866 -08 000000089 INF: ===================Camera #0 Frame #24===================
17-02-28 20:13:18.945 -08 000000085 INF: Y Motor: Unshifted Position: 5479078
17-02-28 20:13:18.995 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.006 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-02-28 20:13:19.040 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:13:19.040 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:13:19.040 -08 000000089 INF: ===================Camera #0 Frame #30===================
17-02-28 20:13:19.046 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:13:19.046 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:13:19.046 -08 000000058 INF: ===================Camera #2 Frame #31===================
17-02-28 20:13:19.119 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.209 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:19.209 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:19.209 -08 000000089 INF: ===================Camera #0 Frame #37===================
17-02-28 20:13:19.223 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:19.223 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:19.223 -08 000000058 INF: ===================Camera #2 Frame #37===================
17-02-28 20:13:19.255 -08 000000085 INF: Y Motor: Unshifted Position: 5277571
17-02-28 20:13:19.305 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:13:19.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.380 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.380 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:19.390 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:13:19.390 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:13:19.390 -08 000000089 INF: ===================Camera #0 Frame #43===================
17-02-28 20:13:19.401 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:13:19.401 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:13:19.401 -08 000000058 INF: ===================Camera #2 Frame #44===================
17-02-28 20:13:19.432 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.443 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:19.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-02-28 20:13:19.443 -08 000000042 INF: Valve B1: Go to position 7
17-02-28 20:13:19.443 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:13:19.505 -08 000000042 INF: Valve B1: 67.389 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:13:19.505 -08 000000042 INF: Valve B1: Taking shortest path 'CC' from 8 to 7
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC7\r
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:13:19.505 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:19.567 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:13:19.567 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:13:19.567 -08 000000089 INF: ===================Camera #0 Frame #50===================
17-02-28 20:13:19.568 -08 000000085 INF: Y Motor: Unshifted Position: 5073907
17-02-28 20:13:19.578 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:13:19.578 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:13:19.578 -08 000000058 INF: ===================Camera #2 Frame #50===================
17-02-28 20:13:19.618 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.739 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:13:19.739 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:13:19.739 -08 000000089 INF: ===================Camera #0 Frame #56===================
17-02-28 20:13:19.742 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:19.747 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:13:19.747 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:13:19.747 -08 000000058 INF: ===================Camera #2 Frame #56===================
17-02-28 20:13:19.756 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 7\r
17-02-28 20:13:19.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:19.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:13:19.881 -08 000000085 INF: Y Motor: Unshifted Position: 4870456
17-02-28 20:13:19.916 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:13:19.916 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:13:19.916 -08 000000089 INF: ===================Camera #0 Frame #63===================
17-02-28 20:13:19.926 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:13:19.926 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:13:19.926 -08 000000058 INF: ===================Camera #2 Frame #63===================
17-02-28 20:13:19.931 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.062 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.096 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:13:20.096 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:13:20.096 -08 000000089 INF: ===================Camera #0 Frame #69===================
17-02-28 20:13:20.109 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:13:20.109 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:13:20.109 -08 000000058 INF: ===================Camera #2 Frame #70===================
17-02-28 20:13:20.191 -08 000000085 INF: Y Motor: Unshifted Position: 4668740
17-02-28 20:13:20.241 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.265 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:13:20.265 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:13:20.265 -08 000000089 INF: ===================Camera #0 Frame #75===================
17-02-28 20:13:20.286 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:13:20.286 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:13:20.286 -08 000000058 INF: ===================Camera #2 Frame #76===================
17-02-28 20:13:20.369 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.434 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:13:20.434 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:13:20.434 -08 000000089 INF: ===================Camera #0 Frame #82===================
17-02-28 20:13:20.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:20.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:20.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:20.456 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:13:20.456 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:13:20.456 -08 000000058 INF: ===================Camera #2 Frame #82===================
17-02-28 20:13:20.504 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:20.505 -08 000000085 INF: Y Motor: Unshifted Position: 4464624
17-02-28 20:13:20.512 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:13:20.555 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.604 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:20.606 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:13:20.606 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:13:20.606 -08 000000089 INF: ===================Camera #0 Frame #88===================
17-02-28 20:13:20.625 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:13:20.625 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:13:20.625 -08 000000058 INF: ===================Camera #2 Frame #89===================
17-02-28 20:13:20.679 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.690 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:13:20.690 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:13:20.775 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:13:20.775 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:13:20.775 -08 000000089 INF: ===================Camera #0 Frame #94===================
17-02-28 20:13:20.790 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:13:20.797 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:13:20.797 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:13:20.797 -08 000000058 INF: ===================Camera #2 Frame #95===================
17-02-28 20:13:20.815 -08 000000085 INF: Y Motor: Unshifted Position: 4262917
17-02-28 20:13:20.865 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:20.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:20.944 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:13:20.944 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:13:20.944 -08 000000089 INF: ===================Camera #0 Frame #100===================
17-02-28 20:13:20.967 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:13:20.967 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:13:20.967 -08 000000058 INF: ===================Camera #2 Frame #101===================
17-02-28 20:13:20.979 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:20.992 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.067 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:21.112 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:13:21.112 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:13:21.112 -08 000000089 INF: ===================Camera #0 Frame #107===================
17-02-28 20:13:21.129 -08 000000085 INF: Y Motor: Unshifted Position: 4058160
17-02-28 20:13:21.137 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:13:21.137 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:13:21.137 -08 000000058 INF: ===================Camera #2 Frame #108===================
17-02-28 20:13:21.179 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.284 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:13:21.284 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:13:21.284 -08 000000089 INF: ===================Camera #0 Frame #113===================
17-02-28 20:13:21.302 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.309 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:13:21.309 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:13:21.309 -08 000000058 INF: ===================Camera #2 Frame #114===================
17-02-28 20:13:21.317 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:21.378 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:21.441 -08 000000085 INF: Y Motor: Unshifted Position: 3855792
17-02-28 20:13:21.453 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:13:21.453 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:13:21.453 -08 000000089 INF: ===================Camera #0 Frame #119===================
17-02-28 20:13:21.478 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:13:21.478 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:13:21.478 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:13:21.478 -08 000000058 INF: ===================Camera #2 Frame #120===================
17-02-28 20:13:21.491 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.564 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:21.615 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.622 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:13:21.622 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:13:21.622 -08 000000089 INF: ===================Camera #0 Frame #125===================
17-02-28 20:13:21.648 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:13:21.648 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:13:21.648 -08 000000058 INF: ===================Camera #2 Frame #126===================
17-02-28 20:13:21.664 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:21.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:21.750 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:13:21.751 -08 000000085 INF: Y Motor: Unshifted Position: 3654291
17-02-28 20:13:21.791 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:13:21.791 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:13:21.791 -08 000000089 INF: ===================Camera #0 Frame #132===================
17-02-28 20:13:21.801 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.817 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:13:21.817 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:13:21.817 -08 000000058 INF: ===================Camera #2 Frame #133===================
17-02-28 20:13:21.850 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP11904R\r
17-02-28 20:13:21.926 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:21.940 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:21.963 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:13:21.963 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:13:21.963 -08 000000089 INF: ===================Camera #0 Frame #138===================
17-02-28 20:13:21.990 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:13:21.990 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:13:21.990 -08 000000058 INF: ===================Camera #2 Frame #139===================
17-02-28 20:13:22.040 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:22.065 -08 000000085 INF: Y Motor: Unshifted Position: 3450616
17-02-28 20:13:22.115 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.127 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:22.132 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:13:22.132 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:13:22.132 -08 000000089 INF: ===================Camera #0 Frame #144===================
17-02-28 20:13:22.159 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:13:22.159 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:13:22.159 -08 000000058 INF: ===================Camera #2 Frame #145===================
17-02-28 20:13:22.240 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.300 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:13:22.300 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:13:22.300 -08 000000089 INF: ===================Camera #0 Frame #150===================
17-02-28 20:13:22.328 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:13:22.328 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:13:22.328 -08 000000058 INF: ===================Camera #2 Frame #151===================
17-02-28 20:13:22.377 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:22.378 -08 000000085 INF: Y Motor: Unshifted Position: 3247176
17-02-28 20:13:22.428 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.438 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:22.470 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:13:22.470 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:13:22.471 -08 000000089 INF: ===================Camera #0 Frame #157===================
17-02-28 20:13:22.497 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:13:22.497 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:13:22.497 -08 000000058 INF: ===================Camera #2 Frame #158===================
17-02-28 20:13:22.551 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.642 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:13:22.642 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:13:22.642 -08 000000089 INF: ===================Camera #0 Frame #163===================
17-02-28 20:13:22.669 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:13:22.669 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:13:22.669 -08 000000058 INF: ===================Camera #2 Frame #164===================
17-02-28 20:13:22.688 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:22.690 -08 000000085 INF: Y Motor: Unshifted Position: 3044165
17-02-28 20:13:22.740 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.751 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:22.811 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:13:22.811 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:13:22.811 -08 000000089 INF: ===================Camera #0 Frame #169===================
17-02-28 20:13:22.838 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:13:22.838 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:13:22.838 -08 000000058 INF: ===================Camera #2 Frame #170===================
17-02-28 20:13:22.864 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:22.979 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:13:22.979 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:13:22.979 -08 000000089 INF: ===================Camera #0 Frame #175===================
17-02-28 20:13:23.000 -08 000000085 INF: Y Motor: Unshifted Position: 2841366
17-02-28 20:13:23.001 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.007 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:13:23.007 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:13:23.007 -08 000000058 INF: ===================Camera #2 Frame #176===================
17-02-28 20:13:23.050 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:23.147 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:13:23.147 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:13:23.147 -08 000000089 INF: ===================Camera #0 Frame #182===================
17-02-28 20:13:23.174 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.176 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:13:23.176 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:13:23.176 -08 000000058 INF: ===================Camera #2 Frame #183===================
17-02-28 20:13:23.311 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.311 -08 000000085 INF: Y Motor: Unshifted Position: 2637694
17-02-28 20:13:23.318 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:13:23.318 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:13:23.318 -08 000000089 INF: ===================Camera #0 Frame #188===================
17-02-28 20:13:23.348 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:13:23.348 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:13:23.348 -08 000000058 INF: ===================Camera #2 Frame #189===================
17-02-28 20:13:23.361 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.375 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:23.486 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:13:23.486 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:13:23.486 -08 000000089 INF: ===================Camera #0 Frame #194===================
17-02-28 20:13:23.487 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.517 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:13:23.517 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:13:23.517 -08 000000058 INF: ===================Camera #2 Frame #195===================
17-02-28 20:13:23.625 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.625 -08 000000085 INF: Y Motor: Unshifted Position: 2436642
17-02-28 20:13:23.654 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:13:23.654 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:13:23.654 -08 000000089 INF: ===================Camera #0 Frame #200===================
17-02-28 20:13:23.675 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.686 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:23.686 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:13:23.686 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:13:23.686 -08 000000058 INF: ===================Camera #2 Frame #201===================
17-02-28 20:13:23.800 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.822 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:13:23.822 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:13:23.822 -08 000000089 INF: ===================Camera #0 Frame #206===================
17-02-28 20:13:23.855 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:13:23.855 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:13:23.855 -08 000000058 INF: ===================Camera #2 Frame #208===================
17-02-28 20:13:23.936 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:23.937 -08 000000085 INF: Y Motor: Unshifted Position: 2232540
17-02-28 20:13:23.987 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:23.990 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:13:23.990 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:13:23.990 -08 000000089 INF: ===================Camera #0 Frame #213===================
17-02-28 20:13:23.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:24.027 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:13:24.027 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:13:24.027 -08 000000058 INF: ===================Camera #2 Frame #214===================
17-02-28 20:13:24.110 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.161 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:13:24.161 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:13:24.161 -08 000000089 INF: ===================Camera #0 Frame #219===================
17-02-28 20:13:24.196 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:13:24.196 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:13:24.196 -08 000000058 INF: ===================Camera #2 Frame #220===================
17-02-28 20:13:24.248 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:24.248 -08 000000085 INF: Y Motor: Unshifted Position: 2030173
17-02-28 20:13:24.298 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.311 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:24.329 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:13:24.329 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:13:24.329 -08 000000089 INF: ===================Camera #0 Frame #225===================
17-02-28 20:13:24.365 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:13:24.365 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:13:24.365 -08 000000058 INF: ===================Camera #2 Frame #226===================
17-02-28 20:13:24.422 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.497 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:13:24.497 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:13:24.497 -08 000000089 INF: ===================Camera #0 Frame #231===================
17-02-28 20:13:24.535 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:13:24.535 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:13:24.535 -08 000000058 INF: ===================Camera #2 Frame #233===================
17-02-28 20:13:24.561 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:24.561 -08 000000085 INF: Y Motor: Unshifted Position: 1826718
17-02-28 20:13:24.611 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:24.665 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:13:24.665 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:13:24.665 -08 000000089 INF: ===================Camera #0 Frame #237===================
17-02-28 20:13:24.707 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:13:24.707 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:13:24.707 -08 000000058 INF: ===================Camera #2 Frame #239===================
17-02-28 20:13:24.735 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.833 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:13:24.833 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:13:24.833 -08 000000089 INF: ===================Camera #0 Frame #244===================
17-02-28 20:13:24.872 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:24.873 -08 000000085 INF: Y Motor: Unshifted Position: 1623921
17-02-28 20:13:24.876 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:13:24.876 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:13:24.876 -08 000000058 INF: ===================Camera #2 Frame #245===================
17-02-28 20:13:24.923 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:24.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.004 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:13:25.004 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:13:25.004 -08 000000089 INF: ===================Camera #0 Frame #250===================
17-02-28 20:13:25.045 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:13:25.045 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:13:25.045 -08 000000058 INF: ===================Camera #2 Frame #251===================
17-02-28 20:13:25.048 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.172 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:13:25.172 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:13:25.172 -08 000000089 INF: ===================Camera #0 Frame #256===================
17-02-28 20:13:25.184 -08 000000085 INF: Y Motor: Unshifted Position: 1421548
17-02-28 20:13:25.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:25.214 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:13:25.214 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:13:25.214 -08 000000058 INF: ===================Camera #2 Frame #258===================
17-02-28 20:13:25.234 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.340 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:13:25.340 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:13:25.340 -08 000000089 INF: ===================Camera #0 Frame #262===================
17-02-28 20:13:25.358 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.386 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:13:25.386 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:13:25.386 -08 000000058 INF: ===================Camera #2 Frame #264===================
17-02-28 20:13:25.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:25.496 -08 000000085 INF: Y Motor: Unshifted Position: 1218526
17-02-28 20:13:25.510 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:13:25.510 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:13:25.510 -08 000000089 INF: ===================Camera #0 Frame #269===================
17-02-28 20:13:25.546 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.557 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:13:25.557 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:13:25.557 -08 000000058 INF: ===================Camera #2 Frame #270===================
17-02-28 20:13:25.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.619 -08 000000109 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:25.619 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:25.621 -08 000000087 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:25.622 -08 000000064 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:25.622 -08 000000076 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:25.622 -08 000000064 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:25.622 -08 000000064 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:25.622 -08 000000064 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:25.622 -08 000000064 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:25.622 -08 000000076 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:25.622 -08 000000076 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:25.622 -08 000000076 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:25.625 -08 000000076 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:25.671 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.683 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:25.683 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:25.683 -08 000000089 INF: ===================Camera #0 Frame #272===================
17-02-28 20:13:25.693 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:25.694 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:25.809 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:25.809 -08 000000085 INF: Y Motor: Unshifted Position: 1016383
17-02-28 20:13:25.827 -08 000000089 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:25.827 -08 000000058 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:25.827 -08 000000058 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:25.827 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:13:25.827 -08 000000058 INF: ===================Camera #2 Frame #272===================
17-02-28 20:13:25.834 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:25.835 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:25.858 -08 000000089 INF: ======================================
17-02-28 20:13:25.859 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:25.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:25.994 -08 000000054 INF: FPGA: Recv EX1MV
17-02-28 20:13:25.994 -08 000000054 INF: FPGA: Recv EX2MV
17-02-28 20:13:25.994 -08 000000076 INF: Excitation Filter 2: Moved 107 steps in 371.7105 ms
17-02-28 20:13:25.994 -08 000000064 INF: Excitation Filter 1: Moved 107 steps in 371.8812 ms
17-02-28 20:13:25.994 -08 000000076 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8253 ms
17-02-28 20:13:25.994 -08 000000076 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9401 ms
17-02-28 20:13:25.994 -08 000000064 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.02 ms
17-02-28 20:13:25.994 -08 000000064 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1986 ms
17-02-28 20:13:25.994 -08 000000076 INF: ======================================
17-02-28 20:13:25.994 -08 000000064 INF: ======================================
17-02-28 20:13:25.996 -08 000000085 INF: Y Motor: Unshifted Position: 982557
17-02-28 20:13:25.996 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:25.996 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:25.996 -08 000000087 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:25.997 -08 000000087 INF: ======================================
17-02-28 20:13:26.004 -08 000000058 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:26.004 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:13:26.039 -08 000000058 INF: ======================================
17-02-28 20:13:26.040 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:13:26.041 -08 000000098 INF: ======================================
17-02-28 20:13:26.059 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:26.059 -08 000000085 INF: Y Motor: Moved to 14.8256 after 7863 ms
17-02-28 20:13:26.059 -08 000000085 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:26.120 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:26.122 -08 000000085 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:26.122 -08 000000085 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:26.122 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:26.182 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:26.183 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:26.183 -08 000000085 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:26.183 -08 000000085 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:26.245 -08 000000085 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:26.307 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:26.355 -08 000000051 INF: RunCopyService queue size at 2/28/2017 8:13:26 PM is 2
17-02-28 20:13:26.372 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:26.372 -08 000000085 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:26.372 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:26.448 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:26.451 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:13:26.451 -08 000000085 INF: ======================================
17-02-28 20:13:26.453 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:26.454 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:26.455 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.455 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:26.510 -08 000000074 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:26.510 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:26.513 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:26.573 -08 000000047 INF: FPGA: Recv TDIYERD 1482557
17-02-28 20:13:26.574 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:26.636 -08 000000102 INF: FPGA: Recv ZADCR 29177
17-02-28 20:13:26.636 -08 000000018 INF: At scan end Y pos = 14.826 and Z pos = -0.112. Y moved -48.539 mm
17-02-28 20:13:26.636 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:26.695 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:13:26.695 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:13:26.695 -08 000000018 INF: TDIScan finished after 12662.9557 ms
17-02-28 20:13:26.695 -08 000000018 INF: Image[0]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:26.695 -08 000000018 INF: Image[2]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:26.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.731 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.890 um
17-02-28 20:13:26.731 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.732 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:26.760 -08 000000034 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:26.761 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:26.761 -08 000000098 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:26.761 -08 000000055 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:26.761 -08 000000076 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:26.762 -08 000000047 INF: ===================Dither Clean Up Command===================
17-02-28 20:13:26.762 -08 000000055 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:26.762 -08 000000055 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:26.762 -08 000000098 INF: ======================================
17-02-28 20:13:26.762 -08 000000076 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:26.762 -08 000000076 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:26.762 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:26.762 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:26.763 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:26.763 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:13:26.766 -08 000000057 INF: ===================LFT:Extracting coords===================
17-02-28 20:13:26.791 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:26.791 -08 000000057 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:13:26.792 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.792 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:13:26.793 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.793 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.793 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.793 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:26.822 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:26.822 -08 000000104 INF: FPGA: Recv ZSEL 
17-02-28 20:13:26.822 -08 000000058 INF: FPGA: Xmit ZDACW 30300\n
17-02-28 20:13:26.822 -08 000000076 INF: ======================================
17-02-28 20:13:26.823 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:26.824 -08 000000055 INF: Y Motor: Recv ok\r
17-02-28 20:13:26.824 -08 000000055 INF: ======================================
17-02-28 20:13:26.867 -08 000000032 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.867 -08 000000046 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.867 -08 000000050 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.868 -08 000000066 INF: FC:A, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:26.885 -08 000000102 INF: FPGA: Recv ZDACW 
17-02-28 20:13:26.885 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:13:26.886 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:13:26.946 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:13:26.946 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:26.947 -08 000000058 INF: ======================================
17-02-28 20:13:27.018 -08 000000046 INF: LFT found best fwhm score 2.000585 in 151 ms
17-02-28 20:13:27.018 -08 000000032 INF: LFT found best fwhm score 2.000048 in 151 ms
17-02-28 20:13:27.018 -08 000000032 INF: LFT found good score at index 7345 with fwhm value 2.000048. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.018 -08 000000050 INF: LFT found best fwhm score 2.000367 in 151 ms
17-02-28 20:13:27.019 -08 000000050 INF: LFT found good score at index 6325 with fwhm value 2.000367. Next cycle, cycle 4 starting Z position for top surface is at -0.118 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.019 -08 000000046 INF: LFT found good score at index 189 with fwhm value 2.000585. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.019 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000066 INF: LFT found best fwhm score 2.272618 in 151 ms
17-02-28 20:13:27.019 -08 000000066 INF: LFT found good score at index 3013 with fwhm value 2.272618. Next cycle, cycle 4 starting Z position for top surface is at -0.119 mm FC:A, C:3,L:2,T
17-02-28 20:13:27.019 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000032 INF: ======================================
17-02-28 20:13:27.019 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:13:27.019 -08 000000050 INF: ======================================
17-02-28 20:13:27.019 -08 000000046 INF: ======================================
17-02-28 20:13:27.019 -08 000000066 INF: ======================================
17-02-28 20:13:27.020 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:27.021 -08 000000057 INF: LFT weighted average best Z for top surface is at -0.118mm FC:A, C:3,L:2,T
17-02-28 20:13:27.021 -08 000000057 INF: ======================================
17-02-28 20:13:27.023 -08 000000047 INF: ======================================
17-02-28 20:13:27.024 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.024 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:27.025 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:27.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:27.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 9.457931 Y = 39.70011===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:13:27.027 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:13:27.050 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:13:27.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:27.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:27.050 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.051 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:13:27.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:13:27.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:13:27.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.069 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.069 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:27.069 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:27.120 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":2,"Tile":1207,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF219","HCSMMF237","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.140 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:27.159 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:27.160 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.161 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:13:27.161 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:13:27.199 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:27.246 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":2,"Tile":1202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF205","HCSMMF282","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.247 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":2,"Tile":1209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF190","HCSMMF277","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.248 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":2,"Tile":1206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF232","HCSMMF275","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.250 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":2,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF248","HCSMMF178","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.251 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":2,"Tile":1205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF251","HCSMMF258","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.252 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":2,"Tile":1215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF284","HCSMMF221","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.253 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":2,"Tile":1204,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF279","HCSMMF269","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.254 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":2,"Tile":1201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF287","HCSMMF210","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.254 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":2,"Tile":1213,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF247","HCSMMF220","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.255 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":2,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF260","HCSMMF187","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.256 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":2,"Tile":1212,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF200","HCSMMF229","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.257 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":2,"Tile":1217,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF256","HCSMMF201","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.257 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":2,"Tile":1222,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF215","HCSMMF257","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.258 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":2,"Tile":1203,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF253","HCSMMF245","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.259 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":2,"Tile":1210,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF216","HCSMMF177","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.259 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":2,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF230","HCSMMF280","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.260 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":2,"Tile":1211,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF231","HCSMMF212","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.261 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":2,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF218","HCSMMF207","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.262 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":2,"Tile":1225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF182","HCSMMF185","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.263 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":2,"Tile":1228,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF186","HCSMMF268","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.263 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":2,"Tile":1221,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF183","HCSMMF276","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.264 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":2,"Tile":1224,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF259","HCSMMF255","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.266 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":2,"Tile":1223,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF271","HCSMMF270","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.266 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":2,"Tile":1208,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF209","HCSMMF265","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.268 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":2,"Tile":1227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF285","HCSMMF196","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.269 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":2,"Tile":1219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF195","HCSMMF261","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.271 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":2,"Tile":1220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF199","HCSMMF242","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:27.273 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.279 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:13:27.366 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.366 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:13:27.403 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.409 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:13:27.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:27.507 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:27.511 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.517 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:13:27.555 -08 000000062 INF: FPGA: Recv MIOCOMPR
17-02-28 20:13:27.555 -08 000000018 INF: Compensator: Moved OutOfPath in 394 ms
17-02-28 20:13:27.555 -08 000000018 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:13:27.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.556 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.557 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:13:27.557 -08 000000104 INF: ===================Move Tilt Motor 3===================
17-02-28 20:13:27.557 -08 000000052 INF: ===================Move Tilt Motor 1===================
17-02-28 20:13:27.557 -08 000000109 INF: ======================================
17-02-28 20:13:27.557 -08 000000052 INF: ======================================
17-02-28 20:13:27.558 -08 000000104 INF: ======================================
17-02-28 20:13:27.558 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:27.566 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:13:27.575 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:13:27.575 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:13:27.575 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:13:27.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.580 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:13:27.580 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:13:27.580 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:13:27.609 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.615 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:13:27.618 -08 000000050 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:27.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.619 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:27.619 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1156 mm
17-02-28 20:13:27.619 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:13:27.679 -08 000000110 INF: FPGA: Recv ZTRG 
17-02-28 20:13:27.679 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:13:27.710 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:27.740 -08 000000032 INF: FPGA: Recv ZYT 
17-02-28 20:13:27.740 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:13:27.740 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:13:27.757 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:27.804 -08 000000095 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:13:27.804 -08 000000095 INF: FPGA: Recv ZMV 
17-02-28 20:13:27.804 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.066 ms
17-02-28 20:13:27.804 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:13:27.804 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:13:27.820 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:27.867 -08 000000057 INF: FPGA: Recv ZDACR 60292
17-02-28 20:13:27.867 -08 000000018 INF: Z Motor: MoveAndTrigger took 248.3826 ms w/comms
17-02-28 20:13:27.867 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:27.867 -08 000000018 INF: Z Motor: MoveAbsStepped took 248.6066 ms
17-02-28 20:13:27.868 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.868 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.877 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:13:27.877 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:13:27.928 -08 000000044 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:27.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:27.939 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:13:27.947 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:13:27.947 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.947 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:13:27.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:27.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:27.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:27.950 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:13:27.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:27.951 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:27.951 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:27.951 -08 000000100 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:27.952 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:27.952 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:27.952 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:27.952 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:27.953 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:27.953 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:13:27.953 -08 000000076 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:27.953 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:27.953 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:27.953 -08 000000076 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8256 mm
17-02-28 20:13:27.953 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:27.953 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:27.953 -08 000000076 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:27.953 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:27.954 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:27.954 -08 000000057 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:27.954 -08 000000101 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:27.954 -08 000000106 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:27.954 -08 000000029 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:27.954 -08 000000104 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:27.954 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:27.954 -08 000000034 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:27.955 -08 000000057 INF: ======================================
17-02-28 20:13:27.955 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:27.955 -08 000000034 INF: ======================================
17-02-28 20:13:27.955 -08 000000085 INF: ======================================
17-02-28 20:13:27.955 -08 000000101 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:27.956 -08 000000106 INF: ======================================
17-02-28 20:13:27.956 -08 000000104 INF: ======================================
17-02-28 20:13:27.956 -08 000000101 INF: ======================================
17-02-28 20:13:27.956 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:27.957 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:27.958 -08 000000029 INF: ======================================
17-02-28 20:13:27.958 -08 000000098 INF: ======================================
17-02-28 20:13:27.958 -08 000000062 INF: ======================================
17-02-28 20:13:27.959 -08 000000052 INF: ======================================
17-02-28 20:13:27.959 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:27.959 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:27.960 -08 000000032 INF: ======================================
17-02-28 20:13:27.960 -08 000000109 INF: ======================================
17-02-28 20:13:27.962 -08 000000100 INF: ======================================
17-02-28 20:13:27.995 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:27.995 -08 000000076 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:27.995 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:27.995 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:13:28.009 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:28.009 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:28.055 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:28.055 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:28.070 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Moving to 11.6689 mm @15.000 mm/sec, started at 9.4688 mm
17-02-28 20:13:28.070 -08 000000066 INF: X Motor: Xmit MA -19387\n
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:13:28.119 -08 000000076 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:13:28.133 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:28.134 -08 000000066 INF: X Motor: Recv MA -19387\r\n>
17-02-28 20:13:28.134 -08 000000066 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:13:28.179 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:28.179 -08 000000076 INF: Y Motor: Start the move command
17-02-28 20:13:28.179 -08 000000076 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:28.243 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:28.243 -08 000000076 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:13:28.243 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.368 -08 000000076 INF: Y Motor: Unshifted Position: 1064947
17-02-28 20:13:28.383 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:28.418 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.445 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:28.541 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.680 -08 000000076 INF: Y Motor: Unshifted Position: 1771725
17-02-28 20:13:28.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:28.730 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:28.756 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:28.820 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:28.820 -08 000000066 INF: X Motor: Moved to 11.6685 after 686 ms
17-02-28 20:13:28.820 -08 000000066 INF: ======================================
17-02-28 20:13:28.854 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:28.990 -08 000000076 INF: Y Motor: Unshifted Position: 2560079
17-02-28 20:13:29.005 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.040 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.068 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:29.167 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.303 -08 000000076 INF: Y Motor: Unshifted Position: 3337517
17-02-28 20:13:29.318 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.353 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.381 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:29.479 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.615 -08 000000076 INF: Y Motor: Unshifted Position: 4117590
17-02-28 20:13:29.631 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.665 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.693 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:29.789 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:29.928 -08 000000076 INF: Y Motor: Unshifted Position: 4893367
17-02-28 20:13:29.943 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:29.978 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.102 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.238 -08 000000076 INF: Y Motor: Unshifted Position: 5674307
17-02-28 20:13:30.253 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:30.288 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.316 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.415 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:30.550 -08 000000076 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:13:30.550 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:30.550 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:30.566 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:30.615 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:30.615 -08 000000076 INF: Y Motor: Moved to 64.4706 after 2372 ms
17-02-28 20:13:30.615 -08 000000076 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:30.628 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.677 -08 000000076 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:30.677 -08 000000076 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:30.677 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:30.738 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:30.738 -08 000000076 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:30.738 -08 000000076 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:30.802 -08 000000076 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:30.863 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:30.878 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:30.926 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:30.926 -08 000000076 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:30.926 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:30.941 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:30.987 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:13:30.987 -08 000000076 INF: ======================================
17-02-28 20:13:30.988 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:30.990 -08 000000058 INF: ======================================
17-02-28 20:13:30.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:30.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:30.992 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:13:30.992 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:13:31.051 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:31.051 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:13:31.110 -08 000000034 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:31.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:31.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:31.111 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:31.174 -08 000000081 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:13:31.174 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:13:31.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:31.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:31.176 -08 000000053 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:31.176 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.177 -08 000000053 INF: ======================================
17-02-28 20:13:31.178 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:31.178 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.180 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:13:31.181 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:31.182 -08 000000089 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:13:31.191 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:31.235 -08 000000038 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:31.235 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:13:31.238 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:31.238 -08 000000089 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:13:31.251 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:31.298 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:13:31.299 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:13:31.301 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.303 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:31.303 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:31.306 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:13:31.307 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:13:31.308 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:31.501 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:31.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:31.680 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:13:31.680 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:13:31.680 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:31.695 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:13:31.697 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:31.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:31.878 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.085 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 53821386880 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:13:32.085 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:13:32.085 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:32.100 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:13:32.102 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:13:32.103 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:32.105 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:32.106 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:32.106 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:32.108 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:32.108 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:32.108 -08 000000089 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:13:32.108 -08 000000089 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:13:32.128 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:32.172 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:13:32.172 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:13:32.172 -08 000000089 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:13:32.188 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.233 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:13:32.233 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0451 ms
17-02-28 20:13:32.233 -08 000000089 INF: Z Motor: ArmAbsStepped took 124.6412 ms
17-02-28 20:13:32.233 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:32.235 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:13:32.236 -08 000000089 INF: ======================================
17-02-28 20:13:32.237 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:32.239 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:32.239 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.240 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.242 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:32.242 -08 000000064 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:32.242 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:32.242 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:32.242 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:32.242 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:32.242 -08 000000064 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:32.242 -08 000000064 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:32.242 -08 000000064 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:32.243 -08 000000064 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:32.438 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:32.501 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.610 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:13:32.610 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:13:32.610 -08 000000064 INF: Excitation Filter 1: Moved -107 steps in 368.0381 ms
17-02-28 20:13:32.610 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 368.2491 ms
17-02-28 20:13:32.610 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4102 ms
17-02-28 20:13:32.610 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4859 ms
17-02-28 20:13:32.610 -08 000000064 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.1909 ms
17-02-28 20:13:32.610 -08 000000064 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6007 ms
17-02-28 20:13:32.611 -08 000000038 INF: ======================================
17-02-28 20:13:32.611 -08 000000064 INF: ======================================
17-02-28 20:13:32.612 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.614 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:32.615 -08 000000034 INF: ===================Serial===================
17-02-28 20:13:32.615 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:13:32.615 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:32.616 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:32.616 -08 000000058 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:13:32.616 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:32.616 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:32.616 -08 000000034 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:13:32.616 -08 000000029 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:32.617 -08 000000086 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:32.617 -08 000000034 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:32.618 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:13:32.618 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:13:32.618 -08 000000086 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:32.618 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.619 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.620 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.620 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.672 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.672 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:32.672 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:32.736 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.736 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:32.751 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:32.769 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.769 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.771 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.771 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:13:32.797 -08 000000058 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:13:32.811 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:32.861 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.861 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:13:32.861 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:32.919 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.919 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.921 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:32.921 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:32.922 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:32.922 -08 000000058 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:13:32.922 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.046 -08 000000058 INF: Y Motor: Unshifted Position: 5929031
17-02-28 20:13:33.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:33.069 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:33.069 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:33.071 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:33.071 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:33.096 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.125 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:33.219 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:13:33.219 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:13:33.219 -08 000000095 INF: ===================Camera #0 Frame #1===================
17-02-28 20:13:33.221 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.221 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:13:33.221 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:13:33.221 -08 000000085 INF: ===================Camera #2 Frame #1===================
17-02-28 20:13:33.359 -08 000000058 INF: Y Motor: Unshifted Position: 5882077
17-02-28 20:13:33.372 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:13:33.372 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:13:33.372 -08 000000095 INF: ===================Camera #0 Frame #3===================
17-02-28 20:13:33.374 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:13:33.374 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:13:33.374 -08 000000085 INF: ===================Camera #2 Frame #3===================
17-02-28 20:13:33.375 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:33.409 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.437 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:33.529 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:33.529 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:13:33.529 -08 000000095 INF: ===================Camera #0 Frame #4===================
17-02-28 20:13:33.530 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:33.530 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:13:33.530 -08 000000085 INF: ===================Camera #2 Frame #4===================
17-02-28 20:13:33.533 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.671 -08 000000058 INF: Y Motor: Unshifted Position: 5835229
17-02-28 20:13:33.683 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:33.683 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:33.683 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:33.684 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:33.684 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:33.684 -08 000000095 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:33.687 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:33.721 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.733 -08 000000032 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:33.733 -08 000000034 INF: ===================Serial===================
17-02-28 20:13:33.735 -08 000000034 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:13:33.735 -08 000000034 INF: ===================Serial===================
17-02-28 20:13:33.737 -08 000000034 INF: ======================================
17-02-28 20:13:33.749 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:33.794 -08 000000076 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:33.794 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:33.796 -08 000000086 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:33.797 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:33.797 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:33.797 -08 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:33.797 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:33.797 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:33.797 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:33.797 -08 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:33.797 -08 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:33.797 -08 000000090 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:33.800 -08 000000090 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:33.836 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:13:33.836 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:13:33.836 -08 000000085 INF: ===================Camera #2 Frame #6===================
17-02-28 20:13:33.837 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:13:33.837 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:13:33.837 -08 000000095 INF: ===================Camera #0 Frame #6===================
17-02-28 20:13:33.839 -08 000000085 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:13:33.840 -08 000000095 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:13:33.840 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:33.841 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:33.846 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:33.865 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:33.865 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:13:33.866 -08 000000085 INF: ======================================
17-02-28 20:13:33.889 -08 000000095 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:33.889 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:13:33.890 -08 000000095 INF: ======================================
17-02-28 20:13:33.892 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:13:33.893 -08 000000029 INF: ======================================
17-02-28 20:13:33.984 -08 000000058 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:13:33.999 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.034 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:34.059 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:34.168 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:13:34.168 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 370.9532 ms
17-02-28 20:13:34.168 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.2109 ms
17-02-28 20:13:34.168 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.2851 ms
17-02-28 20:13:34.169 -08 000000050 INF: ======================================
17-02-28 20:13:34.170 -08 000000058 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:13:34.170 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:34.170 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:34.231 -08 000000010 INF: FPGA: Recv EX2MV
17-02-28 20:13:34.231 -08 000000090 INF: Excitation Filter 2: Moved 107 steps in 433.581 ms
17-02-28 20:13:34.231 -08 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 433.7703 ms
17-02-28 20:13:34.231 -08 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 433.8699 ms
17-02-28 20:13:34.232 -08 000000090 INF: ======================================
17-02-28 20:13:34.233 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:34.233 -08 000000058 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:13:34.233 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:34.233 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:34.234 -08 000000086 INF: ======================================
17-02-28 20:13:34.294 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:34.294 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:34.294 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:34.309 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.358 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:34.358 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:34.358 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:34.372 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:34.419 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:34.482 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:34.545 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:34.545 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:34.545 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:34.607 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:13:34.607 -08 000000058 INF: ======================================
17-02-28 20:13:34.608 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:34.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:13:34.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.611 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:34.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.668 -08 000000062 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:34.668 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:34.684 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:34.729 -08 000000010 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:13:34.729 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:34.793 -08 000000066 INF: FPGA: Recv ZADCR 2423
17-02-28 20:13:34.793 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:13:34.793 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:34.856 -08 000000047 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:13:34.856 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:13:34.856 -08 000000018 INF: TDIScan finished after 6918.1567 ms
17-02-28 20:13:34.856 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:13:34.856 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:13:34.857 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:34.917 -08 000000106 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:34.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.919 -08 000000038 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:34.919 -08 000000029 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:34.919 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:34.919 -08 000000029 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:34.919 -08 000000029 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:34.920 -08 000000102 INF: ======================================
17-02-28 20:13:34.920 -08 000000038 INF: ======================================
17-02-28 20:13:34.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:34.980 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:34.980 -08 000000029 INF: ======================================
17-02-28 20:13:34.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.982 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:34.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:34.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:35.045 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.046 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:35.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:35.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:13:35.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.111 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.112 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:13:35.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:13:35.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:13:35.247 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:35.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.557 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:35.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:13:35.772 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0516020684934979Best Z position at top surface = -0.123588684123805Best Z position at top surface + compensator offset = -0.100888684123805 C:3,L:3,T
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.123588684123805
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.7387
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0516020684934979
17-02-28 20:13:35.774 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.39197
17-02-28 20:13:35.774 -08 000000018 INF: Z-height at LaneTopSurface is -0.123588684123805.
17-02-28 20:13:35.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:35.907 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:35.907 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:35.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:35.977 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:35.977 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:13:35.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.979 -08 000000018 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:13:35.979 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.980 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.980 -08 000000037 INF: ===================Move Tilt Motor 2===================
17-02-28 20:13:35.980 -08 000000076 INF: ===================Move Tilt Motor 3===================
17-02-28 20:13:35.981 -08 000000057 INF: ===================Move Tilt Motor 1===================
17-02-28 20:13:35.981 -08 000000037 INF: ======================================
17-02-28 20:13:35.981 -08 000000057 INF: ======================================
17-02-28 20:13:35.982 -08 000000076 INF: ======================================
17-02-28 20:13:35.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.984 -08 000000018 INF: ETF Best Z: -0.1008887 mm (26447 DAC)
17-02-28 20:13:35.984 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:35.985 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:13:35.985 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:13:36.394 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:36.395 -08 000000100 INF: FPGA: Recv MIOCOMPF
17-02-28 20:13:36.395 -08 000000018 INF: Compensator: Moved IntoPath in 409 ms
17-02-28 20:13:36.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:36.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:36.403 -08 000000018 INF: Swath 1 position calculated to be: {X=11.11493, Y=39.70011} from estimated center X= 11.592, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:36.403 -08 000000018 INF: Swath 2 position calculated to be: {X=12.22293, Y=39.70011} from estimated center X= 11.592, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:13:36.409 -08 000000018 INF: Swath 0: Converted transform from (57.74481, -45.82267) pixels to (0.02001, -0.01587) mm.
17-02-28 20:13:36.415 -08 000000018 INF: Swath 1: Converted transform from (31.86824, -42.36795) pixels to (0.01104, -0.01449) mm.
17-02-28 20:13:36.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:36.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:36.416 -08 000000018 INF: Transformed XStagePosition from 11.11493 mm to 11.1349401529878 mm.
17-02-28 20:13:36.428 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4742463337034 mm.
17-02-28 20:13:36.428 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2742463337034 mm.
17-02-28 20:13:36.428 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3649963337034 mm.
17-02-28 20:13:36.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:36.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:36.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:36.431 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:13:36.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:36.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:36.438 -08 000000053 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:36.438 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:36.438 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:36.439 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:36.439 -08 000000057 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:36.439 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:36.439 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:36.439 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:36.439 -08 000000029 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:36.439 -08 000000029 INF: Z Motor: Moving to -0.1209 mm, started at -0.0100 mm
17-02-28 20:13:36.439 -08 000000029 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:13:36.439 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000057 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:36.440 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:36.440 -08 000000086 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:36.440 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:36.440 -08 000000052 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:36.441 -08 000000038 INF: ===================Move X Motor without settling===================
17-02-28 20:13:36.441 -08 000000102 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:36.441 -08 000000050 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:36.441 -08 000000038 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:36.441 -08 000000095 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:36.441 -08 000000030 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:36.441 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:36.441 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:36.441 -08 000000102 INF: ======================================
17-02-28 20:13:36.441 -08 000000030 INF: ======================================
17-02-28 20:13:36.441 -08 000000106 INF: ======================================
17-02-28 20:13:36.442 -08 000000098 INF: Y Motor: Moving to 64.4742 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:13:36.442 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:36.442 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:36.442 -08 000000086 INF: ======================================
17-02-28 20:13:36.442 -08 000000095 INF: ======================================
17-02-28 20:13:36.443 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:36.443 -08 000000052 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:36.444 -08 000000010 INF: ======================================
17-02-28 20:13:36.444 -08 000000050 INF: ======================================
17-02-28 20:13:36.444 -08 000000052 INF: ======================================
17-02-28 20:13:36.445 -08 000000076 INF: ======================================
17-02-28 20:13:36.445 -08 000000057 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:36.445 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:36.445 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:36.446 -08 000000057 INF: ======================================
17-02-28 20:13:36.446 -08 000000051 INF: ======================================
17-02-28 20:13:36.447 -08 000000037 INF: ======================================
17-02-28 20:13:36.448 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:36.448 -08 000000053 INF: ======================================
17-02-28 20:13:36.510 -08 000000104 INF: FPGA: Recv ZTRG 
17-02-28 20:13:36.510 -08 000000029 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:13:36.511 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.511 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:36.511 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:36.512 -08 000000038 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:36.512 -08 000000038 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:36.571 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:13:36.571 -08 000000029 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:13:36.571 -08 000000029 INF: FPGA: Xmit ZMV 31690\n
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:36.573 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Moving to 11.1349 mm @15.000 mm/sec, started at 11.6685 mm
17-02-28 20:13:36.573 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:36.573 -08 000000038 INF: X Motor: Xmit MA -19606\n
17-02-28 20:13:36.636 -08 000000095 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:13:36.636 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:13:36.637 -08 000000038 INF: X Motor: Recv MA -19606\r\n>
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:36.637 -08 000000038 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Set target position to 5947425 encoder counts
17-02-28 20:13:36.637 -08 000000098 INF: Y Motor: Xmit s r0xca 5947425\r
17-02-28 20:13:36.698 -08 000000053 INF: FPGA: Recv ZMV 
17-02-28 20:13:36.698 -08 000000029 INF: Z Motor: MoveAndTrigger 'ZMV' command took 126.8831 ms
17-02-28 20:13:36.698 -08 000000029 INF: FPGA: Xmit ZDACR\n
17-02-28 20:13:36.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:36.701 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.701 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:13:36.701 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:36.760 -08 000000089 INF: FPGA: Recv ZDACR 31690
17-02-28 20:13:36.760 -08 000000029 INF: Z Motor: MoveAndTrigger took 320.8556 ms w/comms
17-02-28 20:13:36.760 -08 000000029 INF: Z Motor: After move to -0.1209, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:13:36.760 -08 000000029 INF: Z Motor: MoveAbsStepped took 321.0271 ms
17-02-28 20:13:36.760 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:36.761 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:36.762 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:36.762 -08 000000098 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:13:36.762 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:36.762 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:36.763 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:36.763 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:13:36.763 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.764 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:36.764 -08 000000053 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:36.765 -08 000000053 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:36.765 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:36.765 -08 000000053 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:36.822 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:13:36.823 -08 000000053 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:36.823 -08 000000053 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:36.884 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:13:36.884 -08 000000053 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:36.885 -08 000000053 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:36.886 -08 000000098 INF: Y Motor: Unshifted Position: 5870555
17-02-28 20:13:36.886 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.887 -08 000000053 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:36.887 -08 000000053 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:36.888 -08 000000053 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:36.936 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:36.946 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:36.946 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.948 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:36.948 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:36.950 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:36.950 -08 000000053 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:36.950 -08 000000053 INF: Z Motor: Arming to move to -0.0809 mm
17-02-28 20:13:36.950 -08 000000053 INF: FPGA: Xmit ZYT 6427425 4\n
17-02-28 20:13:37.008 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:13:37.008 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6370555 enc / 63.706 mm / ) = 6427425 enc / 64.274 mm
17-02-28 20:13:37.008 -08 000000053 INF: FPGA: Xmit ZARM 21204\n
17-02-28 20:13:37.011 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:37.060 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:37.070 -08 000000055 INF: FPGA: Recv ZARM
17-02-28 20:13:37.070 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9918 ms
17-02-28 20:13:37.070 -08 000000053 INF: Z Motor: ArmAbsStepped took 119.8702 ms
17-02-28 20:13:37.070 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:37.071 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:37.072 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:37.072 -08 000000038 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:37.073 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:37.073 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:37.075 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:37.075 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:13:37.077 -08 000000053 INF: ======================================
17-02-28 20:13:37.136 -08 000000038 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:37.136 -08 000000038 INF: X Motor: Moved to 11.1338 after 499 ms
17-02-28 20:13:37.136 -08 000000038 INF: ======================================
17-02-28 20:13:37.198 -08 000000098 INF: Y Motor: Unshifted Position: 5947427
17-02-28 20:13:37.198 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:37.198 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:37.260 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:37.260 -08 000000098 INF: Y Motor: Moved to 64.4743 after 498 ms
17-02-28 20:13:37.260 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:37.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:37.322 -08 000000098 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:37.322 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:37.322 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:37.385 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:37.386 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:37.386 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:37.386 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:37.448 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:37.509 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:37.571 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:37.571 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:37.571 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:37.633 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:13:37.633 -08 000000098 INF: ======================================
17-02-28 20:13:37.634 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:13:37.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:37.635 -08 000000058 INF: ======================================
17-02-28 20:13:37.697 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:37.731 -08 000000051 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:37.732 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:37.732 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:37.747 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:37.749 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:37.947 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:38.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:38.259 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:38.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:38.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:38.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:38.322 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:13:38.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-02-28 20:13:38.804 -08 000000051 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:38.804 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:38.804 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:38.819 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:38.821 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:13:38.822 -08 000000051 INF: ======================================
17-02-28 20:13:38.823 -08 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:38.824 -08 000000029 INF: ======================================
17-02-28 20:13:38.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:38.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:38.826 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:38.826 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:38.882 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:38.882 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:38.942 -08 000000086 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:38.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:38.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:38.943 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:39.004 -08 000000098 INF: FPGA: Recv TDIYERD 6447426
17-02-28 20:13:39.004 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447426 counts (64.474 mm)
17-02-28 20:13:39.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:39.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:39.005 -08 000000089 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:39.005 -08 000000062 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:39.006 -08 000000062 INF: ======================================
17-02-28 20:13:39.006 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:39.007 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:39.007 -08 000000089 INF: FPGA: Xmit TDIYPOS 6336500\n
17-02-28 20:13:39.066 -08 000000106 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:39.066 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:39.067 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:39.068 -08 000000089 INF: FPGA: Xmit TDIYARM3 139264 6427425 1 1\n
17-02-28 20:13:39.131 -08 000000044 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:39.131 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:39.132 -08 000000089 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:39.133 -08 000000089 INF: ======================================
17-02-28 20:13:39.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:39.135 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:39.135 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.137 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:39.137 -08 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:39.137 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:39.137 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:39.137 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:39.137 -08 000000090 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:39.137 -08 000000090 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:39.137 -08 000000090 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:39.137 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:39.140 -08 000000090 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:39.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:39.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-02-28 20:13:39.503 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:13:39.503 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:13:39.503 -08 000000090 INF: Excitation Filter 1: Moved -107 steps in 365.6069 ms
17-02-28 20:13:39.503 -08 000000090 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.7096 ms
17-02-28 20:13:39.503 -08 000000090 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.8088 ms
17-02-28 20:13:39.503 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 365.805 ms
17-02-28 20:13:39.503 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0061 ms
17-02-28 20:13:39.503 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.0737 ms
17-02-28 20:13:39.503 -08 000000090 INF: ======================================
17-02-28 20:13:39.503 -08 000000047 INF: ======================================
17-02-28 20:13:39.504 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.506 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:39.506 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:13:39.506 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:39.506 -08 000000058 INF: ===================FPGA Z Wait===================
17-02-28 20:13:39.507 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:39.507 -08 000000102 INF: Y Motor: Moving to 14.8259 mm @6.500 mm/sec, started at 64.4743 mm
17-02-28 20:13:39.507 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:39.507 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:39.507 -08 000000064 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:39.507 -08 000000081 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:39.507 -08 000000081 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:39.508 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:13:39.508 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:13:39.510 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.510 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.510 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.510 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.514 -08 000000058 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:39.570 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.570 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:39.570 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:39.632 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.632 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:39.660 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.660 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.660 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.660 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Set target position to 982591 encoder counts
17-02-28 20:13:39.694 -08 000000102 INF: Y Motor: Xmit s r0xca 982591\r
17-02-28 20:13:39.756 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.756 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:13:39.756 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:39.810 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.810 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.810 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:39.810 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:39.820 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:39.820 -08 000000102 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:39.820 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:39.878 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:39.878 -08 000000058 INF: ======================================
17-02-28 20:13:39.944 -08 000000102 INF: Y Motor: Unshifted Position: 5885352
17-02-28 20:13:39.960 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:13:39.960 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:39.960 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:39.960 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:39.960 -08 000000055 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:39.960 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:39.994 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.119 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.126 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:40.126 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:40.126 -08 000000101 INF: ===================Camera #0 Frame #11===================
17-02-28 20:13:40.127 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:13:40.127 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:13:40.127 -08 000000055 INF: ===================Camera #2 Frame #11===================
17-02-28 20:13:40.256 -08 000000102 INF: Y Motor: Unshifted Position: 5680602
17-02-28 20:13:40.296 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:40.296 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:40.296 -08 000000101 INF: ===================Camera #0 Frame #17===================
17-02-28 20:13:40.298 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:13:40.298 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:13:40.298 -08 000000055 INF: ===================Camera #2 Frame #17===================
17-02-28 20:13:40.306 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:40.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-02-28 20:13:40.429 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.466 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:40.466 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:40.466 -08 000000101 INF: ===================Camera #0 Frame #23===================
17-02-28 20:13:40.468 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:13:40.468 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:13:40.468 -08 000000055 INF: ===================Camera #2 Frame #23===================
17-02-28 20:13:40.566 -08 000000102 INF: Y Motor: Unshifted Position: 5478251
17-02-28 20:13:40.616 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.634 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:40.634 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:40.634 -08 000000101 INF: ===================Camera #0 Frame #29===================
17-02-28 20:13:40.637 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:13:40.637 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:13:40.637 -08 000000055 INF: ===================Camera #2 Frame #29===================
17-02-28 20:13:40.744 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.802 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:13:40.802 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:13:40.802 -08 000000101 INF: ===================Camera #0 Frame #35===================
17-02-28 20:13:40.806 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:13:40.806 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:13:40.806 -08 000000055 INF: ===================Camera #2 Frame #36===================
17-02-28 20:13:40.879 -08 000000102 INF: Y Motor: Unshifted Position: 5276091
17-02-28 20:13:40.929 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:40.970 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:40.970 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:40.970 -08 000000101 INF: ===================Camera #0 Frame #42===================
17-02-28 20:13:40.979 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:13:40.979 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:13:40.979 -08 000000055 INF: ===================Camera #2 Frame #42===================
17-02-28 20:13:41.054 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.142 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:41.142 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:41.142 -08 000000101 INF: ===================Camera #0 Frame #48===================
17-02-28 20:13:41.148 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:13:41.148 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:13:41.148 -08 000000055 INF: ===================Camera #2 Frame #48===================
17-02-28 20:13:41.192 -08 000000102 INF: Y Motor: Unshifted Position: 5072643
17-02-28 20:13:41.242 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.310 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:41.310 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:41.310 -08 000000101 INF: ===================Camera #0 Frame #54===================
17-02-28 20:13:41.317 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:13:41.317 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:13:41.317 -08 000000055 INF: ===================Camera #2 Frame #54===================
17-02-28 20:13:41.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:41.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-02-28 20:13:41.366 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.479 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:13:41.479 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:13:41.479 -08 000000101 INF: ===================Camera #0 Frame #60===================
17-02-28 20:13:41.486 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:13:41.486 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:13:41.486 -08 000000055 INF: ===================Camera #2 Frame #61===================
17-02-28 20:13:41.502 -08 000000102 INF: Y Motor: Unshifted Position: 4869624
17-02-28 20:13:41.552 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.648 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:13:41.648 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:13:41.648 -08 000000101 INF: ===================Camera #0 Frame #67===================
17-02-28 20:13:41.658 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:13:41.658 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:13:41.658 -08 000000055 INF: ===================Camera #2 Frame #67===================
17-02-28 20:13:41.679 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.817 -08 000000102 INF: Y Motor: Unshifted Position: 4667258
17-02-28 20:13:41.820 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:41.820 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:41.820 -08 000000101 INF: ===================Camera #0 Frame #73===================
17-02-28 20:13:41.827 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:13:41.827 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:13:41.827 -08 000000055 INF: ===================Camera #2 Frame #73===================
17-02-28 20:13:41.867 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.989 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:13:41.989 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:13:41.989 -08 000000101 INF: ===================Camera #0 Frame #79===================
17-02-28 20:13:41.991 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:41.996 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:13:41.996 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:13:41.996 -08 000000055 INF: ===================Camera #2 Frame #79===================
17-02-28 20:13:42.129 -08 000000102 INF: Y Motor: Unshifted Position: 4465528
17-02-28 20:13:42.158 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:13:42.158 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:13:42.158 -08 000000101 INF: ===================Camera #0 Frame #85===================
17-02-28 20:13:42.165 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:13:42.165 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:13:42.165 -08 000000055 INF: ===================Camera #2 Frame #86===================
17-02-28 20:13:42.179 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.303 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:42.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-02-28 20:13:42.327 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:13:42.327 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:13:42.327 -08 000000101 INF: ===================Camera #0 Frame #92===================
17-02-28 20:13:42.337 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:13:42.337 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:13:42.337 -08 000000055 INF: ===================Camera #2 Frame #92===================
17-02-28 20:13:42.439 -08 000000102 INF: Y Motor: Unshifted Position: 4261434
17-02-28 20:13:42.489 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.499 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:13:42.499 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:13:42.499 -08 000000101 INF: ===================Camera #0 Frame #98===================
17-02-28 20:13:42.506 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:13:42.506 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:13:42.506 -08 000000055 INF: ===================Camera #2 Frame #98===================
17-02-28 20:13:42.613 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.668 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:13:42.668 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:13:42.668 -08 000000101 INF: ===================Camera #0 Frame #104===================
17-02-28 20:13:42.675 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:13:42.675 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:13:42.675 -08 000000055 INF: ===================Camera #2 Frame #104===================
17-02-28 20:13:42.753 -08 000000102 INF: Y Motor: Unshifted Position: 4059923
17-02-28 20:13:42.803 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:42.837 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:13:42.837 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:13:42.837 -08 000000101 INF: ===================Camera #0 Frame #110===================
17-02-28 20:13:42.844 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:13:42.844 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:13:42.844 -08 000000055 INF: ===================Camera #2 Frame #111===================
17-02-28 20:13:42.927 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.006 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:13:43.006 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:13:43.006 -08 000000101 INF: ===================Camera #0 Frame #117===================
17-02-28 20:13:43.017 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:13:43.017 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:13:43.017 -08 000000055 INF: ===================Camera #2 Frame #117===================
17-02-28 20:13:43.063 -08 000000102 INF: Y Motor: Unshifted Position: 3855825
17-02-28 20:13:43.113 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.177 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:13:43.177 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:13:43.177 -08 000000101 INF: ===================Camera #0 Frame #123===================
17-02-28 20:13:43.187 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:13:43.187 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:13:43.187 -08 000000055 INF: ===================Camera #2 Frame #123===================
17-02-28 20:13:43.239 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:43.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:43.322 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:13:43.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:43.346 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:13:43.346 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:13:43.346 -08 000000101 INF: ===================Camera #0 Frame #129===================
17-02-28 20:13:43.357 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:13:43.357 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:13:43.357 -08 000000055 INF: ===================Camera #2 Frame #130===================
17-02-28 20:13:43.377 -08 000000102 INF: Y Motor: Unshifted Position: 3653889
17-02-28 20:13:43.421 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:43.427 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:13:43.500 -08 000000042 INF: Current Position of Pump is: 11904
17-02-28 20:13:43.515 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:13:43.515 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:13:43.515 -08 000000101 INF: ===================Camera #0 Frame #135===================
17-02-28 20:13:43.530 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:13:43.530 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:13:43.530 -08 000000055 INF: ===================Camera #2 Frame #136===================
17-02-28 20:13:43.551 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.600 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:43.684 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:13:43.684 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:13:43.684 -08 000000101 INF: ===================Camera #0 Frame #142===================
17-02-28 20:13:43.688 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:13:43.688 -08 000000042 INF: Current Position of Pump is: 11904
17-02-28 20:13:43.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:13:43.689 -08 000000102 INF: Y Motor: Unshifted Position: 3451091
17-02-28 20:13:43.701 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:13:43.701 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:13:43.701 -08 000000055 INF: ===================Camera #2 Frame #142===================
17-02-28 20:13:43.739 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.788 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD11904R\r
17-02-28 20:13:43.857 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:13:43.857 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:13:43.857 -08 000000101 INF: ===================Camera #0 Frame #148===================
17-02-28 20:13:43.863 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:43.871 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:13:43.871 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:13:43.871 -08 000000055 INF: ===================Camera #2 Frame #148===================
17-02-28 20:13:43.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:43.974 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:43.999 -08 000000102 INF: Y Motor: Unshifted Position: 3245694
17-02-28 20:13:44.026 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:13:44.026 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:13:44.026 -08 000000101 INF: ===================Camera #0 Frame #154===================
17-02-28 20:13:44.041 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:13:44.041 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:13:44.041 -08 000000055 INF: ===================Camera #2 Frame #155===================
17-02-28 20:13:44.049 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.060 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:44.173 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.195 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:13:44.195 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:13:44.195 -08 000000101 INF: ===================Camera #0 Frame #160===================
17-02-28 20:13:44.214 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:13:44.214 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:13:44.214 -08 000000055 INF: ===================Camera #2 Frame #161===================
17-02-28 20:13:44.310 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:44.313 -08 000000102 INF: Y Motor: Unshifted Position: 3043984
17-02-28 20:13:44.363 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.365 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:13:44.365 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:13:44.365 -08 000000101 INF: ===================Camera #0 Frame #167===================
17-02-28 20:13:44.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:44.385 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:13:44.385 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:13:44.385 -08 000000055 INF: ===================Camera #2 Frame #167===================
17-02-28 20:13:44.487 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.538 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:13:44.538 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:13:44.538 -08 000000101 INF: ===================Camera #0 Frame #173===================
17-02-28 20:13:44.554 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:13:44.554 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:13:44.554 -08 000000055 INF: ===================Camera #2 Frame #174===================
17-02-28 20:13:44.621 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:44.622 -08 000000102 INF: Y Motor: Unshifted Position: 2841190
17-02-28 20:13:44.672 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.683 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:44.708 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:13:44.708 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:13:44.708 -08 000000101 INF: ===================Camera #0 Frame #179===================
17-02-28 20:13:44.726 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:13:44.726 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:13:44.726 -08 000000055 INF: ===================Camera #2 Frame #180===================
17-02-28 20:13:44.799 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.878 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:13:44.878 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:13:44.878 -08 000000101 INF: ===================Camera #0 Frame #186===================
17-02-28 20:13:44.896 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:13:44.896 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:13:44.896 -08 000000055 INF: ===================Camera #2 Frame #186===================
17-02-28 20:13:44.933 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:44.935 -08 000000102 INF: Y Motor: Unshifted Position: 2638168
17-02-28 20:13:44.985 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:44.996 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:45.051 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:13:45.051 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:13:45.051 -08 000000101 INF: ===================Camera #0 Frame #192===================
17-02-28 20:13:45.066 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:13:45.066 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:13:45.066 -08 000000055 INF: ===================Camera #2 Frame #192===================
17-02-28 20:13:45.110 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.220 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:13:45.220 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:13:45.220 -08 000000101 INF: ===================Camera #0 Frame #198===================
17-02-28 20:13:45.236 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:13:45.236 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:13:45.236 -08 000000055 INF: ===================Camera #2 Frame #199===================
17-02-28 20:13:45.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:45.249 -08 000000102 INF: Y Motor: Unshifted Position: 2435379
17-02-28 20:13:45.299 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.309 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:45.390 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:13:45.390 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:13:45.390 -08 000000101 INF: ===================Camera #0 Frame #204===================
17-02-28 20:13:45.410 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:13:45.410 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:13:45.410 -08 000000055 INF: ===================Camera #2 Frame #205===================
17-02-28 20:13:45.423 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:45.559 -08 000000102 INF: Y Motor: Unshifted Position: 2232362
17-02-28 20:13:45.560 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:13:45.560 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:13:45.560 -08 000000101 INF: ===================Camera #0 Frame #211===================
17-02-28 20:13:45.581 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:13:45.581 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:13:45.581 -08 000000055 INF: ===================Camera #2 Frame #211===================
17-02-28 20:13:45.609 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:45.733 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:13:45.733 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:13:45.733 -08 000000101 INF: ===================Camera #0 Frame #217===================
17-02-28 20:13:45.735 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.751 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:13:45.751 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:13:45.751 -08 000000055 INF: ===================Camera #2 Frame #218===================
17-02-28 20:13:45.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:45.871 -08 000000102 INF: Y Motor: Unshifted Position: 2029553
17-02-28 20:13:45.903 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:13:45.903 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:13:45.903 -08 000000101 INF: ===================Camera #0 Frame #223===================
17-02-28 20:13:45.921 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:45.925 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:13:45.925 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:13:45.925 -08 000000055 INF: ===================Camera #2 Frame #224===================
17-02-28 20:13:45.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:45.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:13:45.932 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:13:46.045 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.073 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:13:46.073 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:13:46.073 -08 000000101 INF: ===================Camera #0 Frame #230===================
17-02-28 20:13:46.095 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:13:46.095 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:13:46.095 -08 000000055 INF: ===================Camera #2 Frame #230===================
17-02-28 20:13:46.185 -08 000000102 INF: Y Motor: Unshifted Position: 1827831
17-02-28 20:13:46.236 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.247 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:13:46.247 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:13:46.247 -08 000000101 INF: ===================Camera #0 Frame #236===================
17-02-28 20:13:46.266 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:13:46.266 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:13:46.266 -08 000000055 INF: ===================Camera #2 Frame #237===================
17-02-28 20:13:46.357 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.417 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:13:46.417 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:13:46.417 -08 000000101 INF: ===================Camera #0 Frame #242===================
17-02-28 20:13:46.440 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:13:46.440 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:13:46.440 -08 000000055 INF: ===================Camera #2 Frame #243===================
17-02-28 20:13:46.496 -08 000000102 INF: Y Motor: Unshifted Position: 1622443
17-02-28 20:13:46.546 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.587 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:13:46.587 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:13:46.587 -08 000000101 INF: ===================Camera #0 Frame #248===================
17-02-28 20:13:46.611 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:13:46.611 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:13:46.611 -08 000000055 INF: ===================Camera #2 Frame #249===================
17-02-28 20:13:46.670 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.757 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:13:46.757 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:13:46.757 -08 000000101 INF: ===================Camera #0 Frame #255===================
17-02-28 20:13:46.782 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:13:46.782 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:13:46.782 -08 000000055 INF: ===================Camera #2 Frame #256===================
17-02-28 20:13:46.810 -08 000000102 INF: Y Motor: Unshifted Position: 1422021
17-02-28 20:13:46.860 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:46.930 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:13:46.930 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:13:46.930 -08 000000101 INF: ===================Camera #0 Frame #261===================
17-02-28 20:13:46.956 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:13:46.956 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:13:46.956 -08 000000055 INF: ===================Camera #2 Frame #262===================
17-02-28 20:13:46.981 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.033 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:13:47.100 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:13:47.100 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:13:47.100 -08 000000101 INF: ===================Camera #0 Frame #267===================
17-02-28 20:13:47.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:47.120 -08 000000102 INF: Y Motor: Unshifted Position: 1217915
17-02-28 20:13:47.126 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:13:47.126 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:13:47.126 -08 000000055 INF: ===================Camera #2 Frame #268===================
17-02-28 20:13:47.170 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.219 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:47.243 -08 000000051 INF: FPGA: Recv TDIYWAIT
17-02-28 20:13:47.243 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:47.245 -08 000000081 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:13:47.246 -08 000000038 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:13:47.246 -08 000000086 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:13:47.246 -08 000000038 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:13:47.246 -08 000000038 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:13:47.246 -08 000000038 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:13:47.246 -08 000000086 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:13:47.246 -08 000000038 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:13:47.246 -08 000000086 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:13:47.246 -08 000000086 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:13:47.247 -08 000000086 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:13:47.270 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:47.270 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:47.270 -08 000000101 INF: ===================Camera #0 Frame #272===================
17-02-28 20:13:47.286 -08 000000101 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:47.287 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:47.295 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.306 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:47.431 -08 000000102 INF: Y Motor: Unshifted Position: 1015548
17-02-28 20:13:47.453 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:13:47.453 -08 000000055 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:13:47.453 -08 000000055 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:13:47.453 -08 000000055 INF: ===================Camera #2 Frame #272===================
17-02-28 20:13:47.453 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:13:47.465 -08 000000055 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:13:47.466 -08 000000055 INF: ===================CameraTDI Cleanup===================
17-02-28 20:13:47.481 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:47.486 -08 000000101 INF: ======================================
17-02-28 20:13:47.556 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:47.618 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:13:47.618 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:13:47.618 -08 000000038 INF: Excitation Filter 1: Moved 107 steps in 371.929 ms
17-02-28 20:13:47.618 -08 000000038 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0857 ms
17-02-28 20:13:47.618 -08 000000038 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1739 ms
17-02-28 20:13:47.618 -08 000000086 INF: Excitation Filter 2: Moved 107 steps in 371.8317 ms
17-02-28 20:13:47.618 -08 000000086 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.264 ms
17-02-28 20:13:47.618 -08 000000086 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.3427 ms
17-02-28 20:13:47.618 -08 000000038 INF: ======================================
17-02-28 20:13:47.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:47.619 -08 000000086 INF: ======================================
17-02-28 20:13:47.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:13:47.620 -08 000000102 INF: Y Motor: Unshifted Position: 982591
17-02-28 20:13:47.620 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:47.620 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:47.620 -08 000000081 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:47.621 -08 000000081 INF: ======================================
17-02-28 20:13:47.661 -08 000000055 INF: Camera #2 ReleaseBuffer
17-02-28 20:13:47.661 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:13:47.680 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:47.680 -08 000000102 INF: Y Motor: Moved to 14.8259 after 7859 ms
17-02-28 20:13:47.680 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:47.695 -08 000000055 INF: ======================================
17-02-28 20:13:47.696 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:13:47.697 -08 000000064 INF: ======================================
17-02-28 20:13:47.746 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:13:47.746 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:47.746 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:47.808 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:47.808 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:47.808 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:47.867 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:47.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:47.928 -08 000000042 INF: WaitCommand(10000) start
17-02-28 20:13:47.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:47.932 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:47.994 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:47.994 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:47.994 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:48.056 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.056 -08 000000102 INF: ======================================
17-02-28 20:13:48.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:48.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:48.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.059 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:13:48.116 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:13:48.116 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:48.178 -08 000000090 INF: FPGA: Recv TDIYERD 1482592
17-02-28 20:13:48.178 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:13:48.240 -08 000000104 INF: FPGA: Recv ZADCR 30466
17-02-28 20:13:48.240 -08 000000018 INF: At scan end Y pos = 14.826 and Z pos = -0.117. Y moved -48.539 mm
17-02-28 20:13:48.240 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:13:48.302 -08 000000076 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:13:48.302 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:13:48.302 -08 000000018 INF: TDIScan finished after 11885.3549 ms
17-02-28 20:13:48.302 -08 000000018 INF: Image[0]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:48.302 -08 000000018 INF: Image[2]: Y should trigger at 63.365 mm, 2nd row was at 64.274 mm (error = 0.909 mm)
17-02-28 20:13:48.304 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.337 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.852 um
17-02-28 20:13:48.337 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.338 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:13:48.368 -08 000000066 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:13:48.369 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.369 -08 000000089 INF: ===================Dither Clean Up Command===================
17-02-28 20:13:48.369 -08 000000047 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:13:48.370 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:13:48.370 -08 000000062 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:13:48.370 -08 000000062 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:13:48.370 -08 000000047 INF: ======================================
17-02-28 20:13:48.370 -08 000000062 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:13:48.370 -08 000000102 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:13:48.370 -08 000000102 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:13:48.370 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:48.370 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:48.373 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:13:48.374 -08 000000037 INF: ===================LFT:Extracting coords===================
17-02-28 20:13:48.399 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:48.399 -08 000000037 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:13:48.400 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.400 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.400 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.400 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.401 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.401 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.401 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.401 -08 000000045 INF: ===================Lookup Focus Tracking===================
17-02-28 20:13:48.430 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:48.430 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:13:48.430 -08 000000090 INF: FPGA: Xmit ZDACW 31690\n
17-02-28 20:13:48.430 -08 000000102 INF: ======================================
17-02-28 20:13:48.431 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.431 -08 000000062 INF: ======================================
17-02-28 20:13:48.475 -08 000000076 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.475 -08 000000034 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.475 -08 000000045 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.475 -08 000000032 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:13:48.489 -08 000000052 INF: FPGA: Recv ZDACW 
17-02-28 20:13:48.490 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:13:48.490 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:13:48.554 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:13:48.554 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:13:48.555 -08 000000090 INF: ======================================
17-02-28 20:13:48.626 -08 000000076 INF: LFT found best fwhm score 2.000014 in 151 ms
17-02-28 20:13:48.626 -08 000000076 INF: LFT found good score at index 1669 with fwhm value 2.000014. Next cycle, cycle 4 starting Z position for top surface is at -0.123 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.626 -08 000000034 INF: LFT found best fwhm score 2.209527 in 151 ms
17-02-28 20:13:48.626 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.626 -08 000000034 INF: LFT found good score at index 5233 with fwhm value 2.209527. Next cycle, cycle 4 starting Z position for top surface is at -0.123 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.627 -08 000000045 INF: LFT found best fwhm score 2.000089 in 151 ms
17-02-28 20:13:48.627 -08 000000045 INF: LFT found good score at index 1105 with fwhm value 2.000089. Next cycle, cycle 4 starting Z position for top surface is at -0.124 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.627 -08 000000032 INF: LFT found best fwhm score 2.000196 in 152 ms
17-02-28 20:13:48.627 -08 000000032 INF: LFT found good score at index 2077 with fwhm value 2.000196. Next cycle, cycle 4 starting Z position for top surface is at -0.123 mm FC:A, C:3,L:3,T
17-02-28 20:13:48.627 -08 000000076 INF: ======================================
17-02-28 20:13:48.627 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.627 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.627 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:13:48.627 -08 000000045 INF: ======================================
17-02-28 20:13:48.627 -08 000000032 INF: ======================================
17-02-28 20:13:48.627 -08 000000034 INF: ======================================
17-02-28 20:13:48.629 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:13:48.629 -08 000000037 INF: LFT weighted average best Z for top surface is at -0.123mm FC:A, C:3,L:3,T
17-02-28 20:13:48.630 -08 000000037 INF: ======================================
17-02-28 20:13:48.631 -08 000000089 INF: ======================================
17-02-28 20:13:48.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:13:48.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:48.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 11.11493 Y = 39.70011===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left, Waiting for image analysis===================
17-02-28 20:13:48.635 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:13:48.658 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:13:48.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:13:48.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:13:48.659 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:48.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:13:48.659 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:13:48.659 -08 000000018 INF: Transformed XStagePosition from 12.22293 mm to 12.2339699547738 mm.
17-02-28 20:13:48.671 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4756263330355 mm.
17-02-28 20:13:48.671 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2756263330355 mm.
17-02-28 20:13:48.671 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3663763330355 mm.
17-02-28 20:13:48.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:13:48.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:48.674 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -120.9 um, section = C_1
17-02-28 20:13:48.676 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:48.676 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:48.682 -08 000000044 INF: ===================MoveEmissionFilters===================
17-02-28 20:13:48.683 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:13:48.684 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:13:48.685 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:48.685 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:48.688 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:48.689 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:13:48.689 -08 000000010 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:13:48.689 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:48.691 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:13:48.694 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:48.694 -08 000000076 INF: ===================Move X Motor without settling===================
17-02-28 20:13:48.694 -08 000000076 INF: X Motor: Xmit PR VM\n
17-02-28 20:13:48.696 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:48.696 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:48.696 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:13:48.697 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:48.697 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.697 -08 000000029 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:48.698 -08 000000029 INF: Y Motor: Moving to 64.4756 mm @25.000 mm/sec, started at 14.8259 mm
17-02-28 20:13:48.698 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:48.698 -08 000000108 INF: ======================================
17-02-28 20:13:48.698 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:13:48.698 -08 000000029 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:48.698 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:48.698 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:48.699 -08 000000104 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:13:48.701 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:48.701 -08 000000032 INF: ===================Camera Arm TDI===================
17-02-28 20:13:48.701 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":3,"Tile":1104,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF280","HCSMMF192","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.701 -08 000000055 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:13:48.701 -08 000000108 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:13:48.701 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:13:48.701 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:13:48.701 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:13:48.702 -08 000000055 INF: ======================================
17-02-28 20:13:48.702 -08 000000087 INF: ======================================
17-02-28 20:13:48.702 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:48.703 -08 000000058 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:13:48.703 -08 000000058 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:13:48.703 -08 000000058 INF: ======================================
17-02-28 20:13:48.703 -08 000000052 INF: ======================================
17-02-28 20:13:48.703 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:13:48.703 -08 000000032 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:48.704 -08 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:13:48.704 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:13:48.704 -08 000000055 INF: ======================================
17-02-28 20:13:48.705 -08 000000087 INF: ======================================
17-02-28 20:13:48.705 -08 000000047 INF: ======================================
17-02-28 20:13:48.705 -08 000000108 INF: ======================================
17-02-28 20:13:48.706 -08 000000095 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:13:48.706 -08 000000037 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:13:48.707 -08 000000095 INF: ======================================
17-02-28 20:13:48.709 -08 000000037 INF: ======================================
17-02-28 20:13:48.712 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:13:48.716 -08 000000100 INF: ======================================
17-02-28 20:13:48.720 -08 000000044 INF: ======================================
17-02-28 20:13:48.745 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":3,"Tile":1102,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF262","HCSMMF184","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.758 -08 000000044 INF: FPGA: Recv ZSEL 
17-02-28 20:13:48.758 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":3,"Tile":1105,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF254","HCSMMF203","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.759 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:48.759 -08 000000104 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:13:48.760 -08 000000076 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:13:48.760 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.760 -08 000000029 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:48.760 -08 000000076 INF: X Motor: Xmit PR VI\n
17-02-28 20:13:48.760 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:48.824 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:13:48.825 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:13:48.826 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.826 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Moving to 12.2340 mm @15.000 mm/sec, started at 11.1338 mm
17-02-28 20:13:48.826 -08 000000076 INF: X Motor: Xmit MA -19155\n
17-02-28 20:13:48.826 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:13:48.826 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.828 -08 000000104 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:13:48.828 -08 000000104 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:13:48.828 -08 000000104 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:13:48.861 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":3,"Tile":1103,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF209","HCSMMF242","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.862 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":3,"Tile":1101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF261","HCSMMF195","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.863 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":3,"Tile":1108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF221","HCSMMF224","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.864 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":3,"Tile":1109,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF239","HCSMMF282","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.865 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":3,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF277","HCSMMF267","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.866 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":3,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF213","HCSMMF236","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.867 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":3,"Tile":1111,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF286","HCSMMF226","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.867 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":3,"Tile":1110,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF260","HCSMMF205","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.868 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":3,"Tile":1112,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF177","HCSMMF269","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.869 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":3,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF245","HCSMMF253","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.870 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":3,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF212","HCSMMF250","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.871 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":3,"Tile":1117,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF229","HCSMMF246","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.872 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":3,"Tile":1115,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF243","HCSMMF185","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.873 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":3,"Tile":1116,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF268","HCSMMF188","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.873 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":3,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF273","HCSMMF220","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.874 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":3,"Tile":1119,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF202","HCSMMF182","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.875 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":3,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF275","HCSMMF234","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.876 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":3,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF214","HCSMMF256","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.877 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":3,"Tile":1120,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF200","HCSMMF240","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.878 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":3,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF191","HCSMMF259","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.879 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":3,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF251","HCSMMF179","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.880 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:13:48.880 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.880 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":3,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF222","HCSMMF271","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.881 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":3,"Tile":1128,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF183","HCSMMF227","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.882 -08 000000076 INF: X Motor: Recv MA -19155\r\n>
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:48.882 -08 000000076 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Set target position to 5947563 encoder counts
17-02-28 20:13:48.882 -08 000000029 INF: Y Motor: Xmit s r0xca 5947563\r
17-02-28 20:13:48.882 -08 000000104 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:13:48.882 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:48.883 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":3,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF181","HCSMMF207","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.883 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":3,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF204","HCSMMF270","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:13:48.884 -08 000000104 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:13:48.884 -08 000000104 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:13:48.884 -08 000000104 INF: Z Motor: Arming to move to -0.0809 mm
17-02-28 20:13:48.884 -08 000000104 INF: FPGA: Xmit ZYT 6427563 4\n
17-02-28 20:13:48.885 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:48.891 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:13:48.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:48.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-02-28 20:13:48.942 -08 000000034 INF: FPGA: Recv ZYT 
17-02-28 20:13:48.942 -08 000000104 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482591 enc / 14.826 mm / ) = 6427563 enc / 64.276 mm
17-02-28 20:13:48.942 -08 000000104 INF: FPGA: Xmit ZARM 21204\n
17-02-28 20:13:48.944 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:48.944 -08 000000029 INF: Y Motor: Start the move command
17-02-28 20:13:48.944 -08 000000029 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:48.972 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:48.972 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:13:49.004 -08 000000108 INF: FPGA: Recv ZARM
17-02-28 20:13:49.004 -08 000000104 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8492 ms
17-02-28 20:13:49.004 -08 000000104 INF: Z Motor: ArmAbsStepped took 119.6687 ms
17-02-28 20:13:49.004 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:13:49.006 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:49.006 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:49.006 -08 000000029 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:13:49.006 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.007 -08 000000104 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:13:49.007 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:49.008 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.009 -08 000000104 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:13:49.009 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:13:49.010 -08 000000104 INF: ======================================
17-02-28 20:13:49.014 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:13:49.101 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.107 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:13:49.132 -08 000000029 INF: Y Motor: Unshifted Position: 1069219
17-02-28 20:13:49.182 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.209 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.215 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:13:49.298 -08 000000032 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:49.298 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:49.298 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:49.308 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.313 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:49.315 -08 000000032 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:13:49.319 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:13:49.446 -08 000000029 INF: Y Motor: Unshifted Position: 1774260
17-02-28 20:13:49.496 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.506 -08 000000076 INF: X Motor: Xmit PR ER\n
17-02-28 20:13:49.570 -08 000000076 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:13:49.570 -08 000000076 INF: X Motor: Moved to 12.2349 after 688 ms
17-02-28 20:13:49.570 -08 000000076 INF: ======================================
17-02-28 20:13:49.616 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:13:49.618 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.757 -08 000000029 INF: Y Motor: Unshifted Position: 2560114
17-02-28 20:13:49.807 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.922 -08 000000032 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:13:49.922 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:13:49.922 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:13:49.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:49.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-02-28 20:13:49.931 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:49.938 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:13:49.940 -08 000000032 INF: ===================Camera Arm TDI===================
17-02-28 20:13:49.942 -08 000000032 INF: ======================================
17-02-28 20:13:49.944 -08 000000010 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:13:49.945 -08 000000010 INF: ======================================
17-02-28 20:13:50.083 -08 000000029 INF: Y Motor: Unshifted Position: 3373387
17-02-28 20:13:50.133 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.257 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.396 -08 000000029 INF: Y Motor: Unshifted Position: 4155933
17-02-28 20:13:50.446 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.570 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.706 -08 000000029 INF: Y Motor: Unshifted Position: 4930924
17-02-28 20:13:50.756 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.883 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:50.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:50.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-02-28 20:13:51.019 -08 000000029 INF: Y Motor: Unshifted Position: 5708830
17-02-28 20:13:51.069 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:51.193 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:51.332 -08 000000029 INF: Y Motor: Unshifted Position: 5947566
17-02-28 20:13:51.332 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:13:51.332 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:51.394 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:51.394 -08 000000029 INF: Y Motor: Moved to 64.4757 after 2388 ms
17-02-28 20:13:51.394 -08 000000029 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:13:51.456 -08 000000029 INF: Y Motor: Recv v 4096\r
17-02-28 20:13:51.456 -08 000000029 INF: Y Motor: Status After move finished OK:
17-02-28 20:13:51.456 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:51.520 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:51.520 -08 000000029 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:51.520 -08 000000029 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: Recv v 402653184\r
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:13:51.580 -08 000000029 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:13:51.642 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:51.707 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:51.707 -08 000000029 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:13:51.707 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:51.782 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:13:51.782 -08 000000029 INF: ======================================
17-02-28 20:13:51.783 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:13:51.784 -08 000000030 INF: ======================================
17-02-28 20:13:51.785 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:13:51.786 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:51.786 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:13:51.786 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:13:51.832 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:13:51.832 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:13:51.845 -08 000000076 INF: FPGA: Recv ZFREQCL
17-02-28 20:13:51.845 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:13:51.846 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:51.846 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:13:51.906 -08 000000030 INF: FPGA: Recv TDIYERD 6447564
17-02-28 20:13:51.906 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447564 counts (64.476 mm)
17-02-28 20:13:51.906 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:51.907 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:51.908 -08 000000102 INF: ===================Set YMotor gains for scans===================
17-02-28 20:13:51.908 -08 000000106 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:51.908 -08 000000102 INF: ======================================
17-02-28 20:13:51.909 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:51.909 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:13:51.909 -08 000000106 INF: FPGA: Xmit TDIYPOS 6336638\n
17-02-28 20:13:51.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:51.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:13:51.968 -08 000000069 INF: FPGA: Recv TDIYPOS
17-02-28 20:13:51.968 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:51.970 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:13:51.970 -08 000000106 INF: FPGA: Xmit TDIYARM3 139264 6427563 1 1\n
17-02-28 20:13:52.033 -08 000000034 INF: FPGA: Recv TDIYARM3
17-02-28 20:13:52.033 -08 000000106 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:13:52.035 -08 000000106 INF: ===================TDI FPGA Arm===================
17-02-28 20:13:52.036 -08 000000106 INF: ======================================
17-02-28 20:13:52.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:13:52.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:13:52.038 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.038 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.039 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.040 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:13:52.040 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:13:52.040 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:13:52.040 -08 000000032 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:13:52.040 -08 000000085 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:13:52.040 -08 000000085 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:13:52.040 -08 000000032 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:13:52.040 -08 000000032 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:13:52.040 -08 000000032 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:13:52.041 -08 000000032 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:13:52.405 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:13:52.405 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:13:52.405 -08 000000032 INF: Excitation Filter 2: Moved -107 steps in 364.8884 ms
17-02-28 20:13:52.405 -08 000000032 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.091 ms
17-02-28 20:13:52.405 -08 000000032 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.1785 ms
17-02-28 20:13:52.405 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 365.2233 ms
17-02-28 20:13:52.405 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.64 ms
17-02-28 20:13:52.405 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.7099 ms
17-02-28 20:13:52.406 -08 000000032 INF: ======================================
17-02-28 20:13:52.406 -08 000000085 INF: ======================================
17-02-28 20:13:52.407 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:13:52.409 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:13:52.409 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:13:52.409 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:13:52.409 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:13:52.409 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:13:52.409 -08 000000066 INF: Y Motor: Moving to 14.8273 mm @6.500 mm/sec, started at 64.4757 mm
17-02-28 20:13:52.409 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:13:52.409 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:13:52.410 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:13:52.410 -08 000000030 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:13:52.410 -08 000000030 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:13:52.410 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:13:52.411 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:13:52.413 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.413 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.414 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.414 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.454 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.454 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:13:52.454 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:13:52.518 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.518 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:13:52.563 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.563 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.565 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.565 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Set target position to 982729 encoder counts
17-02-28 20:13:52.580 -08 000000066 INF: Y Motor: Xmit s r0xca 982729\r
17-02-28 20:13:52.641 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.641 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:13:52.641 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:13:52.703 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:13:52.703 -08 000000066 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:13:52.703 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:52.713 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.713 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.715 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:13:52.715 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:13:52.779 -08 000000085 INF: FPGA: Recv ZWAIT 
17-02-28 20:13:52.779 -08 000000051 INF: ======================================
17-02-28 20:13:52.830 -08 000000066 INF: Y Motor: Unshifted Position: 5885058
17-02-28 20:13:52.863 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:52.863 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:52.863 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:13:52.865 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:13:52.865 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:13:52.865 -08 000000081 INF: ===================Camera #0 Frame #5===================
17-02-28 20:13:52.880 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:52.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:52.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-02-28 20:13:53.003 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.037 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:13:53.037 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:13:53.037 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:13:53.037 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:13:53.037 -08 000000064 INF: ===================Camera #2 Frame #12===================
17-02-28 20:13:53.037 -08 000000081 INF: ===================Camera #0 Frame #12===================
17-02-28 20:13:53.141 -08 000000066 INF: Y Motor: Unshifted Position: 5680311
17-02-28 20:13:53.191 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.213 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:13:53.213 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:13:53.213 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:13:53.213 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:13:53.213 -08 000000064 INF: ===================Camera #2 Frame #18===================
17-02-28 20:13:53.213 -08 000000081 INF: ===================Camera #0 Frame #18===================
17-02-28 20:13:53.317 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.384 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:13:53.384 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:13:53.384 -08 000000064 INF: ===================Camera #2 Frame #24===================
17-02-28 20:13:53.390 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:13:53.390 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:13:53.390 -08 000000081 INF: ===================Camera #0 Frame #25===================
17-02-28 20:13:53.452 -08 000000066 INF: Y Motor: Unshifted Position: 5478602
17-02-28 20:13:53.502 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.563 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:13:53.563 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:13:53.563 -08 000000064 INF: ===================Camera #2 Frame #31===================
17-02-28 20:13:53.570 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:13:53.570 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:13:53.570 -08 000000081 INF: ===================Camera #0 Frame #31===================
17-02-28 20:13:53.628 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.736 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:53.736 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:53.736 -08 000000064 INF: ===================Camera #2 Frame #37===================
17-02-28 20:13:53.739 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:13:53.739 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:13:53.739 -08 000000081 INF: ===================Camera #0 Frame #37===================
17-02-28 20:13:53.764 -08 000000066 INF: Y Motor: Unshifted Position: 5276444
17-02-28 20:13:53.814 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:53.914 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:13:53.914 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:13:53.914 -08 000000064 INF: ===================Camera #2 Frame #44===================
17-02-28 20:13:53.915 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:13:53.915 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:13:53.915 -08 000000081 INF: ===================Camera #0 Frame #44===================
17-02-28 20:13:53.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:53.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-02-28 20:13:53.940 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.078 -08 000000066 INF: Y Motor: Unshifted Position: 5073428
17-02-28 20:13:54.091 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:13:54.091 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:13:54.091 -08 000000064 INF: ===================Camera #2 Frame #50===================
17-02-28 20:13:54.096 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:13:54.096 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:13:54.096 -08 000000081 INF: ===================Camera #0 Frame #51===================
17-02-28 20:13:54.128 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.251 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.269 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:13:54.269 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:13:54.269 -08 000000064 INF: ===================Camera #2 Frame #57===================
17-02-28 20:13:54.277 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:13:54.277 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:13:54.277 -08 000000081 INF: ===================Camera #0 Frame #57===================
17-02-28 20:13:54.389 -08 000000066 INF: Y Motor: Unshifted Position: 4870629
17-02-28 20:13:54.439 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.441 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:13:54.441 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:13:54.441 -08 000000064 INF: ===================Camera #2 Frame #63===================
17-02-28 20:13:54.453 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:13:54.453 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:13:54.453 -08 000000081 INF: ===================Camera #0 Frame #64===================
17-02-28 20:13:54.565 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.615 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:13:54.615 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:13:54.615 -08 000000064 INF: ===================Camera #2 Frame #70===================
17-02-28 20:13:54.632 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:13:54.632 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:13:54.632 -08 000000081 INF: ===================Camera #0 Frame #70===================
17-02-28 20:13:54.700 -08 000000066 INF: Y Motor: Unshifted Position: 4666964
17-02-28 20:13:54.750 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.791 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:13:54.791 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:13:54.791 -08 000000064 INF: ===================Camera #2 Frame #76===================
17-02-28 20:13:54.807 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:13:54.807 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:13:54.807 -08 000000081 INF: ===================Camera #0 Frame #77===================
17-02-28 20:13:54.877 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:54.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:54.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-02-28 20:13:54.960 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:13:54.960 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:13:54.960 -08 000000064 INF: ===================Camera #2 Frame #82===================
17-02-28 20:13:54.979 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:13:54.979 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:13:54.979 -08 000000081 INF: ===================Camera #0 Frame #83===================
17-02-28 20:13:55.012 -08 000000066 INF: Y Motor: Unshifted Position: 4464150
17-02-28 20:13:55.062 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.129 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:13:55.129 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:13:55.129 -08 000000064 INF: ===================Camera #2 Frame #89===================
17-02-28 20:13:55.147 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:13:55.147 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:13:55.147 -08 000000081 INF: ===================Camera #0 Frame #89===================
17-02-28 20:13:55.188 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.301 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:13:55.301 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:13:55.301 -08 000000064 INF: ===================Camera #2 Frame #95===================
17-02-28 20:13:55.315 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:13:55.315 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:13:55.315 -08 000000081 INF: ===================Camera #0 Frame #95===================
17-02-28 20:13:55.326 -08 000000066 INF: Y Motor: Unshifted Position: 4261786
17-02-28 20:13:55.376 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.470 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:13:55.470 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:13:55.470 -08 000000064 INF: ===================Camera #2 Frame #101===================
17-02-28 20:13:55.484 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:13:55.484 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:13:55.484 -08 000000081 INF: ===================Camera #0 Frame #102===================
17-02-28 20:13:55.499 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.637 -08 000000066 INF: Y Motor: Unshifted Position: 4059624
17-02-28 20:13:55.639 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:13:55.639 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:13:55.639 -08 000000064 INF: ===================Camera #2 Frame #107===================
17-02-28 20:13:55.657 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:13:55.657 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:13:55.658 -08 000000081 INF: ===================Camera #0 Frame #108===================
17-02-28 20:13:55.687 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.808 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:13:55.808 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:13:55.808 -08 000000064 INF: ===================Camera #2 Frame #114===================
17-02-28 20:13:55.813 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:55.826 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:13:55.826 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:13:55.826 -08 000000081 INF: ===================Camera #0 Frame #114===================
17-02-28 20:13:55.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:55.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-02-28 20:13:55.949 -08 000000066 INF: Y Motor: Unshifted Position: 3856613
17-02-28 20:13:55.981 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:13:55.981 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:13:55.981 -08 000000064 INF: ===================Camera #2 Frame #120===================
17-02-28 20:13:55.995 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:13:55.995 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:13:55.995 -08 000000081 INF: ===================Camera #0 Frame #120===================
17-02-28 20:13:55.999 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.125 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.151 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:13:56.151 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:13:56.151 -08 000000064 INF: ===================Camera #2 Frame #126===================
17-02-28 20:13:56.163 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:13:56.163 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:13:56.163 -08 000000081 INF: ===================Camera #0 Frame #127===================
17-02-28 20:13:56.261 -08 000000066 INF: Y Motor: Unshifted Position: 3652512
17-02-28 20:13:56.311 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.321 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:13:56.321 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:13:56.321 -08 000000064 INF: ===================Camera #2 Frame #132===================
17-02-28 20:13:56.335 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:13:56.335 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:13:56.335 -08 000000081 INF: ===================Camera #0 Frame #133===================
17-02-28 20:13:56.370 -08 000000090 INF: RunCopyService queue size at 2/28/2017 8:13:56 PM is 7
17-02-28 20:13:56.438 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.490 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:13:56.490 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:13:56.490 -08 000000064 INF: ===================Camera #2 Frame #139===================
17-02-28 20:13:56.504 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:13:56.504 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:13:56.504 -08 000000081 INF: ===================Camera #0 Frame #139===================
17-02-28 20:13:56.573 -08 000000066 INF: Y Motor: Unshifted Position: 3449493
17-02-28 20:13:56.623 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.662 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:13:56.662 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:13:56.662 -08 000000064 INF: ===================Camera #2 Frame #145===================
17-02-28 20:13:56.674 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:13:56.674 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:13:56.674 -08 000000081 INF: ===================Camera #0 Frame #145===================
17-02-28 20:13:56.749 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:56.831 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:13:56.831 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:13:56.831 -08 000000064 INF: ===================Camera #2 Frame #151===================
17-02-28 20:13:56.844 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:13:56.844 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:13:56.844 -08 000000081 INF: ===================Camera #0 Frame #152===================
17-02-28 20:13:56.887 -08 000000066 INF: Y Motor: Unshifted Position: 3247349
17-02-28 20:13:56.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:56.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-02-28 20:13:56.937 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.000 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:13:57.000 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:13:57.000 -08 000000064 INF: ===================Camera #2 Frame #157===================
17-02-28 20:13:57.017 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:13:57.017 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:13:57.017 -08 000000081 INF: ===================Camera #0 Frame #158===================
17-02-28 20:13:57.060 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.169 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:13:57.169 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:13:57.169 -08 000000064 INF: ===================Camera #2 Frame #164===================
17-02-28 20:13:57.187 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:13:57.187 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:13:57.187 -08 000000081 INF: ===================Camera #0 Frame #164===================
17-02-28 20:13:57.198 -08 000000066 INF: Y Motor: Unshifted Position: 3044985
17-02-28 20:13:57.248 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.341 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:13:57.341 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:13:57.341 -08 000000064 INF: ===================Camera #2 Frame #170===================
17-02-28 20:13:57.356 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:13:57.356 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:13:57.356 -08 000000081 INF: ===================Camera #0 Frame #171===================
17-02-28 20:13:57.374 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.509 -08 000000066 INF: Y Motor: Unshifted Position: 2840673
17-02-28 20:13:57.510 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:13:57.510 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:13:57.510 -08 000000064 INF: ===================Camera #2 Frame #176===================
17-02-28 20:13:57.529 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:13:57.529 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:13:57.529 -08 000000081 INF: ===================Camera #0 Frame #177===================
17-02-28 20:13:57.559 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.679 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:13:57.679 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:13:57.679 -08 000000064 INF: ===================Camera #2 Frame #182===================
17-02-28 20:13:57.685 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.699 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:13:57.699 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:13:57.699 -08 000000081 INF: ===================Camera #0 Frame #183===================
17-02-28 20:13:57.821 -08 000000066 INF: Y Motor: Unshifted Position: 2638522
17-02-28 20:13:57.848 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:13:57.848 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:13:57.848 -08 000000064 INF: ===================Camera #2 Frame #189===================
17-02-28 20:13:57.869 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:13:57.869 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:13:57.869 -08 000000081 INF: ===================Camera #0 Frame #189===================
17-02-28 20:13:57.871 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:57.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.929 -08 000000042 INF: WaitCommand(10000) end
17-02-28 20:13:57.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Deblock===================
17-02-28 20:13:57.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:13:57.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:57.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:57.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:57.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:57.997 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.008 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:58.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:13:58.008 -08 000000042 INF: Valve B1: Go to position 4
17-02-28 20:13:58.008 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:58.020 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:13:58.020 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:13:58.020 -08 000000064 INF: ===================Camera #2 Frame #195===================
17-02-28 20:13:58.039 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:13:58.039 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:13:58.039 -08 000000081 INF: ===================Camera #0 Frame #196===================
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 7\r
17-02-28 20:13:58.085 -08 000000042 INF: Valve B1: 38.577 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:13:58.085 -08 000000042 INF: Valve B1: Taking shortest path 'CC' from 7 to 4
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC4\r
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:13:58.085 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:13:58.135 -08 000000066 INF: Y Motor: Unshifted Position: 2435515
17-02-28 20:13:58.185 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.189 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:13:58.189 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:13:58.189 -08 000000064 INF: ===================Camera #2 Frame #201===================
17-02-28 20:13:58.213 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:13:58.213 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:13:58.213 -08 000000081 INF: ===================Camera #0 Frame #202===================
17-02-28 20:13:58.308 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.358 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:13:58.358 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:13:58.358 -08 000000064 INF: ===================Camera #2 Frame #207===================
17-02-28 20:13:58.383 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:13:58.383 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:13:58.383 -08 000000081 INF: ===================Camera #0 Frame #208===================
17-02-28 20:13:58.446 -08 000000066 INF: Y Motor: Unshifted Position: 2233361
17-02-28 20:13:58.496 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.522 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 4\r
17-02-28 20:13:58.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:58.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:13:58.527 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:13:58.527 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:13:58.527 -08 000000064 INF: ===================Camera #2 Frame #214===================
17-02-28 20:13:58.553 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:13:58.553 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:13:58.553 -08 000000081 INF: ===================Camera #0 Frame #215===================
17-02-28 20:13:58.619 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.699 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:13:58.699 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:13:58.699 -08 000000064 INF: ===================Camera #2 Frame #220===================
17-02-28 20:13:58.726 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:13:58.726 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:13:58.726 -08 000000081 INF: ===================Camera #0 Frame #221===================
17-02-28 20:13:58.757 -08 000000066 INF: Y Motor: Unshifted Position: 2029042
17-02-28 20:13:58.807 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:58.868 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:13:58.868 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:13:58.868 -08 000000064 INF: ===================Camera #2 Frame #226===================
17-02-28 20:13:58.895 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:13:58.895 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:13:58.895 -08 000000081 INF: ===================Camera #0 Frame #227===================
17-02-28 20:13:58.931 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.037 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:13:59.037 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:13:59.037 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:13:59.066 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:13:59.066 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:13:59.066 -08 000000081 INF: ===================Camera #0 Frame #233===================
17-02-28 20:13:59.069 -08 000000066 INF: Y Motor: Unshifted Position: 1826243
17-02-28 20:13:59.119 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.206 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:13:59.206 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:13:59.206 -08 000000064 INF: ===================Camera #2 Frame #239===================
17-02-28 20:13:59.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:13:59.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:13:59.207 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:59.236 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:13:59.236 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:13:59.236 -08 000000081 INF: ===================Camera #0 Frame #240===================
17-02-28 20:13:59.245 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:13:59.264 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:13:59.356 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:13:59.378 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:13:59.378 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:13:59.378 -08 000000064 INF: ===================Camera #2 Frame #245===================
17-02-28 20:13:59.382 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:13:59.382 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:13:59.383 -08 000000066 INF: Y Motor: Unshifted Position: 1623873
17-02-28 20:13:59.409 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:13:59.409 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:13:59.409 -08 000000081 INF: ===================Camera #0 Frame #246===================
17-02-28 20:13:59.433 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.482 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:13:59.547 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:13:59.547 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:13:59.547 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:13:59.556 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.567 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:59.579 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:13:59.579 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:13:59.579 -08 000000081 INF: ===================Camera #0 Frame #252===================
17-02-28 20:13:59.667 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:13:59.694 -08 000000066 INF: Y Motor: Unshifted Position: 1421720
17-02-28 20:13:59.716 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:13:59.716 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:13:59.716 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:13:59.744 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.749 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:13:59.749 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:13:59.749 -08 000000081 INF: ===================Camera #0 Frame #259===================
17-02-28 20:13:59.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:13:59.867 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:13:59.885 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:13:59.885 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:13:59.885 -08 000000064 INF: ===================Camera #2 Frame #264===================
17-02-28 20:13:59.922 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:13:59.922 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:13:59.922 -08 000000081 INF: ===================Camera #0 Frame #265===================
17-02-28 20:14:00.005 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:00.005 -08 000000066 INF: Y Motor: Unshifted Position: 1217403
17-02-28 20:14:00.055 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:00.059 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:14:00.059 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:14:00.059 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:14:00.066 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:00.090 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:14:00.090 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:14:00.090 -08 000000081 INF: ===================Camera #0 Frame #271===================
17-02-28 20:14:00.145 -08 000000037 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:00.145 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:00.147 -08 000000030 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:00.148 -08 000000047 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:00.148 -08 000000062 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:00.148 -08 000000047 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:00.148 -08 000000047 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:00.148 -08 000000047 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:00.148 -08 000000062 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:00.148 -08 000000062 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:00.148 -08 000000062 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:00.148 -08 000000047 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:00.149 -08 000000062 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:00.166 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:14:00.181 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:00.230 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:00.230 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:00.230 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:00.237 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:00.238 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:00.254 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:00.319 -08 000000066 INF: Y Motor: Unshifted Position: 1015257
17-02-28 20:14:00.354 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:00.369 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:00.406 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:00.406 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:00.406 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:00.406 -08 000000081 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:00.406 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:14:00.409 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:00.410 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:00.439 -08 000000064 INF: ======================================
17-02-28 20:14:00.441 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:00.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:14:00.505 -08 000000066 INF: Y Motor: Unshifted Position: 982729
17-02-28 20:14:00.505 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:00.505 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:00.518 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:14:00.518 -08 000000047 INF: Excitation Filter 1: Moved 107 steps in 369.9031 ms
17-02-28 20:14:00.518 -08 000000047 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0146 ms
17-02-28 20:14:00.518 -08 000000047 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.0883 ms
17-02-28 20:14:00.518 -08 000000047 INF: ======================================
17-02-28 20:14:00.541 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP15360R\r
17-02-28 20:14:00.545 -08 000000081 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:00.545 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:00.595 -08 000000055 INF: FPGA: Recv EX2MV
17-02-28 20:14:00.595 -08 000000062 INF: Excitation Filter 2: Moved 107 steps in 446.7982 ms
17-02-28 20:14:00.595 -08 000000062 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 446.9088 ms
17-02-28 20:14:00.595 -08 000000062 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 447.0233 ms
17-02-28 20:14:00.596 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:00.596 -08 000000062 INF: ======================================
17-02-28 20:14:00.597 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:14:00.597 -08 000000066 INF: Y Motor: Moved to 14.8273 after 7893 ms
17-02-28 20:14:00.597 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:00.597 -08 000000030 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:00.598 -08 000000030 INF: ======================================
17-02-28 20:14:00.619 -08 000000081 INF: ======================================
17-02-28 20:14:00.620 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:14:00.622 -08 000000038 INF: ======================================
17-02-28 20:14:00.647 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:00.647 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:00.647 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:00.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:00.707 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:14:00.707 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:00.707 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:00.769 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:00.786 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:00.833 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:00.896 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:14:00.896 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:00.896 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:00.958 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:14:00.958 -08 000000066 INF: ======================================
17-02-28 20:14:00.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:00.960 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:00.961 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:00.961 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:00.971 -08 000000102 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:00.971 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:01.032 -08 000000101 INF: FPGA: Recv TDIYERD 1482730
17-02-28 20:14:01.032 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:01.036 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:01.097 -08 000000051 INF: FPGA: Recv ZADCR 31086
17-02-28 20:14:01.097 -08 000000018 INF: At scan end Y pos = 14.827 and Z pos = -0.119. Y moved -48.539 mm
17-02-28 20:14:01.097 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:01.098 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:01.159 -08 000000081 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:01.159 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:01.159 -08 000000018 INF: TDIScan finished after 12499.0874 ms
17-02-28 20:14:01.159 -08 000000018 INF: Image[0]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:14:01.159 -08 000000018 INF: Image[2]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:14:01.161 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.195 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.110 um
17-02-28 20:14:01.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.196 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:01.220 -08 000000086 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:01.220 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.221 -08 000000106 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:01.221 -08 000000044 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:01.221 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:01.221 -08 000000058 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:01.222 -08 000000058 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:01.222 -08 000000044 INF: ======================================
17-02-28 20:14:01.222 -08 000000058 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:01.222 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:01.222 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:01.222 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:01.222 -08 000000087 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:01.223 -08 000000066 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:01.225 -08 000000087 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:01.251 -08 000000087 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:01.251 -08 000000087 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:01.252 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.252 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.252 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.253 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.253 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.253 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.253 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.253 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:01.269 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:14:01.269 -08 000000104 INF: ======================================
17-02-28 20:14:01.282 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:01.282 -08 000000101 INF: FPGA: Recv ZSEL 
17-02-28 20:14:01.282 -08 000000066 INF: FPGA: Xmit ZDACW 31690\n
17-02-28 20:14:01.282 -08 000000058 INF: ======================================
17-02-28 20:14:01.327 -08 000000081 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.327 -08 000000032 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.327 -08 000000095 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.327 -08 000000034 INF: FC:A, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:01.345 -08 000000064 INF: FPGA: Recv ZDACW 
17-02-28 20:14:01.346 -08 000000066 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:01.346 -08 000000066 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:01.348 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:01.407 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:14:01.407 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:01.408 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:01.408 -08 000000066 INF: ======================================
17-02-28 20:14:01.478 -08 000000081 INF: LFT found best fwhm score 2.000008 in 151 ms
17-02-28 20:14:01.478 -08 000000081 INF: LFT found good score at index 45 with fwhm value 2.000008. Next cycle, cycle 4 starting Z position for top surface is at -0.125 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.478 -08 000000032 INF: LFT found best fwhm score 2.159854 in 151 ms
17-02-28 20:14:01.478 -08 000000032 INF: LFT found good score at index 6817 with fwhm value 2.159854. Next cycle, cycle 4 starting Z position for top surface is at -0.124 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.478 -08 000000095 INF: LFT found best fwhm score 2.000595 in 151 ms
17-02-28 20:14:01.478 -08 000000095 INF: LFT found good score at index 4929 with fwhm value 2.000595. Next cycle, cycle 4 starting Z position for top surface is at -0.125 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.478 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.478 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.479 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.479 -08 000000034 INF: LFT found best fwhm score 2.000003 in 152 ms
17-02-28 20:14:01.479 -08 000000081 INF: ======================================
17-02-28 20:14:01.479 -08 000000034 INF: LFT found good score at index 7857 with fwhm value 2.000003. Next cycle, cycle 4 starting Z position for top surface is at -0.124 mm FC:A, C:3,L:3,T
17-02-28 20:14:01.479 -08 000000032 INF: ======================================
17-02-28 20:14:01.479 -08 000000095 INF: ======================================
17-02-28 20:14:01.479 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:01.479 -08 000000034 INF: ======================================
17-02-28 20:14:01.480 -08 000000087 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:01.481 -08 000000087 INF: LFT weighted average best Z for top surface is at -0.124mm FC:A, C:3,L:3,T
17-02-28 20:14:01.481 -08 000000087 INF: ======================================
17-02-28 20:14:01.482 -08 000000106 INF: ======================================
17-02-28 20:14:01.483 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:01.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:01.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:14:01.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:14:01.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:01.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 12.22293 Y = 39.70011===================
17-02-28 20:14:01.487 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:14:01.487 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:14:01.509 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:14:01.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:14:01.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:14:01.510 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.510 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:01.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:14:01.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:14:01.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:01.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:01.528 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:01.528 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:01.553 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":3,"Tile":1205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF227","HCSMMF277","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.616 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:01.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:01.618 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:14:01.618 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:14:01.626 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":3,"Tile":1204,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF276","HCSMMF287","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:01.708 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":3,"Tile":1201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF255","HCSMMF235","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.715 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":3,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF181","HCSMMF271","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.718 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":3,"Tile":1203,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF238","HCSMMF207","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.720 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":3,"Tile":1207,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF222","HCSMMF264","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.722 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":3,"Tile":1209,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF275","HCSMMF234","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.724 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":3,"Tile":1212,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF251","HCSMMF281","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.726 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":3,"Tile":1214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF278","HCSMMF180","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.732 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":3,"Tile":1208,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF246","HCSMMF223","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.733 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":3,"Tile":1215,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF260","HCSMMF187","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.734 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":3,"Tile":1210,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF208","HCSMMF236","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.746 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":3,"Tile":1213,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF205","HCSMMF263","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.749 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":3,"Tile":1206,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF286","HCSMMF219","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.751 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:01.751 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":3,"Tile":1216,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF273","HCSMMF210","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.752 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":3,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF195","HCSMMF261","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.755 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":3,"Tile":1220,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF256","HCSMMF185","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.759 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":3,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF244","HCSMMF284","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.761 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":3,"Tile":1218,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF221","HCSMMF224","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.765 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":3,"Tile":1217,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF177","HCSMMF186","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.768 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":3,"Tile":1223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF196","HCSMMF203","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.775 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":3,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF245","HCSMMF242","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.777 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":3,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF243","HCSMMF257","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.778 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":3,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF266","HCSMMF199","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.780 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":3,"Tile":1228,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF231","HCSMMF212","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.781 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":3,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF265","HCSMMF240","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.783 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":3,"Tile":1225,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF201","HCSMMF200","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.786 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":3,"Tile":1227,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF241","HCSMMF280","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:01.788 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.794 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:01.899 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.899 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:01.936 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:01.942 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:02.000 -08 000000055 INF: FPGA: Recv MIOCOMPR
17-02-28 20:14:02.000 -08 000000018 INF: Compensator: Moved OutOfPath in 382 ms
17-02-28 20:14:02.000 -08 000000018 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:02.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.003 -08 000000050 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:02.003 -08 000000098 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:02.003 -08 000000087 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:02.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.003 -08 000000050 INF: ======================================
17-02-28 20:14:02.004 -08 000000087 INF: ======================================
17-02-28 20:14:02.004 -08 000000098 INF: ======================================
17-02-28 20:14:02.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.007 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:02.013 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:14:02.023 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:14:02.023 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:02.023 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:02.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.023 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.027 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:14:02.027 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:14:02.027 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:14:02.029 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:02.035 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:02.064 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:02.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.065 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:02.065 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:02.065 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1209 mm
17-02-28 20:14:02.065 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:02.126 -08 000000044 INF: FPGA: Recv ZTRG 
17-02-28 20:14:02.126 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:02.187 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:14:02.187 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:02.187 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:14:02.189 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:02.195 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:02.251 -08 000000076 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:02.251 -08 000000076 INF: FPGA: Recv ZMV 
17-02-28 20:14:02.251 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:02.251 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.164 ms
17-02-28 20:14:02.251 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:02.293 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:02.313 -08 000000047 INF: FPGA: Recv ZDACR 60292
17-02-28 20:14:02.313 -08 000000018 INF: Z Motor: MoveAndTrigger took 248.2245 ms w/comms
17-02-28 20:14:02.313 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:02.313 -08 000000018 INF: Z Motor: MoveAbsStepped took 248.5066 ms
17-02-28 20:14:02.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.314 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:14:02.315 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.323 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:02.324 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.324 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.324 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:14:02.324 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:14:02.374 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:02.376 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:02.385 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:02.385 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:14:02.393 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:02.393 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.393 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:02.396 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:14:02.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:02.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:02.398 -08 000000030 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:02.398 -08 000000104 INF: ===================Move X,Y===================
17-02-28 20:14:02.399 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:02.399 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:02.399 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:02.399 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:02.399 -08 000000104 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:02.399 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:02.399 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:02.400 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:02.400 -08 000000055 INF: ===================Move X Motor without settling===================
17-02-28 20:14:02.400 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:02.400 -08 000000055 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:02.400 -08 000000086 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8273 mm
17-02-28 20:14:02.400 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:02.400 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:02.400 -08 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:02.400 -08 000000089 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:02.400 -08 000000090 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:02.400 -08 000000032 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:02.400 -08 000000089 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:02.400 -08 000000108 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:02.401 -08 000000076 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:02.401 -08 000000029 INF: ======================================
17-02-28 20:14:02.401 -08 000000076 INF: ======================================
17-02-28 20:14:02.401 -08 000000032 INF: ======================================
17-02-28 20:14:02.402 -08 000000090 INF: ======================================
17-02-28 20:14:02.402 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:02.403 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:02.403 -08 000000032 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:02.403 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:02.404 -08 000000087 INF: ======================================
17-02-28 20:14:02.404 -08 000000089 INF: ======================================
17-02-28 20:14:02.404 -08 000000052 INF: ======================================
17-02-28 20:14:02.404 -08 000000032 INF: ======================================
17-02-28 20:14:02.405 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:02.406 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:02.406 -08 000000108 INF: ======================================
17-02-28 20:14:02.406 -08 000000047 INF: ======================================
17-02-28 20:14:02.407 -08 000000109 INF: ======================================
17-02-28 20:14:02.408 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:02.409 -08 000000066 INF: ======================================
17-02-28 20:14:02.410 -08 000000030 INF: ======================================
17-02-28 20:14:02.438 -08 000000055 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:02.438 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.438 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:02.438 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:02.438 -08 000000055 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Moving to 14.4339 mm @15.000 mm/sec, started at 12.2349 mm
17-02-28 20:14:02.502 -08 000000055 INF: X Motor: Xmit MA -18254\n
17-02-28 20:14:02.504 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.504 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:02.564 -08 000000055 INF: X Motor: Recv MA -18254\r\n>
17-02-28 20:14:02.564 -08 000000055 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:14:02.566 -08 000000086 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:14:02.575 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:02.626 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.626 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.626 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:14:02.626 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:02.688 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:02.688 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:02.688 -08 000000086 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:02.688 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:02.812 -08 000000086 INF: Y Motor: Unshifted Position: 1063785
17-02-28 20:14:02.862 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:02.938 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:02.989 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.000 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:03.124 -08 000000086 INF: Y Motor: Unshifted Position: 1776905
17-02-28 20:14:03.174 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.190 -08 000000055 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:03.249 -08 000000055 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:03.249 -08 000000055 INF: X Motor: Moved to 14.4346 after 685 ms
17-02-28 20:14:03.249 -08 000000055 INF: ======================================
17-02-28 20:14:03.250 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:03.299 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.313 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:03.439 -08 000000086 INF: Y Motor: Unshifted Position: 2557758
17-02-28 20:14:03.489 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:03.615 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.624 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:03.751 -08 000000086 INF: Y Motor: Unshifted Position: 3332700
17-02-28 20:14:03.801 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:03.924 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:03.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.062 -08 000000086 INF: Y Motor: Unshifted Position: 4115264
17-02-28 20:14:04.112 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:04.235 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.249 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.374 -08 000000086 INF: Y Motor: Unshifted Position: 4896028
17-02-28 20:14:04.424 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.499 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:04.547 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.686 -08 000000086 INF: Y Motor: Unshifted Position: 5669802
17-02-28 20:14:04.736 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.809 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:04.860 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:04.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:04.997 -08 000000086 INF: Y Motor: Unshifted Position: 5947057
17-02-28 20:14:04.997 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:04.997 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:05.059 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:05.059 -08 000000086 INF: Y Motor: Moved to 64.4706 after 2371 ms
17-02-28 20:14:05.059 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:05.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:05.124 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:05.124 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:05.124 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:05.184 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:05.185 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:05.185 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:05.185 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:05.247 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:05.309 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:05.372 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:05.372 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:05.372 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:05.437 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:05.440 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:14:05.440 -08 000000086 INF: ======================================
17-02-28 20:14:05.441 -08 000000104 INF: ===================Move X,Y===================
17-02-28 20:14:05.443 -08 000000104 INF: ======================================
17-02-28 20:14:05.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:05.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:05.445 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:14:05.445 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:14:05.498 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:05.499 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:05.499 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:14:05.558 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:05.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:05.559 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:05.559 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:05.620 -08 000000030 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:14:05.620 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:14:05.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:05.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:05.622 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.623 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:05.623 -08 000000108 INF: ======================================
17-02-28 20:14:05.623 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:05.624 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.625 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:05.626 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:05.626 -08 000000085 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:14:05.682 -08 000000100 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:05.682 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:05.684 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:05.684 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:14:05.745 -08 000000057 INF: FPGA: Recv TDIYARM2
17-02-28 20:14:05.746 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:05.748 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:05.748 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.750 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:05.750 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:05.753 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:05.754 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:05.755 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:05.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.058 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:06.120 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.127 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:06.127 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:06.127 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:06.142 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:06.144 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:06.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:06.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.533 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53955604608 imgPtr = 54022574152 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:06.534 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:06.534 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:06.549 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:06.551 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:06.552 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:06.553 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:06.554 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:06.554 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:06.556 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:06.556 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:06.556 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:14:06.556 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:14:06.619 -08 000000076 INF: FPGA: Recv ZYT 
17-02-28 20:14:06.619 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:14:06.619 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:14:06.681 -08 000000066 INF: FPGA: Recv ZARM
17-02-28 20:14:06.681 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8477 ms
17-02-28 20:14:06.681 -08 000000085 INF: Z Motor: ArmAbsStepped took 124.9864 ms
17-02-28 20:14:06.682 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:06.682 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:06.684 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:14:06.686 -08 000000085 INF: ======================================
17-02-28 20:14:06.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:06.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:06.688 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:06.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:06.690 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:06.690 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:06.691 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:06.691 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:06.691 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:06.691 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:06.691 -08 000000104 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:06.691 -08 000000104 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:06.691 -08 000000104 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:06.691 -08 000000104 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:06.692 -08 000000104 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:06.745 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:06.995 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.055 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:14:07.055 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:14:07.055 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 364.2664 ms
17-02-28 20:14:07.055 -08 000000104 INF: Excitation Filter 2: Moved -107 steps in 363.8379 ms
17-02-28 20:14:07.055 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 364.4022 ms
17-02-28 20:14:07.055 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 364.5116 ms
17-02-28 20:14:07.055 -08 000000104 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.0303 ms
17-02-28 20:14:07.055 -08 000000104 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.1589 ms
17-02-28 20:14:07.055 -08 000000089 INF: ======================================
17-02-28 20:14:07.056 -08 000000104 INF: ======================================
17-02-28 20:14:07.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:07.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:07.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:07.060 -08 000000050 INF: ===================Serial===================
17-02-28 20:14:07.060 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:07.061 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:07.061 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:07.061 -08 000000050 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:14:07.061 -08 000000064 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:14:07.061 -08 000000050 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:07.061 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:07.061 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:07.062 -08 000000086 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:07.062 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:07.062 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:07.063 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:07.063 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:14:07.063 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.063 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.064 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.064 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.119 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.119 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:07.119 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:07.183 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.183 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:07.214 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.214 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.214 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.214 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:14:07.245 -08 000000064 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:14:07.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.308 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.308 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:14:07.308 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:07.364 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.364 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.364 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.364 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.369 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:07.370 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:07.370 -08 000000064 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:14:07.370 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.494 -08 000000064 INF: Y Motor: Unshifted Position: 5929033
17-02-28 20:14:07.514 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.514 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.514 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:07.514 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:07.544 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.664 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:07.664 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:07.664 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:07.664 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:07.664 -08 000000066 INF: ===================Camera #0 Frame #1===================
17-02-28 20:14:07.664 -08 000000052 INF: ===================Camera #2 Frame #1===================
17-02-28 20:14:07.668 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.679 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:07.806 -08 000000064 INF: Y Motor: Unshifted Position: 5882226
17-02-28 20:14:07.819 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:07.819 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:07.819 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:07.819 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:07.819 -08 000000052 INF: ===================Camera #2 Frame #3===================
17-02-28 20:14:07.819 -08 000000066 INF: ===================Camera #0 Frame #3===================
17-02-28 20:14:07.856 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.929 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:07.975 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:07.975 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:07.975 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:07.975 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:07.975 -08 000000052 INF: ===================Camera #2 Frame #4===================
17-02-28 20:14:07.975 -08 000000066 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:07.982 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:07.991 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.119 -08 000000064 INF: Y Motor: Unshifted Position: 5835225
17-02-28 20:14:08.128 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:08.128 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:08.128 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:08.128 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:08.128 -08 000000066 INF: ===================Camera #0 Frame #5===================
17-02-28 20:14:08.128 -08 000000052 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:08.169 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:08.179 -08 000000098 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:08.179 -08 000000098 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:08.179 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:08.180 -08 000000050 INF: ===================Serial===================
17-02-28 20:14:08.181 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:08.182 -08 000000050 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:14:08.182 -08 000000050 INF: ===================Serial===================
17-02-28 20:14:08.182 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:08.183 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:08.183 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:08.183 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:08.183 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:08.183 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:08.183 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:08.183 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:08.183 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:08.184 -08 000000050 INF: ======================================
17-02-28 20:14:08.189 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:08.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:08.282 -08 000000066 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:08.282 -08 000000066 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:08.282 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:08.282 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:08.282 -08 000000066 INF: ===================Camera #0 Frame #6===================
17-02-28 20:14:08.282 -08 000000052 INF: ===================Camera #2 Frame #6===================
17-02-28 20:14:08.285 -08 000000066 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:08.285 -08 000000052 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:08.286 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:08.289 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:08.293 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:08.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.312 -08 000000052 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:08.312 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:14:08.313 -08 000000052 INF: ======================================
17-02-28 20:14:08.336 -08 000000066 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:08.336 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:08.337 -08 000000066 INF: ======================================
17-02-28 20:14:08.339 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:08.340 -08 000000086 INF: ======================================
17-02-28 20:14:08.431 -08 000000064 INF: Y Motor: Unshifted Position: 5790759
17-02-28 20:14:08.481 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:08.554 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:08.555 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:14:08.555 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:14:08.555 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 371.5295 ms
17-02-28 20:14:08.555 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 372.1879 ms
17-02-28 20:14:08.555 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.6774 ms
17-02-28 20:14:08.555 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.8705 ms
17-02-28 20:14:08.555 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3549 ms
17-02-28 20:14:08.555 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5316 ms
17-02-28 20:14:08.555 -08 000000095 INF: ======================================
17-02-28 20:14:08.556 -08 000000032 INF: ======================================
17-02-28 20:14:08.557 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:08.558 -08 000000038 INF: ======================================
17-02-28 20:14:08.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.619 -08 000000064 INF: Y Motor: Unshifted Position: 5790745
17-02-28 20:14:08.619 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:08.619 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:08.679 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:08.679 -08 000000064 INF: Y Motor: Moved to 62.9075 after 1309 ms
17-02-28 20:14:08.679 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:08.741 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:08.741 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:08.741 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:08.805 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:08.805 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:08.805 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:08.867 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:08.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:08.930 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:08.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:08.995 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:08.995 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:08.995 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:09.053 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:14:09.053 -08 000000064 INF: ======================================
17-02-28 20:14:09.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:09.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:09.057 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.057 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:09.116 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:09.116 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:09.178 -08 000000081 INF: FPGA: Recv TDIYERD 6290746
17-02-28 20:14:09.178 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:09.180 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:09.239 -08 000000101 INF: FPGA: Recv ZADCR 2426
17-02-28 20:14:09.239 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:14:09.239 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:09.240 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:09.301 -08 000000081 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:14:09.301 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:14:09.301 -08 000000018 INF: TDIScan finished after 6915.6263 ms
17-02-28 20:14:09.301 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:09.301 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:09.301 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:09.365 -08 000000057 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:09.366 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.366 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.367 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:09.367 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:09.367 -08 000000058 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:09.368 -08 000000086 INF: ======================================
17-02-28 20:14:09.368 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:09.368 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:09.368 -08 000000058 INF: ======================================
17-02-28 20:14:09.429 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:14:09.429 -08 000000038 INF: ======================================
17-02-28 20:14:09.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.431 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:09.458 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.458 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:09.490 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:09.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:09.556 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:09.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:09.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:09.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:09.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:09.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:14:09.637 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:09.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:14:09.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:14:09.806 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:09.863 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:10.113 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:10.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:10.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:14:10.295 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0549773124794038Best Z position at top surface = -0.125619153844204Best Z position at top surface + compensator offset = -0.102919153844204 C:3,L:4,T
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.125619153844204
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.74837
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0549773124794038
17-02-28 20:14:10.296 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.4082
17-02-28 20:14:10.296 -08 000000018 INF: Z-height at LaneTopSurface is -0.125619153844204.
17-02-28 20:14:10.296 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:10.426 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:10.429 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:10.429 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:10.488 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:10.488 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:14:10.489 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:10.490 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.490 -08 000000018 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:10.490 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.491 -08 000000010 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:10.492 -08 000000047 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:10.492 -08 000000086 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:10.492 -08 000000010 INF: ======================================
17-02-28 20:14:10.492 -08 000000086 INF: ======================================
17-02-28 20:14:10.492 -08 000000047 INF: ======================================
17-02-28 20:14:10.493 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.494 -08 000000018 INF: ETF Best Z: -0.1029192 mm (26979 DAC)
17-02-28 20:14:10.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.495 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.495 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:14:10.495 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:14:10.939 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:10.939 -08 000000053 INF: FPGA: Recv MIOCOMPF
17-02-28 20:14:10.939 -08 000000018 INF: Compensator: Moved IntoPath in 444 ms
17-02-28 20:14:10.940 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.941 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:10.947 -08 000000018 INF: Swath 1 position calculated to be: {X=13.87993, Y=39.70011} from estimated center X= 14.357, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:10.947 -08 000000018 INF: Swath 2 position calculated to be: {X=14.98793, Y=39.70011} from estimated center X= 14.357, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:10.953 -08 000000018 INF: Swath 0: Converted transform from (62.4199, -34.96278) pixels to (0.02139, -0.012075) mm.
17-02-28 20:14:10.959 -08 000000018 INF: Swath 1: Converted transform from (38.86206, -32.46041) pixels to (0.013455, -0.01104) mm.
17-02-28 20:14:10.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:10.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:10.960 -08 000000018 INF: Transformed XStagePosition from 13.87993 mm to 13.901320496574 mm.
17-02-28 20:14:10.971 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4780413325653 mm.
17-02-28 20:14:10.971 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2780413325653 mm.
17-02-28 20:14:10.971 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3687913325652 mm.
17-02-28 20:14:10.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:10.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:10.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:10.974 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:14:10.979 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:10.980 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:10.980 -08 000000051 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:10.981 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:10.981 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:14:10.981 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:10.981 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:10.981 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:10.981 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:10.981 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:10.982 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:10.982 -08 000000032 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:10.982 -08 000000032 INF: Z Motor: Moving to -0.1229 mm, started at -0.0100 mm
17-02-28 20:14:10.982 -08 000000032 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:10.982 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:10.982 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:10.982 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:10.982 -08 000000062 INF: ===================Move X Motor without settling===================
17-02-28 20:14:10.983 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:10.983 -08 000000062 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:10.983 -08 000000089 INF: Y Motor: Moving to 64.4780 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:14:10.983 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:10.983 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:10.983 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:10.983 -08 000000098 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:10.983 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:10.983 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:10.983 -08 000000057 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:10.983 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:10.984 -08 000000057 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:10.984 -08 000000101 INF: ======================================
17-02-28 20:14:10.984 -08 000000037 INF: ======================================
17-02-28 20:14:10.984 -08 000000057 INF: ======================================
17-02-28 20:14:10.984 -08 000000064 INF: ======================================
17-02-28 20:14:10.985 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:10.986 -08 000000057 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:10.986 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:10.986 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:10.986 -08 000000057 INF: ======================================
17-02-28 20:14:10.986 -08 000000038 INF: ======================================
17-02-28 20:14:10.987 -08 000000052 INF: ======================================
17-02-28 20:14:10.987 -08 000000086 INF: ======================================
17-02-28 20:14:10.987 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:10.988 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:10.989 -08 000000047 INF: ======================================
17-02-28 20:14:10.989 -08 000000066 INF: ======================================
17-02-28 20:14:10.989 -08 000000098 INF: ======================================
17-02-28 20:14:10.990 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:10.991 -08 000000095 INF: ======================================
17-02-28 20:14:10.992 -08 000000051 INF: ======================================
17-02-28 20:14:11.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:11.003 -08 000000087 INF: FPGA: Recv ZTRG 
17-02-28 20:14:11.003 -08 000000032 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:11.003 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:11.003 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:11.003 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:14:11.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-02-28 20:14:11.063 -08 000000066 INF: FPGA: Recv ZYT 
17-02-28 20:14:11.063 -08 000000032 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:11.063 -08 000000032 INF: FPGA: Xmit ZMV 32222\n
17-02-28 20:14:11.065 -08 000000062 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:11.065 -08 000000062 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:11.065 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.065 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:11.065 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Moving to 13.9013 mm @15.000 mm/sec, started at 14.4346 mm
17-02-28 20:14:11.130 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.130 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:11.130 -08 000000062 INF: X Motor: Xmit MA -18472\n
17-02-28 20:14:11.130 -08 000000087 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:11.130 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:11.192 -08 000000062 INF: X Motor: Recv MA -18472\r\n>
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:11.192 -08 000000062 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Set target position to 5947804 encoder counts
17-02-28 20:14:11.192 -08 000000089 INF: Y Motor: Xmit s r0xca 5947804\r
17-02-28 20:14:11.252 -08 000000037 INF: FPGA: Recv ZMV 
17-02-28 20:14:11.252 -08 000000032 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.9494 ms
17-02-28 20:14:11.252 -08 000000032 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:11.254 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.254 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:14:11.254 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:11.314 -08 000000058 INF: FPGA: Recv ZDACR 32222
17-02-28 20:14:11.314 -08 000000032 INF: Z Motor: MoveAndTrigger took 332.1481 ms w/comms
17-02-28 20:14:11.314 -08 000000032 INF: Z Motor: After move to -0.1229, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:11.314 -08 000000032 INF: Z Motor: MoveAbsStepped took 332.315 ms
17-02-28 20:14:11.315 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:11.316 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:11.316 -08 000000089 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:14:11.316 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:11.316 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:11.317 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.317 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:14:11.317 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.318 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:11.318 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:11.319 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:11.319 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:11.319 -08 000000038 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:11.376 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:14:11.377 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:11.377 -08 000000038 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:11.438 -08 000000044 INF: FPGA: Recv TDIBB
17-02-28 20:14:11.438 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:11.440 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:11.440 -08 000000089 INF: Y Motor: Unshifted Position: 5872629
17-02-28 20:14:11.440 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.441 -08 000000038 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:11.442 -08 000000038 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:11.442 -08 000000038 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:11.490 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:11.500 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:11.500 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.502 -08 000000038 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:11.502 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.504 -08 000000038 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:11.504 -08 000000038 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:11.504 -08 000000038 INF: Z Motor: Arming to move to -0.0829 mm
17-02-28 20:14:11.504 -08 000000038 INF: FPGA: Xmit ZYT 6427804 4\n
17-02-28 20:14:11.565 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:14:11.565 -08 000000038 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372629 enc / 63.726 mm / ) = 6427804 enc / 64.278 mm
17-02-28 20:14:11.565 -08 000000038 INF: FPGA: Xmit ZARM 21736\n
17-02-28 20:14:11.617 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:11.627 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:14:11.627 -08 000000038 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.6017 ms
17-02-28 20:14:11.627 -08 000000038 INF: Z Motor: ArmAbsStepped took 122.6895 ms
17-02-28 20:14:11.627 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:11.629 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.629 -08 000000062 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:11.630 -08 000000038 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:11.631 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.632 -08 000000038 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:11.633 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:14:11.634 -08 000000038 INF: ======================================
17-02-28 20:14:11.691 -08 000000062 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:11.691 -08 000000062 INF: X Motor: Moved to 13.9023 after 498 ms
17-02-28 20:14:11.691 -08 000000062 INF: ======================================
17-02-28 20:14:11.753 -08 000000089 INF: Y Motor: Unshifted Position: 5947805
17-02-28 20:14:11.753 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:11.753 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:11.815 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:11.815 -08 000000089 INF: Y Motor: Moved to 64.4781 after 498 ms
17-02-28 20:14:11.815 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:11.877 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:11.877 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:11.877 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:11.939 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:11.939 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:11.939 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:12.001 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:12.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:12.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:12.066 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:12.128 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:12.128 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:12.128 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:12.190 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:14:12.190 -08 000000089 INF: ======================================
17-02-28 20:14:12.191 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:14:12.192 -08 000000030 INF: ======================================
17-02-28 20:14:12.237 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:12.237 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:12.237 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:12.252 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:12.254 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:13.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:13.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-02-28 20:14:13.277 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:13.277 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:13.277 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:13.292 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:13.294 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:14:13.295 -08 000000057 INF: ======================================
17-02-28 20:14:13.296 -08 000000032 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:13.297 -08 000000032 INF: ======================================
17-02-28 20:14:13.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:13.299 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:13.299 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:14:13.299 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:14:13.377 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:13.377 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:14:13.435 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:13.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:13.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:13.435 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:13.499 -08 000000045 INF: FPGA: Recv TDIYERD 6447805
17-02-28 20:14:13.499 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447805 counts (64.478 mm)
17-02-28 20:14:13.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:13.500 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:13.501 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:13.501 -08 000000098 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:13.501 -08 000000098 INF: ======================================
17-02-28 20:14:13.502 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:13.502 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:13.502 -08 000000051 INF: FPGA: Xmit TDIYPOS 6336879\n
17-02-28 20:14:13.559 -08 000000104 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:13.559 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:13.560 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:13.561 -08 000000051 INF: FPGA: Xmit TDIYARM3 139264 6427804 1 1\n
17-02-28 20:14:13.624 -08 000000055 INF: FPGA: Recv TDIYARM3
17-02-28 20:14:13.624 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:13.625 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:13.626 -08 000000051 INF: ======================================
17-02-28 20:14:13.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:13.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:13.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.630 -08 000000034 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:13.630 -08 000000030 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:13.630 -08 000000034 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:13.630 -08 000000034 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:13.630 -08 000000034 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:13.630 -08 000000030 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:13.630 -08 000000034 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:13.630 -08 000000030 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:13.630 -08 000000030 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:13.631 -08 000000030 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:13.996 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:14:13.996 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:14:13.996 -08 000000030 INF: Excitation Filter 1: Moved -107 steps in 365.6134 ms
17-02-28 20:14:13.996 -08 000000030 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.7722 ms
17-02-28 20:14:13.996 -08 000000030 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.8445 ms
17-02-28 20:14:13.996 -08 000000034 INF: Excitation Filter 2: Moved -107 steps in 365.8316 ms
17-02-28 20:14:13.996 -08 000000034 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.0216 ms
17-02-28 20:14:13.996 -08 000000034 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.0924 ms
17-02-28 20:14:13.996 -08 000000030 INF: ======================================
17-02-28 20:14:13.996 -08 000000034 INF: ======================================
17-02-28 20:14:13.997 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:13.999 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:13.999 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:13.999 -08 000000029 INF: ===================FPGA Z Wait===================
17-02-28 20:14:14.000 -08 000000044 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:14.000 -08 000000044 INF: Y Motor: Moving to 14.8297 mm @6.500 mm/sec, started at 64.4781 mm
17-02-28 20:14:14.000 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:14.000 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:14.000 -08 000000086 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:14.000 -08 000000069 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:14.000 -08 000000069 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:14.001 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:14:14.001 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:14.002 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.002 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.003 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.003 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.003 -08 000000029 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:14.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:14.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:14:14.060 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.060 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:14.060 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:14.125 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.125 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:14.152 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.152 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.153 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.153 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Set target position to 982970 encoder counts
17-02-28 20:14:14.187 -08 000000044 INF: Y Motor: Xmit s r0xca 982970\r
17-02-28 20:14:14.249 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.249 -08 000000044 INF: Y Motor: Start the move command
17-02-28 20:14:14.249 -08 000000044 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:14.302 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.302 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.303 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:14.303 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:14.312 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:14.312 -08 000000044 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:14:14.312 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.371 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:14.371 -08 000000029 INF: ======================================
17-02-28 20:14:14.435 -08 000000044 INF: Y Motor: Unshifted Position: 5885946
17-02-28 20:14:14.452 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:14.452 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:14.452 -08 000000058 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:14.453 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:14.453 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:14.453 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:14.485 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.613 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.615 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:14:14.615 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:14:14.615 -08 000000058 INF: ===================Camera #0 Frame #10===================
17-02-28 20:14:14.620 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:14.620 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:14.620 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:14:14.750 -08 000000044 INF: Y Motor: Unshifted Position: 5682284
17-02-28 20:14:14.785 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:14.785 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:14.785 -08 000000058 INF: ===================Camera #0 Frame #17===================
17-02-28 20:14:14.790 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:14.790 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:14.790 -08 000000081 INF: ===================Camera #2 Frame #17===================
17-02-28 20:14:14.800 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.923 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:14.958 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:14.958 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:14.958 -08 000000058 INF: ===================Camera #0 Frame #23===================
17-02-28 20:14:14.960 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:14.960 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:14.960 -08 000000081 INF: ===================Camera #2 Frame #23===================
17-02-28 20:14:15.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:15.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-02-28 20:14:15.059 -08 000000044 INF: Y Motor: Unshifted Position: 5480789
17-02-28 20:14:15.109 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.128 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:14:15.128 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:14:15.128 -08 000000058 INF: ===================Camera #0 Frame #29===================
17-02-28 20:14:15.131 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:14:15.131 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:14:15.131 -08 000000081 INF: ===================Camera #2 Frame #29===================
17-02-28 20:14:15.236 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.298 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:15.298 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:15.298 -08 000000058 INF: ===================Camera #0 Frame #36===================
17-02-28 20:14:15.302 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:15.302 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:15.302 -08 000000081 INF: ===================Camera #2 Frame #36===================
17-02-28 20:14:15.372 -08 000000044 INF: Y Motor: Unshifted Position: 5276467
17-02-28 20:14:15.422 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.471 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:15.471 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:15.471 -08 000000058 INF: ===================Camera #0 Frame #42===================
17-02-28 20:14:15.476 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:15.476 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:15.476 -08 000000081 INF: ===================Camera #2 Frame #42===================
17-02-28 20:14:15.546 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.641 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:14:15.641 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:14:15.641 -08 000000058 INF: ===================Camera #0 Frame #48===================
17-02-28 20:14:15.646 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:14:15.646 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:14:15.646 -08 000000081 INF: ===================Camera #2 Frame #48===================
17-02-28 20:14:15.685 -08 000000044 INF: Y Motor: Unshifted Position: 5074748
17-02-28 20:14:15.735 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.811 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:14:15.811 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:14:15.811 -08 000000058 INF: ===================Camera #0 Frame #54===================
17-02-28 20:14:15.817 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:14:15.817 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:14:15.817 -08 000000081 INF: ===================Camera #2 Frame #55===================
17-02-28 20:14:15.859 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:15.981 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:15.981 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:15.981 -08 000000058 INF: ===================Camera #0 Frame #61===================
17-02-28 20:14:15.991 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:15.991 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:15.991 -08 000000081 INF: ===================Camera #2 Frame #61===================
17-02-28 20:14:15.995 -08 000000044 INF: Y Motor: Unshifted Position: 4871307
17-02-28 20:14:16.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:16.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:16.004 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:14:16.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:16.045 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.103 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:16.152 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:14:16.152 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:14:16.152 -08 000000058 INF: ===================Camera #0 Frame #67===================
17-02-28 20:14:16.160 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:14:16.160 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:14:16.160 -08 000000081 INF: ===================Camera #2 Frame #67===================
17-02-28 20:14:16.172 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.183 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:14:16.183 -08 000000042 INF: Current Position of Pump is: 15360
17-02-28 20:14:16.284 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:16.309 -08 000000044 INF: Y Motor: Unshifted Position: 4667853
17-02-28 20:14:16.321 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:14:16.321 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:14:16.321 -08 000000058 INF: ===================Camera #0 Frame #73===================
17-02-28 20:14:16.330 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:14:16.330 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:14:16.330 -08 000000081 INF: ===================Camera #2 Frame #74===================
17-02-28 20:14:16.359 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:14:16.371 -08 000000042 INF: Current Position of Pump is: 15360
17-02-28 20:14:16.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-02-28 20:14:16.471 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD15360R\r
17-02-28 20:14:16.483 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.491 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:14:16.491 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:14:16.491 -08 000000058 INF: ===================Camera #0 Frame #79===================
17-02-28 20:14:16.504 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:14:16.504 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:14:16.504 -08 000000081 INF: ===================Camera #2 Frame #80===================
17-02-28 20:14:16.556 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:16.622 -08 000000044 INF: Y Motor: Unshifted Position: 4465906
17-02-28 20:14:16.656 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:16.661 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:14:16.661 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:14:16.661 -08 000000058 INF: ===================Camera #0 Frame #86===================
17-02-28 20:14:16.672 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.675 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:14:16.675 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:14:16.675 -08 000000081 INF: ===================Camera #2 Frame #86===================
17-02-28 20:14:16.683 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:16.796 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.834 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:14:16.834 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:14:16.834 -08 000000058 INF: ===================Camera #0 Frame #92===================
17-02-28 20:14:16.846 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:14:16.846 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:14:16.846 -08 000000081 INF: ===================Camera #2 Frame #93===================
17-02-28 20:14:16.932 -08 000000044 INF: Y Motor: Unshifted Position: 4262461
17-02-28 20:14:16.933 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:16.982 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:16.993 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:17.004 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:14:17.004 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:14:17.004 -08 000000058 INF: ===================Camera #0 Frame #98===================
17-02-28 20:14:17.020 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:14:17.020 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:14:17.020 -08 000000081 INF: ===================Camera #2 Frame #99===================
17-02-28 20:14:17.109 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.174 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:14:17.174 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:14:17.174 -08 000000058 INF: ===================Camera #0 Frame #105===================
17-02-28 20:14:17.191 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:14:17.191 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:14:17.191 -08 000000081 INF: ===================Camera #2 Frame #105===================
17-02-28 20:14:17.243 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:17.246 -08 000000044 INF: Y Motor: Unshifted Position: 4060305
17-02-28 20:14:17.296 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:17.347 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:14:17.347 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:14:17.347 -08 000000058 INF: ===================Camera #0 Frame #111===================
17-02-28 20:14:17.362 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:14:17.362 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:14:17.362 -08 000000081 INF: ===================Camera #2 Frame #112===================
17-02-28 20:14:17.420 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.517 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:14:17.517 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:14:17.517 -08 000000058 INF: ===================Camera #0 Frame #117===================
17-02-28 20:14:17.536 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:14:17.536 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:14:17.536 -08 000000081 INF: ===================Camera #2 Frame #118===================
17-02-28 20:14:17.556 -08 000000044 INF: Y Motor: Unshifted Position: 3856640
17-02-28 20:14:17.557 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:17.606 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.617 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:17.687 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:14:17.687 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:14:17.687 -08 000000058 INF: ===================Camera #0 Frame #124===================
17-02-28 20:14:17.707 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:14:17.707 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:14:17.707 -08 000000081 INF: ===================Camera #2 Frame #124===================
17-02-28 20:14:17.730 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.860 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:14:17.860 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:14:17.860 -08 000000058 INF: ===================Camera #0 Frame #130===================
17-02-28 20:14:17.867 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:17.871 -08 000000044 INF: Y Motor: Unshifted Position: 3654489
17-02-28 20:14:17.878 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:14:17.878 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:14:17.878 -08 000000081 INF: ===================Camera #2 Frame #131===================
17-02-28 20:14:17.921 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:17.931 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:18.029 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:14:18.029 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:14:18.029 -08 000000058 INF: ===================Camera #0 Frame #136===================
17-02-28 20:14:18.046 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.052 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:14:18.052 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:14:18.052 -08 000000081 INF: ===================Camera #2 Frame #137===================
17-02-28 20:14:18.180 -08 000000044 INF: Y Motor: Unshifted Position: 3450167
17-02-28 20:14:18.181 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:18.199 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:14:18.199 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:14:18.199 -08 000000058 INF: ===================Camera #0 Frame #142===================
17-02-28 20:14:18.223 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:14:18.223 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:14:18.223 -08 000000081 INF: ===================Camera #2 Frame #143===================
17-02-28 20:14:18.230 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:18.354 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.369 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:14:18.369 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:14:18.369 -08 000000058 INF: ===================Camera #0 Frame #149===================
17-02-28 20:14:18.394 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:14:18.394 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:14:18.394 -08 000000081 INF: ===================Camera #2 Frame #150===================
17-02-28 20:14:18.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:18.494 -08 000000044 INF: Y Motor: Unshifted Position: 3248669
17-02-28 20:14:18.542 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:14:18.542 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:14:18.542 -08 000000058 INF: ===================Camera #0 Frame #155===================
17-02-28 20:14:18.544 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.555 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:18.568 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:14:18.568 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:14:18.568 -08 000000081 INF: ===================Camera #2 Frame #156===================
17-02-28 20:14:18.668 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.712 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:14:18.712 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:14:18.712 -08 000000058 INF: ===================Camera #0 Frame #161===================
17-02-28 20:14:18.738 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:14:18.738 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:14:18.738 -08 000000081 INF: ===================Camera #2 Frame #162===================
17-02-28 20:14:18.804 -08 000000044 INF: Y Motor: Unshifted Position: 3045010
17-02-28 20:14:18.805 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:18.854 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:18.865 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:18.865 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:14:18.865 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:14:18.882 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:14:18.882 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:14:18.882 -08 000000058 INF: ===================Camera #0 Frame #168===================
17-02-28 20:14:18.909 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:14:18.909 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:14:18.909 -08 000000081 INF: ===================Camera #2 Frame #169===================
17-02-28 20:14:18.978 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.055 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:14:19.055 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:14:19.055 -08 000000058 INF: ===================Camera #0 Frame #174===================
17-02-28 20:14:19.083 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:14:19.083 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:14:19.083 -08 000000081 INF: ===================Camera #2 Frame #175===================
17-02-28 20:14:19.116 -08 000000044 INF: Y Motor: Unshifted Position: 2842867
17-02-28 20:14:19.166 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.225 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:14:19.225 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:14:19.225 -08 000000058 INF: ===================Camera #0 Frame #180===================
17-02-28 20:14:19.254 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:14:19.254 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:14:19.254 -08 000000081 INF: ===================Camera #2 Frame #181===================
17-02-28 20:14:19.290 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.395 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:14:19.395 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:14:19.395 -08 000000058 INF: ===================Camera #0 Frame #186===================
17-02-28 20:14:19.425 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:14:19.425 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:14:19.425 -08 000000081 INF: ===================Camera #2 Frame #188===================
17-02-28 20:14:19.430 -08 000000044 INF: Y Motor: Unshifted Position: 2639844
17-02-28 20:14:19.480 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.565 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:14:19.565 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:14:19.565 -08 000000058 INF: ===================Camera #0 Frame #193===================
17-02-28 20:14:19.597 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:14:19.597 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:14:19.597 -08 000000081 INF: ===================Camera #2 Frame #194===================
17-02-28 20:14:19.604 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.738 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:14:19.738 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:14:19.738 -08 000000058 INF: ===================Camera #0 Frame #199===================
17-02-28 20:14:19.740 -08 000000044 INF: Y Motor: Unshifted Position: 2436410
17-02-28 20:14:19.768 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:14:19.768 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:14:19.768 -08 000000081 INF: ===================Camera #2 Frame #200===================
17-02-28 20:14:19.790 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.906 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:14:19.906 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:14:19.906 -08 000000058 INF: ===================Camera #0 Frame #205===================
17-02-28 20:14:19.914 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:19.938 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:14:19.938 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:14:19.938 -08 000000081 INF: ===================Camera #2 Frame #206===================
17-02-28 20:14:19.965 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:14:20.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:20.054 -08 000000044 INF: Y Motor: Unshifted Position: 2232737
17-02-28 20:14:20.076 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:14:20.076 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:14:20.076 -08 000000058 INF: ===================Camera #0 Frame #211===================
17-02-28 20:14:20.104 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.109 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:14:20.109 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:14:20.109 -08 000000081 INF: ===================Camera #2 Frame #213===================
17-02-28 20:14:20.153 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:20.226 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:20.245 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:14:20.245 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:14:20.245 -08 000000058 INF: ===================Camera #0 Frame #218===================
17-02-28 20:14:20.283 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:14:20.283 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:14:20.283 -08 000000081 INF: ===================Camera #2 Frame #219===================
17-02-28 20:14:20.366 -08 000000044 INF: Y Motor: Unshifted Position: 2031239
17-02-28 20:14:20.416 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.418 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:14:20.418 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:14:20.418 -08 000000058 INF: ===================Camera #0 Frame #224===================
17-02-28 20:14:20.454 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:14:20.454 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:14:20.454 -08 000000081 INF: ===================Camera #2 Frame #225===================
17-02-28 20:14:20.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:20.540 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.551 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:20.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:14:20.588 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:14:20.588 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:14:20.588 -08 000000058 INF: ===================Camera #0 Frame #230===================
17-02-28 20:14:20.625 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:14:20.625 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:14:20.625 -08 000000081 INF: ===================Camera #2 Frame #232===================
17-02-28 20:14:20.676 -08 000000044 INF: Y Motor: Unshifted Position: 1827564
17-02-28 20:14:20.726 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.757 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:14:20.757 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:14:20.757 -08 000000058 INF: ===================Camera #0 Frame #237===================
17-02-28 20:14:20.799 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:14:20.799 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:14:20.799 -08 000000081 INF: ===================Camera #2 Frame #238===================
17-02-28 20:14:20.852 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:20.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:20.928 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:20.930 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:14:20.930 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:14:20.930 -08 000000058 INF: ===================Camera #0 Frame #243===================
17-02-28 20:14:20.969 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:14:20.969 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:14:20.969 -08 000000081 INF: ===================Camera #2 Frame #244===================
17-02-28 20:14:20.989 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:20.989 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (8)===================
17-02-28 20:14:20.989 -08 000000042 INF: Valve B1: Go to position 8
17-02-28 20:14:20.989 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:20.990 -08 000000044 INF: Y Motor: Unshifted Position: 1623684
17-02-28 20:14:21.040 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 4\r
17-02-28 20:14:21.051 -08 000000042 INF: Valve B1: 22.964 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:14:21.051 -08 000000042 INF: Valve B1: Taking longest path 'CC' from 4 to 8 to avoid 7
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC8\r
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:14:21.051 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:21.100 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:14:21.100 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:14:21.100 -08 000000058 INF: ===================Camera #0 Frame #249===================
17-02-28 20:14:21.139 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:14:21.139 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:14:21.139 -08 000000081 INF: ===================Camera #2 Frame #251===================
17-02-28 20:14:21.164 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.270 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:14:21.270 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:14:21.270 -08 000000058 INF: ===================Camera #0 Frame #255===================
17-02-28 20:14:21.300 -08 000000044 INF: Y Motor: Unshifted Position: 1421742
17-02-28 20:14:21.313 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:14:21.313 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:14:21.313 -08 000000081 INF: ===================Camera #2 Frame #257===================
17-02-28 20:14:21.350 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.438 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:14:21.438 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:14:21.438 -08 000000058 INF: ===================Camera #0 Frame #262===================
17-02-28 20:14:21.474 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.482 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:14:21.482 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:14:21.482 -08 000000081 INF: ===================Camera #2 Frame #263===================
17-02-28 20:14:21.609 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:14:21.609 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:14:21.609 -08 000000058 INF: ===================Camera #0 Frame #268===================
17-02-28 20:14:21.611 -08 000000044 INF: Y Motor: Unshifted Position: 1219589
17-02-28 20:14:21.651 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:14:21.651 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:14:21.651 -08 000000081 INF: ===================Camera #2 Frame #269===================
17-02-28 20:14:21.661 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.736 -08 000000038 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:21.736 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:21.738 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:14:21.738 -08 000000069 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:21.738 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:21.738 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:14:21.739 -08 000000029 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:21.739 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:21.739 -08 000000029 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:21.739 -08 000000029 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:21.739 -08 000000029 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:21.739 -08 000000029 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:21.739 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:21.739 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:21.739 -08 000000030 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:21.740 -08 000000030 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:21.778 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:21.778 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:21.778 -08 000000058 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:21.788 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.791 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:21.792 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:21.924 -08 000000044 INF: Y Motor: Unshifted Position: 1015925
17-02-28 20:14:21.957 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:21.957 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:21.957 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:21.957 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:21.957 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:14:21.967 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:21.968 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:21.974 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:21.991 -08 000000058 INF: ======================================
17-02-28 20:14:22.112 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:14:22.112 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:14:22.112 -08 000000029 INF: Excitation Filter 2: Moved 107 steps in 372.9616 ms
17-02-28 20:14:22.112 -08 000000029 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.0605 ms
17-02-28 20:14:22.112 -08 000000029 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1319 ms
17-02-28 20:14:22.112 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 372.8232 ms
17-02-28 20:14:22.112 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.0643 ms
17-02-28 20:14:22.112 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.203 ms
17-02-28 20:14:22.112 -08 000000029 INF: ======================================
17-02-28 20:14:22.112 -08 000000030 INF: ======================================
17-02-28 20:14:22.114 -08 000000044 INF: Y Motor: Unshifted Position: 982969
17-02-28 20:14:22.114 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:22.114 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:22.114 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:22.115 -08 000000069 INF: ======================================
17-02-28 20:14:22.167 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:22.167 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:22.175 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:22.175 -08 000000044 INF: Y Motor: Moved to 14.8297 after 7862 ms
17-02-28 20:14:22.175 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:22.202 -08 000000081 INF: ======================================
17-02-28 20:14:22.203 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:14:22.204 -08 000000086 INF: ======================================
17-02-28 20:14:22.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:22.234 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:22.234 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:22.238 -08 000000044 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:22.238 -08 000000044 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:22.238 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:22.298 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:22.299 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:22.299 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:22.299 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:22.306 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:22.361 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:22.398 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:22.423 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:22.484 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:14:22.484 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:14:22.485 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:22.485 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:22.485 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:22.547 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:22.547 -08 000000044 INF: ======================================
17-02-28 20:14:22.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:22.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:22.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.550 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:22.584 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:14:22.610 -08 000000053 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:22.610 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:22.672 -08 000000108 INF: FPGA: Recv TDIYERD 1482971
17-02-28 20:14:22.672 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:22.673 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:22.734 -08 000000052 INF: FPGA: Recv ZADCR 31548
17-02-28 20:14:22.734 -08 000000018 INF: At scan end Y pos = 14.830 and Z pos = -0.121. Y moved -48.539 mm
17-02-28 20:14:22.734 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:22.773 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:22.796 -08 000000034 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:22.796 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:22.796 -08 000000018 INF: TDIScan finished after 11835.9549 ms
17-02-28 20:14:22.796 -08 000000018 INF: Image[0]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:14:22.796 -08 000000018 INF: Image[2]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:14:22.798 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.830 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.897 um
17-02-28 20:14:22.831 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.832 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:22.858 -08 000000109 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:22.859 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:22.859 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:22.859 -08 000000047 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:22.859 -08 000000089 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:22.860 -08 000000087 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:22.860 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:22.860 -08 000000087 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:22.860 -08 000000087 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:22.860 -08 000000089 INF: ======================================
17-02-28 20:14:22.860 -08 000000102 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:22.860 -08 000000102 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:22.860 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:22.860 -08 000000055 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:22.861 -08 000000045 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:22.864 -08 000000055 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:22.889 -08 000000055 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:22.890 -08 000000055 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:22.891 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:14:22.891 -08 000000062 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.891 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.891 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.891 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:22.922 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:14:22.922 -08 000000087 INF: ======================================
17-02-28 20:14:22.922 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:22.922 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:14:22.923 -08 000000045 INF: FPGA: Xmit ZDACW 32222\n
17-02-28 20:14:22.923 -08 000000102 INF: ======================================
17-02-28 20:14:22.965 -08 000000062 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.965 -08 000000085 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.965 -08 000000066 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.965 -08 000000034 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:22.982 -08 000000069 INF: FPGA: Recv ZDACW 
17-02-28 20:14:22.983 -08 000000045 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:22.983 -08 000000045 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:23.048 -08 000000108 INF: FPGA: Recv TDIBB
17-02-28 20:14:23.048 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:23.049 -08 000000045 INF: ======================================
17-02-28 20:14:23.109 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:23.116 -08 000000066 INF: LFT found best fwhm score 2.184365 in 151 ms
17-02-28 20:14:23.117 -08 000000066 INF: LFT found good score at index 4709 with fwhm value 2.184365. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000062 INF: LFT found best fwhm score 2.000736 in 152 ms
17-02-28 20:14:23.117 -08 000000085 INF: LFT found best fwhm score 2.000124 in 152 ms
17-02-28 20:14:23.117 -08 000000085 INF: LFT found good score at index 4209 with fwhm value 2.000124. Next cycle, cycle 4 starting Z position for top surface is at -0.125 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000062 INF: LFT found good score at index 4901 with fwhm value 2.000736. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000034 INF: LFT found best fwhm score 2.00011 in 151 ms
17-02-28 20:14:23.117 -08 000000034 INF: LFT found good score at index 8517 with fwhm value 2.00011. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:23.117 -08 000000066 INF: ======================================
17-02-28 20:14:23.117 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:14:23.117 -08 000000062 INF: ======================================
17-02-28 20:14:23.118 -08 000000085 INF: ======================================
17-02-28 20:14:23.118 -08 000000034 INF: ======================================
17-02-28 20:14:23.119 -08 000000055 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:23.120 -08 000000055 INF: LFT weighted average best Z for top surface is at -0.125mm FC:A, C:3,L:4,T
17-02-28 20:14:23.120 -08 000000055 INF: ======================================
17-02-28 20:14:23.121 -08 000000047 INF: ======================================
17-02-28 20:14:23.122 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:23.123 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:23.124 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:23.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:23.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 13.87993 Y = 39.70011===================
17-02-28 20:14:23.126 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Waiting for image analysis===================
17-02-28 20:14:23.126 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:23.148 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:14:23.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:23.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:23.149 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:23.149 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:23.150 -08 000000018 INF: Transformed XStagePosition from 14.98793 mm to 15.0013852976263 mm.
17-02-28 20:14:23.161 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4790763327628 mm.
17-02-28 20:14:23.161 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2790763327628 mm.
17-02-28 20:14:23.161 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3698263327628 mm.
17-02-28 20:14:23.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:23.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:23.164 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -122.9 um, section = D_1
17-02-28 20:14:23.189 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":4,"Tile":1101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF280","HCSMMF241","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.191 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:23.191 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:23.194 -08 000000085 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:23.194 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:14:23.194 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:23.194 -08 000000047 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:23.195 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:23.195 -08 000000104 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:23.195 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:23.196 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:23.198 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:23.198 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.198 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:23.199 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:14:23.199 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:23.199 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:23.199 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.199 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:23.200 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:14:23.200 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:23.200 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:23.200 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:23.201 -08 000000102 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:23.201 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:23.201 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:23.201 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:23.204 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:23.204 -08 000000044 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:23.204 -08 000000044 INF: Y Motor: Moving to 64.4791 mm @25.000 mm/sec, started at 14.8297 mm
17-02-28 20:14:23.205 -08 000000044 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:23.205 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:23.207 -08 000000106 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:23.207 -08 000000106 INF: ======================================
17-02-28 20:14:23.210 -08 000000106 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:23.210 -08 000000106 INF: ======================================
17-02-28 20:14:23.212 -08 000000106 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:23.213 -08 000000106 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:23.218 -08 000000055 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:23.218 -08 000000057 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:23.218 -08 000000055 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:23.218 -08 000000032 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:23.218 -08 000000057 INF: ======================================
17-02-28 20:14:23.219 -08 000000055 INF: ======================================
17-02-28 20:14:23.219 -08 000000032 INF: ======================================
17-02-28 20:14:23.221 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:23.223 -08 000000052 INF: ======================================
17-02-28 20:14:23.226 -08 000000034 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:23.227 -08 000000034 INF: ======================================
17-02-28 20:14:23.230 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:23.230 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":4,"Tile":1105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF240","HCSMMF262","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.231 -08 000000089 INF: ======================================
17-02-28 20:14:23.232 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:23.233 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:23.233 -08 000000089 INF: ======================================
17-02-28 20:14:23.233 -08 000000030 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:23.233 -08 000000058 INF: ======================================
17-02-28 20:14:23.234 -08 000000030 INF: ======================================
17-02-28 20:14:23.234 -08 000000089 INF: FPGA: Recv ZSEL 
17-02-28 20:14:23.236 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:23.237 -08 000000102 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:23.237 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:23.237 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:23.245 -08 000000106 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:23.248 -08 000000106 INF: ======================================
17-02-28 20:14:23.250 -08 000000085 INF: ======================================
17-02-28 20:14:23.295 -08 000000089 INF: FPGA: Recv TDIBB
17-02-28 20:14:23.296 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Moving to 15.0014 mm @15.000 mm/sec, started at 13.9023 mm
17-02-28 20:14:23.297 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.297 -08 000000066 INF: X Motor: Xmit MA -18022\n
17-02-28 20:14:23.297 -08 000000044 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:23.297 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:23.297 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:23.297 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.299 -08 000000102 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:23.299 -08 000000102 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:23.299 -08 000000102 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:23.304 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:14:23.350 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":4,"Tile":1102,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF200","HCSMMF252","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.352 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":4,"Tile":1106,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF239","HCSMMF231","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.353 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":4,"Tile":1108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF178","HCSMMF251","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.354 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":4,"Tile":1103,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF222","HCSMMF220","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.355 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":4,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF265","HCSMMF273","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.356 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":4,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF281","HCSMMF180","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.357 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:23.358 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:23.358 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.359 -08 000000066 INF: X Motor: Recv MA -18022\r\n>
17-02-28 20:14:23.359 -08 000000066 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:14:23.361 -08 000000102 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:23.361 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.362 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":4,"Tile":1109,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF270","HCSMMF225","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.363 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.363 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:23.364 -08 000000102 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:23.364 -08 000000102 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:23.364 -08 000000102 INF: Z Motor: Arming to move to -0.0829 mm
17-02-28 20:14:23.364 -08 000000102 INF: FPGA: Xmit ZYT 6427908 4\n
17-02-28 20:14:23.364 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":4,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF266","HCSMMF237","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.365 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":4,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF199","HCSMMF254","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.366 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":4,"Tile":1104,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF212","HCSMMF195","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.367 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":4,"Tile":1111,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF193","HCSMMF235","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.367 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":4,"Tile":1115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF253","HCSMMF214","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.368 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":4,"Tile":1112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF245","HCSMMF283","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.369 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":4,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF279","HCSMMF221","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.370 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":4,"Tile":1116,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF185","HCSMMF217","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.371 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":4,"Tile":1117,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF182","HCSMMF219","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.371 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":4,"Tile":1119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF204","HCSMMF191","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.372 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":4,"Tile":1120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF272","HCSMMF196","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.373 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":4,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF177","HCSMMF249","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.373 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":4,"Tile":1122,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF208","HCSMMF228","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.375 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":4,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF230","HCSMMF216","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.376 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":4,"Tile":1123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF194","HCSMMF229","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.377 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":4,"Tile":1126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF190","HCSMMF207","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.378 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":4,"Tile":1127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF176","HCSMMF285","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.379 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":4,"Tile":1125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF246","HCSMMF243","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.380 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":4,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF287","HCSMMF267","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:23.382 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.388 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:23.420 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:14:23.420 -08 000000102 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482969 enc / 14.830 mm / ) = 6427908 enc / 64.279 mm
17-02-28 20:14:23.420 -08 000000102 INF: FPGA: Xmit ZARM 21736\n
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Set target position to 5947908 encoder counts
17-02-28 20:14:23.421 -08 000000044 INF: Y Motor: Xmit s r0xca 5947908\r
17-02-28 20:14:23.458 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:23.481 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:14:23.481 -08 000000102 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.1049 ms
17-02-28 20:14:23.481 -08 000000102 INF: Z Motor: ArmAbsStepped took 117.1224 ms
17-02-28 20:14:23.481 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:23.483 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.483 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.483 -08 000000044 INF: Y Motor: Start the move command
17-02-28 20:14:23.483 -08 000000044 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:23.484 -08 000000102 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:23.485 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.486 -08 000000102 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:23.486 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:14:23.488 -08 000000102 INF: ======================================
17-02-28 20:14:23.488 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.488 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:23.525 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.530 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:23.547 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:23.547 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:14:23.548 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:23.548 -08 000000044 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:23.548 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:23.615 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.621 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:23.647 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP7680R\r
17-02-28 20:14:23.674 -08 000000044 INF: Y Motor: Unshifted Position: 1067054
17-02-28 20:14:23.724 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:23.733 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:23.753 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.759 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:23.811 -08 000000050 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:23.811 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:23.811 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:23.828 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:23.829 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:23.833 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:23.847 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:23.869 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:23.921 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:23.984 -08 000000044 INF: Y Motor: Unshifted Position: 1777139
17-02-28 20:14:23.984 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:24.034 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.046 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:24.046 -08 000000066 INF: X Motor: Moved to 15.0010 after 687 ms
17-02-28 20:14:24.046 -08 000000066 INF: ======================================
17-02-28 20:14:24.160 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.164 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:24.171 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:24.233 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:24.300 -08 000000044 INF: Y Motor: Unshifted Position: 2552985
17-02-28 20:14:24.350 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.423 -08 000000050 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:24.423 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:24.423 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:24.439 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:24.441 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:14:24.442 -08 000000050 INF: ======================================
17-02-28 20:14:24.444 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:24.445 -08 000000104 INF: ======================================
17-02-28 20:14:24.471 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.483 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:24.543 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:24.610 -08 000000044 INF: Y Motor: Unshifted Position: 3332932
17-02-28 20:14:24.660 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.781 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:24.793 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:24.858 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:24.923 -08 000000044 INF: Y Motor: Unshifted Position: 4118842
17-02-28 20:14:24.973 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.095 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.108 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:25.169 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:25.233 -08 000000044 INF: Y Motor: Unshifted Position: 4899616
17-02-28 20:14:25.283 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.405 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.419 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:25.480 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:25.545 -08 000000044 INF: Y Motor: Unshifted Position: 5675526
17-02-28 20:14:25.595 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.719 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:25.730 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:25.792 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:25.854 -08 000000044 INF: Y Motor: Unshifted Position: 5947910
17-02-28 20:14:25.854 -08 000000044 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:25.854 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:25.919 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:25.919 -08 000000044 INF: Y Motor: Moved to 64.4791 after 2371 ms
17-02-28 20:14:25.919 -08 000000044 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:25.980 -08 000000044 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:25.980 -08 000000044 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:25.980 -08 000000044 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:26.042 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:26.042 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:26.042 -08 000000044 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:26.042 -08 000000044 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:26.105 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:26.106 -08 000000044 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: Recv v 0\r
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:26.168 -08 000000044 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:26.232 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:26.232 -08 000000044 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:26.232 -08 000000044 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:26.294 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:26.294 -08 000000044 INF: ======================================
17-02-28 20:14:26.295 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:14:26.296 -08 000000047 INF: ======================================
17-02-28 20:14:26.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:26.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:26.298 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:14:26.298 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:14:26.356 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:26.357 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:26.357 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:14:26.388 -08 000000032 INF: RunCopyService queue size at 2/28/2017 8:14:26 PM is 2
17-02-28 20:14:26.418 -08 000000100 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:26.419 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:26.419 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:26.419 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:26.419 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:26.527 -08 000000055 INF: FPGA: Recv TDIYERD 6447910
17-02-28 20:14:26.527 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447910 counts (64.479 mm)
17-02-28 20:14:26.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:26.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:26.530 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:26.530 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:26.531 -08 000000047 INF: ======================================
17-02-28 20:14:26.531 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:26.532 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:26.532 -08 000000053 INF: FPGA: Xmit TDIYPOS 6336983\n
17-02-28 20:14:26.589 -08 000000038 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:26.590 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:26.591 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:26.592 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6427908 1 1\n
17-02-28 20:14:26.649 -08 000000095 INF: FPGA: Recv TDIYARM3
17-02-28 20:14:26.650 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:26.651 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:26.653 -08 000000053 INF: ======================================
17-02-28 20:14:26.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:26.656 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:26.656 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:26.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:26.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:26.659 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:26.659 -08 000000044 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:26.659 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:26.659 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:26.659 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:26.659 -08 000000044 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:26.659 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:26.659 -08 000000044 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:26.659 -08 000000044 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:26.660 -08 000000044 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:26.669 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:26.712 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:26.962 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.025 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:27.025 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:14:27.025 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:14:27.025 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 366.2072 ms
17-02-28 20:14:27.025 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.3593 ms
17-02-28 20:14:27.025 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.4744 ms
17-02-28 20:14:27.026 -08 000000044 INF: Excitation Filter 1: Moved -107 steps in 366.0316 ms
17-02-28 20:14:27.026 -08 000000044 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.647 ms
17-02-28 20:14:27.026 -08 000000044 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.7736 ms
17-02-28 20:14:27.026 -08 000000050 INF: ======================================
17-02-28 20:14:27.026 -08 000000044 INF: ======================================
17-02-28 20:14:27.028 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:27.030 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:27.031 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:27.031 -08 000000038 INF: ===================FPGA Z Wait===================
17-02-28 20:14:27.031 -08 000000076 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:27.031 -08 000000076 INF: Y Motor: Moving to 14.8307 mm @6.500 mm/sec, started at 64.4791 mm
17-02-28 20:14:27.031 -08 000000076 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:27.032 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:27.032 -08 000000109 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:27.032 -08 000000109 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:27.033 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:27.034 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:14:27.035 -08 000000053 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:27.036 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:14:27.037 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:27.039 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.039 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.039 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.039 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.091 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.091 -08 000000076 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:27.091 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:27.152 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.152 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:27.189 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.189 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.190 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.190 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Set target position to 983074 encoder counts
17-02-28 20:14:27.215 -08 000000076 INF: Y Motor: Xmit s r0xca 983074\r
17-02-28 20:14:27.275 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.275 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.275 -08 000000076 INF: Y Motor: Start the move command
17-02-28 20:14:27.275 -08 000000076 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:27.339 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:27.339 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.339 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.340 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:27.340 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:27.340 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:27.340 -08 000000076 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:14:27.340 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.400 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:27.401 -08 000000038 INF: ======================================
17-02-28 20:14:27.464 -08 000000076 INF: Y Motor: Unshifted Position: 5884320
17-02-28 20:14:27.489 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:27.489 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:27.489 -08 000000030 INF: ===================Camera #0 Frame #5===================
17-02-28 20:14:27.490 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:27.490 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:27.490 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:27.514 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.589 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.638 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.649 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:27.661 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:27.661 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:27.661 -08 000000030 INF: ===================Camera #0 Frame #11===================
17-02-28 20:14:27.663 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:27.663 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:27.663 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:14:27.776 -08 000000076 INF: Y Motor: Unshifted Position: 5682822
17-02-28 20:14:27.826 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.837 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:14:27.837 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:14:27.837 -08 000000030 INF: ===================Camera #0 Frame #18===================
17-02-28 20:14:27.841 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:14:27.841 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:14:27.841 -08 000000081 INF: ===================Camera #2 Frame #18===================
17-02-28 20:14:27.899 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:27.950 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:27.960 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.017 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:14:28.017 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:14:28.017 -08 000000030 INF: ===================Camera #0 Frame #24===================
17-02-28 20:14:28.022 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:14:28.022 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:14:28.022 -08 000000081 INF: ===================Camera #2 Frame #24===================
17-02-28 20:14:28.088 -08 000000076 INF: Y Motor: Unshifted Position: 5478515
17-02-28 20:14:28.138 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.186 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:14:28.186 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:14:28.186 -08 000000030 INF: ===================Camera #0 Frame #31===================
17-02-28 20:14:28.191 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:14:28.191 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:14:28.191 -08 000000081 INF: ===================Camera #2 Frame #31===================
17-02-28 20:14:28.210 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:28.263 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.272 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.362 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:14:28.362 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:14:28.362 -08 000000030 INF: ===================Camera #0 Frame #37===================
17-02-28 20:14:28.370 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:14:28.370 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:14:28.370 -08 000000081 INF: ===================Camera #2 Frame #37===================
17-02-28 20:14:28.400 -08 000000076 INF: Y Motor: Unshifted Position: 5275489
17-02-28 20:14:28.450 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.522 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:28.538 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:14:28.538 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:14:28.538 -08 000000030 INF: ===================Camera #0 Frame #43===================
17-02-28 20:14:28.549 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:14:28.549 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:14:28.549 -08 000000081 INF: ===================Camera #2 Frame #44===================
17-02-28 20:14:28.574 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.585 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.712 -08 000000076 INF: Y Motor: Unshifted Position: 5072692
17-02-28 20:14:28.715 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:14:28.715 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:14:28.715 -08 000000030 INF: ===================Camera #0 Frame #50===================
17-02-28 20:14:28.733 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:14:28.733 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:14:28.733 -08 000000081 INF: ===================Camera #2 Frame #51===================
17-02-28 20:14:28.762 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.835 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:28.887 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:28.893 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:14:28.893 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:14:28.893 -08 000000030 INF: ===================Camera #0 Frame #57===================
17-02-28 20:14:28.898 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:28.911 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:14:28.911 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:14:28.911 -08 000000081 INF: ===================Camera #2 Frame #57===================
17-02-28 20:14:29.024 -08 000000076 INF: Y Motor: Unshifted Position: 4870329
17-02-28 20:14:29.068 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:14:29.068 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:14:29.068 -08 000000030 INF: ===================Camera #0 Frame #63===================
17-02-28 20:14:29.074 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.089 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:14:29.089 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:14:29.089 -08 000000081 INF: ===================Camera #2 Frame #64===================
17-02-28 20:14:29.148 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:29.197 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.208 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:29.244 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:14:29.244 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:14:29.244 -08 000000030 INF: ===================Camera #0 Frame #69===================
17-02-28 20:14:29.272 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:14:29.272 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:14:29.272 -08 000000081 INF: ===================Camera #2 Frame #70===================
17-02-28 20:14:29.336 -08 000000076 INF: Y Motor: Unshifted Position: 4666874
17-02-28 20:14:29.386 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.421 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:14:29.421 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:14:29.421 -08 000000030 INF: ===================Camera #0 Frame #76===================
17-02-28 20:14:29.445 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:14:29.445 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:14:29.445 -08 000000081 INF: ===================Camera #2 Frame #77===================
17-02-28 20:14:29.458 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:29.511 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.521 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:29.521 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:29.521 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:29.522 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:14:29.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:14:29.592 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:14:29.592 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:14:29.592 -08 000000030 INF: ===================Camera #0 Frame #82===================
17-02-28 20:14:29.617 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:14:29.617 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:14:29.617 -08 000000081 INF: ===================Camera #2 Frame #83===================
17-02-28 20:14:29.646 -08 000000076 INF: Y Motor: Unshifted Position: 4465357
17-02-28 20:14:29.696 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.761 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:14:29.761 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:14:29.761 -08 000000030 INF: ===================Camera #0 Frame #88===================
17-02-28 20:14:29.786 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:14:29.786 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:14:29.786 -08 000000081 INF: ===================Camera #2 Frame #89===================
17-02-28 20:14:29.823 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:29.929 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:14:29.929 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:14:29.929 -08 000000030 INF: ===================Camera #0 Frame #95===================
17-02-28 20:14:29.955 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:14:29.955 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:14:29.955 -08 000000081 INF: ===================Camera #2 Frame #96===================
17-02-28 20:14:29.959 -08 000000076 INF: Y Motor: Unshifted Position: 4260405
17-02-28 20:14:30.009 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.102 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:14:30.102 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:14:30.102 -08 000000030 INF: ===================Camera #0 Frame #101===================
17-02-28 20:14:30.129 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:14:30.129 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:14:30.129 -08 000000081 INF: ===================Camera #2 Frame #102===================
17-02-28 20:14:30.133 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.271 -08 000000076 INF: Y Motor: Unshifted Position: 4058022
17-02-28 20:14:30.271 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:14:30.271 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:14:30.271 -08 000000030 INF: ===================Camera #0 Frame #107===================
17-02-28 20:14:30.300 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:14:30.300 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:14:30.300 -08 000000081 INF: ===================Camera #2 Frame #108===================
17-02-28 20:14:30.321 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.440 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:14:30.440 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:14:30.440 -08 000000030 INF: ===================Camera #0 Frame #113===================
17-02-28 20:14:30.445 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.469 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:14:30.469 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:14:30.469 -08 000000081 INF: ===================Camera #2 Frame #115===================
17-02-28 20:14:30.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:30.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:14:30.584 -08 000000076 INF: Y Motor: Unshifted Position: 3855226
17-02-28 20:14:30.608 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:14:30.608 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:14:30.608 -08 000000030 INF: ===================Camera #0 Frame #120===================
17-02-28 20:14:30.634 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.641 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:14:30.641 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:14:30.641 -08 000000081 INF: ===================Camera #2 Frame #121===================
17-02-28 20:14:30.760 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.780 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:14:30.780 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:14:30.780 -08 000000030 INF: ===================Camera #0 Frame #126===================
17-02-28 20:14:30.811 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:14:30.811 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:14:30.811 -08 000000081 INF: ===================Camera #2 Frame #127===================
17-02-28 20:14:30.894 -08 000000076 INF: Y Motor: Unshifted Position: 3653507
17-02-28 20:14:30.944 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:30.948 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:14:30.948 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:14:30.948 -08 000000030 INF: ===================Camera #0 Frame #132===================
17-02-28 20:14:30.980 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:14:30.980 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:14:30.980 -08 000000081 INF: ===================Camera #2 Frame #133===================
17-02-28 20:14:31.071 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.116 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:14:31.116 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:14:31.116 -08 000000030 INF: ===================Camera #0 Frame #138===================
17-02-28 20:14:31.149 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:14:31.149 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:14:31.149 -08 000000081 INF: ===================Camera #2 Frame #140===================
17-02-28 20:14:31.209 -08 000000076 INF: Y Motor: Unshifted Position: 3450051
17-02-28 20:14:31.259 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.284 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:14:31.284 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:14:31.284 -08 000000030 INF: ===================Camera #0 Frame #145===================
17-02-28 20:14:31.322 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:14:31.322 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:14:31.322 -08 000000081 INF: ===================Camera #2 Frame #146===================
17-02-28 20:14:31.381 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.455 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:14:31.455 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:14:31.455 -08 000000030 INF: ===================Camera #0 Frame #151===================
17-02-28 20:14:31.491 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:14:31.491 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:14:31.491 -08 000000081 INF: ===================Camera #2 Frame #152===================
17-02-28 20:14:31.520 -08 000000076 INF: Y Motor: Unshifted Position: 3246608
17-02-28 20:14:31.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:31.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:14:31.570 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.623 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:14:31.623 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:14:31.623 -08 000000030 INF: ===================Camera #0 Frame #157===================
17-02-28 20:14:31.660 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:14:31.660 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:14:31.660 -08 000000081 INF: ===================Camera #2 Frame #158===================
17-02-28 20:14:31.694 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.791 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:14:31.791 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:14:31.791 -08 000000030 INF: ===================Camera #0 Frame #163===================
17-02-28 20:14:31.829 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:14:31.829 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:14:31.829 -08 000000081 INF: ===================Camera #2 Frame #165===================
17-02-28 20:14:31.830 -08 000000076 INF: Y Motor: Unshifted Position: 3044901
17-02-28 20:14:31.880 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:31.960 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:14:31.960 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:14:31.960 -08 000000030 INF: ===================Camera #0 Frame #169===================
17-02-28 20:14:32.001 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:14:32.001 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:14:32.001 -08 000000081 INF: ===================Camera #2 Frame #171===================
17-02-28 20:14:32.007 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.128 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:14:32.128 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:14:32.128 -08 000000030 INF: ===================Camera #0 Frame #176===================
17-02-28 20:14:32.143 -08 000000076 INF: Y Motor: Unshifted Position: 2841237
17-02-28 20:14:32.170 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:14:32.170 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:14:32.170 -08 000000081 INF: ===================Camera #2 Frame #177===================
17-02-28 20:14:32.193 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.299 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:14:32.299 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:14:32.299 -08 000000030 INF: ===================Camera #0 Frame #182===================
17-02-28 20:14:32.319 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.339 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:14:32.339 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:14:32.339 -08 000000081 INF: ===================Camera #2 Frame #183===================
17-02-28 20:14:32.456 -08 000000076 INF: Y Motor: Unshifted Position: 2637565
17-02-28 20:14:32.467 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:14:32.467 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:14:32.467 -08 000000030 INF: ===================Camera #0 Frame #188===================
17-02-28 20:14:32.506 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.508 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:14:32.508 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:14:32.508 -08 000000081 INF: ===================Camera #2 Frame #190===================
17-02-28 20:14:32.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:32.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:14:32.630 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.635 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:14:32.635 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:14:32.635 -08 000000030 INF: ===================Camera #0 Frame #194===================
17-02-28 20:14:32.680 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:14:32.680 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:14:32.680 -08 000000081 INF: ===================Camera #2 Frame #196===================
17-02-28 20:14:32.766 -08 000000076 INF: Y Motor: Unshifted Position: 2436078
17-02-28 20:14:32.803 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:14:32.803 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:14:32.803 -08 000000030 INF: ===================Camera #0 Frame #200===================
17-02-28 20:14:32.816 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.849 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:14:32.849 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:14:32.849 -08 000000081 INF: ===================Camera #2 Frame #202===================
17-02-28 20:14:32.943 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:32.971 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:14:32.971 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:14:32.971 -08 000000030 INF: ===================Camera #0 Frame #207===================
17-02-28 20:14:33.018 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:14:33.018 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:14:33.018 -08 000000081 INF: ===================Camera #2 Frame #208===================
17-02-28 20:14:33.079 -08 000000076 INF: Y Motor: Unshifted Position: 2232624
17-02-28 20:14:33.129 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.142 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:14:33.142 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:14:33.142 -08 000000030 INF: ===================Camera #0 Frame #213===================
17-02-28 20:14:33.187 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:14:33.187 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:14:33.187 -08 000000081 INF: ===================Camera #2 Frame #215===================
17-02-28 20:14:33.253 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.310 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:14:33.310 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:14:33.310 -08 000000030 INF: ===================Camera #0 Frame #219===================
17-02-28 20:14:33.359 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:14:33.359 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:14:33.359 -08 000000081 INF: ===================Camera #2 Frame #221===================
17-02-28 20:14:33.392 -08 000000076 INF: Y Motor: Unshifted Position: 2031121
17-02-28 20:14:33.442 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.478 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:14:33.478 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:14:33.478 -08 000000030 INF: ===================Camera #0 Frame #225===================
17-02-28 20:14:33.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:33.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:14:33.528 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:14:33.528 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:14:33.528 -08 000000081 INF: ===================Camera #2 Frame #227===================
17-02-28 20:14:33.566 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.646 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:14:33.646 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:14:33.646 -08 000000030 INF: ===================Camera #0 Frame #232===================
17-02-28 20:14:33.697 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:14:33.697 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:14:33.697 -08 000000081 INF: ===================Camera #2 Frame #233===================
17-02-28 20:14:33.702 -08 000000076 INF: Y Motor: Unshifted Position: 1827449
17-02-28 20:14:33.752 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.817 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:14:33.817 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:14:33.817 -08 000000030 INF: ===================Camera #0 Frame #238===================
17-02-28 20:14:33.866 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:14:33.866 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:14:33.866 -08 000000081 INF: ===================Camera #2 Frame #240===================
17-02-28 20:14:33.879 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:33.985 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:14:33.985 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:14:33.985 -08 000000030 INF: ===================Camera #0 Frame #244===================
17-02-28 20:14:34.015 -08 000000076 INF: Y Motor: Unshifted Position: 1623790
17-02-28 20:14:34.038 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:14:34.038 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:14:34.038 -08 000000081 INF: ===================Camera #2 Frame #246===================
17-02-28 20:14:34.065 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.153 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:14:34.153 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:14:34.153 -08 000000030 INF: ===================Camera #0 Frame #250===================
17-02-28 20:14:34.189 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.207 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:14:34.207 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:14:34.207 -08 000000081 INF: ===================Camera #2 Frame #252===================
17-02-28 20:14:34.321 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:14:34.321 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:14:34.321 -08 000000030 INF: ===================Camera #0 Frame #256===================
17-02-28 20:14:34.326 -08 000000076 INF: Y Motor: Unshifted Position: 1422287
17-02-28 20:14:34.376 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.376 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:14:34.376 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:14:34.376 -08 000000081 INF: ===================Camera #2 Frame #258===================
17-02-28 20:14:34.489 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:14:34.489 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:14:34.489 -08 000000030 INF: ===================Camera #0 Frame #263===================
17-02-28 20:14:34.503 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:34.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:34.522 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:14:34.522 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:34.545 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:14:34.545 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:14:34.545 -08 000000081 INF: ===================Camera #2 Frame #265===================
17-02-28 20:14:34.621 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:34.639 -08 000000076 INF: Y Motor: Unshifted Position: 1217961
17-02-28 20:14:34.662 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:14:34.662 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:14:34.662 -08 000000030 INF: ===================Camera #0 Frame #269===================
17-02-28 20:14:34.689 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:14:34.700 -08 000000042 INF: Current Position of Pump is: 7680
17-02-28 20:14:34.719 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:14:34.719 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:14:34.719 -08 000000081 INF: ===================Camera #2 Frame #271===================
17-02-28 20:14:34.763 -08 000000085 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:34.765 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:34.766 -08 000000109 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:34.767 -08 000000037 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:34.767 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:34.767 -08 000000037 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:34.767 -08 000000037 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:34.767 -08 000000037 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:34.767 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:34.767 -08 000000037 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:34.768 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:34.768 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:34.769 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:34.800 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:34.814 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:34.832 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:34.832 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:34.832 -08 000000030 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:34.842 -08 000000030 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:34.843 -08 000000030 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:34.886 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:14:34.886 -08 000000042 INF: Current Position of Pump is: 7680
17-02-28 20:14:34.886 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:14:34.953 -08 000000076 INF: Y Motor: Unshifted Position: 1016462
17-02-28 20:14:34.978 -08 000000030 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:34.978 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:34.978 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:34.978 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:34.978 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:14:34.982 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:34.983 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:34.986 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD7680R\r
17-02-28 20:14:35.003 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:35.009 -08 000000030 INF: ======================================
17-02-28 20:14:35.076 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.138 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:14:35.138 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:14:35.138 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 370.0967 ms
17-02-28 20:14:35.138 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.232 ms
17-02-28 20:14:35.138 -08 000000037 INF: Excitation Filter 1: Moved 107 steps in 370.3335 ms
17-02-28 20:14:35.138 -08 000000037 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4624 ms
17-02-28 20:14:35.138 -08 000000037 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.5673 ms
17-02-28 20:14:35.138 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.305 ms
17-02-28 20:14:35.138 -08 000000037 INF: ======================================
17-02-28 20:14:35.138 -08 000000010 INF: ======================================
17-02-28 20:14:35.139 -08 000000076 INF: Y Motor: Unshifted Position: 983073
17-02-28 20:14:35.139 -08 000000076 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:35.139 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:35.140 -08 000000109 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:35.141 -08 000000109 INF: ======================================
17-02-28 20:14:35.153 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:35.153 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:35.176 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:35.188 -08 000000081 INF: ======================================
17-02-28 20:14:35.189 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:14:35.191 -08 000000053 INF: ======================================
17-02-28 20:14:35.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.201 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:35.201 -08 000000076 INF: Y Motor: Moved to 14.8307 after 7861 ms
17-02-28 20:14:35.201 -08 000000076 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:35.264 -08 000000076 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:35.264 -08 000000076 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:35.264 -08 000000076 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:35.325 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:35.325 -08 000000076 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:35.325 -08 000000076 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:35.387 -08 000000076 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: Recv v 0\r
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:35.449 -08 000000076 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:35.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:35.512 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.513 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:35.513 -08 000000076 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:35.513 -08 000000076 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:35.577 -08 000000076 INF: Y Motor: Recv ok\r
17-02-28 20:14:35.577 -08 000000076 INF: ======================================
17-02-28 20:14:35.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:35.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:35.580 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.580 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:35.634 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:35.634 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:35.699 -08 000000069 INF: FPGA: Recv TDIYERD 1483075
17-02-28 20:14:35.699 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:35.761 -08 000000081 INF: FPGA: Recv ZADCR 31896
17-02-28 20:14:35.761 -08 000000018 INF: At scan end Y pos = 14.831 and Z pos = -0.122. Y moved -48.539 mm
17-02-28 20:14:35.761 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:35.762 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:35.823 -08 000000076 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:35.823 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:35.823 -08 000000018 INF: TDIScan finished after 12672.918 ms
17-02-28 20:14:35.823 -08 000000018 INF: Image[0]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:14:35.823 -08 000000018 INF: Image[2]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:14:35.824 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:35.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.860 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.871 um
17-02-28 20:14:35.860 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.861 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:35.885 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:35.885 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:35.886 -08 000000090 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:35.886 -08 000000057 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:35.886 -08 000000108 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:35.886 -08 000000055 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:35.886 -08 000000108 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:35.886 -08 000000108 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:35.887 -08 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:35.887 -08 000000055 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:35.887 -08 000000057 INF: ======================================
17-02-28 20:14:35.887 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:35.887 -08 000000034 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:35.888 -08 000000069 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:35.890 -08 000000034 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:35.916 -08 000000034 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:35.916 -08 000000034 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:35.917 -08 000000029 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.917 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.917 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.918 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:14:35.918 -08 000000029 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.918 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.918 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.918 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:35.947 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:35.947 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:14:35.947 -08 000000069 INF: FPGA: Xmit ZDACW 32222\n
17-02-28 20:14:35.947 -08 000000055 INF: ======================================
17-02-28 20:14:35.949 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:14:35.949 -08 000000108 INF: ======================================
17-02-28 20:14:35.992 -08 000000029 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:35.992 -08 000000076 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:35.992 -08 000000109 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:35.992 -08 000000052 INF: FC:A, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:36.009 -08 000000051 INF: FPGA: Recv ZDACW 
17-02-28 20:14:36.009 -08 000000069 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:36.010 -08 000000069 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:36.071 -08 000000102 INF: FPGA: Recv TDIBB
17-02-28 20:14:36.071 -08 000000069 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:36.072 -08 000000069 INF: ======================================
17-02-28 20:14:36.074 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:36.134 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:36.143 -08 000000029 INF: LFT found best fwhm score 2.00048 in 151 ms
17-02-28 20:14:36.143 -08 000000052 INF: LFT found best fwhm score 2.178101 in 151 ms
17-02-28 20:14:36.143 -08 000000052 INF: LFT found good score at index 6733 with fwhm value 2.178101. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.143 -08 000000109 INF: LFT found best fwhm score 2.000187 in 151 ms
17-02-28 20:14:36.143 -08 000000109 INF: LFT found good score at index 7589 with fwhm value 2.000187. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.143 -08 000000076 INF: LFT found best fwhm score 2.000625 in 151 ms
17-02-28 20:14:36.143 -08 000000076 INF: LFT found good score at index 4013 with fwhm value 2.000625. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.144 -08 000000029 INF: LFT found good score at index 6921 with fwhm value 2.00048. Next cycle, cycle 4 starting Z position for top surface is at -0.126 mm FC:A, C:3,L:4,T
17-02-28 20:14:36.144 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000029 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:14:36.144 -08 000000109 INF: ======================================
17-02-28 20:14:36.144 -08 000000029 INF: ======================================
17-02-28 20:14:36.144 -08 000000052 INF: ======================================
17-02-28 20:14:36.144 -08 000000076 INF: ======================================
17-02-28 20:14:36.145 -08 000000034 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:36.146 -08 000000034 INF: LFT weighted average best Z for top surface is at -0.126mm FC:A, C:3,L:4,T
17-02-28 20:14:36.146 -08 000000034 INF: ======================================
17-02-28 20:14:36.148 -08 000000090 INF: ======================================
17-02-28 20:14:36.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:36.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:36.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:36.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 14.98793 Y = 39.70011===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC, Waiting for image analysis===================
17-02-28 20:14:36.152 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:14:36.175 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:14:36.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:36.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:36.175 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.176 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:36.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:14:36.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:14:36.193 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.219 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":4,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF246","HCSMMF267","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.277 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:36.277 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:36.327 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:36.327 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.328 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:14:36.328 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:14:36.394 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:36.395 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":4,"Tile":1201,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF287","HCSMMF243","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.396 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":4,"Tile":1204,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF258","HCSMMF207","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.400 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":4,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF229","HCSMMF211","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.404 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":4,"Tile":1205,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF190","HCSMMF215","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.407 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":4,"Tile":1209,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF214","HCSMMF275","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.409 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":4,"Tile":1207,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF212","HCSMMF202","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.412 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":4,"Tile":1203,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF257","HCSMMF236","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.415 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":4,"Tile":1206,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF277","HCSMMF248","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.417 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":4,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF195","HCSMMF273","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.419 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":4,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF274","HCSMMF191","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.420 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":4,"Tile":1208,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF231","HCSMMF278","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.421 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":4,"Tile":1212,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF265","HCSMMF232","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.423 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":4,"Tile":1211,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF182","HCSMMF219","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.423 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":4,"Tile":1217,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF244","HCSMMF192","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.424 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":4,"Tile":1218,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF252","HCSMMF217","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.425 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":4,"Tile":1216,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF245","HCSMMF284","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.426 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":4,"Tile":1223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF269","HCSMMF262","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.427 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":4,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF283","HCSMMF199","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.428 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":4,"Tile":1222,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF220","HCSMMF251","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.429 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":4,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF254","HCSMMF206","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.430 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":4,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF184","HCSMMF221","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.431 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":4,"Tile":1220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF185","HCSMMF222","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.433 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":4,"Tile":1225,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF256","HCSMMF234","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.437 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":4,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF249","HCSMMF286","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.438 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":4,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF178","HCSMMF233","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.442 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":4,"Tile":1224,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF188","HCSMMF280","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.443 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":4,"Tile":1228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF213","HCSMMF241","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:36.446 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.449 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:36.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (8)===================
17-02-28 20:14:36.449 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:14:36.452 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:36.545 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.545 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:36.583 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.588 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:36.672 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.678 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:36.698 -08 000000047 INF: FPGA: Recv MIOCOMPR
17-02-28 20:14:36.698 -08 000000018 INF: Compensator: Moved OutOfPath in 370 ms
17-02-28 20:14:36.698 -08 000000018 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:36.699 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.699 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.700 -08 000000030 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:36.700 -08 000000101 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:36.700 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:36.701 -08 000000030 INF: ======================================
17-02-28 20:14:36.701 -08 000000101 INF: ======================================
17-02-28 20:14:36.701 -08 000000109 INF: ======================================
17-02-28 20:14:36.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:36.709 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:14:36.717 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:14:36.717 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:36.717 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:14:36.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:36.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:36.721 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:14:36.721 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:14:36.722 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:14:36.760 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:36.760 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:36.761 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:36.761 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1229 mm
17-02-28 20:14:36.761 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:36.777 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:36.783 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:36.825 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:14:36.825 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:36.884 -08 000000095 INF: FPGA: Recv ZYT 
17-02-28 20:14:36.884 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:36.884 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:14:36.947 -08 000000032 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:36.947 -08 000000032 INF: FPGA: Recv ZMV 
17-02-28 20:14:36.947 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:36.947 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.5476 ms
17-02-28 20:14:36.947 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:36.968 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:37.008 -08 000000095 INF: FPGA: Recv ZDACR 60292
17-02-28 20:14:37.008 -08 000000018 INF: Z Motor: MoveAndTrigger took 247.4068 ms w/comms
17-02-28 20:14:37.008 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:37.008 -08 000000018 INF: Z Motor: MoveAbsStepped took 247.5794 ms
17-02-28 20:14:37.009 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:37.009 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.018 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:14:37.018 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:14:37.070 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:37.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:37.081 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:14:37.090 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:14:37.090 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.090 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:37.092 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:14:37.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:37.093 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:37.094 -08 000000058 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:37.094 -08 000000086 INF: ===================Move X,Y===================
17-02-28 20:14:37.095 -08 000000086 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:37.095 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:37.095 -08 000000066 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:37.095 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:37.095 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:37.096 -08 000000098 INF: ===================Move X Motor without settling===================
17-02-28 20:14:37.096 -08 000000029 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:37.096 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000098 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:37.096 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000066 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:37.096 -08 000000029 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8307 mm
17-02-28 20:14:37.096 -08 000000029 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:37.096 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:37.097 -08 000000089 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:37.097 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:37.097 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:37.097 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:37.097 -08 000000069 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:37.097 -08 000000101 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:37.097 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:37.097 -08 000000064 INF: ======================================
17-02-28 20:14:37.097 -08 000000062 INF: ======================================
17-02-28 20:14:37.098 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:37.098 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:37.098 -08 000000089 INF: ======================================
17-02-28 20:14:37.098 -08 000000087 INF: ======================================
17-02-28 20:14:37.098 -08 000000037 INF: ======================================
17-02-28 20:14:37.100 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:37.100 -08 000000069 INF: ======================================
17-02-28 20:14:37.100 -08 000000045 INF: ======================================
17-02-28 20:14:37.100 -08 000000101 INF: ======================================
17-02-28 20:14:37.101 -08 000000095 INF: ======================================
17-02-28 20:14:37.101 -08 000000051 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:37.102 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:37.102 -08 000000066 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:37.103 -08 000000051 INF: ======================================
17-02-28 20:14:37.103 -08 000000076 INF: ======================================
17-02-28 20:14:37.103 -08 000000066 INF: ======================================
17-02-28 20:14:37.104 -08 000000058 INF: ======================================
17-02-28 20:14:37.138 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.138 -08 000000029 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:37.138 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:37.139 -08 000000098 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:37.139 -08 000000098 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:37.197 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.197 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Moving to 17.1989 mm @15.000 mm/sec, started at 15.0010 mm
17-02-28 20:14:37.198 -08 000000098 INF: X Motor: Xmit MA -17122\n
17-02-28 20:14:37.259 -08 000000098 INF: X Motor: Recv MA -17122\r\n>
17-02-28 20:14:37.259 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:37.259 -08 000000098 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:14:37.261 -08 000000029 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:14:37.324 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.324 -08 000000029 INF: Y Motor: Start the move command
17-02-28 20:14:37.324 -08 000000029 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:37.386 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:37.386 -08 000000029 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:37.386 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.510 -08 000000029 INF: Y Motor: Unshifted Position: 1062892
17-02-28 20:14:37.549 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:14:37.560 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.635 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:37.686 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.735 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:37.821 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:37.823 -08 000000029 INF: Y Motor: Unshifted Position: 1769735
17-02-28 20:14:37.873 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:37.884 -08 000000098 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:37.946 -08 000000098 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:37.946 -08 000000098 INF: X Motor: Moved to 17.1982 after 686 ms
17-02-28 20:14:37.946 -08 000000098 INF: ======================================
17-02-28 20:14:37.996 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.071 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:38.134 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:38.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:14:38.135 -08 000000029 INF: Y Motor: Unshifted Position: 2555591
17-02-28 20:14:38.185 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.310 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.445 -08 000000029 INF: Y Motor: Unshifted Position: 3333038
17-02-28 20:14:38.495 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.622 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.758 -08 000000029 INF: Y Motor: Unshifted Position: 4113938
17-02-28 20:14:38.808 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:38.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:14:38.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:14:38.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:38.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:38.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-02-28 20:14:38.932 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.069 -08 000000029 INF: Y Motor: Unshifted Position: 4896379
17-02-28 20:14:39.119 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.246 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:14:39.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.319 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:39.381 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:39.381 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:14:39.381 -08 000000042 INF: Valve B1: Go to position 1
17-02-28 20:14:39.381 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:39.382 -08 000000029 INF: Y Motor: Unshifted Position: 5670909
17-02-28 20:14:39.432 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:14:39.442 -08 000000042 INF: Valve B1: 18.389 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:14:39.442 -08 000000042 INF: Valve B1: Taking shortest path 'CW' from 8 to 1
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CW1\r
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:14:39.442 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:14:39.558 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:39.694 -08 000000029 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:14:39.694 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:39.694 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:39.756 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:39.756 -08 000000029 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:14:39.756 -08 000000029 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:39.818 -08 000000029 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:39.818 -08 000000029 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:39.818 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:39.879 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 1\r
17-02-28 20:14:39.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:39.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:14:39.880 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:39.880 -08 000000029 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:39.880 -08 000000029 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:39.946 -08 000000029 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:40.017 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:40.068 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:40.068 -08 000000029 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:40.068 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:40.130 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:14:40.130 -08 000000029 INF: ======================================
17-02-28 20:14:40.131 -08 000000086 INF: ===================Move X,Y===================
17-02-28 20:14:40.132 -08 000000086 INF: ======================================
17-02-28 20:14:40.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:40.135 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:40.135 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:14:40.135 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:14:40.192 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:40.192 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:14:40.256 -08 000000104 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:40.257 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:40.257 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:40.257 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:40.315 -08 000000038 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:14:40.315 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:14:40.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:40.317 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:40.318 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.318 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:40.318 -08 000000010 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:40.319 -08 000000044 INF: ======================================
17-02-28 20:14:40.319 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.320 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:40.321 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:40.321 -08 000000010 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:14:40.377 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:40.377 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:40.379 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:40.379 -08 000000010 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:14:40.440 -08 000000037 INF: FPGA: Recv TDIYARM2
17-02-28 20:14:40.441 -08 000000010 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:14:40.442 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.443 -08 000000010 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:40.444 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:40.445 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:40.446 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:40.447 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:40.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:14:40.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:40.502 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:40.566 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:40.574 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:14:40.666 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:14:40.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:14:40.755 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:14:40.817 -08 000000010 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:40.817 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:40.817 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:40.832 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:40.835 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:40.855 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:14:40.941 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:41.041 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:41.127 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:41.225 -08 000000010 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53822025616 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:14:41.225 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:14:41.225 -08 000000010 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:41.241 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:14:41.243 -08 000000010 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:14:41.245 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:41.247 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:41.248 -08 000000010 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:41.249 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:41.251 -08 000000010 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:41.252 -08 000000010 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:41.252 -08 000000010 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:14:41.252 -08 000000010 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:14:41.315 -08 000000104 INF: FPGA: Recv ZYT 
17-02-28 20:14:41.315 -08 000000010 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:14:41.315 -08 000000010 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:14:41.377 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:41.377 -08 000000032 INF: FPGA: Recv ZARM
17-02-28 20:14:41.377 -08 000000010 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2188 ms
17-02-28 20:14:41.377 -08 000000010 INF: Z Motor: ArmAbsStepped took 125.7475 ms
17-02-28 20:14:41.378 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:41.379 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:14:41.380 -08 000000010 INF: ======================================
17-02-28 20:14:41.382 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:41.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:41.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.384 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.385 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:41.385 -08 000000062 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:41.385 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:41.385 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:41.385 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:41.385 -08 000000062 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:41.385 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:41.385 -08 000000062 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:41.385 -08 000000062 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:41.386 -08 000000062 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:41.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:41.540 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:14:41.626 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:41.726 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:41.752 -08 000000087 INF: FPGA: Recv EX2MV
17-02-28 20:14:41.752 -08 000000087 INF: FPGA: Recv EX1MV
17-02-28 20:14:41.752 -08 000000062 INF: Excitation Filter 1: Moved -107 steps in 366.8759 ms
17-02-28 20:14:41.752 -08 000000062 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.0828 ms
17-02-28 20:14:41.752 -08 000000062 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.1811 ms
17-02-28 20:14:41.752 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 367.0432 ms
17-02-28 20:14:41.752 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.4565 ms
17-02-28 20:14:41.752 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.5256 ms
17-02-28 20:14:41.753 -08 000000062 INF: ======================================
17-02-28 20:14:41.753 -08 000000038 INF: ======================================
17-02-28 20:14:41.754 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:41.756 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:14:41.756 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:41.756 -08 000000047 INF: ===================Serial===================
17-02-28 20:14:41.757 -08 000000101 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:14:41.757 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:41.757 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:41.757 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:41.757 -08 000000010 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:41.758 -08 000000047 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:14:41.758 -08 000000047 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:41.758 -08 000000058 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:41.758 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:14:41.758 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:14:41.759 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.759 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.760 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.760 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.763 -08 000000058 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:41.815 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:41.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:14:41.816 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:41.816 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:41.816 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:41.879 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:41.879 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:41.909 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.909 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.910 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:41.910 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:41.915 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP9600R\r
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:14:41.941 -08 000000101 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:14:42.002 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.003 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:42.003 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:14:42.003 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:42.059 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.059 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.060 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.060 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.065 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:42.065 -08 000000101 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:14:42.065 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.102 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:42.190 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.191 -08 000000101 INF: Y Motor: Unshifted Position: 5929034
17-02-28 20:14:42.209 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.209 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.210 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:42.210 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:42.241 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.359 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:42.359 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:42.359 -08 000000057 INF: ===================Camera #0 Frame #1===================
17-02-28 20:14:42.360 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:14:42.360 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:14:42.360 -08 000000050 INF: ===================Camera #2 Frame #1===================
17-02-28 20:14:42.365 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:42.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.502 -08 000000101 INF: Y Motor: Unshifted Position: 5882029
17-02-28 20:14:42.512 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:42.512 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:42.512 -08 000000057 INF: ===================Camera #0 Frame #3===================
17-02-28 20:14:42.513 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:14:42.513 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:14:42.513 -08 000000050 INF: ===================Camera #2 Frame #3===================
17-02-28 20:14:42.552 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.668 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:42.668 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:42.668 -08 000000057 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:42.673 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:42.673 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:42.673 -08 000000050 INF: ===================Camera #2 Frame #4===================
17-02-28 20:14:42.678 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:42.814 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:42.815 -08 000000101 INF: Y Motor: Unshifted Position: 5835226
17-02-28 20:14:42.821 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:42.821 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:42.821 -08 000000057 INF: ===================Camera #0 Frame #5===================
17-02-28 20:14:42.827 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:42.827 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:42.827 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:42.865 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:42.875 -08 000000102 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:42.875 -08 000000102 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:42.875 -08 000000047 INF: ===================Serial===================
17-02-28 20:14:42.876 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:42.877 -08 000000047 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:14:42.877 -08 000000058 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:42.877 -08 000000047 INF: ===================Serial===================
17-02-28 20:14:42.878 -08 000000069 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:42.878 -08 000000037 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:42.878 -08 000000069 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:42.878 -08 000000069 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:42.878 -08 000000069 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:42.878 -08 000000069 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:42.878 -08 000000037 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:42.878 -08 000000037 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:42.878 -08 000000037 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:42.879 -08 000000047 INF: ======================================
17-02-28 20:14:42.881 -08 000000037 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:42.974 -08 000000057 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:42.974 -08 000000057 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:42.974 -08 000000057 INF: ===================Camera #0 Frame #6===================
17-02-28 20:14:42.977 -08 000000057 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:42.978 -08 000000057 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:42.993 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:43.003 -08 000000057 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:43.003 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:14:43.004 -08 000000057 INF: ======================================
17-02-28 20:14:43.004 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:14:43.004 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:14:43.005 -08 000000050 INF: ===================Camera #2 Frame #6===================
17-02-28 20:14:43.008 -08 000000050 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:14:43.009 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:43.034 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:43.034 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:14:43.035 -08 000000050 INF: ======================================
17-02-28 20:14:43.037 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:14:43.038 -08 000000010 INF: ======================================
17-02-28 20:14:43.064 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:43.125 -08 000000101 INF: Y Motor: Unshifted Position: 5790759
17-02-28 20:14:43.175 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:43.249 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:14:43.249 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:14:43.249 -08 000000037 INF: Excitation Filter 2: Moved 107 steps in 370.4289 ms
17-02-28 20:14:43.249 -08 000000069 INF: Excitation Filter 1: Moved 107 steps in 370.6312 ms
17-02-28 20:14:43.249 -08 000000069 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7581 ms
17-02-28 20:14:43.249 -08 000000069 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8312 ms
17-02-28 20:14:43.249 -08 000000037 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.5438 ms
17-02-28 20:14:43.249 -08 000000037 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.9425 ms
17-02-28 20:14:43.250 -08 000000069 INF: ======================================
17-02-28 20:14:43.250 -08 000000037 INF: ======================================
17-02-28 20:14:43.251 -08 000000058 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:43.252 -08 000000058 INF: ======================================
17-02-28 20:14:43.313 -08 000000101 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:14:43.313 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:43.313 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:43.374 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.376 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:43.376 -08 000000101 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:14:43.376 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:43.439 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:43.440 -08 000000101 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:43.440 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:43.440 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:43.501 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:43.501 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:43.501 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:43.564 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:43.626 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:43.687 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:43.687 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:43.687 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:43.689 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.748 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:43.751 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:14:43.751 -08 000000101 INF: ======================================
17-02-28 20:14:43.752 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:43.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:14:43.754 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:43.754 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:43.813 -08 000000086 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:43.814 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:43.873 -08 000000053 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:14:43.873 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:43.936 -08 000000057 INF: FPGA: Recv ZADCR 2426
17-02-28 20:14:43.936 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:14:43.936 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:43.998 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:43.998 -08 000000100 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:14:43.998 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:14:43.998 -08 000000018 INF: TDIScan finished after 6917.6169 ms
17-02-28 20:14:43.998 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:43.998 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:14:43.999 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:44.060 -08 000000087 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:44.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:44.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.062 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:44.062 -08 000000030 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:44.062 -08 000000095 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:44.063 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:44.063 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:44.063 -08 000000030 INF: ======================================
17-02-28 20:14:44.063 -08 000000095 INF: ======================================
17-02-28 20:14:44.125 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:14:44.125 -08 000000104 INF: ======================================
17-02-28 20:14:44.126 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:44.178 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.179 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:44.221 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.221 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:44.263 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.263 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:44.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:14:44.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.297 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.298 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:14:44.306 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.306 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:14:44.306 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:14:44.311 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:44.373 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:44.623 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:44.685 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:44.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:44.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:14:44.958 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0577720601282669Best Z position at top surface = -0.128189561205607Best Z position at top surface + compensator offset = -0.105489561205607 C:3,L:5,T
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.128189561205607
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.76079
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0577720601282669
17-02-28 20:14:44.960 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.42165
17-02-28 20:14:44.960 -08 000000018 INF: Z-height at LaneTopSurface is -0.128189561205607.
17-02-28 20:14:44.960 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:44.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:45.092 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:45.093 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:45.119 -08 000000044 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:45.119 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:14:45.121 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.121 -08 000000018 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:14:45.121 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.122 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.122 -08 000000057 INF: ===================Move Tilt Motor 1===================
17-02-28 20:14:45.122 -08 000000034 INF: ===================Move Tilt Motor 2===================
17-02-28 20:14:45.123 -08 000000109 INF: ===================Move Tilt Motor 3===================
17-02-28 20:14:45.123 -08 000000034 INF: ======================================
17-02-28 20:14:45.123 -08 000000109 INF: ======================================
17-02-28 20:14:45.124 -08 000000057 INF: ======================================
17-02-28 20:14:45.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.126 -08 000000018 INF: ETF Best Z: -0.1054896 mm (27653 DAC)
17-02-28 20:14:45.126 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.127 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:14:45.127 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:14:45.559 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:45.559 -08 000000064 INF: FPGA: Recv MIOCOMPF
17-02-28 20:14:45.559 -08 000000018 INF: Compensator: Moved IntoPath in 432 ms
17-02-28 20:14:45.560 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.561 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:45.567 -08 000000018 INF: Swath 1 position calculated to be: {X=16.64493, Y=39.70011} from estimated center X= 17.122, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:45.567 -08 000000018 INF: Swath 2 position calculated to be: {X=17.75293, Y=39.70011} from estimated center X= 17.122, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:14:45.573 -08 000000018 INF: Swath 0: Converted transform from (49.71588, -28.0713) pixels to (0.01725, -0.00966) mm.
17-02-28 20:14:45.578 -08 000000018 INF: Swath 1: Converted transform from (30.42066, -23.31389) pixels to (0.01035, -0.007935) mm.
17-02-28 20:14:45.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:45.579 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:45.580 -08 000000018 INF: Transformed XStagePosition from 16.64493 mm to 16.6621798854321 mm.
17-02-28 20:14:45.591 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4804563330263 mm.
17-02-28 20:14:45.591 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2804563330263 mm.
17-02-28 20:14:45.591 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3712063330263 mm.
17-02-28 20:14:45.593 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:45.593 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:45.593 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:45.593 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:14:45.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:45.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:45.603 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:45.603 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:14:45.603 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:45.604 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:45.604 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:45.604 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:45.604 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:45.604 -08 000000051 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:45.604 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:45.605 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:45.605 -08 000000106 INF: ===================Move X Motor without settling===================
17-02-28 20:14:45.605 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:45.605 -08 000000106 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:45.605 -08 000000058 INF: Y Motor: Moving to 64.4805 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:14:45.605 -08 000000050 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:45.605 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:45.606 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:45.606 -08 000000029 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:45.606 -08 000000076 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:45.606 -08 000000062 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:45.606 -08 000000055 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:45.606 -08 000000108 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:45.606 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:45.606 -08 000000050 INF: ======================================
17-02-28 20:14:45.606 -08 000000069 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:45.606 -08 000000055 INF: ======================================
17-02-28 20:14:45.606 -08 000000108 INF: ======================================
17-02-28 20:14:45.607 -08 000000069 INF: ======================================
17-02-28 20:14:45.607 -08 000000029 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:45.607 -08 000000044 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:45.607 -08 000000044 INF: Z Motor: Moving to -0.1255 mm, started at -0.0100 mm
17-02-28 20:14:45.607 -08 000000044 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:14:45.607 -08 000000062 INF: ======================================
17-02-28 20:14:45.607 -08 000000066 INF: ======================================
17-02-28 20:14:45.608 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:45.608 -08 000000029 INF: ======================================
17-02-28 20:14:45.609 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:45.609 -08 000000076 INF: ======================================
17-02-28 20:14:45.609 -08 000000034 INF: ======================================
17-02-28 20:14:45.609 -08 000000098 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:45.610 -08 000000057 INF: ======================================
17-02-28 20:14:45.610 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:45.610 -08 000000098 INF: ======================================
17-02-28 20:14:45.611 -08 000000109 INF: ======================================
17-02-28 20:14:45.612 -08 000000087 INF: ======================================
17-02-28 20:14:45.621 -08 000000045 INF: FPGA: Recv ZTRG 
17-02-28 20:14:45.621 -08 000000044 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:14:45.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:45.683 -08 000000029 INF: FPGA: Recv ZYT 
17-02-28 20:14:45.683 -08 000000044 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:14:45.683 -08 000000044 INF: FPGA: Xmit ZMV 32896\n
17-02-28 20:14:45.685 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.685 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:45.685 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:45.685 -08 000000106 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:45.685 -08 000000106 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:45.747 -08 000000086 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:14:45.748 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:14:45.749 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.749 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Moving to 16.6622 mm @15.000 mm/sec, started at 17.1982 mm
17-02-28 20:14:45.750 -08 000000106 INF: X Motor: Xmit MA -17342\n
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:45.809 -08 000000106 INF: X Motor: Recv MA -17342\r\n>
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Set target position to 5948046 encoder counts
17-02-28 20:14:45.809 -08 000000058 INF: Y Motor: Xmit s r0xca 5948046\r
17-02-28 20:14:45.809 -08 000000106 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:14:45.869 -08 000000095 INF: FPGA: Recv ZMV 
17-02-28 20:14:45.869 -08 000000044 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.964 ms
17-02-28 20:14:45.869 -08 000000044 INF: FPGA: Xmit ZDACR\n
17-02-28 20:14:45.871 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.871 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:14:45.871 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:45.872 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:45.933 -08 000000108 INF: FPGA: Recv ZDACR 32896
17-02-28 20:14:45.933 -08 000000044 INF: Z Motor: MoveAndTrigger took 326.235 ms w/comms
17-02-28 20:14:45.933 -08 000000044 INF: Z Motor: After move to -0.1255, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:14:45.933 -08 000000044 INF: Z Motor: MoveAbsStepped took 326.403 ms
17-02-28 20:14:45.934 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:45.935 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:45.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:45.935 -08 000000058 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:14:45.935 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:45.935 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:45.936 -08 000000081 INF: ===================Camera Arm TDI===================
17-02-28 20:14:45.936 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:45.937 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:45.937 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:45.937 -08 000000081 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:45.938 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:45.938 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:45.938 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:45.995 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:14:45.996 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:45.996 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:46.057 -08 000000090 INF: FPGA: Recv TDIBB
17-02-28 20:14:46.057 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:46.058 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:46.059 -08 000000058 INF: Y Motor: Unshifted Position: 5874681
17-02-28 20:14:46.059 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.060 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:46.061 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:46.061 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:46.109 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:46.120 -08 000000095 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:46.120 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.122 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:46.122 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.124 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:46.124 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:46.124 -08 000000087 INF: Z Motor: Arming to move to -0.0855 mm
17-02-28 20:14:46.124 -08 000000087 INF: FPGA: Xmit ZYT 6428046 4\n
17-02-28 20:14:46.182 -08 000000109 INF: FPGA: Recv ZYT 
17-02-28 20:14:46.182 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6374681 enc / 63.747 mm / ) = 6428046 enc / 64.280 mm
17-02-28 20:14:46.182 -08 000000087 INF: FPGA: Xmit ZARM 22410\n
17-02-28 20:14:46.185 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:46.237 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:46.245 -08 000000062 INF: FPGA: Recv ZARM
17-02-28 20:14:46.245 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7625 ms
17-02-28 20:14:46.245 -08 000000087 INF: Z Motor: ArmAbsStepped took 119.6451 ms
17-02-28 20:14:46.245 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:46.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:46.246 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:46.247 -08 000000106 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:46.248 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:46.248 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:46.250 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:46.250 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:14:46.252 -08 000000087 INF: ======================================
17-02-28 20:14:46.310 -08 000000106 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:46.310 -08 000000106 INF: X Motor: Moved to 16.6611 after 500 ms
17-02-28 20:14:46.310 -08 000000106 INF: ======================================
17-02-28 20:14:46.371 -08 000000058 INF: Y Motor: Unshifted Position: 5948048
17-02-28 20:14:46.371 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:46.371 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:46.433 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:46.433 -08 000000058 INF: Y Motor: Moved to 64.4805 after 497 ms
17-02-28 20:14:46.433 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:46.495 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:14:46.495 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:46.495 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:46.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:46.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:46.559 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:46.559 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:46.559 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:46.622 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:46.682 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:46.747 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:46.747 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:46.747 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:46.808 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:14:46.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:46.808 -08 000000058 INF: ======================================
17-02-28 20:14:46.809 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:14:46.810 -08 000000051 INF: ======================================
17-02-28 20:14:46.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:46.906 -08 000000081 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:46.906 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:46.906 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:46.922 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:46.924 -08 000000081 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:47.119 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:47.182 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:47.432 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:47.495 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:47.745 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:47.806 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:47.990 -08 000000081 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:47.990 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:47.990 -08 000000081 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:48.005 -08 000000081 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:48.007 -08 000000081 INF: ===================Camera Arm TDI===================
17-02-28 20:14:48.008 -08 000000081 INF: ======================================
17-02-28 20:14:48.009 -08 000000044 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:48.010 -08 000000044 INF: ======================================
17-02-28 20:14:48.011 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:48.012 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:48.012 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:14:48.012 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:14:48.055 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.055 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:14:48.056 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.117 -08 000000010 INF: FPGA: Recv ZFREQCL
17-02-28 20:14:48.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:14:48.117 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:48.117 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:48.118 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:48.179 -08 000000069 INF: FPGA: Recv TDIYERD 6448047
17-02-28 20:14:48.179 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448047 counts (64.480 mm)
17-02-28 20:14:48.179 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:48.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:48.180 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:48.181 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:14:48.181 -08 000000108 INF: ======================================
17-02-28 20:14:48.181 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:48.182 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:14:48.182 -08 000000052 INF: FPGA: Xmit TDIYPOS 6337121\n
17-02-28 20:14:48.241 -08 000000010 INF: FPGA: Recv TDIYPOS
17-02-28 20:14:48.241 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:48.243 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:14:48.243 -08 000000052 INF: FPGA: Xmit TDIYARM3 139264 6428046 1 1\n
17-02-28 20:14:48.305 -08 000000029 INF: FPGA: Recv TDIYARM3
17-02-28 20:14:48.305 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:14:48.306 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:14:48.307 -08 000000052 INF: ======================================
17-02-28 20:14:48.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:14:48.309 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:48.309 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.311 -08 000000062 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:14:48.311 -08 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:14:48.311 -08 000000062 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:14:48.311 -08 000000062 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:14:48.311 -08 000000062 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:14:48.311 -08 000000034 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:14:48.311 -08 000000062 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:14:48.311 -08 000000034 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:14:48.311 -08 000000034 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:14:48.312 -08 000000034 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:14:48.368 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.430 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:48.677 -08 000000100 INF: FPGA: Recv EX2MV
17-02-28 20:14:48.677 -08 000000100 INF: FPGA: Recv EX1MV
17-02-28 20:14:48.677 -08 000000034 INF: Excitation Filter 1: Moved -107 steps in 365.4837 ms
17-02-28 20:14:48.677 -08 000000034 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.6156 ms
17-02-28 20:14:48.677 -08 000000034 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.6841 ms
17-02-28 20:14:48.677 -08 000000062 INF: Excitation Filter 2: Moved -107 steps in 365.6791 ms
17-02-28 20:14:48.677 -08 000000062 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.8707 ms
17-02-28 20:14:48.677 -08 000000062 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.9628 ms
17-02-28 20:14:48.677 -08 000000034 INF: ======================================
17-02-28 20:14:48.677 -08 000000062 INF: ======================================
17-02-28 20:14:48.678 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:48.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.680 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:14:48.680 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:48.680 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:14:48.680 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:48.681 -08 000000098 INF: Y Motor: Moving to 14.8321 mm @6.500 mm/sec, started at 64.4805 mm
17-02-28 20:14:48.681 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:14:48.681 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:48.681 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:48.681 -08 000000106 INF: ===================Camera TDI, Parallel===================
17-02-28 20:14:48.681 -08 000000032 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:14:48.682 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:48.682 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:48.682 -08 000000032 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:14:48.684 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.684 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.686 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.686 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.742 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:48.743 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.743 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:48.743 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:48.805 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.805 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:48.834 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.834 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.836 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.836 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Set target position to 983212 encoder counts
17-02-28 20:14:48.866 -08 000000098 INF: Y Motor: Xmit s r0xca 983212\r
17-02-28 20:14:48.931 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.931 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:14:48.931 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:48.984 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.984 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.986 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:14:48.986 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:14:48.992 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:48.992 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:48.992 -08 000000098 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:14:48.992 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.052 -08 000000010 INF: FPGA: Recv ZWAIT 
17-02-28 20:14:49.052 -08 000000064 INF: ======================================
17-02-28 20:14:49.053 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.116 -08 000000098 INF: Y Motor: Unshifted Position: 5886621
17-02-28 20:14:49.134 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:14:49.134 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:14:49.134 -08 000000081 INF: ===================Camera #0 Frame #4===================
17-02-28 20:14:49.136 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:14:49.136 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:14:49.136 -08 000000066 INF: ===================Camera #2 Frame #5===================
17-02-28 20:14:49.166 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.294 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.298 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:14:49.298 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:14:49.298 -08 000000081 INF: ===================Camera #0 Frame #10===================
17-02-28 20:14:49.303 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:49.303 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:14:49.303 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:14:49.303 -08 000000066 INF: ===================Camera #2 Frame #11===================
17-02-28 20:14:49.366 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.430 -08 000000098 INF: Y Motor: Unshifted Position: 5682958
17-02-28 20:14:49.468 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:49.468 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:49.468 -08 000000081 INF: ===================Camera #0 Frame #17===================
17-02-28 20:14:49.474 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:14:49.474 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:14:49.474 -08 000000066 INF: ===================Camera #2 Frame #17===================
17-02-28 20:14:49.480 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.604 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.616 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:49.642 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:49.642 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:49.642 -08 000000081 INF: ===================Camera #0 Frame #23===================
17-02-28 20:14:49.645 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:14:49.645 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:14:49.645 -08 000000066 INF: ===================Camera #2 Frame #23===================
17-02-28 20:14:49.676 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.741 -08 000000098 INF: Y Motor: Unshifted Position: 5481460
17-02-28 20:14:49.791 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.812 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:14:49.812 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:14:49.812 -08 000000081 INF: ===================Camera #0 Frame #29===================
17-02-28 20:14:49.816 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:14:49.816 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:14:49.816 -08 000000066 INF: ===================Camera #2 Frame #30===================
17-02-28 20:14:49.917 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:49.926 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:49.982 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:49.982 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:49.982 -08 000000081 INF: ===================Camera #0 Frame #36===================
17-02-28 20:14:49.990 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:49.990 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:14:49.990 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:14:49.990 -08 000000066 INF: ===================Camera #2 Frame #36===================
17-02-28 20:14:50.053 -08 000000098 INF: Y Motor: Unshifted Position: 5277360
17-02-28 20:14:50.103 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.156 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:50.156 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:50.156 -08 000000081 INF: ===================Camera #0 Frame #42===================
17-02-28 20:14:50.161 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:14:50.161 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:14:50.161 -08 000000066 INF: ===================Camera #2 Frame #42===================
17-02-28 20:14:50.227 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.240 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:50.302 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:50.326 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:14:50.326 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:14:50.326 -08 000000081 INF: ===================Camera #0 Frame #48===================
17-02-28 20:14:50.332 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:14:50.332 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:14:50.332 -08 000000066 INF: ===================Camera #2 Frame #49===================
17-02-28 20:14:50.365 -08 000000098 INF: Y Motor: Unshifted Position: 5074344
17-02-28 20:14:50.415 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.496 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:14:50.496 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:14:50.496 -08 000000081 INF: ===================Camera #0 Frame #55===================
17-02-28 20:14:50.506 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:14:50.506 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:14:50.506 -08 000000066 INF: ===================Camera #2 Frame #55===================
17-02-28 20:14:50.541 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.552 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:50.614 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:50.670 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:50.670 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:50.670 -08 000000081 INF: ===================Camera #0 Frame #61===================
17-02-28 20:14:50.677 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:14:50.677 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:14:50.677 -08 000000066 INF: ===================Camera #2 Frame #61===================
17-02-28 20:14:50.678 -08 000000098 INF: Y Motor: Unshifted Position: 4871546
17-02-28 20:14:50.728 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.840 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:14:50.840 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:14:50.840 -08 000000081 INF: ===================Camera #0 Frame #67===================
17-02-28 20:14:50.848 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:14:50.848 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:14:50.848 -08 000000066 INF: ===================Camera #2 Frame #68===================
17-02-28 20:14:50.852 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:50.864 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:50.925 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:50.990 -08 000000098 INF: Y Motor: Unshifted Position: 4669828
17-02-28 20:14:51.010 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:14:51.010 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:14:51.010 -08 000000081 INF: ===================Camera #0 Frame #74===================
17-02-28 20:14:51.022 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:14:51.022 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:14:51.022 -08 000000066 INF: ===================Camera #2 Frame #74===================
17-02-28 20:14:51.040 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.165 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.175 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:51.184 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:14:51.184 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:14:51.184 -08 000000081 INF: ===================Camera #0 Frame #80===================
17-02-28 20:14:51.193 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:14:51.194 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:14:51.194 -08 000000066 INF: ===================Camera #2 Frame #80===================
17-02-28 20:14:51.238 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:51.300 -08 000000098 INF: Y Motor: Unshifted Position: 4465066
17-02-28 20:14:51.350 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.354 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:14:51.354 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:14:51.354 -08 000000081 INF: ===================Camera #0 Frame #86===================
17-02-28 20:14:51.365 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:14:51.365 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:14:51.365 -08 000000066 INF: ===================Camera #2 Frame #87===================
17-02-28 20:14:51.476 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.488 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:51.524 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:14:51.524 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:14:51.524 -08 000000081 INF: ===================Camera #0 Frame #92===================
17-02-28 20:14:51.539 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:14:51.539 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:14:51.539 -08 000000066 INF: ===================Camera #2 Frame #93===================
17-02-28 20:14:51.550 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:51.614 -08 000000098 INF: Y Motor: Unshifted Position: 4262707
17-02-28 20:14:51.664 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.694 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:14:51.694 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:14:51.694 -08 000000081 INF: ===================Camera #0 Frame #99===================
17-02-28 20:14:51.710 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:14:51.710 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:14:51.710 -08 000000066 INF: ===================Camera #2 Frame #99===================
17-02-28 20:14:51.789 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:51.800 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:51.861 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:51.867 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:14:51.867 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:14:51.867 -08 000000081 INF: ===================Camera #0 Frame #105===================
17-02-28 20:14:51.881 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:14:51.881 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:14:51.881 -08 000000066 INF: ===================Camera #2 Frame #106===================
17-02-28 20:14:51.926 -08 000000098 INF: Y Motor: Unshifted Position: 4060328
17-02-28 20:14:51.976 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.037 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:14:52.037 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:14:52.037 -08 000000081 INF: ===================Camera #0 Frame #111===================
17-02-28 20:14:52.055 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:14:52.055 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:14:52.055 -08 000000066 INF: ===================Camera #2 Frame #112===================
17-02-28 20:14:52.101 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.111 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:52.174 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:52.207 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:14:52.207 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:14:52.207 -08 000000081 INF: ===================Camera #0 Frame #118===================
17-02-28 20:14:52.226 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:14:52.226 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:14:52.226 -08 000000066 INF: ===================Camera #2 Frame #118===================
17-02-28 20:14:52.237 -08 000000098 INF: Y Motor: Unshifted Position: 3856881
17-02-28 20:14:52.287 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.380 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:14:52.380 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:14:52.380 -08 000000081 INF: ===================Camera #0 Frame #124===================
17-02-28 20:14:52.397 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:14:52.397 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:14:52.397 -08 000000066 INF: ===================Camera #2 Frame #125===================
17-02-28 20:14:52.411 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.424 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:52.488 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:52.549 -08 000000098 INF: Y Motor: Unshifted Position: 3653426
17-02-28 20:14:52.550 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:14:52.550 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:14:52.550 -08 000000081 INF: ===================Camera #0 Frame #130===================
17-02-28 20:14:52.571 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:14:52.571 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:14:52.571 -08 000000066 INF: ===================Camera #2 Frame #131===================
17-02-28 20:14:52.599 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.720 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:14:52.720 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:14:52.720 -08 000000081 INF: ===================Camera #0 Frame #136===================
17-02-28 20:14:52.723 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.738 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:52.742 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:14:52.742 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:14:52.742 -08 000000066 INF: ===================Camera #2 Frame #137===================
17-02-28 20:14:52.796 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:52.862 -08 000000098 INF: Y Motor: Unshifted Position: 3452364
17-02-28 20:14:52.890 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:14:52.890 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:14:52.890 -08 000000081 INF: ===================Camera #0 Frame #143===================
17-02-28 20:14:52.912 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:52.913 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:14:52.913 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:14:52.913 -08 000000066 INF: ===================Camera #2 Frame #144===================
17-02-28 20:14:53.038 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.046 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:53.063 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:14:53.063 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:14:53.063 -08 000000081 INF: ===================Camera #0 Frame #149===================
17-02-28 20:14:53.087 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:14:53.087 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:14:53.087 -08 000000066 INF: ===================Camera #2 Frame #150===================
17-02-28 20:14:53.110 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:53.174 -08 000000098 INF: Y Motor: Unshifted Position: 3248264
17-02-28 20:14:53.224 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.233 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:14:53.233 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:14:53.233 -08 000000081 INF: ===================Camera #0 Frame #155===================
17-02-28 20:14:53.258 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:14:53.258 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:14:53.258 -08 000000066 INF: ===================Camera #2 Frame #156===================
17-02-28 20:14:53.346 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.360 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:53.403 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:14:53.403 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:14:53.403 -08 000000081 INF: ===================Camera #0 Frame #162===================
17-02-28 20:14:53.422 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:53.429 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:14:53.429 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:14:53.429 -08 000000066 INF: ===================Camera #2 Frame #163===================
17-02-28 20:14:53.485 -08 000000098 INF: Y Motor: Unshifted Position: 3045257
17-02-28 20:14:53.535 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.576 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:14:53.576 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:14:53.576 -08 000000081 INF: ===================Camera #0 Frame #168===================
17-02-28 20:14:53.603 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:14:53.603 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:14:53.603 -08 000000066 INF: ===================Camera #2 Frame #169===================
17-02-28 20:14:53.658 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.672 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:53.732 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:53.746 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:14:53.746 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:14:53.746 -08 000000081 INF: ===================Camera #0 Frame #174===================
17-02-28 20:14:53.774 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:14:53.774 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:14:53.774 -08 000000066 INF: ===================Camera #2 Frame #175===================
17-02-28 20:14:53.797 -08 000000098 INF: Y Motor: Unshifted Position: 2843758
17-02-28 20:14:53.847 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.916 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:14:53.916 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:14:53.916 -08 000000081 INF: ===================Camera #0 Frame #181===================
17-02-28 20:14:53.945 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:14:53.945 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:14:53.945 -08 000000066 INF: ===================Camera #2 Frame #182===================
17-02-28 20:14:53.971 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:53.982 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.044 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:54.089 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:14:54.089 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:14:54.089 -08 000000081 INF: ===================Camera #0 Frame #187===================
17-02-28 20:14:54.111 -08 000000098 INF: Y Motor: Unshifted Position: 2640740
17-02-28 20:14:54.119 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:14:54.119 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:14:54.119 -08 000000066 INF: ===================Camera #2 Frame #188===================
17-02-28 20:14:54.161 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.259 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:14:54.259 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:14:54.259 -08 000000081 INF: ===================Camera #0 Frame #193===================
17-02-28 20:14:54.284 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.290 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:14:54.290 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:14:54.290 -08 000000066 INF: ===================Camera #2 Frame #194===================
17-02-28 20:14:54.294 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.358 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:54.422 -08 000000098 INF: Y Motor: Unshifted Position: 2436651
17-02-28 20:14:54.429 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:14:54.429 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:14:54.429 -08 000000081 INF: ===================Camera #0 Frame #199===================
17-02-28 20:14:54.461 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:14:54.461 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:14:54.461 -08 000000066 INF: ===================Camera #2 Frame #201===================
17-02-28 20:14:54.472 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.596 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.599 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:14:54.599 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:14:54.599 -08 000000081 INF: ===================Camera #0 Frame #206===================
17-02-28 20:14:54.608 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.635 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:14:54.635 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:14:54.635 -08 000000066 INF: ===================Camera #2 Frame #207===================
17-02-28 20:14:54.669 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:54.734 -08 000000098 INF: Y Motor: Unshifted Position: 2234928
17-02-28 20:14:54.772 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:14:54.772 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:14:54.772 -08 000000081 INF: ===================Camera #0 Frame #212===================
17-02-28 20:14:54.784 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.806 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:14:54.806 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:14:54.806 -08 000000066 INF: ===================Camera #2 Frame #213===================
17-02-28 20:14:54.906 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:54.919 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:54.942 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:14:54.942 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:14:54.942 -08 000000081 INF: ===================Camera #0 Frame #218===================
17-02-28 20:14:54.977 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:14:54.977 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:14:54.977 -08 000000066 INF: ===================Camera #2 Frame #220===================
17-02-28 20:14:54.980 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:14:55.046 -08 000000098 INF: Y Motor: Unshifted Position: 2031911
17-02-28 20:14:55.096 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.112 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:14:55.112 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:14:55.112 -08 000000081 INF: ===================Camera #0 Frame #225===================
17-02-28 20:14:55.151 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:14:55.151 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:14:55.151 -08 000000066 INF: ===================Camera #2 Frame #226===================
17-02-28 20:14:55.220 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.230 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:14:55.286 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:14:55.286 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:14:55.286 -08 000000081 INF: ===================Camera #0 Frame #231===================
17-02-28 20:14:55.292 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:14:55.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:55.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:55.293 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:14:55.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:14:55.322 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:14:55.322 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:14:55.322 -08 000000066 INF: ===================Camera #2 Frame #232===================
17-02-28 20:14:55.358 -08 000000098 INF: Y Motor: Unshifted Position: 1829106
17-02-28 20:14:55.408 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.456 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:14:55.456 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:14:55.456 -08 000000081 INF: ===================Camera #0 Frame #237===================
17-02-28 20:14:55.493 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:14:55.493 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:14:55.493 -08 000000066 INF: ===================Camera #2 Frame #239===================
17-02-28 20:14:55.532 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.626 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:14:55.626 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:14:55.626 -08 000000081 INF: ===================Camera #0 Frame #243===================
17-02-28 20:14:55.667 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:14:55.667 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:14:55.667 -08 000000066 INF: ===================Camera #2 Frame #245===================
17-02-28 20:14:55.668 -08 000000098 INF: Y Motor: Unshifted Position: 1625442
17-02-28 20:14:55.718 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.796 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:14:55.796 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:14:55.796 -08 000000081 INF: ===================Camera #0 Frame #250===================
17-02-28 20:14:55.838 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:14:55.838 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:14:55.838 -08 000000066 INF: ===================Camera #2 Frame #251===================
17-02-28 20:14:55.842 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:55.970 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:14:55.970 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:14:55.970 -08 000000081 INF: ===================Camera #0 Frame #256===================
17-02-28 20:14:55.982 -08 000000098 INF: Y Motor: Unshifted Position: 1423288
17-02-28 20:14:56.009 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:14:56.009 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:14:56.009 -08 000000066 INF: ===================Camera #2 Frame #258===================
17-02-28 20:14:56.032 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.140 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:14:56.140 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:14:56.140 -08 000000081 INF: ===================Camera #0 Frame #262===================
17-02-28 20:14:56.156 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.183 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:14:56.183 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:14:56.183 -08 000000066 INF: ===================Camera #2 Frame #264===================
17-02-28 20:14:56.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:56.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:14:56.295 -08 000000098 INF: Y Motor: Unshifted Position: 1219613
17-02-28 20:14:56.311 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:14:56.311 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:14:56.311 -08 000000081 INF: ===================Camera #0 Frame #269===================
17-02-28 20:14:56.345 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.355 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:14:56.355 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:14:56.355 -08 000000066 INF: ===================Camera #2 Frame #270===================
17-02-28 20:14:56.403 -08 000000050 INF: RunCopyService queue size at 2/28/2017 8:14:56 PM is 2
17-02-28 20:14:56.415 -08 000000055 INF: FPGA: Recv TDIYWAIT
17-02-28 20:14:56.415 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:56.417 -08 000000032 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:14:56.417 -08 000000062 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:14:56.418 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:14:56.418 -08 000000062 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:14:56.418 -08 000000062 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:14:56.418 -08 000000062 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:14:56.418 -08 000000062 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:14:56.418 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:14:56.418 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:14:56.418 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:14:56.419 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:14:56.467 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.483 -08 000000081 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:56.483 -08 000000081 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:56.483 -08 000000081 INF: ===================Camera #0 Frame #272===================
17-02-28 20:14:56.493 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:56.494 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:56.607 -08 000000098 INF: Y Motor: Unshifted Position: 1015518
17-02-28 20:14:56.657 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:56.662 -08 000000081 INF: Camera #0 ReleaseBuffer
17-02-28 20:14:56.662 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:14:56.662 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:14:56.662 -08 000000066 INF: ===================Camera #2 Frame #272===================
17-02-28 20:14:56.662 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:14:56.669 -08 000000066 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:14:56.670 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:14:56.696 -08 000000081 INF: ======================================
17-02-28 20:14:56.793 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:14:56.793 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:14:56.793 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 374.9293 ms
17-02-28 20:14:56.793 -08 000000062 INF: Excitation Filter 1: Moved 107 steps in 375.1338 ms
17-02-28 20:14:56.793 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 375.0575 ms
17-02-28 20:14:56.793 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 375.1738 ms
17-02-28 20:14:56.793 -08 000000062 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 375.2395 ms
17-02-28 20:14:56.793 -08 000000062 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 375.4536 ms
17-02-28 20:14:56.793 -08 000000095 INF: ======================================
17-02-28 20:14:56.793 -08 000000062 INF: ======================================
17-02-28 20:14:56.795 -08 000000098 INF: Y Motor: Unshifted Position: 983211
17-02-28 20:14:56.795 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:14:56.795 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:56.795 -08 000000032 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:14:56.796 -08 000000032 INF: ======================================
17-02-28 20:14:56.854 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:56.854 -08 000000098 INF: Y Motor: Moved to 14.8321 after 7861 ms
17-02-28 20:14:56.854 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:14:56.868 -08 000000066 INF: Camera #2 ReleaseBuffer
17-02-28 20:14:56.868 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:14:56.902 -08 000000066 INF: ======================================
17-02-28 20:14:56.903 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:14:56.905 -08 000000106 INF: ======================================
17-02-28 20:14:56.916 -08 000000098 INF: Y Motor: Recv v 4097\r
17-02-28 20:14:56.916 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:14:56.916 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:56.981 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:56.981 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:56.981 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: Recv v 134217728\r
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:14:57.043 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:14:57.105 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:57.167 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.167 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:14:57.167 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:57.229 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.229 -08 000000098 INF: ======================================
17-02-28 20:14:57.230 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:57.231 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:14:57.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.232 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:14:57.289 -08 000000102 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:14:57.289 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:14:57.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:57.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:14:57.351 -08 000000044 INF: FPGA: Recv TDIYERD 1483213
17-02-28 20:14:57.351 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:14:57.417 -08 000000086 INF: FPGA: Recv ZADCR 32588
17-02-28 20:14:57.417 -08 000000018 INF: At scan end Y pos = 14.832 and Z pos = -0.125. Y moved -48.539 mm
17-02-28 20:14:57.417 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:14:57.476 -08 000000030 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:14:57.476 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:14:57.476 -08 000000018 INF: TDIScan finished after 11894.9776 ms
17-02-28 20:14:57.476 -08 000000018 INF: Image[0]: Y should trigger at 63.371 mm, 2nd row was at 64.280 mm (error = 0.909 mm)
17-02-28 20:14:57.476 -08 000000018 INF: Image[2]: Y should trigger at 63.371 mm, 2nd row was at 64.280 mm (error = 0.909 mm)
17-02-28 20:14:57.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.512 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.958 um
17-02-28 20:14:57.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.513 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:14:57.538 -08 000000057 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:14:57.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.539 -08 000000095 INF: ===================Dither Clean Up Command===================
17-02-28 20:14:57.539 -08 000000010 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:14:57.539 -08 000000044 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:14:57.540 -08 000000034 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:14:57.540 -08 000000034 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:14:57.540 -08 000000034 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:14:57.540 -08 000000044 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:14:57.540 -08 000000044 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:14:57.540 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:57.540 -08 000000010 INF: ======================================
17-02-28 20:14:57.540 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:57.541 -08 000000038 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:14:57.543 -08 000000037 INF: ===================LFT:Extracting coords===================
17-02-28 20:14:57.569 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:57.570 -08 000000037 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:14:57.571 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.571 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.571 -08 000000030 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.571 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.571 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:14:57.603 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:57.603 -08 000000053 INF: FPGA: Recv ZSEL 
17-02-28 20:14:57.603 -08 000000038 INF: FPGA: Xmit ZDACW 32896\n
17-02-28 20:14:57.604 -08 000000034 INF: ======================================
17-02-28 20:14:57.605 -08 000000044 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.605 -08 000000044 INF: ======================================
17-02-28 20:14:57.645 -08 000000087 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.645 -08 000000030 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.645 -08 000000051 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.645 -08 000000109 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:14:57.665 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:14:57.665 -08 000000038 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:14:57.666 -08 000000038 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:14:57.727 -08 000000101 INF: FPGA: Recv TDIBB
17-02-28 20:14:57.727 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:14:57.728 -08 000000038 INF: ======================================
17-02-28 20:14:57.796 -08 000000030 INF: LFT found best fwhm score 2.000031 in 151 ms
17-02-28 20:14:57.796 -08 000000030 INF: LFT found good score at index 7137 with fwhm value 2.000031. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.796 -08 000000087 INF: LFT found best fwhm score 2.000512 in 151 ms
17-02-28 20:14:57.796 -08 000000087 INF: LFT found good score at index 6553 with fwhm value 2.000512. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.797 -08 000000051 INF: LFT found best fwhm score 2.135241 in 151 ms
17-02-28 20:14:57.797 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.797 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.797 -08 000000051 INF: LFT found good score at index 4669 with fwhm value 2.135241. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.797 -08 000000030 INF: ======================================
17-02-28 20:14:57.797 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.797 -08 000000087 INF: ======================================
17-02-28 20:14:57.797 -08 000000051 INF: ======================================
17-02-28 20:14:57.797 -08 000000109 INF: LFT found best fwhm score 2.000039 in 151 ms
17-02-28 20:14:57.797 -08 000000109 INF: LFT found good score at index 561 with fwhm value 2.000039. Next cycle, cycle 4 starting Z position for top surface is at -0.128 mm FC:A, C:3,L:5,T
17-02-28 20:14:57.798 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:14:57.798 -08 000000109 INF: ======================================
17-02-28 20:14:57.798 -08 000000037 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:14:57.799 -08 000000037 INF: LFT weighted average best Z for top surface is at -0.128mm FC:A, C:3,L:5,T
17-02-28 20:14:57.800 -08 000000037 INF: ======================================
17-02-28 20:14:57.801 -08 000000095 INF: ======================================
17-02-28 20:14:57.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.803 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:14:57.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:57.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 16.64493 Y = 39.70011===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:14:57.805 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:14:57.828 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:14:57.828 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:14:57.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:14:57.829 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:57.829 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:14:57.829 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:14:57.829 -08 000000018 INF: Transformed XStagePosition from 17.75293 mm to 17.7632796876132 mm.
17-02-28 20:14:57.841 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4821813333556 mm.
17-02-28 20:14:57.841 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2821813333556 mm.
17-02-28 20:14:57.841 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3729313333556 mm.
17-02-28 20:14:57.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:14:57.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:14:57.844 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -125.5 um, section = E_1
17-02-28 20:14:57.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:57.864 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:14:57.866 -08 000000095 INF: ===================MoveEmissionFilters===================
17-02-28 20:14:57.866 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:57.867 -08 000000028 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:57.867 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:14:57.867 -08 000000050 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:14:57.868 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:57.897 -08 000000028 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:57.901 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:14:57.903 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:57.904 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:57.909 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:14:57.909 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:57.910 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":5,"Tile":1101,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF250","HCSMMF213","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:57.910 -08 000000037 INF: ======================================
17-02-28 20:14:57.912 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:14:57.912 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:14:57.913 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:14:57.914 -08 000000092 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:14:57.914 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:14:57.915 -08 000000092 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:14:57.915 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:14:57.915 -08 000000037 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:14:57.915 -08 000000092 INF: ======================================
17-02-28 20:14:57.915 -08 000000105 INF: ===================Move Y Motor without settling===================
17-02-28 20:14:57.916 -08 000000105 INF: Y Motor: Moving to 64.4822 mm @25.000 mm/sec, started at 14.8321 mm
17-02-28 20:14:57.916 -08 000000105 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:14:57.916 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:14:57.916 -08 000000037 INF: ======================================
17-02-28 20:14:57.928 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:57.928 -08 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:14:57.928 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:57.928 -08 000000083 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:14:57.929 -08 000000089 INF: ======================================
17-02-28 20:14:57.929 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:57.929 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:14:57.930 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:57.930 -08 000000083 INF: ======================================
17-02-28 20:14:57.930 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:57.930 -08 000000075 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:14:57.930 -08 000000028 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:14:57.931 -08 000000089 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:14:57.931 -08 000000064 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:14:57.931 -08 000000037 INF: ===================Camera Arm TDI===================
17-02-28 20:14:57.931 -08 000000089 INF: ======================================
17-02-28 20:14:57.931 -08 000000075 INF: ======================================
17-02-28 20:14:57.931 -08 000000083 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:14:57.932 -08 000000083 INF: ======================================
17-02-28 20:14:57.932 -08 000000037 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:57.933 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:14:57.933 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:14:57.933 -08 000000037 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:57.933 -08 000000028 INF: ======================================
17-02-28 20:14:57.933 -08 000000089 INF: ======================================
17-02-28 20:14:57.934 -08 000000051 INF: ======================================
17-02-28 20:14:57.935 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:14:57.936 -08 000000087 INF: ======================================
17-02-28 20:14:57.937 -08 000000095 INF: ======================================
17-02-28 20:14:57.966 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":5,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF270","HCSMMF236","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:57.977 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:14:57.979 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:57.979 -08 000000105 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:14:57.979 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:14:57.979 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:57.979 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:14:57.979 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:14:57.979 -08 000000064 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:14:58.039 -08 000000081 INF: FPGA: Recv TDIBB
17-02-28 20:14:58.040 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Moving to 17.7633 mm @15.000 mm/sec, started at 16.6611 mm
17-02-28 20:14:58.041 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:58.041 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:14:58.041 -08 000000066 INF: X Motor: Xmit MA -16891\n
17-02-28 20:14:58.041 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:14:58.042 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.043 -08 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:14:58.043 -08 000000064 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:14:58.044 -08 000000064 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:14:58.051 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":5,"Tile":1103,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF197","HCSMMF277","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.054 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":5,"Tile":1108,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF224","HCSMMF273","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.055 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":5,"Tile":1110,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF221","HCSMMF214","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.060 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":5,"Tile":1104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF286","HCSMMF178","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.060 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":5,"Tile":1109,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF187","HCSMMF184","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.061 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":5,"Tile":1113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF208","HCSMMF261","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.062 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":5,"Tile":1112,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF234","HCSMMF200","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.062 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":5,"Tile":1114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF284","HCSMMF204","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.063 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":5,"Tile":1122,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF206","HCSMMF180","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.064 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":5,"Tile":1105,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF271","HCSMMF217","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.065 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":5,"Tile":1124,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF220","HCSMMF186","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.065 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":5,"Tile":1115,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF211","HCSMMF194","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.066 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":5,"Tile":1116,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF192","HCSMMF227","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.067 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":5,"Tile":1102,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF188","HCSMMF205","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.068 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":5,"Tile":1118,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF229","HCSMMF244","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.068 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":5,"Tile":1121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF210","HCSMMF223","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.069 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":5,"Tile":1111,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF202","HCSMMF212","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.070 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":5,"Tile":1117,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF237","HCSMMF259","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.071 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":5,"Tile":1127,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF264","HCSMMF238","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.072 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":5,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF251","HCSMMF283","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.073 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":5,"Tile":1125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF260","HCSMMF222","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.073 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":5,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF228","HCSMMF246","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.074 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":5,"Tile":1120,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF225","HCSMMF276","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.075 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":5,"Tile":1119,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF196","HCSMMF235","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.076 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":5,"Tile":1123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF254","HCSMMF185","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.080 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":5,"Tile":1107,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF248","HCSMMF249","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:14:58.082 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.088 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:14:58.102 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:14:58.102 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:14:58.103 -08 000000066 INF: X Motor: Recv MA -16891\r\n>
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Set target position to 5948218 encoder counts
17-02-28 20:14:58.103 -08 000000105 INF: Y Motor: Xmit s r0xca 5948218\r
17-02-28 20:14:58.103 -08 000000066 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:14:58.104 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:14:58.104 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.106 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:14:58.106 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:14:58.106 -08 000000064 INF: Z Motor: Arming to move to -0.0855 mm
17-02-28 20:14:58.106 -08 000000064 INF: FPGA: Xmit ZYT 6428218 4\n
17-02-28 20:14:58.163 -08 000000053 INF: FPGA: Recv ZYT 
17-02-28 20:14:58.163 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483211 enc / 14.832 mm / ) = 6428218 enc / 64.282 mm
17-02-28 20:14:58.163 -08 000000064 INF: FPGA: Xmit ZARM 22410\n
17-02-28 20:14:58.165 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:58.165 -08 000000105 INF: Y Motor: Start the move command
17-02-28 20:14:58.165 -08 000000105 INF: Y Motor: Xmit t 1\r
17-02-28 20:14:58.185 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.185 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:14:58.224 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.225 -08 000000051 INF: FPGA: Recv ZARM
17-02-28 20:14:58.225 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9313 ms
17-02-28 20:14:58.225 -08 000000064 INF: Z Motor: ArmAbsStepped took 118.9558 ms
17-02-28 20:14:58.225 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:14:58.227 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:14:58.227 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:58.227 -08 000000105 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:14:58.227 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.228 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:14:58.229 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:58.230 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:14:58.230 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:14:58.230 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:14:58.232 -08 000000064 INF: ======================================
17-02-28 20:14:58.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:58.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:14:58.328 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.333 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:14:58.355 -08 000000105 INF: Y Motor: Unshifted Position: 1066044
17-02-28 20:14:58.405 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.431 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.436 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:14:58.524 -08 000000037 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:58.524 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:58.524 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:58.526 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.534 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:14:58.539 -08 000000037 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:58.541 -08 000000037 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:14:58.665 -08 000000105 INF: Y Motor: Unshifted Position: 1775708
17-02-28 20:14:58.715 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.727 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:14:58.789 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:14:58.789 -08 000000066 INF: X Motor: Moved to 17.7622 after 685 ms
17-02-28 20:14:58.789 -08 000000066 INF: ======================================
17-02-28 20:14:58.821 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:14:58.839 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:58.979 -08 000000105 INF: Y Motor: Unshifted Position: 2555730
17-02-28 20:14:59.029 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.135 -08 000000037 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:14:59.135 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:14:59.135 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:14:59.150 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.150 -08 000000037 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:14:59.152 -08 000000037 INF: ===================Camera Arm TDI===================
17-02-28 20:14:59.153 -08 000000037 INF: ======================================
17-02-28 20:14:59.154 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:14:59.156 -08 000000050 INF: ======================================
17-02-28 20:14:59.289 -08 000000105 INF: Y Motor: Unshifted Position: 3335672
17-02-28 20:14:59.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:14:59.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:14:59.339 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.463 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.603 -08 000000105 INF: Y Motor: Unshifted Position: 4111580
17-02-28 20:14:59.653 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.775 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:14:59.912 -08 000000105 INF: Y Motor: Unshifted Position: 4894015
17-02-28 20:14:59.962 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.087 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.225 -08 000000105 INF: Y Motor: Unshifted Position: 5675779
17-02-28 20:15:00.275 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:00.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:00.294 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:15:00.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:00.393 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:00.399 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:00.474 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:15:00.474 -08 000000042 INF: Current Position of Pump is: 9600
17-02-28 20:15:00.539 -08 000000105 INF: Y Motor: Unshifted Position: 5948220
17-02-28 20:15:00.539 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:00.539 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:00.574 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:00.598 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:15:00.598 -08 000000105 INF: Y Motor: Moved to 64.4822 after 2371 ms
17-02-28 20:15:00.598 -08 000000105 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:00.660 -08 000000105 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:00.660 -08 000000105 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:00.660 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:00.661 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:15:00.661 -08 000000042 INF: Current Position of Pump is: 9600
17-02-28 20:15:00.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:15:00.725 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:15:00.725 -08 000000105 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:00.725 -08 000000105 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:00.761 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD9600R\r
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:00.785 -08 000000105 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:00.846 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:00.847 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:00.914 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:15:00.914 -08 000000105 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:00.914 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:00.946 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:00.975 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:15:00.975 -08 000000105 INF: ======================================
17-02-28 20:15:00.976 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:15:00.977 -08 000000038 INF: ======================================
17-02-28 20:15:00.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:00.980 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:00.980 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:00.980 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:01.035 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.036 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.036 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:01.096 -08 000000062 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:01.096 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:01.097 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:01.097 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:01.158 -08 000000098 INF: FPGA: Recv TDIYERD 6448220
17-02-28 20:15:01.158 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448220 counts (64.482 mm)
17-02-28 20:15:01.159 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:01.159 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:01.160 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:01.160 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:01.161 -08 000000064 INF: ======================================
17-02-28 20:15:01.161 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:01.161 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:01.162 -08 000000039 INF: FPGA: Xmit TDIYPOS 6337293\n
17-02-28 20:15:01.220 -08 000000108 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:01.221 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:01.222 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:01.222 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6428218 1 1\n
17-02-28 20:15:01.284 -08 000000076 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:01.285 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:01.285 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:01.286 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:01.287 -08 000000039 INF: ======================================
17-02-28 20:15:01.288 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:01.289 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:01.289 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.290 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.290 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.291 -08 000000062 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:01.291 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:01.291 -08 000000062 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:01.291 -08 000000062 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:01.291 -08 000000062 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:01.291 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:01.291 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:01.291 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:01.291 -08 000000062 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:01.292 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:01.350 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.600 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:01.657 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:15:01.657 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:15:01.657 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 365.9486 ms
17-02-28 20:15:01.657 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.1441 ms
17-02-28 20:15:01.657 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.2771 ms
17-02-28 20:15:01.658 -08 000000062 INF: Excitation Filter 2: Moved -107 steps in 366.1163 ms
17-02-28 20:15:01.658 -08 000000062 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.5801 ms
17-02-28 20:15:01.658 -08 000000062 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.6543 ms
17-02-28 20:15:01.658 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.658 -08 000000062 INF: ======================================
17-02-28 20:15:01.658 -08 000000050 INF: ======================================
17-02-28 20:15:01.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.660 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:01.661 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:15:01.661 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:01.662 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:15:01.662 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:01.662 -08 000000010 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:01.662 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:01.662 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:01.662 -08 000000051 INF: Y Motor: Moving to 14.8338 mm @6.500 mm/sec, started at 64.4822 mm
17-02-28 20:15:01.663 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:01.663 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:01.663 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:01.663 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:01.663 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:15:01.666 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.666 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.666 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.666 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.721 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.721 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:01.721 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:01.786 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.786 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:01.816 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.816 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.817 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.817 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Set target position to 983384 encoder counts
17-02-28 20:15:01.850 -08 000000051 INF: Y Motor: Xmit s r0xca 983384\r
17-02-28 20:15:01.908 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.908 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:01.908 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:15:01.908 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:01.966 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.966 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.967 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:01.967 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:01.972 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:01.973 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:01.973 -08 000000051 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:01.973 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.033 -08 000000102 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:02.033 -08 000000064 INF: ======================================
17-02-28 20:15:02.097 -08 000000051 INF: Y Motor: Unshifted Position: 5884627
17-02-28 20:15:02.116 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:02.116 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:02.116 -08 000000047 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:02.117 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:02.117 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:02.117 -08 000000068 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:02.147 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.222 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:02.271 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.282 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:02.282 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:02.282 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:02.282 -08 000000047 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:02.289 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:02.289 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:02.289 -08 000000068 INF: ===================Camera #0 Frame #11===================
17-02-28 20:15:02.407 -08 000000051 INF: Y Motor: Unshifted Position: 5682916
17-02-28 20:15:02.457 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.460 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:02.460 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:02.460 -08 000000047 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:02.465 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:02.465 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:02.465 -08 000000068 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:02.532 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:02.584 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.595 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:02.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:02.595 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:15:02.638 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:02.638 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:02.638 -08 000000047 INF: ===================Camera #2 Frame #24===================
17-02-28 20:15:02.641 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:02.641 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:02.641 -08 000000068 INF: ===================Camera #0 Frame #24===================
17-02-28 20:15:02.720 -08 000000051 INF: Y Motor: Unshifted Position: 5479470
17-02-28 20:15:02.770 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.810 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:02.810 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:02.810 -08 000000047 INF: ===================Camera #2 Frame #30===================
17-02-28 20:15:02.813 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:02.813 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:02.813 -08 000000068 INF: ===================Camera #0 Frame #30===================
17-02-28 20:15:02.894 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:02.988 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:02.988 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:02.988 -08 000000047 INF: ===================Camera #2 Frame #37===================
17-02-28 20:15:02.989 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:02.989 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:02.989 -08 000000068 INF: ===================Camera #0 Frame #37===================
17-02-28 20:15:03.033 -08 000000051 INF: Y Motor: Unshifted Position: 5275799
17-02-28 20:15:03.083 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.169 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:15:03.169 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:15:03.169 -08 000000068 INF: ===================Camera #0 Frame #43===================
17-02-28 20:15:03.171 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:15:03.171 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:15:03.171 -08 000000047 INF: ===================Camera #2 Frame #43===================
17-02-28 20:15:03.207 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.343 -08 000000051 INF: Y Motor: Unshifted Position: 5074301
17-02-28 20:15:03.343 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:03.343 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:03.343 -08 000000068 INF: ===================Camera #0 Frame #50===================
17-02-28 20:15:03.348 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:03.348 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:03.348 -08 000000047 INF: ===================Camera #2 Frame #50===================
17-02-28 20:15:03.393 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.515 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:15:03.515 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:15:03.515 -08 000000068 INF: ===================Camera #0 Frame #56===================
17-02-28 20:15:03.520 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.522 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:15:03.522 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:15:03.522 -08 000000047 INF: ===================Camera #2 Frame #56===================
17-02-28 20:15:03.656 -08 000000051 INF: Y Motor: Unshifted Position: 4870633
17-02-28 20:15:03.690 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:03.690 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:03.690 -08 000000068 INF: ===================Camera #0 Frame #63===================
17-02-28 20:15:03.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:15:03.702 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:03.702 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:03.702 -08 000000047 INF: ===================Camera #2 Frame #63===================
17-02-28 20:15:03.706 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.779 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:03.830 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:03.871 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:15:03.871 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:15:03.871 -08 000000068 INF: ===================Camera #0 Frame #69===================
17-02-28 20:15:03.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:03.885 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:15:03.885 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:15:03.885 -08 000000047 INF: ===================Camera #2 Frame #70===================
17-02-28 20:15:03.968 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:03.969 -08 000000051 INF: Y Motor: Unshifted Position: 4667187
17-02-28 20:15:04.019 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.048 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:15:04.048 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:15:04.048 -08 000000068 INF: ===================Camera #0 Frame #76===================
17-02-28 20:15:04.065 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:15:04.065 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:15:04.065 -08 000000047 INF: ===================Camera #2 Frame #76===================
17-02-28 20:15:04.143 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.218 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:04.221 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:15:04.221 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:15:04.221 -08 000000068 INF: ===================Camera #0 Frame #82===================
17-02-28 20:15:04.234 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:15:04.234 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:15:04.234 -08 000000047 INF: ===================Camera #2 Frame #83===================
17-02-28 20:15:04.278 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:04.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:15:04.279 -08 000000051 INF: Y Motor: Unshifted Position: 4465454
17-02-28 20:15:04.329 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.389 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:15:04.389 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:15:04.389 -08 000000068 INF: ===================Camera #0 Frame #88===================
17-02-28 20:15:04.407 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:15:04.407 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:15:04.407 -08 000000047 INF: ===================Camera #2 Frame #89===================
17-02-28 20:15:04.456 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.557 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:15:04.557 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:15:04.557 -08 000000068 INF: ===================Camera #0 Frame #94===================
17-02-28 20:15:04.576 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:15:04.576 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:15:04.576 -08 000000047 INF: ===================Camera #2 Frame #95===================
17-02-28 20:15:04.592 -08 000000051 INF: Y Motor: Unshifted Position: 4262011
17-02-28 20:15:04.642 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.726 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:15:04.726 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:15:04.726 -08 000000068 INF: ===================Camera #0 Frame #101===================
17-02-28 20:15:04.745 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:15:04.745 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:15:04.745 -08 000000047 INF: ===================Camera #2 Frame #101===================
17-02-28 20:15:04.766 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:04.774 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.775 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.775 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:04.775 -08 000000042 INF: WaitCommand(40000) start
17-02-28 20:15:04.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-02-28 20:15:04.898 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:15:04.898 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:15:04.898 -08 000000068 INF: ===================Camera #0 Frame #107===================
17-02-28 20:15:04.907 -08 000000051 INF: Y Motor: Unshifted Position: 4057687
17-02-28 20:15:04.915 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:15:04.915 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:15:04.915 -08 000000047 INF: ===================Camera #2 Frame #108===================
17-02-28 20:15:04.957 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.067 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:15:05.067 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:15:05.067 -08 000000068 INF: ===================Camera #0 Frame #113===================
17-02-28 20:15:05.079 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.088 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:15:05.088 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:15:05.088 -08 000000047 INF: ===================Camera #2 Frame #114===================
17-02-28 20:15:05.215 -08 000000051 INF: Y Motor: Unshifted Position: 3855535
17-02-28 20:15:05.235 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:15:05.235 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:15:05.235 -08 000000068 INF: ===================Camera #0 Frame #119===================
17-02-28 20:15:05.257 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:15:05.257 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:15:05.257 -08 000000047 INF: ===================Camera #2 Frame #120===================
17-02-28 20:15:05.265 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.394 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.403 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:15:05.403 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:15:05.403 -08 000000068 INF: ===================Camera #0 Frame #126===================
17-02-28 20:15:05.426 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:15:05.426 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:15:05.426 -08 000000047 INF: ===================Camera #2 Frame #126===================
17-02-28 20:15:05.530 -08 000000051 INF: Y Motor: Unshifted Position: 3652518
17-02-28 20:15:05.575 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:15:05.575 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:15:05.575 -08 000000068 INF: ===================Camera #0 Frame #132===================
17-02-28 20:15:05.580 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.596 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:15:05.596 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:15:05.596 -08 000000047 INF: ===================Camera #2 Frame #133===================
17-02-28 20:15:05.702 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.743 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:15:05.743 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:15:05.743 -08 000000068 INF: ===================Camera #0 Frame #138===================
17-02-28 20:15:05.768 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:15:05.768 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:15:05.768 -08 000000047 INF: ===================Camera #2 Frame #139===================
17-02-28 20:15:05.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:05.776 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-02-28 20:15:05.839 -08 000000051 INF: Y Motor: Unshifted Position: 3449712
17-02-28 20:15:05.889 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:05.911 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:15:05.911 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:15:05.911 -08 000000068 INF: ===================Camera #0 Frame #144===================
17-02-28 20:15:05.937 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:15:05.937 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:15:05.937 -08 000000047 INF: ===================Camera #2 Frame #145===================
17-02-28 20:15:06.018 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.079 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:15:06.079 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:15:06.079 -08 000000068 INF: ===================Camera #0 Frame #151===================
17-02-28 20:15:06.106 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:15:06.106 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:15:06.106 -08 000000047 INF: ===================Camera #2 Frame #152===================
17-02-28 20:15:06.152 -08 000000051 INF: Y Motor: Unshifted Position: 3247353
17-02-28 20:15:06.202 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.251 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:15:06.251 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:15:06.251 -08 000000068 INF: ===================Camera #0 Frame #157===================
17-02-28 20:15:06.279 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:15:06.279 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:15:06.279 -08 000000047 INF: ===================Camera #2 Frame #158===================
17-02-28 20:15:06.327 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.419 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:15:06.419 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:15:06.419 -08 000000068 INF: ===================Camera #0 Frame #163===================
17-02-28 20:15:06.448 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:15:06.448 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:15:06.448 -08 000000047 INF: ===================Camera #2 Frame #164===================
17-02-28 20:15:06.467 -08 000000051 INF: Y Motor: Unshifted Position: 3043910
17-02-28 20:15:06.517 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.587 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:15:06.587 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:15:06.587 -08 000000068 INF: ===================Camera #0 Frame #169===================
17-02-28 20:15:06.617 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:15:06.617 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:15:06.617 -08 000000047 INF: ===================Camera #2 Frame #170===================
17-02-28 20:15:06.640 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.755 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:15:06.755 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:15:06.755 -08 000000068 INF: ===================Camera #0 Frame #175===================
17-02-28 20:15:06.776 -08 000000051 INF: Y Motor: Unshifted Position: 2842196
17-02-28 20:15:06.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:06.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:15:06.786 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:15:06.786 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:15:06.786 -08 000000047 INF: ===================Camera #2 Frame #177===================
17-02-28 20:15:06.826 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.923 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:15:06.923 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:15:06.923 -08 000000068 INF: ===================Camera #0 Frame #182===================
17-02-28 20:15:06.953 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:06.958 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:15:06.958 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:15:06.958 -08 000000047 INF: ===================Camera #2 Frame #183===================
17-02-28 20:15:07.090 -08 000000051 INF: Y Motor: Unshifted Position: 2638091
17-02-28 20:15:07.094 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:15:07.094 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:15:07.094 -08 000000068 INF: ===================Camera #0 Frame #188===================
17-02-28 20:15:07.127 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:15:07.127 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:15:07.127 -08 000000047 INF: ===================Camera #2 Frame #189===================
17-02-28 20:15:07.140 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.262 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:15:07.262 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:15:07.262 -08 000000068 INF: ===================Camera #0 Frame #194===================
17-02-28 20:15:07.264 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.296 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:15:07.296 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:15:07.296 -08 000000047 INF: ===================Camera #2 Frame #195===================
17-02-28 20:15:07.403 -08 000000051 INF: Y Motor: Unshifted Position: 2436389
17-02-28 20:15:07.430 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:15:07.430 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:15:07.430 -08 000000068 INF: ===================Camera #0 Frame #200===================
17-02-28 20:15:07.453 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.465 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:15:07.465 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:15:07.465 -08 000000047 INF: ===================Camera #2 Frame #202===================
17-02-28 20:15:07.577 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.598 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:15:07.598 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:15:07.598 -08 000000068 INF: ===================Camera #0 Frame #206===================
17-02-28 20:15:07.637 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:15:07.637 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:15:07.637 -08 000000047 INF: ===================Camera #2 Frame #208===================
17-02-28 20:15:07.714 -08 000000051 INF: Y Motor: Unshifted Position: 2232935
17-02-28 20:15:07.764 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.766 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:15:07.766 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:15:07.766 -08 000000068 INF: ===================Camera #0 Frame #213===================
17-02-28 20:15:07.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:07.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left===================
17-02-28 20:15:07.806 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:15:07.806 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:15:07.806 -08 000000047 INF: ===================Camera #2 Frame #214===================
17-02-28 20:15:07.887 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:07.937 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:15:07.937 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:15:07.937 -08 000000068 INF: ===================Camera #0 Frame #219===================
17-02-28 20:15:07.975 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:15:07.975 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:15:07.975 -08 000000047 INF: ===================Camera #2 Frame #220===================
17-02-28 20:15:08.026 -08 000000051 INF: Y Motor: Unshifted Position: 2029267
17-02-28 20:15:08.076 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.105 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:15:08.105 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:15:08.105 -08 000000068 INF: ===================Camera #0 Frame #225===================
17-02-28 20:15:08.144 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:15:08.144 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:15:08.144 -08 000000047 INF: ===================Camera #2 Frame #227===================
17-02-28 20:15:08.200 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.273 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:15:08.273 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:15:08.273 -08 000000068 INF: ===================Camera #0 Frame #231===================
17-02-28 20:15:08.316 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:15:08.316 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:15:08.316 -08 000000047 INF: ===================Camera #2 Frame #233===================
17-02-28 20:15:08.336 -08 000000051 INF: Y Motor: Unshifted Position: 1827759
17-02-28 20:15:08.386 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.441 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:15:08.441 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:15:08.441 -08 000000068 INF: ===================Camera #0 Frame #237===================
17-02-28 20:15:08.485 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:15:08.485 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:15:08.485 -08 000000047 INF: ===================Camera #2 Frame #239===================
17-02-28 20:15:08.513 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.609 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:15:08.609 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:15:08.609 -08 000000068 INF: ===================Camera #0 Frame #244===================
17-02-28 20:15:08.649 -08 000000051 INF: Y Motor: Unshifted Position: 1624100
17-02-28 20:15:08.654 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:15:08.654 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:15:08.654 -08 000000047 INF: ===================Camera #2 Frame #245===================
17-02-28 20:15:08.699 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:08.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left===================
17-02-28 20:15:08.780 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:15:08.780 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:15:08.780 -08 000000068 INF: ===================Camera #0 Frame #250===================
17-02-28 20:15:08.823 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:08.823 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:15:08.823 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:15:08.823 -08 000000047 INF: ===================Camera #2 Frame #252===================
17-02-28 20:15:08.948 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:15:08.948 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:15:08.948 -08 000000068 INF: ===================Camera #0 Frame #256===================
17-02-28 20:15:08.962 -08 000000051 INF: Y Motor: Unshifted Position: 1420642
17-02-28 20:15:08.995 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:15:08.995 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:15:08.995 -08 000000047 INF: ===================Camera #2 Frame #258===================
17-02-28 20:15:09.012 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.117 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:15:09.117 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:15:09.117 -08 000000068 INF: ===================Camera #0 Frame #262===================
17-02-28 20:15:09.136 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.165 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:15:09.165 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:15:09.165 -08 000000047 INF: ===================Camera #2 Frame #264===================
17-02-28 20:15:09.272 -08 000000051 INF: Y Motor: Unshifted Position: 1218922
17-02-28 20:15:09.287 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:15:09.287 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:15:09.287 -08 000000068 INF: ===================Camera #0 Frame #269===================
17-02-28 20:15:09.322 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.336 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:15:09.336 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:15:09.336 -08 000000047 INF: ===================Camera #2 Frame #270===================
17-02-28 20:15:09.400 -08 000000102 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:09.401 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:09.402 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:09.403 -08 000000052 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:09.404 -08 000000034 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:09.404 -08 000000052 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:09.404 -08 000000052 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:09.404 -08 000000052 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:09.404 -08 000000034 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:09.404 -08 000000034 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:09.404 -08 000000034 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:09.404 -08 000000052 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:09.405 -08 000000034 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:09.450 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.460 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:09.460 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:09.460 -08 000000068 INF: ===================Camera #0 Frame #272===================
17-02-28 20:15:09.470 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:09.471 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:09.586 -08 000000051 INF: Y Motor: Unshifted Position: 1014606
17-02-28 20:15:09.600 -08 000000068 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:09.600 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:09.600 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:09.600 -08 000000047 INF: ===================Camera #2 Frame #272===================
17-02-28 20:15:09.600 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:09.606 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:09.607 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:09.630 -08 000000068 INF: ======================================
17-02-28 20:15:09.636 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:09.772 -08 000000051 INF: Y Motor: Unshifted Position: 983383
17-02-28 20:15:09.772 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:09.772 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:09.777 -08 000000047 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:09.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:09.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left===================
17-02-28 20:15:09.777 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:15:09.813 -08 000000047 INF: ======================================
17-02-28 20:15:09.815 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:15:09.816 -08 000000010 INF: ======================================
17-02-28 20:15:09.832 -08 000000075 INF: FPGA: Recv EX1MV
17-02-28 20:15:09.832 -08 000000075 INF: FPGA: Recv EX2MV
17-02-28 20:15:09.832 -08 000000034 INF: Excitation Filter 2: Moved 107 steps in 427.9857 ms
17-02-28 20:15:09.832 -08 000000052 INF: Excitation Filter 1: Moved 107 steps in 428.156 ms
17-02-28 20:15:09.832 -08 000000052 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 428.2822 ms
17-02-28 20:15:09.832 -08 000000034 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 428.091 ms
17-02-28 20:15:09.832 -08 000000034 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 428.3001 ms
17-02-28 20:15:09.832 -08 000000052 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 428.3525 ms
17-02-28 20:15:09.832 -08 000000034 INF: ======================================
17-02-28 20:15:09.832 -08 000000052 INF: ======================================
17-02-28 20:15:09.834 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:09.834 -08 000000051 INF: Y Motor: Moved to 14.8338 after 7860 ms
17-02-28 20:15:09.834 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:09.834 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:09.835 -08 000000038 INF: ======================================
17-02-28 20:15:09.898 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:09.898 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:09.898 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:09.958 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:09.958 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:09.958 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:10.024 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:10.110 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:10.163 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.163 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:10.163 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:10.225 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.226 -08 000000051 INF: ======================================
17-02-28 20:15:10.227 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:10.228 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:10.229 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.229 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:10.286 -08 000000058 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:10.286 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:10.347 -08 000000069 INF: FPGA: Recv TDIYERD 1483385
17-02-28 20:15:10.347 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:10.410 -08 000000087 INF: FPGA: Recv ZADCR 32938
17-02-28 20:15:10.410 -08 000000018 INF: At scan end Y pos = 14.834 and Z pos = -0.126. Y moved -48.539 mm
17-02-28 20:15:10.410 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:10.471 -08 000000089 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:15:10.471 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:15:10.471 -08 000000018 INF: TDIScan finished after 12641.3456 ms
17-02-28 20:15:10.471 -08 000000018 INF: Image[0]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:15:10.471 -08 000000018 INF: Image[2]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:15:10.473 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.508 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.886 um
17-02-28 20:15:10.508 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.509 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:10.536 -08 000000087 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:10.537 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.537 -08 000000104 INF: ===================Dither Clean Up Command===================
17-02-28 20:15:10.537 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:10.538 -08 000000098 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:10.538 -08 000000051 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:10.538 -08 000000051 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:10.538 -08 000000039 INF: ======================================
17-02-28 20:15:10.538 -08 000000051 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:10.538 -08 000000098 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:10.538 -08 000000098 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:10.538 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:10.538 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:10.541 -08 000000045 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:15:10.541 -08 000000100 INF: ===================LFT:Extracting coords===================
17-02-28 20:15:10.567 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:10.567 -08 000000100 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:15:10.568 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.568 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.569 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.569 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.569 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:10.598 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:10.598 -08 000000030 INF: FPGA: Recv ZSEL 
17-02-28 20:15:10.598 -08 000000045 INF: FPGA: Xmit ZDACW 32896\n
17-02-28 20:15:10.598 -08 000000098 INF: ======================================
17-02-28 20:15:10.601 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.601 -08 000000051 INF: ======================================
17-02-28 20:15:10.643 -08 000000064 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.643 -08 000000034 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.643 -08 000000089 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.643 -08 000000052 INF: FC:A, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:10.660 -08 000000092 INF: FPGA: Recv ZDACW 
17-02-28 20:15:10.661 -08 000000045 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:15:10.661 -08 000000045 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:15:10.722 -08 000000039 INF: FPGA: Recv TDIBB
17-02-28 20:15:10.722 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:10.723 -08 000000045 INF: ======================================
17-02-28 20:15:10.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:10.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:15:10.794 -08 000000064 INF: LFT found best fwhm score 2.000005 in 151 ms
17-02-28 20:15:10.794 -08 000000064 INF: LFT found good score at index 4301 with fwhm value 2.000005. Next cycle, cycle 4 starting Z position for top surface is at -0.129 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.794 -08 000000089 INF: LFT found best fwhm score 2.000264 in 151 ms
17-02-28 20:15:10.794 -08 000000089 INF: LFT found good score at index 6637 with fwhm value 2.000264. Next cycle, cycle 4 starting Z position for top surface is at -0.130 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.794 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.794 -08 000000034 INF: LFT found best fwhm score 2.000215 in 151 ms
17-02-28 20:15:10.794 -08 000000034 INF: LFT found good score at index 4261 with fwhm value 2.000215. Next cycle, cycle 4 starting Z position for top surface is at -0.129 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.794 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.794 -08 000000052 INF: LFT found best fwhm score 2.18987 in 151 ms
17-02-28 20:15:10.795 -08 000000052 INF: LFT found good score at index 4553 with fwhm value 2.18987. Next cycle, cycle 4 starting Z position for top surface is at -0.129 mm FC:A, C:3,L:5,T
17-02-28 20:15:10.795 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.795 -08 000000064 INF: ======================================
17-02-28 20:15:10.795 -08 000000089 INF: ======================================
17-02-28 20:15:10.795 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:10.795 -08 000000034 INF: ======================================
17-02-28 20:15:10.795 -08 000000052 INF: ======================================
17-02-28 20:15:10.796 -08 000000100 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:10.797 -08 000000100 INF: LFT weighted average best Z for top surface is at -0.129mm FC:A, C:3,L:5,T
17-02-28 20:15:10.797 -08 000000100 INF: ======================================
17-02-28 20:15:10.798 -08 000000104 INF: ======================================
17-02-28 20:15:10.799 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:10.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:10.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:15:10.802 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 17.75293 Y = 39.70011===================
17-02-28 20:15:10.803 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:15:10.803 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:15:10.826 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:15:10.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:15:10.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:15:10.826 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:10.827 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:15:10.827 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:15:10.827 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:15:10.898 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":5,"Tile":1203,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF255","HCSMMF276","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:10.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:10.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:10.920 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:10.920 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:10.975 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:10.976 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:10.976 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:15:10.976 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:15:11.075 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":5,"Tile":1205,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF201","HCSMMF220","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.078 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":5,"Tile":1208,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF190","HCSMMF208","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.105 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":5,"Tile":1206,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF238","HCSMMF221","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.107 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":5,"Tile":1210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF256","HCSMMF284","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.108 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":5,"Tile":1201,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF183","HCSMMF248","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.109 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":5,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF247","HCSMMF207","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.110 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":5,"Tile":1204,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF191","HCSMMF186","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.112 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":5,"Tile":1212,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF217","HCSMMF275","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.113 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":5,"Tile":1215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF229","HCSMMF218","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.113 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":5,"Tile":1207,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF199","HCSMMF204","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.114 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":5,"Tile":1209,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF272","HCSMMF278","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.115 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":5,"Tile":1202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF196","HCSMMF249","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.116 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":5,"Tile":1216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF197","HCSMMF277","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.117 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":5,"Tile":1213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF258","HCSMMF195","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.118 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":5,"Tile":1217,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF244","HCSMMF270","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.119 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":5,"Tile":1221,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF227","HCSMMF219","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.120 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":5,"Tile":1225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF262","HCSMMF215","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.121 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":5,"Tile":1220,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF193","HCSMMF187","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.122 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":5,"Tile":1224,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF240","HCSMMF274","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.123 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":5,"Tile":1211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF265","HCSMMF285","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.124 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":5,"Tile":1228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF241","HCSMMF213","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.125 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":5,"Tile":1226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF178","HCSMMF242","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.126 -08 000000092 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":5,"Tile":1219,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF181","HCSMMF257","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.127 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":5,"Tile":1218,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF177","HCSMMF266","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.128 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":5,"Tile":1223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF192","HCSMMF253","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.129 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":5,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF184","HCSMMF237","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.131 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":5,"Tile":1227,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF252","HCSMMF203","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:11.134 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.140 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:15:11.212 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.212 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:15:11.249 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.255 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:15:11.342 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.348 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:15:11.376 -08 000000076 INF: FPGA: Recv MIOCOMPR
17-02-28 20:15:11.376 -08 000000018 INF: Compensator: Moved OutOfPath in 400 ms
17-02-28 20:15:11.376 -08 000000018 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:11.377 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.378 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.379 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:11.379 -08 000000037 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:11.379 -08 000000104 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:11.379 -08 000000058 INF: ======================================
17-02-28 20:15:11.379 -08 000000104 INF: ======================================
17-02-28 20:15:11.379 -08 000000037 INF: ======================================
17-02-28 20:15:11.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.381 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:11.388 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:15:11.396 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:15:11.396 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:11.396 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:11.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.400 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:15:11.400 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:15:11.400 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:15:11.438 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:11.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.439 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:11.439 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1255 mm
17-02-28 20:15:11.439 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:11.504 -08 000000010 INF: FPGA: Recv ZTRG 
17-02-28 20:15:11.504 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:11.515 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.521 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:15:11.563 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:15:11.563 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:11.563 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:15:11.628 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:11.628 -08 000000045 INF: FPGA: Recv ZMV 
17-02-28 20:15:11.628 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:11.628 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.0582 ms
17-02-28 20:15:11.628 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:11.690 -08 000000029 INF: FPGA: Recv ZDACR 60292
17-02-28 20:15:11.690 -08 000000018 INF: Z Motor: MoveAndTrigger took 251.3404 ms w/comms
17-02-28 20:15:11.690 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:11.690 -08 000000018 INF: Z Motor: MoveAbsStepped took 251.5236 ms
17-02-28 20:15:11.691 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.691 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.700 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:15:11.700 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:15:11.718 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:11.752 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:11.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:11.763 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:15:11.772 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:11.772 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.772 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:11.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:11.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:11.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:11.775 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:15:11.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:11.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:11.776 -08 000000050 INF: ===================Move X,Y===================
17-02-28 20:15:11.776 -08 000000089 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:11.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:11.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left===================
17-02-28 20:15:11.777 -08 000000050 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:11.777 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:11.777 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:11.777 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:11.777 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:11.778 -08 000000057 INF: ===================Move X Motor without settling===================
17-02-28 20:15:11.778 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:11.778 -08 000000057 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:11.778 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000109 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8338 mm
17-02-28 20:15:11.778 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:11.778 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:11.779 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:11.779 -08 000000098 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:11.779 -08 000000051 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:11.779 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:11.779 -08 000000076 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:11.779 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:11.779 -08 000000108 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:11.779 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:11.780 -08 000000074 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:11.780 -08 000000076 INF: ======================================
17-02-28 20:15:11.780 -08 000000064 INF: ======================================
17-02-28 20:15:11.781 -08 000000108 INF: ======================================
17-02-28 20:15:11.782 -08 000000051 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:11.782 -08 000000098 INF: ======================================
17-02-28 20:15:11.782 -08 000000010 INF: ======================================
17-02-28 20:15:11.783 -08 000000051 INF: ======================================
17-02-28 20:15:11.783 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:11.783 -08 000000074 INF: ======================================
17-02-28 20:15:11.783 -08 000000066 INF: ======================================
17-02-28 20:15:11.784 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:11.784 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:11.784 -08 000000087 INF: ======================================
17-02-28 20:15:11.785 -08 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:11.785 -08 000000039 INF: ======================================
17-02-28 20:15:11.785 -08 000000081 INF: ======================================
17-02-28 20:15:11.786 -08 000000055 INF: ======================================
17-02-28 20:15:11.786 -08 000000089 INF: ======================================
17-02-28 20:15:11.816 -08 000000057 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:11.816 -08 000000057 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:11.816 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:11.816 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:11.816 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:11.878 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:11.878 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Moving to 19.9639 mm @15.000 mm/sec, started at 17.7622 mm
17-02-28 20:15:11.880 -08 000000057 INF: X Motor: Xmit MA -15989\n
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:15:11.942 -08 000000109 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:15:11.943 -08 000000057 INF: X Motor: Recv MA -15989\r\n>
17-02-28 20:15:11.943 -08 000000057 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:15:12.005 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:12.005 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:15:12.005 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:12.013 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:15:12.066 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:12.066 -08 000000109 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:15:12.066 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.190 -08 000000109 INF: Y Motor: Unshifted Position: 1074031
17-02-28 20:15:12.240 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.366 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.503 -08 000000109 INF: Y Motor: Unshifted Position: 1772563
17-02-28 20:15:12.553 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.563 -08 000000057 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:12.628 -08 000000057 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:12.628 -08 000000057 INF: X Motor: Moved to 19.9644 after 685 ms
17-02-28 20:15:12.628 -08 000000057 INF: ======================================
17-02-28 20:15:12.678 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:12.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left===================
17-02-28 20:15:12.814 -08 000000109 INF: Y Motor: Unshifted Position: 2548400
17-02-28 20:15:12.864 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:12.988 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.125 -08 000000109 INF: Y Motor: Unshifted Position: 3335845
17-02-28 20:15:13.175 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.302 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.438 -08 000000109 INF: Y Motor: Unshifted Position: 4109258
17-02-28 20:15:13.488 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.612 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.757 -08 000000109 INF: Y Motor: Unshifted Position: 4894189
17-02-28 20:15:13.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:13.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left===================
17-02-28 20:15:13.807 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:13.925 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:14.062 -08 000000109 INF: Y Motor: Unshifted Position: 5666497
17-02-28 20:15:14.112 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:14.238 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:14.373 -08 000000109 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:15:14.373 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:14.373 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:14.435 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:14.435 -08 000000109 INF: Y Motor: Moved to 64.4706 after 2369 ms
17-02-28 20:15:14.435 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:14.500 -08 000000109 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:14.500 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:14.500 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:14.562 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:14.562 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:14.562 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:14.624 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:14.686 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:14.748 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:14.748 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:14.748 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:14.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:14.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 seconds left===================
17-02-28 20:15:14.810 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:15:14.810 -08 000000109 INF: ======================================
17-02-28 20:15:14.812 -08 000000050 INF: ===================Move X,Y===================
17-02-28 20:15:14.813 -08 000000050 INF: ======================================
17-02-28 20:15:14.814 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:14.815 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:14.816 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:15:14.816 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:15:14.872 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:14.872 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:15:14.936 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:14.936 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:14.937 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:14.937 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:14.999 -08 000000092 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:15:14.999 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:15:14.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:15.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:15.001 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:15.001 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.001 -08 000000058 INF: ======================================
17-02-28 20:15:15.002 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:15.003 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.005 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:15.006 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:15.006 -08 000000053 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:15:15.057 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:15.057 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:15.060 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:15.060 -08 000000053 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:15:15.122 -08 000000038 INF: FPGA: Recv TDIYARM2
17-02-28 20:15:15.123 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:15.125 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.127 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:15.127 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.130 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:15.130 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:15.131 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:15.500 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:15.500 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:15.500 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:15.515 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:15.518 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:15.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:15.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 29 of 40 seconds left===================
17-02-28 20:15:15.904 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:15.904 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:15.904 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:15.920 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:15.922 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:15.923 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:15.926 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:15.927 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:15.927 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:15.930 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:15.930 -08 000000053 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:15.930 -08 000000053 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:15:15.930 -08 000000053 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:15:15.993 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:15:15.993 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:15:15.993 -08 000000053 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:15:16.059 -08 000000051 INF: FPGA: Recv ZARM
17-02-28 20:15:16.059 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.714 ms
17-02-28 20:15:16.059 -08 000000053 INF: Z Motor: ArmAbsStepped took 128.6973 ms
17-02-28 20:15:16.059 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:16.060 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:15:16.062 -08 000000053 INF: ======================================
17-02-28 20:15:16.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:16.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:16.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.066 -08 000000044 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:16.066 -08 000000057 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:16.066 -08 000000044 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:16.066 -08 000000044 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:16.066 -08 000000044 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:16.066 -08 000000057 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:16.066 -08 000000044 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:16.066 -08 000000057 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:16.066 -08 000000057 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:16.067 -08 000000057 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:16.493 -08 000000053 INF: FPGA: Recv EX2MV
17-02-28 20:15:16.493 -08 000000053 INF: FPGA: Recv EX1MV
17-02-28 20:15:16.493 -08 000000057 INF: Excitation Filter 1: Moved -107 steps in 426.1848 ms
17-02-28 20:15:16.493 -08 000000057 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 426.3422 ms
17-02-28 20:15:16.494 -08 000000044 INF: Excitation Filter 2: Moved -107 steps in 426.4339 ms
17-02-28 20:15:16.494 -08 000000057 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.4483 ms
17-02-28 20:15:16.494 -08 000000044 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.6099 ms
17-02-28 20:15:16.494 -08 000000044 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.7239 ms
17-02-28 20:15:16.494 -08 000000057 INF: ======================================
17-02-28 20:15:16.494 -08 000000044 INF: ======================================
17-02-28 20:15:16.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:16.498 -08 000000084 INF: ===================Serial===================
17-02-28 20:15:16.498 -08 000000092 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:16.499 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:15:16.499 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:16.499 -08 000000084 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:15:16.499 -08 000000090 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:15:16.499 -08 000000084 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:16.499 -08 000000092 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:16.499 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:16.499 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:16.500 -08 000000058 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:16.500 -08 000000092 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:16.500 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:15:16.501 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:16.502 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.502 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.502 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.502 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.560 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.560 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:16.560 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:16.622 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.622 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:16.652 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.652 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.652 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.652 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:15:16.684 -08 000000090 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:15:16.746 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.746 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:15:16.746 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:16.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:16.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 28 of 40 seconds left===================
17-02-28 20:15:16.802 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.802 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.802 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.802 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.808 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:16.808 -08 000000090 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:15:16.808 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:16.932 -08 000000090 INF: Y Motor: Unshifted Position: 5929035
17-02-28 20:15:16.952 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.952 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:16.952 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.952 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:16.982 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.102 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:17.102 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:17.102 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:17.102 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:17.102 -08 000000055 INF: ===================Camera #0 Frame #1===================
17-02-28 20:15:17.102 -08 000000037 INF: ===================Camera #2 Frame #1===================
17-02-28 20:15:17.107 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.245 -08 000000090 INF: Y Motor: Unshifted Position: 5881927
17-02-28 20:15:17.256 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:17.256 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:17.256 -08 000000055 INF: ===================Camera #0 Frame #3===================
17-02-28 20:15:17.257 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:17.257 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:17.257 -08 000000037 INF: ===================Camera #2 Frame #3===================
17-02-28 20:15:17.295 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.412 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:17.412 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:17.412 -08 000000055 INF: ===================Camera #0 Frame #4===================
17-02-28 20:15:17.413 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:17.413 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:17.413 -08 000000037 INF: ===================Camera #2 Frame #4===================
17-02-28 20:15:17.419 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.558 -08 000000090 INF: Y Motor: Unshifted Position: 5835078
17-02-28 20:15:17.565 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:17.565 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:17.565 -08 000000055 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:17.566 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:17.566 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:17.566 -08 000000037 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:17.608 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.618 -08 000000010 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:17.618 -08 000000084 INF: ===================Serial===================
17-02-28 20:15:17.620 -08 000000084 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:15:17.620 -08 000000084 INF: ===================Serial===================
17-02-28 20:15:17.622 -08 000000084 INF: ======================================
17-02-28 20:15:17.680 -08 000000064 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:17.681 -08 000000092 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:17.683 -08 000000092 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:17.684 -08 000000057 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:17.684 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:17.684 -08 000000057 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:17.684 -08 000000057 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:17.684 -08 000000057 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:17.684 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:17.684 -08 000000057 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:17.684 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:17.684 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:17.685 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:17.718 -08 000000055 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:17.718 -08 000000055 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:17.718 -08 000000055 INF: ===================Camera #0 Frame #6===================
17-02-28 20:15:17.719 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:17.719 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:17.719 -08 000000037 INF: ===================Camera #2 Frame #6===================
17-02-28 20:15:17.721 -08 000000055 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:17.722 -08 000000037 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:17.722 -08 000000055 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:17.723 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:17.732 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:17.749 -08 000000037 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:17.749 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:17.750 -08 000000037 INF: ======================================
17-02-28 20:15:17.777 -08 000000055 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:17.777 -08 000000055 INF: ===================Camera TDI===================
17-02-28 20:15:17.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:17.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 40 seconds left===================
17-02-28 20:15:17.778 -08 000000055 INF: ======================================
17-02-28 20:15:17.780 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:15:17.781 -08 000000058 INF: ======================================
17-02-28 20:15:17.868 -08 000000090 INF: Y Motor: Unshifted Position: 5790761
17-02-28 20:15:17.918 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:18.054 -08 000000032 INF: FPGA: Recv EX1MV
17-02-28 20:15:18.054 -08 000000032 INF: FPGA: Recv EX2MV
17-02-28 20:15:18.054 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 369.9316 ms
17-02-28 20:15:18.054 -08 000000057 INF: Excitation Filter 1: Moved 107 steps in 370.1214 ms
17-02-28 20:15:18.054 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.1229 ms
17-02-28 20:15:18.054 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.2412 ms
17-02-28 20:15:18.054 -08 000000057 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.2647 ms
17-02-28 20:15:18.054 -08 000000057 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.435 ms
17-02-28 20:15:18.055 -08 000000010 INF: ======================================
17-02-28 20:15:18.055 -08 000000057 INF: ======================================
17-02-28 20:15:18.056 -08 000000090 INF: Y Motor: Unshifted Position: 5790745
17-02-28 20:15:18.056 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:18.056 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:18.056 -08 000000092 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:18.058 -08 000000092 INF: ======================================
17-02-28 20:15:18.119 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:18.119 -08 000000090 INF: Y Motor: Moved to 62.9075 after 1311 ms
17-02-28 20:15:18.119 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:18.180 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:18.180 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:18.180 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:18.245 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:18.245 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:18.245 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:18.307 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:18.369 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:18.431 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:18.431 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:18.431 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:18.493 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:18.493 -08 000000090 INF: ======================================
17-02-28 20:15:18.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:18.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:18.496 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.497 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:18.554 -08 000000055 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:18.554 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:18.615 -08 000000029 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:15:18.615 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:18.679 -08 000000044 INF: FPGA: Recv ZADCR 2422
17-02-28 20:15:18.680 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:15:18.680 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:18.744 -08 000000010 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:15:18.745 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:15:18.745 -08 000000018 INF: TDIScan finished after 6981.1297 ms
17-02-28 20:15:18.745 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:18.745 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:18.745 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:18.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:18.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 26 of 40 seconds left===================
17-02-28 20:15:18.806 -08 000000109 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:18.807 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.808 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.809 -08 000000062 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:18.809 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:18.809 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:18.809 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:18.809 -08 000000029 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:18.809 -08 000000062 INF: ======================================
17-02-28 20:15:18.810 -08 000000029 INF: ======================================
17-02-28 20:15:18.868 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:15:18.868 -08 000000104 INF: ======================================
17-02-28 20:15:18.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.870 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:18.913 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.913 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:18.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:18.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:19.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:19.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:19.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:19.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:15:19.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:15:19.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:15:19.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:15:19.726 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.060409642829983Best Z position at top surface = -0.132046439706963Best Z position at top surface + compensator offset = -0.109346439706963 C:3,L:6,T
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.132046439706963
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.77942
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.060409642829983
17-02-28 20:15:19.728 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.43441
17-02-28 20:15:19.728 -08 000000018 INF: Z-height at LaneTopSurface is -0.132046439706963.
17-02-28 20:15:19.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:19.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 25 of 40 seconds left===================
17-02-28 20:15:19.862 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:19.862 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:19.866 -08 000000037 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:19.867 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:15:19.868 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.868 -08 000000018 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:19.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.870 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:19.870 -08 000000109 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:19.870 -08 000000106 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:19.871 -08 000000106 INF: ======================================
17-02-28 20:15:19.871 -08 000000109 INF: ======================================
17-02-28 20:15:19.871 -08 000000064 INF: ======================================
17-02-28 20:15:19.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.874 -08 000000018 INF: ETF Best Z: -0.1093464 mm (28664 DAC)
17-02-28 20:15:19.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:19.875 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:15:19.875 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:15:20.309 -08 000000044 INF: FPGA: Recv MIOCOMPF
17-02-28 20:15:20.309 -08 000000018 INF: Compensator: Moved IntoPath in 434 ms
17-02-28 20:15:20.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:20.311 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:20.317 -08 000000018 INF: Swath 1 position calculated to be: {X=19.40993, Y=39.70011} from estimated center X= 19.887, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:20.317 -08 000000018 INF: Swath 2 position calculated to be: {X=20.51793, Y=39.70011} from estimated center X= 19.887, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:20.323 -08 000000018 INF: Swath 0: Converted transform from (50.73162, -19.93235) pixels to (0.017595, -0.0069) mm.
17-02-28 20:15:20.328 -08 000000018 INF: Swath 1: Converted transform from (25.25002, -15.87128) pixels to (0.008625, -0.00552) mm.
17-02-28 20:15:20.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:20.329 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:20.329 -08 000000018 INF: Transformed XStagePosition from 19.40993 mm to 19.4275242760777 mm.
17-02-28 20:15:20.341 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4832163330875 mm.
17-02-28 20:15:20.341 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2832163330875 mm.
17-02-28 20:15:20.341 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3739663330875 mm.
17-02-28 20:15:20.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:20.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:20.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:20.343 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:15:20.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:20.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:20.350 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:20.350 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:15:20.350 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:20.351 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:20.351 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:20.351 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:20.351 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:20.351 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:15:20.351 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:20.352 -08 000000052 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:20.352 -08 000000052 INF: Z Motor: Moving to -0.1293 mm, started at -0.0100 mm
17-02-28 20:15:20.352 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:20.352 -08 000000052 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:20.352 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:20.352 -08 000000075 INF: ===================Move X Motor without settling===================
17-02-28 20:15:20.352 -08 000000068 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:20.352 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:20.352 -08 000000075 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:20.352 -08 000000068 INF: Y Motor: Moving to 64.4832 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:15:20.352 -08 000000068 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:20.352 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:20.353 -08 000000057 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:20.353 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:20.353 -08 000000045 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:20.353 -08 000000057 INF: ======================================
17-02-28 20:15:20.353 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:20.353 -08 000000092 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:20.353 -08 000000010 INF: ======================================
17-02-28 20:15:20.354 -08 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:20.354 -08 000000050 INF: ======================================
17-02-28 20:15:20.354 -08 000000089 INF: ======================================
17-02-28 20:15:20.354 -08 000000092 INF: ======================================
17-02-28 20:15:20.355 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:20.355 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:20.356 -08 000000076 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:20.356 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:20.356 -08 000000030 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:20.356 -08 000000064 INF: ======================================
17-02-28 20:15:20.356 -08 000000045 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:20.356 -08 000000076 INF: ======================================
17-02-28 20:15:20.356 -08 000000050 INF: ======================================
17-02-28 20:15:20.357 -08 000000045 INF: ======================================
17-02-28 20:15:20.357 -08 000000030 INF: ======================================
17-02-28 20:15:20.357 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:20.358 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:20.359 -08 000000029 INF: ======================================
17-02-28 20:15:20.359 -08 000000109 INF: ======================================
17-02-28 20:15:20.360 -08 000000066 INF: ======================================
17-02-28 20:15:20.424 -08 000000109 INF: FPGA: Recv ZTRG 
17-02-28 20:15:20.424 -08 000000052 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:20.426 -08 000000075 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:20.426 -08 000000075 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:20.426 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.426 -08 000000068 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:20.426 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:20.489 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:15:20.489 -08 000000052 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:20.489 -08 000000052 INF: FPGA: Xmit ZMV 33907\n
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Moving to 19.4275 mm @15.000 mm/sec, started at 19.9644 mm
17-02-28 20:15:20.491 -08 000000075 INF: X Motor: Xmit MA -16209\n
17-02-28 20:15:20.491 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.491 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:20.551 -08 000000062 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:20.551 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:20.553 -08 000000075 INF: X Motor: Recv MA -16209\r\n>
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Set target position to 5948322 encoder counts
17-02-28 20:15:20.553 -08 000000068 INF: Y Motor: Xmit s r0xca 5948322\r
17-02-28 20:15:20.553 -08 000000075 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:15:20.615 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.615 -08 000000068 INF: Y Motor: Start the move command
17-02-28 20:15:20.615 -08 000000068 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:20.675 -08 000000050 INF: FPGA: Recv ZMV 
17-02-28 20:15:20.675 -08 000000052 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.8929 ms
17-02-28 20:15:20.675 -08 000000052 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:20.677 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:20.677 -08 000000068 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:15:20.677 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:20.737 -08 000000038 INF: FPGA: Recv ZDACR 33907
17-02-28 20:15:20.737 -08 000000052 INF: Z Motor: MoveAndTrigger took 385.2253 ms w/comms
17-02-28 20:15:20.737 -08 000000052 INF: Z Motor: After move to -0.1293, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:20.737 -08 000000052 INF: Z Motor: MoveAbsStepped took 385.401 ms
17-02-28 20:15:20.737 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:20.739 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:15:20.740 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:20.740 -08 000000109 INF: ===================Camera Arm TDI===================
17-02-28 20:15:20.740 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.741 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:20.741 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:20.741 -08 000000109 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:20.741 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:20.742 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:15:20.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:20.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 24 of 40 seconds left===================
17-02-28 20:15:20.799 -08 000000064 INF: FPGA: Recv ZSEL 
17-02-28 20:15:20.800 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:20.800 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:15:20.801 -08 000000068 INF: Y Motor: Unshifted Position: 5871807
17-02-28 20:15:20.851 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:20.863 -08 000000038 INF: FPGA: Recv TDIBB
17-02-28 20:15:20.864 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:20.865 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:20.865 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.867 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:15:20.867 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:15:20.867 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:15:20.926 -08 000000050 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:20.926 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.928 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:20.928 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:20.930 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:20.930 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:20.930 -08 000000089 INF: Z Motor: Arming to move to -0.0893 mm
17-02-28 20:15:20.930 -08 000000089 INF: FPGA: Xmit ZYT 6428322 4\n
17-02-28 20:15:20.978 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:20.988 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:15:20.988 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6371807 enc / 63.718 mm / ) = 6428322 enc / 64.283 mm
17-02-28 20:15:20.988 -08 000000089 INF: FPGA: Xmit ZARM 23421\n
17-02-28 20:15:20.990 -08 000000075 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:21.050 -08 000000057 INF: FPGA: Recv ZARM
17-02-28 20:15:21.050 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9233 ms
17-02-28 20:15:21.050 -08 000000089 INF: Z Motor: ArmAbsStepped took 119.7485 ms
17-02-28 20:15:21.050 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:21.051 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:21.052 -08 000000075 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:21.052 -08 000000075 INF: X Motor: Moved to 19.4272 after 498 ms
17-02-28 20:15:21.052 -08 000000075 INF: ======================================
17-02-28 20:15:21.053 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:21.053 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:21.055 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:21.055 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:15:21.057 -08 000000089 INF: ======================================
17-02-28 20:15:21.114 -08 000000068 INF: Y Motor: Unshifted Position: 5948323
17-02-28 20:15:21.114 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:21.114 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:21.176 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:21.176 -08 000000068 INF: Y Motor: Moved to 64.4832 after 499 ms
17-02-28 20:15:21.176 -08 000000068 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:21.238 -08 000000068 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:21.238 -08 000000068 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:21.238 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:21.300 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:21.300 -08 000000068 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:21.300 -08 000000068 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:21.364 -08 000000068 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:21.426 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:21.487 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:21.487 -08 000000068 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:21.487 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:21.552 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:15:21.552 -08 000000068 INF: ======================================
17-02-28 20:15:21.553 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:15:21.554 -08 000000037 INF: ======================================
17-02-28 20:15:21.688 -08 000000109 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:21.688 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:21.688 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:21.704 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:21.706 -08 000000109 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:21.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:21.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 40 seconds left===================
17-02-28 20:15:22.761 -08 000000109 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:22.761 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:22.761 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:22.776 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:22.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:22.778 -08 000000109 INF: ===================Camera Arm TDI===================
17-02-28 20:15:22.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 22 of 40 seconds left===================
17-02-28 20:15:22.779 -08 000000109 INF: ======================================
17-02-28 20:15:22.780 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:22.781 -08 000000052 INF: ======================================
17-02-28 20:15:22.782 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:22.783 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:22.783 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:22.783 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:22.860 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:22.860 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:22.920 -08 000000098 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:22.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:22.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:22.920 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:22.985 -08 000000095 INF: FPGA: Recv TDIYERD 6448323
17-02-28 20:15:22.985 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448323 counts (64.483 mm)
17-02-28 20:15:22.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:22.986 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:22.986 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:22.986 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:22.987 -08 000000047 INF: ======================================
17-02-28 20:15:22.987 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:22.988 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:22.988 -08 000000038 INF: FPGA: Xmit TDIYPOS 6337397\n
17-02-28 20:15:23.047 -08 000000068 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:23.047 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:23.049 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:23.049 -08 000000038 INF: FPGA: Xmit TDIYARM3 139264 6428322 1 1\n
17-02-28 20:15:23.109 -08 000000075 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:23.109 -08 000000038 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:23.110 -08 000000038 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:23.111 -08 000000038 INF: ======================================
17-02-28 20:15:23.112 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:23.113 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:23.113 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.115 -08 000000101 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:23.115 -08 000000076 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:23.115 -08 000000101 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:23.115 -08 000000101 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:23.115 -08 000000101 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:23.115 -08 000000101 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:23.115 -08 000000076 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:23.115 -08 000000076 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:23.115 -08 000000076 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:23.116 -08 000000076 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:23.482 -08 000000104 INF: FPGA: Recv EX2MV
17-02-28 20:15:23.482 -08 000000104 INF: FPGA: Recv EX1MV
17-02-28 20:15:23.482 -08 000000076 INF: Excitation Filter 1: Moved -107 steps in 366.5212 ms
17-02-28 20:15:23.482 -08 000000076 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.6109 ms
17-02-28 20:15:23.482 -08 000000076 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.6915 ms
17-02-28 20:15:23.482 -08 000000101 INF: Excitation Filter 2: Moved -107 steps in 366.7409 ms
17-02-28 20:15:23.482 -08 000000101 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.9341 ms
17-02-28 20:15:23.482 -08 000000101 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.004 ms
17-02-28 20:15:23.482 -08 000000076 INF: ======================================
17-02-28 20:15:23.482 -08 000000101 INF: ======================================
17-02-28 20:15:23.483 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.485 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:23.485 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:15:23.485 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:15:23.485 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:23.486 -08 000000050 INF: Y Motor: Moving to 14.8349 mm @6.500 mm/sec, started at 64.4832 mm
17-02-28 20:15:23.486 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:23.486 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:23.486 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:23.486 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:23.486 -08 000000075 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:23.487 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:23.487 -08 000000075 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:23.487 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:15:23.488 -08 000000075 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:23.489 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.489 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.489 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.489 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.546 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.546 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:23.546 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:23.611 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.611 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:23.639 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.639 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.639 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.639 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Set target position to 983488 encoder counts
17-02-28 20:15:23.673 -08 000000050 INF: Y Motor: Xmit s r0xca 983488\r
17-02-28 20:15:23.735 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.735 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:15:23.735 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:23.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:23.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 21 of 40 seconds left===================
17-02-28 20:15:23.789 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.789 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:23.789 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.789 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:23.797 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:23.797 -08 000000050 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:23.797 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:23.859 -08 000000084 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:23.860 -08 000000051 INF: ======================================
17-02-28 20:15:23.921 -08 000000050 INF: Y Motor: Unshifted Position: 5885816
17-02-28 20:15:23.939 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:23.939 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:23.939 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:23.939 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:23.939 -08 000000068 INF: ===================Camera #0 Frame #4===================
17-02-28 20:15:23.939 -08 000000032 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:23.971 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.098 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.102 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:15:24.102 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:15:24.102 -08 000000068 INF: ===================Camera #0 Frame #10===================
17-02-28 20:15:24.107 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:24.107 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:24.107 -08 000000032 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:24.234 -08 000000050 INF: Y Motor: Unshifted Position: 5682802
17-02-28 20:15:24.272 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:24.272 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:24.272 -08 000000068 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:24.278 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:24.278 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:24.278 -08 000000032 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:24.284 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.407 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.446 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:24.446 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:24.446 -08 000000068 INF: ===================Camera #0 Frame #23===================
17-02-28 20:15:24.449 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:24.449 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:24.449 -08 000000032 INF: ===================Camera #2 Frame #23===================
17-02-28 20:15:24.546 -08 000000050 INF: Y Motor: Unshifted Position: 5479788
17-02-28 20:15:24.596 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.616 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:15:24.616 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:15:24.616 -08 000000068 INF: ===================Camera #0 Frame #29===================
17-02-28 20:15:24.620 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:24.620 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:24.620 -08 000000032 INF: ===================Camera #2 Frame #30===================
17-02-28 20:15:24.720 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:24.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 20 of 40 seconds left===================
17-02-28 20:15:24.786 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:15:24.786 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:15:24.786 -08 000000068 INF: ===================Camera #0 Frame #36===================
17-02-28 20:15:24.794 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:15:24.794 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:15:24.794 -08 000000032 INF: ===================Camera #2 Frame #36===================
17-02-28 20:15:24.859 -08 000000050 INF: Y Motor: Unshifted Position: 5278287
17-02-28 20:15:24.909 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:24.959 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:24.959 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:24.959 -08 000000068 INF: ===================Camera #0 Frame #42===================
17-02-28 20:15:24.965 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:24.965 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:24.965 -08 000000032 INF: ===================Camera #2 Frame #42===================
17-02-28 20:15:25.033 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.129 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:15:25.129 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:15:25.129 -08 000000068 INF: ===================Camera #0 Frame #48===================
17-02-28 20:15:25.136 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:15:25.136 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:15:25.136 -08 000000032 INF: ===================Camera #2 Frame #49===================
17-02-28 20:15:25.169 -08 000000050 INF: Y Motor: Unshifted Position: 5074619
17-02-28 20:15:25.219 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.299 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:15:25.299 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:15:25.299 -08 000000068 INF: ===================Camera #0 Frame #55===================
17-02-28 20:15:25.310 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:15:25.310 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:15:25.310 -08 000000032 INF: ===================Camera #2 Frame #55===================
17-02-28 20:15:25.343 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.473 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:15:25.473 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:15:25.473 -08 000000068 INF: ===================Camera #0 Frame #61===================
17-02-28 20:15:25.481 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:15:25.481 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:15:25.481 -08 000000032 INF: ===================Camera #2 Frame #61===================
17-02-28 20:15:25.485 -08 000000050 INF: Y Motor: Unshifted Position: 4872471
17-02-28 20:15:25.535 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.643 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:15:25.643 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:15:25.643 -08 000000068 INF: ===================Camera #0 Frame #67===================
17-02-28 20:15:25.651 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:15:25.651 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:15:25.651 -08 000000032 INF: ===================Camera #2 Frame #68===================
17-02-28 20:15:25.657 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:25.778 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 19 of 40 seconds left===================
17-02-28 20:15:25.795 -08 000000050 INF: Y Motor: Unshifted Position: 4669021
17-02-28 20:15:25.813 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:15:25.813 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:15:25.813 -08 000000068 INF: ===================Camera #0 Frame #73===================
17-02-28 20:15:25.825 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:15:25.825 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:15:25.825 -08 000000032 INF: ===================Camera #2 Frame #74===================
17-02-28 20:15:25.845 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.968 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:25.983 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:15:25.983 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:15:25.983 -08 000000068 INF: ===================Camera #0 Frame #80===================
17-02-28 20:15:25.996 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:15:25.996 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:15:25.996 -08 000000032 INF: ===================Camera #2 Frame #80===================
17-02-28 20:15:26.106 -08 000000050 INF: Y Motor: Unshifted Position: 4465342
17-02-28 20:15:26.156 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.157 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:15:26.157 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:15:26.157 -08 000000068 INF: ===================Camera #0 Frame #86===================
17-02-28 20:15:26.167 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:15:26.167 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:15:26.167 -08 000000032 INF: ===================Camera #2 Frame #87===================
17-02-28 20:15:26.281 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.327 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:15:26.327 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:15:26.327 -08 000000068 INF: ===================Camera #0 Frame #92===================
17-02-28 20:15:26.341 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:15:26.341 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:15:26.341 -08 000000032 INF: ===================Camera #2 Frame #93===================
17-02-28 20:15:26.418 -08 000000050 INF: Y Motor: Unshifted Position: 4263846
17-02-28 20:15:26.419 -08 000000084 INF: RunCopyService queue size at 2/28/2017 8:15:26 PM is 2
17-02-28 20:15:26.468 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.497 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:15:26.497 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:15:26.497 -08 000000068 INF: ===================Camera #0 Frame #99===================
17-02-28 20:15:26.512 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:15:26.512 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:15:26.512 -08 000000032 INF: ===================Camera #2 Frame #99===================
17-02-28 20:15:26.592 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.670 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:15:26.670 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:15:26.670 -08 000000068 INF: ===================Camera #0 Frame #105===================
17-02-28 20:15:26.683 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:15:26.683 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:15:26.683 -08 000000032 INF: ===================Camera #2 Frame #105===================
17-02-28 20:15:26.731 -08 000000050 INF: Y Motor: Unshifted Position: 4059520
17-02-28 20:15:26.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:26.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 18 of 40 seconds left===================
17-02-28 20:15:26.781 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:26.840 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:15:26.840 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:15:26.840 -08 000000068 INF: ===================Camera #0 Frame #111===================
17-02-28 20:15:26.854 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:15:26.854 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:15:26.854 -08 000000032 INF: ===================Camera #2 Frame #112===================
17-02-28 20:15:26.905 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.010 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:15:27.010 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:15:27.010 -08 000000068 INF: ===================Camera #0 Frame #118===================
17-02-28 20:15:27.028 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:15:27.028 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:15:27.028 -08 000000032 INF: ===================Camera #2 Frame #118===================
17-02-28 20:15:27.044 -08 000000050 INF: Y Motor: Unshifted Position: 3858024
17-02-28 20:15:27.094 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.183 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:15:27.183 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:15:27.183 -08 000000068 INF: ===================Camera #0 Frame #124===================
17-02-28 20:15:27.198 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:15:27.198 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:15:27.198 -08 000000032 INF: ===================Camera #2 Frame #124===================
17-02-28 20:15:27.218 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.353 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:15:27.353 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:15:27.353 -08 000000068 INF: ===================Camera #0 Frame #130===================
17-02-28 20:15:27.354 -08 000000050 INF: Y Motor: Unshifted Position: 3654359
17-02-28 20:15:27.369 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:15:27.369 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:15:27.369 -08 000000032 INF: ===================Camera #2 Frame #131===================
17-02-28 20:15:27.404 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.522 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:15:27.522 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:15:27.522 -08 000000068 INF: ===================Camera #0 Frame #136===================
17-02-28 20:15:27.528 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.543 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:15:27.543 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:15:27.543 -08 000000032 INF: ===================Camera #2 Frame #137===================
17-02-28 20:15:27.669 -08 000000050 INF: Y Motor: Unshifted Position: 3450902
17-02-28 20:15:27.692 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:15:27.692 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:15:27.692 -08 000000068 INF: ===================Camera #0 Frame #143===================
17-02-28 20:15:27.714 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:15:27.714 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:15:27.714 -08 000000032 INF: ===================Camera #2 Frame #143===================
17-02-28 20:15:27.719 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:27.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 40 seconds left===================
17-02-28 20:15:27.841 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:27.865 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:15:27.865 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:15:27.865 -08 000000068 INF: ===================Camera #0 Frame #149===================
17-02-28 20:15:27.885 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:15:27.885 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:15:27.885 -08 000000032 INF: ===================Camera #2 Frame #150===================
17-02-28 20:15:27.980 -08 000000050 INF: Y Motor: Unshifted Position: 3249190
17-02-28 20:15:28.030 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.035 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:15:28.035 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:15:28.035 -08 000000068 INF: ===================Camera #0 Frame #155===================
17-02-28 20:15:28.059 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:15:28.059 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:15:28.059 -08 000000032 INF: ===================Camera #2 Frame #156===================
17-02-28 20:15:28.154 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.205 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:15:28.205 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:15:28.205 -08 000000068 INF: ===================Camera #0 Frame #162===================
17-02-28 20:15:28.230 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:15:28.230 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:15:28.230 -08 000000032 INF: ===================Camera #2 Frame #162===================
17-02-28 20:15:28.290 -08 000000050 INF: Y Motor: Unshifted Position: 3045743
17-02-28 20:15:28.340 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.378 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:15:28.378 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:15:28.378 -08 000000068 INF: ===================Camera #0 Frame #168===================
17-02-28 20:15:28.401 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:15:28.401 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:15:28.401 -08 000000032 INF: ===================Camera #2 Frame #169===================
17-02-28 20:15:28.464 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.548 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:15:28.548 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:15:28.548 -08 000000068 INF: ===================Camera #0 Frame #174===================
17-02-28 20:15:28.575 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:15:28.575 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:15:28.575 -08 000000032 INF: ===================Camera #2 Frame #175===================
17-02-28 20:15:28.603 -08 000000050 INF: Y Motor: Unshifted Position: 2842081
17-02-28 20:15:28.653 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.718 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:15:28.718 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:15:28.718 -08 000000068 INF: ===================Camera #0 Frame #180===================
17-02-28 20:15:28.746 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:15:28.746 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:15:28.746 -08 000000032 INF: ===================Camera #2 Frame #181===================
17-02-28 20:15:28.777 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:28.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:28.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 16 of 40 seconds left===================
17-02-28 20:15:28.888 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:15:28.888 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:15:28.888 -08 000000068 INF: ===================Camera #0 Frame #187===================
17-02-28 20:15:28.914 -08 000000050 INF: Y Motor: Unshifted Position: 2640365
17-02-28 20:15:28.917 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:15:28.917 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:15:28.917 -08 000000032 INF: ===================Camera #2 Frame #188===================
17-02-28 20:15:28.964 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.061 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:15:29.061 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:15:29.061 -08 000000068 INF: ===================Camera #0 Frame #193===================
17-02-28 20:15:29.090 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.091 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:15:29.091 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:15:29.091 -08 000000032 INF: ===================Camera #2 Frame #194===================
17-02-28 20:15:29.227 -08 000000050 INF: Y Motor: Unshifted Position: 2436276
17-02-28 20:15:29.231 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:15:29.231 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:15:29.231 -08 000000068 INF: ===================Camera #0 Frame #199===================
17-02-28 20:15:29.262 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:15:29.262 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:15:29.262 -08 000000032 INF: ===================Camera #2 Frame #200===================
17-02-28 20:15:29.277 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.401 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.401 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:15:29.401 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:15:29.401 -08 000000068 INF: ===================Camera #0 Frame #206===================
17-02-28 20:15:29.433 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:15:29.433 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:15:29.433 -08 000000032 INF: ===================Camera #2 Frame #207===================
17-02-28 20:15:29.537 -08 000000050 INF: Y Motor: Unshifted Position: 2234555
17-02-28 20:15:29.574 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:15:29.574 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:15:29.574 -08 000000068 INF: ===================Camera #0 Frame #212===================
17-02-28 20:15:29.587 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.608 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:15:29.608 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:15:29.608 -08 000000032 INF: ===================Camera #2 Frame #213===================
17-02-28 20:15:29.712 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.744 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:15:29.744 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:15:29.744 -08 000000068 INF: ===================Camera #0 Frame #218===================
17-02-28 20:15:29.779 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:15:29.779 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:15:29.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:29.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 15 of 40 seconds left===================
17-02-28 20:15:29.779 -08 000000032 INF: ===================Camera #2 Frame #219===================
17-02-28 20:15:29.851 -08 000000050 INF: Y Motor: Unshifted Position: 2030450
17-02-28 20:15:29.901 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:29.914 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:15:29.914 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:15:29.914 -08 000000068 INF: ===================Camera #0 Frame #224===================
17-02-28 20:15:29.950 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:15:29.950 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:15:29.950 -08 000000032 INF: ===================Camera #2 Frame #226===================
17-02-28 20:15:30.025 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.084 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:15:30.084 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:15:30.084 -08 000000068 INF: ===================Camera #0 Frame #231===================
17-02-28 20:15:30.125 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:15:30.125 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:15:30.125 -08 000000032 INF: ===================Camera #2 Frame #232===================
17-02-28 20:15:30.161 -08 000000050 INF: Y Motor: Unshifted Position: 1828948
17-02-28 20:15:30.211 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.257 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:15:30.257 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:15:30.257 -08 000000068 INF: ===================Camera #0 Frame #237===================
17-02-28 20:15:30.296 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:15:30.296 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:15:30.296 -08 000000032 INF: ===================Camera #2 Frame #239===================
17-02-28 20:15:30.336 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.427 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:15:30.427 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:15:30.427 -08 000000068 INF: ===================Camera #0 Frame #243===================
17-02-28 20:15:30.471 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:15:30.471 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:15:30.471 -08 000000032 INF: ===================Camera #2 Frame #245===================
17-02-28 20:15:30.473 -08 000000050 INF: Y Motor: Unshifted Position: 1623340
17-02-28 20:15:30.523 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.597 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:15:30.597 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:15:30.597 -08 000000068 INF: ===================Camera #0 Frame #250===================
17-02-28 20:15:30.641 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:15:30.641 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:15:30.641 -08 000000032 INF: ===================Camera #2 Frame #251===================
17-02-28 20:15:30.648 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.770 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:15:30.770 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:15:30.770 -08 000000068 INF: ===================Camera #0 Frame #256===================
17-02-28 20:15:30.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:30.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 40 seconds left===================
17-02-28 20:15:30.787 -08 000000050 INF: Y Motor: Unshifted Position: 1421607
17-02-28 20:15:30.812 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:15:30.812 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:15:30.812 -08 000000032 INF: ===================Camera #2 Frame #258===================
17-02-28 20:15:30.837 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.939 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:15:30.939 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:15:30.939 -08 000000068 INF: ===================Camera #0 Frame #262===================
17-02-28 20:15:30.961 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:30.987 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:15:30.987 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:15:30.987 -08 000000032 INF: ===================Camera #2 Frame #264===================
17-02-28 20:15:31.097 -08 000000050 INF: Y Motor: Unshifted Position: 1220108
17-02-28 20:15:31.109 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:15:31.109 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:15:31.109 -08 000000068 INF: ===================Camera #0 Frame #268===================
17-02-28 20:15:31.147 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:31.158 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:15:31.158 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:15:31.158 -08 000000032 INF: ===================Camera #2 Frame #270===================
17-02-28 20:15:31.220 -08 000000104 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:31.221 -08 000000075 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:31.222 -08 000000075 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:31.223 -08 000000028 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:31.223 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:31.223 -08 000000028 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:31.223 -08 000000028 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:31.223 -08 000000028 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:31.223 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:31.223 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:31.223 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:31.223 -08 000000028 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:31.226 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:31.272 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:31.279 -08 000000068 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:31.279 -08 000000068 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:31.279 -08 000000068 INF: ===================Camera #0 Frame #272===================
17-02-28 20:15:31.292 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:31.293 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:31.411 -08 000000050 INF: Y Motor: Unshifted Position: 1016012
17-02-28 20:15:31.458 -08 000000068 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:31.458 -08 000000032 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:31.458 -08 000000032 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:31.458 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:15:31.458 -08 000000032 INF: ===================Camera #2 Frame #272===================
17-02-28 20:15:31.461 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:31.465 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:31.466 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:31.492 -08 000000068 INF: ======================================
17-02-28 20:15:31.597 -08 000000076 INF: FPGA: Recv EX1MV
17-02-28 20:15:31.597 -08 000000076 INF: FPGA: Recv EX2MV
17-02-28 20:15:31.597 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 373.4501 ms
17-02-28 20:15:31.597 -08 000000028 INF: Excitation Filter 1: Moved 107 steps in 373.6204 ms
17-02-28 20:15:31.597 -08 000000028 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.7409 ms
17-02-28 20:15:31.597 -08 000000028 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.8234 ms
17-02-28 20:15:31.597 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.5828 ms
17-02-28 20:15:31.597 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.9576 ms
17-02-28 20:15:31.598 -08 000000028 INF: ======================================
17-02-28 20:15:31.598 -08 000000095 INF: ======================================
17-02-28 20:15:31.599 -08 000000075 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:31.600 -08 000000050 INF: Y Motor: Unshifted Position: 983488
17-02-28 20:15:31.600 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:31.600 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:31.600 -08 000000075 INF: ======================================
17-02-28 20:15:31.661 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:31.661 -08 000000050 INF: Y Motor: Moved to 14.8349 after 7863 ms
17-02-28 20:15:31.661 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:31.665 -08 000000032 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:31.665 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:15:31.700 -08 000000032 INF: ======================================
17-02-28 20:15:31.701 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:15:31.702 -08 000000090 INF: ======================================
17-02-28 20:15:31.723 -08 000000050 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:31.723 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:31.723 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:31.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:31.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left===================
17-02-28 20:15:31.785 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:31.785 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:31.785 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:31.847 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:31.909 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:31.971 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:31.971 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:31.971 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:32.033 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.034 -08 000000050 INF: ======================================
17-02-28 20:15:32.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:32.036 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:32.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.037 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:32.097 -08 000000032 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:32.097 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:32.156 -08 000000068 INF: FPGA: Recv TDIYERD 1483488
17-02-28 20:15:32.156 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:32.219 -08 000000038 INF: FPGA: Recv ZADCR 33441
17-02-28 20:15:32.219 -08 000000018 INF: At scan end Y pos = 14.835 and Z pos = -0.128. Y moved -48.539 mm
17-02-28 20:15:32.219 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:32.281 -08 000000064 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:15:32.281 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:15:32.281 -08 000000018 INF: TDIScan finished after 11951.0609 ms
17-02-28 20:15:32.281 -08 000000018 INF: Image[0]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:15:32.281 -08 000000018 INF: Image[2]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:15:32.283 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.315 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.810 um
17-02-28 20:15:32.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.316 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:32.343 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:32.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.344 -08 000000076 INF: ===================Dither Clean Up Command===================
17-02-28 20:15:32.344 -08 000000037 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:32.344 -08 000000066 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:32.344 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:32.345 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:32.345 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:32.345 -08 000000037 INF: ======================================
17-02-28 20:15:32.345 -08 000000066 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:32.345 -08 000000066 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:32.345 -08 000000098 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:32.345 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:32.346 -08 000000098 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:15:32.349 -08 000000074 INF: ===================LFT:Extracting coords===================
17-02-28 20:15:32.377 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:32.378 -08 000000074 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:15:32.379 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000045 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.379 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.379 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.380 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.380 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:32.409 -08 000000028 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:32.409 -08 000000028 INF: FPGA: Recv ZSEL 
17-02-28 20:15:32.409 -08 000000098 INF: FPGA: Xmit ZDACW 33907\n
17-02-28 20:15:32.409 -08 000000064 INF: ======================================
17-02-28 20:15:32.411 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.411 -08 000000066 INF: ======================================
17-02-28 20:15:32.455 -08 000000046 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.455 -08 000000050 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.456 -08 000000045 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.465 -08 000000085 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:32.471 -08 000000109 INF: FPGA: Recv ZDACW 
17-02-28 20:15:32.471 -08 000000098 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:15:32.471 -08 000000098 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:15:32.530 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:15:32.530 -08 000000098 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:32.531 -08 000000098 INF: ======================================
17-02-28 20:15:32.607 -08 000000046 INF: LFT found best fwhm score 2.000104 in 152 ms
17-02-28 20:15:32.607 -08 000000046 INF: LFT found good score at index 2941 with fwhm value 2.000104. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.607 -08 000000050 INF: LFT found best fwhm score 2.000261 in 152 ms
17-02-28 20:15:32.608 -08 000000050 INF: LFT found good score at index 4861 with fwhm value 2.000261. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.608 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.608 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.608 -08 000000046 INF: ======================================
17-02-28 20:15:32.608 -08 000000050 INF: ======================================
17-02-28 20:15:32.608 -08 000000045 INF: LFT found best fwhm score 2.000585 in 152 ms
17-02-28 20:15:32.608 -08 000000045 INF: LFT found good score at index 8861 with fwhm value 2.000585. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.608 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.609 -08 000000045 INF: ======================================
17-02-28 20:15:32.636 -08 000000085 INF: LFT found best fwhm score 2.20749 in 171 ms
17-02-28 20:15:32.636 -08 000000085 INF: LFT found good score at index 7057 with fwhm value 2.20749. Next cycle, cycle 4 starting Z position for top surface is at -0.131 mm FC:A, C:3,L:6,T
17-02-28 20:15:32.637 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:15:32.637 -08 000000085 INF: ======================================
17-02-28 20:15:32.638 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:32.639 -08 000000074 INF: LFT weighted average best Z for top surface is at -0.131mm FC:A, C:3,L:6,T
17-02-28 20:15:32.639 -08 000000074 INF: ======================================
17-02-28 20:15:32.641 -08 000000076 INF: ======================================
17-02-28 20:15:32.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:32.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:32.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 19.40993 Y = 39.70011===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:15:32.645 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left===================
17-02-28 20:15:32.668 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:15:32.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:32.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:32.668 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:32.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:32.669 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:15:32.669 -08 000000018 INF: Transformed XStagePosition from 20.51793 mm to 20.5265540769324 mm.
17-02-28 20:15:32.740 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4845963328853 mm.
17-02-28 20:15:32.740 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2845963328853 mm.
17-02-28 20:15:32.740 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3753463328853 mm.
17-02-28 20:15:32.741 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":6,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF246","HCSMMF185","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:32.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:32.746 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -129.3 um, section = F_1
17-02-28 20:15:32.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:32.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:32.752 -08 000000028 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:32.752 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:15:32.753 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:32.753 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:32.754 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:15:32.754 -08 000000071 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:32.754 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:32.755 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:32.756 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:15:32.756 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:32.758 -08 000000082 INF: ===================Move X Motor without settling===================
17-02-28 20:15:32.758 -08 000000082 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:32.761 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:32.761 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:32.761 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:32.762 -08 000000095 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:32.762 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:32.762 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.762 -08 000000052 INF: Y Motor: Moving to 64.4846 mm @25.000 mm/sec, started at 14.8349 mm
17-02-28 20:15:32.762 -08 000000095 INF: ======================================
17-02-28 20:15:32.762 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:32.763 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:32.763 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:32.763 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:32.763 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:32.764 -08 000000058 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:15:32.764 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:15:32.764 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:32.764 -08 000000079 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:32.765 -08 000000079 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:32.765 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:32.765 -08 000000079 INF: ======================================
17-02-28 20:15:32.766 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:32.766 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:32.767 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:32.767 -08 000000079 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:32.767 -08 000000079 INF: ======================================
17-02-28 20:15:32.768 -08 000000010 INF: ======================================
17-02-28 20:15:32.769 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:32.770 -08 000000079 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:32.770 -08 000000079 INF: ======================================
17-02-28 20:15:32.770 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:32.771 -08 000000010 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:32.771 -08 000000064 INF: ======================================
17-02-28 20:15:32.772 -08 000000010 INF: ======================================
17-02-28 20:15:32.772 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:32.772 -08 000000079 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:32.772 -08 000000079 INF: ======================================
17-02-28 20:15:32.773 -08 000000064 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:32.773 -08 000000064 INF: ======================================
17-02-28 20:15:32.773 -08 000000025 INF: ======================================
17-02-28 20:15:32.774 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:32.775 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:32.776 -08 000000098 INF: ======================================
17-02-28 20:15:32.776 -08 000000099 INF: ======================================
17-02-28 20:15:32.778 -08 000000028 INF: ======================================
17-02-28 20:15:32.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:32.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 12 of 40 seconds left===================
17-02-28 20:15:32.811 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":6,"Tile":1103,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF233","HCSMMF237","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.812 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":6,"Tile":1102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF230","HCSMMF250","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.812 -08 000000028 INF: FPGA: Recv ZSEL 
17-02-28 20:15:32.814 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.814 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:32.814 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:32.814 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:32.814 -08 000000058 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:15:32.821 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":6,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF267","HCSMMF242","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.822 -08 000000082 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:32.822 -08 000000082 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:32.824 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":6,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF212","HCSMMF192","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.825 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":6,"Tile":1110,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF231","HCSMMF262","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.874 -08 000000028 INF: FPGA: Recv TDIBB
17-02-28 20:15:32.874 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:32.876 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:32.876 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:32.876 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Moving to 20.5266 mm @15.000 mm/sec, started at 19.4272 mm
17-02-28 20:15:32.876 -08 000000082 INF: X Motor: Xmit MA -15759\n
17-02-28 20:15:32.876 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.878 -08 000000058 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:15:32.878 -08 000000058 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:15:32.878 -08 000000058 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:15:32.885 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":6,"Tile":1106,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF177","HCSMMF266","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.886 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":6,"Tile":1108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF251","HCSMMF228","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.886 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":6,"Tile":1111,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF227","HCSMMF259","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.887 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":6,"Tile":1105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF203","HCSMMF279","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.888 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":6,"Tile":1112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF247","HCSMMF260","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.888 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":6,"Tile":1113,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF207","HCSMMF190","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.889 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":6,"Tile":1109,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF215","HCSMMF198","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.890 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":6,"Tile":1116,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF286","HCSMMF204","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.891 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":6,"Tile":1119,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF264","HCSMMF214","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.892 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":6,"Tile":1114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF208","HCSMMF199","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.893 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":6,"Tile":1115,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF194","HCSMMF221","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.893 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":6,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF285","HCSMMF273","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.894 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":6,"Tile":1121,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF224","HCSMMF217","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.895 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":6,"Tile":1118,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF283","HCSMMF234","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.895 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":6,"Tile":1117,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF277","HCSMMF178","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.896 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":6,"Tile":1123,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF206","HCSMMF193","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.897 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":6,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF209","HCSMMF258","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.898 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":6,"Tile":1124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF272","HCSMMF211","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.899 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":6,"Tile":1128,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF186","HCSMMF235","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.900 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":6,"Tile":1125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF284","HCSMMF232","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.900 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":6,"Tile":1126,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF256","HCSMMF255","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.903 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":6,"Tile":1122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF280","HCSMMF269","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:32.910 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:32.916 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:15:32.936 -08 000000084 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:32.936 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.938 -08 000000082 INF: X Motor: Recv MA -15759\r\n>
17-02-28 20:15:32.938 -08 000000082 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:15:32.938 -08 000000058 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:32.938 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Set target position to 5948460 encoder counts
17-02-28 20:15:32.940 -08 000000052 INF: Y Motor: Xmit s r0xca 5948460\r
17-02-28 20:15:32.940 -08 000000058 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:32.940 -08 000000058 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:32.940 -08 000000058 INF: Z Motor: Arming to move to -0.0893 mm
17-02-28 20:15:32.940 -08 000000058 INF: FPGA: Xmit ZYT 6428460 4\n
17-02-28 20:15:32.998 -08 000000038 INF: FPGA: Recv ZYT 
17-02-28 20:15:32.998 -08 000000058 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483488 enc / 14.835 mm / ) = 6428460 enc / 64.285 mm
17-02-28 20:15:32.998 -08 000000058 INF: FPGA: Xmit ZARM 23421\n
17-02-28 20:15:33.000 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:33.000 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:15:33.000 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:33.020 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.020 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:15:33.058 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.063 -08 000000028 INF: FPGA: Recv ZARM
17-02-28 20:15:33.063 -08 000000058 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.5731 ms
17-02-28 20:15:33.063 -08 000000058 INF: Z Motor: ArmAbsStepped took 122.691 ms
17-02-28 20:15:33.063 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:33.064 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:15:33.065 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:33.065 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:33.065 -08 000000052 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:15:33.065 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.066 -08 000000058 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:33.067 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:33.068 -08 000000058 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:33.069 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:15:33.070 -08 000000058 INF: ======================================
17-02-28 20:15:33.163 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.169 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:15:33.189 -08 000000052 INF: Y Motor: Unshifted Position: 1070694
17-02-28 20:15:33.239 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.263 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.269 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:15:33.365 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.367 -08 000000095 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:33.367 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:33.367 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:33.380 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:33.382 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:33.384 -08 000000095 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:33.500 -08 000000052 INF: Y Motor: Unshifted Position: 1773492
17-02-28 20:15:33.550 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.562 -08 000000082 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:33.624 -08 000000082 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:33.624 -08 000000082 INF: X Motor: Moved to 20.5259 after 686 ms
17-02-28 20:15:33.624 -08 000000082 INF: ======================================
17-02-28 20:15:33.658 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:15:33.674 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:33.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 11 of 40 seconds left===================
17-02-28 20:15:33.813 -08 000000052 INF: Y Motor: Unshifted Position: 2577674
17-02-28 20:15:33.863 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:33.984 -08 000000095 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:33.984 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:33.984 -08 000000095 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:34.000 -08 000000095 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:34.002 -08 000000095 INF: ===================Camera Arm TDI===================
17-02-28 20:15:34.003 -08 000000095 INF: ======================================
17-02-28 20:15:34.004 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:34.006 -08 000000071 INF: ======================================
17-02-28 20:15:34.029 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.157 -08 000000052 INF: Y Motor: Unshifted Position: 3411809
17-02-28 20:15:34.207 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.331 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.468 -08 000000052 INF: Y Motor: Unshifted Position: 4195120
17-02-28 20:15:34.518 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.645 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:34.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 40 seconds left===================
17-02-28 20:15:34.783 -08 000000052 INF: Y Motor: Unshifted Position: 4975193
17-02-28 20:15:34.833 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:34.955 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:35.091 -08 000000052 INF: Y Motor: Unshifted Position: 5743893
17-02-28 20:15:35.141 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:35.270 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:35.405 -08 000000052 INF: Y Motor: Unshifted Position: 5948461
17-02-28 20:15:35.405 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:35.405 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:35.468 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:35.468 -08 000000052 INF: Y Motor: Moved to 64.4846 after 2403 ms
17-02-28 20:15:35.468 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:35.528 -08 000000052 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:35.528 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:35.528 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:35.592 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:35.592 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:35.592 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:35.652 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:35.717 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:35.779 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:35.779 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:35.779 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:35.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:35.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 9 of 40 seconds left===================
17-02-28 20:15:35.841 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:15:35.841 -08 000000052 INF: ======================================
17-02-28 20:15:35.842 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:15:35.843 -08 000000075 INF: ======================================
17-02-28 20:15:35.844 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:35.845 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:35.845 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:35.845 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:35.903 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:35.903 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:35.963 -08 000000037 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:35.963 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:35.963 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:35.964 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:36.025 -08 000000066 INF: FPGA: Recv TDIYERD 6448461
17-02-28 20:15:36.025 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448461 counts (64.485 mm)
17-02-28 20:15:36.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:36.026 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:36.027 -08 000000044 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:36.027 -08 000000079 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:36.027 -08 000000044 INF: ======================================
17-02-28 20:15:36.028 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:36.028 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:36.029 -08 000000079 INF: FPGA: Xmit TDIYPOS 6337535\n
17-02-28 20:15:36.087 -08 000000099 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:36.088 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:36.089 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:36.089 -08 000000079 INF: FPGA: Xmit TDIYARM3 139264 6428460 1 1\n
17-02-28 20:15:36.150 -08 000000010 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:36.150 -08 000000079 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:36.151 -08 000000079 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:36.152 -08 000000079 INF: ======================================
17-02-28 20:15:36.154 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:36.154 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:36.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.156 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.156 -08 000000030 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:36.156 -08 000000046 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:36.157 -08 000000030 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:36.157 -08 000000030 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:36.157 -08 000000030 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:36.157 -08 000000046 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:36.157 -08 000000030 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:36.157 -08 000000046 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:36.157 -08 000000046 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:36.158 -08 000000046 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:36.525 -08 000000047 INF: FPGA: Recv EX2MV
17-02-28 20:15:36.525 -08 000000047 INF: FPGA: Recv EX1MV
17-02-28 20:15:36.525 -08 000000046 INF: Excitation Filter 1: Moved -107 steps in 367.2226 ms
17-02-28 20:15:36.525 -08 000000030 INF: Excitation Filter 2: Moved -107 steps in 367.3978 ms
17-02-28 20:15:36.525 -08 000000030 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.6168 ms
17-02-28 20:15:36.525 -08 000000030 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.7104 ms
17-02-28 20:15:36.525 -08 000000046 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.4431 ms
17-02-28 20:15:36.525 -08 000000046 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.8537 ms
17-02-28 20:15:36.526 -08 000000030 INF: ======================================
17-02-28 20:15:36.526 -08 000000046 INF: ======================================
17-02-28 20:15:36.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:36.529 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:36.529 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:15:36.529 -08 000000082 INF: ===================FPGA Z Wait===================
17-02-28 20:15:36.529 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:36.529 -08 000000082 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:36.529 -08 000000066 INF: Y Motor: Moving to 14.8363 mm @6.500 mm/sec, started at 64.4846 mm
17-02-28 20:15:36.530 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:36.530 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:36.530 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:36.530 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:36.530 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:36.531 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:15:36.531 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:36.532 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.532 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.533 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.533 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.589 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.589 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:36.589 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:36.654 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.654 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:36.683 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.683 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.683 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.683 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Set target position to 983626 encoder counts
17-02-28 20:15:36.716 -08 000000066 INF: Y Motor: Xmit s r0xca 983626\r
17-02-28 20:15:36.778 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.778 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:15:36.778 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:36.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:36.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 8 of 40 seconds left===================
17-02-28 20:15:36.833 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.833 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:36.833 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.833 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:36.862 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:36.862 -08 000000066 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:36.862 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:36.915 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:36.916 -08 000000082 INF: ======================================
17-02-28 20:15:36.979 -08 000000066 INF: Y Motor: Unshifted Position: 5876852
17-02-28 20:15:36.983 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:36.983 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:36.983 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:36.983 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:36.983 -08 000000106 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:36.983 -08 000000037 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:37.029 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.149 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:37.149 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:37.149 -08 000000106 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:37.156 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:37.156 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:37.156 -08 000000037 INF: ===================Camera #0 Frame #11===================
17-02-28 20:15:37.164 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.292 -08 000000066 INF: Y Motor: Unshifted Position: 5673187
17-02-28 20:15:37.327 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:37.327 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:37.327 -08 000000106 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:37.332 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:37.332 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:37.332 -08 000000037 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:37.342 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.466 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.503 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:37.503 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:37.503 -08 000000037 INF: ===================Camera #0 Frame #24===================
17-02-28 20:15:37.505 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:15:37.505 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:15:37.505 -08 000000106 INF: ===================Camera #2 Frame #24===================
17-02-28 20:15:37.603 -08 000000066 INF: Y Motor: Unshifted Position: 5471039
17-02-28 20:15:37.653 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.683 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:37.683 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:37.683 -08 000000037 INF: ===================Camera #0 Frame #30===================
17-02-28 20:15:37.685 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:15:37.685 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:15:37.685 -08 000000106 INF: ===================Camera #2 Frame #30===================
17-02-28 20:15:37.780 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:37.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:37.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 7 of 40 seconds left===================
17-02-28 20:15:37.860 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:37.860 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:37.860 -08 000000037 INF: ===================Camera #0 Frame #37===================
17-02-28 20:15:37.864 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:15:37.864 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:15:37.864 -08 000000106 INF: ===================Camera #2 Frame #37===================
17-02-28 20:15:37.916 -08 000000066 INF: Y Motor: Unshifted Position: 5267590
17-02-28 20:15:37.966 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.032 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:15:38.032 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:15:38.032 -08 000000037 INF: ===================Camera #0 Frame #43===================
17-02-28 20:15:38.045 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:15:38.045 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:15:38.045 -08 000000106 INF: ===================Camera #2 Frame #44===================
17-02-28 20:15:38.090 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.207 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:38.207 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:38.207 -08 000000037 INF: ===================Camera #0 Frame #50===================
17-02-28 20:15:38.219 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:15:38.219 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:15:38.219 -08 000000106 INF: ===================Camera #2 Frame #50===================
17-02-28 20:15:38.230 -08 000000066 INF: Y Motor: Unshifted Position: 5063924
17-02-28 20:15:38.280 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.386 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:15:38.386 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:15:38.386 -08 000000037 INF: ===================Camera #0 Frame #56===================
17-02-28 20:15:38.398 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:15:38.398 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:15:38.398 -08 000000106 INF: ===================Camera #2 Frame #57===================
17-02-28 20:15:38.403 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.539 -08 000000066 INF: Y Motor: Unshifted Position: 4862427
17-02-28 20:15:38.564 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:38.564 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:38.564 -08 000000037 INF: ===================Camera #0 Frame #63===================
17-02-28 20:15:38.582 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:15:38.582 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:15:38.582 -08 000000106 INF: ===================Camera #2 Frame #63===================
17-02-28 20:15:38.589 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.716 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.745 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:15:38.745 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:15:38.745 -08 000000037 INF: ===================Camera #0 Frame #69===================
17-02-28 20:15:38.758 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:15:38.758 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:15:38.758 -08 000000106 INF: ===================Camera #2 Frame #70===================
17-02-28 20:15:38.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:38.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 6 of 40 seconds left===================
17-02-28 20:15:38.852 -08 000000066 INF: Y Motor: Unshifted Position: 4658763
17-02-28 20:15:38.902 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:38.913 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:15:38.913 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:15:38.913 -08 000000037 INF: ===================Camera #0 Frame #76===================
17-02-28 20:15:38.940 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:15:38.940 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:15:38.940 -08 000000106 INF: ===================Camera #2 Frame #77===================
17-02-28 20:15:39.026 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.085 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:15:39.085 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:15:39.085 -08 000000037 INF: ===================Camera #0 Frame #82===================
17-02-28 20:15:39.115 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:15:39.115 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:15:39.115 -08 000000106 INF: ===================Camera #2 Frame #83===================
17-02-28 20:15:39.165 -08 000000066 INF: Y Motor: Unshifted Position: 4455299
17-02-28 20:15:39.215 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.254 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:15:39.254 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:15:39.254 -08 000000037 INF: ===================Camera #0 Frame #88===================
17-02-28 20:15:39.285 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:15:39.285 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:15:39.285 -08 000000106 INF: ===================Camera #2 Frame #89===================
17-02-28 20:15:39.339 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.423 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:15:39.423 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:15:39.423 -08 000000037 INF: ===================Camera #0 Frame #94===================
17-02-28 20:15:39.454 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:15:39.454 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:15:39.454 -08 000000106 INF: ===================Camera #2 Frame #96===================
17-02-28 20:15:39.475 -08 000000066 INF: Y Motor: Unshifted Position: 4253588
17-02-28 20:15:39.525 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.592 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:15:39.592 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:15:39.592 -08 000000037 INF: ===================Camera #0 Frame #101===================
17-02-28 20:15:39.626 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:15:39.626 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:15:39.626 -08 000000106 INF: ===================Camera #2 Frame #102===================
17-02-28 20:15:39.650 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.763 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:15:39.763 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:15:39.763 -08 000000037 INF: ===================Camera #0 Frame #107===================
17-02-28 20:15:39.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:39.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 5 of 40 seconds left===================
17-02-28 20:15:39.791 -08 000000066 INF: Y Motor: Unshifted Position: 4049260
17-02-28 20:15:39.797 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:15:39.797 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:15:39.797 -08 000000106 INF: ===================Camera #2 Frame #108===================
17-02-28 20:15:39.841 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.931 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:15:39.931 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:15:39.931 -08 000000037 INF: ===================Camera #0 Frame #113===================
17-02-28 20:15:39.963 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:39.968 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:15:39.968 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:15:39.968 -08 000000106 INF: ===================Camera #2 Frame #114===================
17-02-28 20:15:40.099 -08 000000066 INF: Y Motor: Unshifted Position: 3842997
17-02-28 20:15:40.100 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:15:40.100 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:15:40.100 -08 000000037 INF: ===================Camera #0 Frame #119===================
17-02-28 20:15:40.138 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:15:40.138 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:15:40.138 -08 000000106 INF: ===================Camera #2 Frame #121===================
17-02-28 20:15:40.149 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.269 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:15:40.269 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:15:40.269 -08 000000037 INF: ===================Camera #0 Frame #126===================
17-02-28 20:15:40.276 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.311 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:15:40.311 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:15:40.311 -08 000000106 INF: ===================Camera #2 Frame #127===================
17-02-28 20:15:40.412 -08 000000066 INF: Y Motor: Unshifted Position: 3643004
17-02-28 20:15:40.441 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:15:40.441 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:15:40.444 -08 000000037 INF: ===================Camera #0 Frame #132===================
17-02-28 20:15:40.462 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.481 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:15:40.481 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:15:40.481 -08 000000106 INF: ===================Camera #2 Frame #133===================
17-02-28 20:15:40.586 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.612 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:15:40.612 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:15:40.612 -08 000000037 INF: ===================Camera #0 Frame #138===================
17-02-28 20:15:40.651 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:15:40.651 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:15:40.651 -08 000000106 INF: ===================Camera #2 Frame #140===================
17-02-28 20:15:40.725 -08 000000066 INF: Y Motor: Unshifted Position: 3439992
17-02-28 20:15:40.775 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.780 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:15:40.780 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:15:40.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:40.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 40 seconds left===================
17-02-28 20:15:40.780 -08 000000037 INF: ===================Camera #0 Frame #144===================
17-02-28 20:15:40.824 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:15:40.824 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:15:40.824 -08 000000106 INF: ===================Camera #2 Frame #146===================
17-02-28 20:15:40.900 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:40.949 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:15:40.949 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:15:40.949 -08 000000037 INF: ===================Camera #0 Frame #151===================
17-02-28 20:15:40.993 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:15:40.993 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:15:40.993 -08 000000106 INF: ===================Camera #2 Frame #152===================
17-02-28 20:15:41.035 -08 000000066 INF: Y Motor: Unshifted Position: 3238928
17-02-28 20:15:41.085 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.120 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:15:41.120 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:15:41.120 -08 000000037 INF: ===================Camera #0 Frame #157===================
17-02-28 20:15:41.162 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:15:41.162 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:15:41.162 -08 000000106 INF: ===================Camera #2 Frame #158===================
17-02-28 20:15:41.213 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.288 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:15:41.288 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:15:41.288 -08 000000037 INF: ===================Camera #0 Frame #163===================
17-02-28 20:15:41.331 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:15:41.331 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:15:41.331 -08 000000106 INF: ===================Camera #2 Frame #165===================
17-02-28 20:15:41.348 -08 000000066 INF: Y Motor: Unshifted Position: 3035484
17-02-28 20:15:41.398 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.456 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:15:41.456 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:15:41.456 -08 000000037 INF: ===================Camera #0 Frame #169===================
17-02-28 20:15:41.503 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:15:41.503 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:15:41.503 -08 000000106 INF: ===================Camera #2 Frame #171===================
17-02-28 20:15:41.522 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.624 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:15:41.624 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:15:41.624 -08 000000037 INF: ===================Camera #0 Frame #175===================
17-02-28 20:15:41.659 -08 000000066 INF: Y Motor: Unshifted Position: 2833337
17-02-28 20:15:41.672 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:15:41.672 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:15:41.672 -08 000000106 INF: ===================Camera #2 Frame #177===================
17-02-28 20:15:41.709 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:41.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 3 of 40 seconds left===================
17-02-28 20:15:41.793 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:15:41.793 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:15:41.793 -08 000000037 INF: ===================Camera #0 Frame #182===================
17-02-28 20:15:41.836 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:41.844 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:15:41.844 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:15:41.844 -08 000000106 INF: ===================Camera #2 Frame #183===================
17-02-28 20:15:41.964 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:15:41.964 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:15:41.964 -08 000000037 INF: ===================Camera #0 Frame #188===================
17-02-28 20:15:41.973 -08 000000066 INF: Y Motor: Unshifted Position: 2629026
17-02-28 20:15:42.013 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:15:42.013 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:15:42.013 -08 000000106 INF: ===================Camera #2 Frame #190===================
17-02-28 20:15:42.023 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.132 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:15:42.132 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:15:42.132 -08 000000037 INF: ===================Camera #0 Frame #194===================
17-02-28 20:15:42.146 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.185 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:15:42.185 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:15:42.185 -08 000000106 INF: ===================Camera #2 Frame #196===================
17-02-28 20:15:42.285 -08 000000066 INF: Y Motor: Unshifted Position: 2426006
17-02-28 20:15:42.300 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:15:42.300 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:15:42.300 -08 000000037 INF: ===================Camera #0 Frame #200===================
17-02-28 20:15:42.335 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.356 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:15:42.356 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:15:42.356 -08 000000106 INF: ===================Camera #2 Frame #202===================
17-02-28 20:15:42.459 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.468 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:15:42.468 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:15:42.468 -08 000000037 INF: ===================Camera #0 Frame #206===================
17-02-28 20:15:42.527 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:15:42.527 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:15:42.527 -08 000000106 INF: ===================Camera #2 Frame #209===================
17-02-28 20:15:42.595 -08 000000066 INF: Y Motor: Unshifted Position: 2224514
17-02-28 20:15:42.636 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:15:42.636 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:15:42.636 -08 000000037 INF: ===================Camera #0 Frame #213===================
17-02-28 20:15:42.645 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.701 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:15:42.701 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:15:42.701 -08 000000106 INF: ===================Camera #2 Frame #215===================
17-02-28 20:15:42.772 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:42.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 2 of 40 seconds left===================
17-02-28 20:15:42.807 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:15:42.807 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:15:42.807 -08 000000037 INF: ===================Camera #0 Frame #219===================
17-02-28 20:15:42.872 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:15:42.872 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:15:42.872 -08 000000106 INF: ===================Camera #2 Frame #221===================
17-02-28 20:15:42.910 -08 000000066 INF: Y Motor: Unshifted Position: 2020201
17-02-28 20:15:42.960 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:42.975 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:15:42.975 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:15:42.975 -08 000000037 INF: ===================Camera #0 Frame #225===================
17-02-28 20:15:43.041 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:15:43.041 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:15:43.041 -08 000000106 INF: ===================Camera #2 Frame #228===================
17-02-28 20:15:43.084 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.143 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:15:43.143 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:15:43.143 -08 000000037 INF: ===================Camera #0 Frame #231===================
17-02-28 20:15:43.213 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:15:43.213 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:15:43.213 -08 000000106 INF: ===================Camera #2 Frame #234===================
17-02-28 20:15:43.221 -08 000000066 INF: Y Motor: Unshifted Position: 1817390
17-02-28 20:15:43.271 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.311 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:15:43.311 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:15:43.311 -08 000000037 INF: ===================Camera #0 Frame #238===================
17-02-28 20:15:43.385 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:15:43.385 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:15:43.385 -08 000000106 INF: ===================Camera #2 Frame #240===================
17-02-28 20:15:43.396 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.482 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:15:43.482 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:15:43.482 -08 000000037 INF: ===================Camera #0 Frame #244===================
17-02-28 20:15:43.531 -08 000000066 INF: Y Motor: Unshifted Position: 1614596
17-02-28 20:15:43.556 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:15:43.556 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:15:43.556 -08 000000106 INF: ===================Camera #2 Frame #247===================
17-02-28 20:15:43.581 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.650 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:15:43.650 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:15:43.650 -08 000000037 INF: ===================Camera #0 Frame #250===================
17-02-28 20:15:43.708 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.731 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:15:43.731 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:15:43.731 -08 000000106 INF: ===================Camera #2 Frame #253===================
17-02-28 20:15:43.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:43.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 1 of 40 seconds left===================
17-02-28 20:15:43.819 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:15:43.819 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:15:43.819 -08 000000037 INF: ===================Camera #0 Frame #256===================
17-02-28 20:15:43.844 -08 000000066 INF: Y Motor: Unshifted Position: 1412218
17-02-28 20:15:43.894 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:43.902 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:15:43.902 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:15:43.902 -08 000000106 INF: ===================Camera #2 Frame #259===================
17-02-28 20:15:43.987 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:15:43.987 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:15:43.987 -08 000000037 INF: ===================Camera #0 Frame #262===================
17-02-28 20:15:44.018 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.073 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:15:44.073 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:15:44.073 -08 000000106 INF: ===================Camera #2 Frame #266===================
17-02-28 20:15:44.155 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:15:44.155 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:15:44.155 -08 000000037 INF: ===================Camera #0 Frame #269===================
17-02-28 20:15:44.158 -08 000000066 INF: Y Motor: Unshifted Position: 1210500
17-02-28 20:15:44.208 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.247 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:44.247 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:44.247 -08 000000106 INF: ===================Camera #2 Frame #272===================
17-02-28 20:15:44.266 -08 000000106 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:44.267 -08 000000106 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:44.280 -08 000000075 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:44.280 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:44.282 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:44.282 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:44.283 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:44.283 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:44.283 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:44.283 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:44.283 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:44.283 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:44.283 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:44.283 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:44.284 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:44.332 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.440 -08 000000106 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:44.440 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:15:44.440 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:15:44.440 -08 000000037 INF: ===================Camera #0 Frame #272===================
17-02-28 20:15:44.440 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:15:44.449 -08 000000037 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:15:44.450 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:44.468 -08 000000066 INF: Y Motor: Unshifted Position: 1006403
17-02-28 20:15:44.473 -08 000000106 INF: ======================================
17-02-28 20:15:44.518 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:44.585 -08 000000037 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:44.585 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:15:44.617 -08 000000037 INF: ======================================
17-02-28 20:15:44.618 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:15:44.619 -08 000000025 INF: ======================================
17-02-28 20:15:44.652 -08 000000028 INF: FPGA: Recv EX1MV
17-02-28 20:15:44.652 -08 000000028 INF: FPGA: Recv EX2MV
17-02-28 20:15:44.652 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 369.0493 ms
17-02-28 20:15:44.652 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 369.2755 ms
17-02-28 20:15:44.652 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.3983 ms
17-02-28 20:15:44.652 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.4694 ms
17-02-28 20:15:44.652 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.1573 ms
17-02-28 20:15:44.652 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.5694 ms
17-02-28 20:15:44.652 -08 000000032 INF: ======================================
17-02-28 20:15:44.653 -08 000000082 INF: ======================================
17-02-28 20:15:44.654 -08 000000066 INF: Y Motor: Unshifted Position: 983624
17-02-28 20:15:44.654 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:44.654 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:44.654 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:44.655 -08 000000045 INF: ======================================
17-02-28 20:15:44.716 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:44.716 -08 000000066 INF: Y Motor: Moved to 14.8362 after 7854 ms
17-02-28 20:15:44.716 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:44.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.779 -08 000000042 INF: WaitCommand(40000) end
17-02-28 20:15:44.779 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.780 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.780 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:44.782 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:44.782 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:44.782 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:44.840 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:44.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:15:44.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:44.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:15:44.841 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:44.841 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:44.841 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:44.906 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:44.968 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:45.030 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.030 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:45.030 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:45.093 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.093 -08 000000066 INF: ======================================
17-02-28 20:15:45.094 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:45.095 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:45.096 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.096 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:45.152 -08 000000023 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:45.152 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:45.216 -08 000000064 INF: FPGA: Recv TDIYERD 1483627
17-02-28 20:15:45.216 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:45.276 -08 000000074 INF: FPGA: Recv ZADCR 33658
17-02-28 20:15:45.276 -08 000000018 INF: At scan end Y pos = 14.836 and Z pos = -0.129. Y moved -48.539 mm
17-02-28 20:15:45.276 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:45.340 -08 000000071 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:15:45.341 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:15:45.341 -08 000000018 INF: TDIScan finished after 12671.3897 ms
17-02-28 20:15:45.341 -08 000000018 INF: Image[0]: Y should trigger at 63.375 mm, 2nd row was at 64.284 mm (error = 0.909 mm)
17-02-28 20:15:45.341 -08 000000018 INF: Image[2]: Y should trigger at 63.375 mm, 2nd row was at 64.284 mm (error = 0.909 mm)
17-02-28 20:15:45.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.375 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.814 um
17-02-28 20:15:45.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.376 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:45.404 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:45.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.405 -08 000000030 INF: ===================Dither Clean Up Command===================
17-02-28 20:15:45.405 -08 000000053 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:45.405 -08 000000099 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:45.405 -08 000000106 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:45.405 -08 000000099 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:45.405 -08 000000099 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:45.406 -08 000000053 INF: ======================================
17-02-28 20:15:45.406 -08 000000106 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:45.406 -08 000000084 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:45.406 -08 000000106 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:45.406 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:45.407 -08 000000084 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:15:45.409 -08 000000079 INF: ===================LFT:Extracting coords===================
17-02-28 20:15:45.435 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:45.435 -08 000000079 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:15:45.436 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.436 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.437 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.437 -08 000000025 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.437 -08 000000037 INF: ===================Lookup Focus Tracking===================
17-02-28 20:15:45.463 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:45.463 -08 000000101 INF: FPGA: Recv ZSEL 
17-02-28 20:15:45.463 -08 000000084 INF: FPGA: Xmit ZDACW 33907\n
17-02-28 20:15:45.463 -08 000000106 INF: ======================================
17-02-28 20:15:45.465 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.465 -08 000000099 INF: ======================================
17-02-28 20:15:45.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:45.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:45.466 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:45.511 -08 000000052 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.511 -08 000000095 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.511 -08 000000025 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.511 -08 000000037 INF: FC:A, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:15:45.528 -08 000000023 INF: FPGA: Recv ZDACW 
17-02-28 20:15:45.529 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:45.529 -08 000000084 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:15:45.529 -08 000000084 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:15:45.537 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 12, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:15:45.590 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:15:45.590 -08 000000084 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:15:45.591 -08 000000084 INF: ======================================
17-02-28 20:15:45.629 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:45.662 -08 000000052 INF: LFT found best fwhm score 2.000024 in 151 ms
17-02-28 20:15:45.662 -08 000000052 INF: LFT found good score at index 433 with fwhm value 2.000024. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000025 INF: LFT found best fwhm score 2.000745 in 151 ms
17-02-28 20:15:45.662 -08 000000025 INF: LFT found good score at index 5549 with fwhm value 2.000745. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000095 INF: LFT found best fwhm score 2.000118 in 151 ms
17-02-28 20:15:45.662 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.662 -08 000000095 INF: LFT found good score at index 3729 with fwhm value 2.000118. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000037 INF: LFT found best fwhm score 2.215148 in 151 ms
17-02-28 20:15:45.662 -08 000000037 INF: LFT found good score at index 0 with fwhm value 2.215148. Next cycle, cycle 4 starting Z position for top surface is at -0.132 mm FC:A, C:3,L:6,T
17-02-28 20:15:45.662 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.663 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.663 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:15:45.663 -08 000000052 INF: ======================================
17-02-28 20:15:45.663 -08 000000025 INF: ======================================
17-02-28 20:15:45.663 -08 000000095 INF: ======================================
17-02-28 20:15:45.663 -08 000000037 INF: ======================================
17-02-28 20:15:45.664 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:15:45.665 -08 000000079 INF: LFT weighted average best Z for top surface is at -0.132mm FC:A, C:3,L:6,T
17-02-28 20:15:45.665 -08 000000079 INF: ======================================
17-02-28 20:15:45.666 -08 000000030 INF: ======================================
17-02-28 20:15:45.667 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:45.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:45.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:45.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:45.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:15:45.670 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 20.51793 Y = 39.70011===================
17-02-28 20:15:45.671 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-02-28 20:15:45.671 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:45.694 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:15:45.694 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:45.694 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:45.694 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:15:45.694 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:45.695 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:15:45.695 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:15:45.719 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:45.720 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:45.721 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:45.721 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:45.734 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":6,"Tile":1201,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF280","HCSMMF222","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.745 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:15:45.745 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:15:45.781 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:45.782 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:45.782 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:15:45.783 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:15:45.892 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:15:45.893 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":6,"Tile":1202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF191","HCSMMF201","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.896 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":6,"Tile":1207,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF212","HCSMMF241","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.906 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":6,"Tile":1203,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF232","HCSMMF282","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.919 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":6,"Tile":1204,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF267","HCSMMF242","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.921 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":6,"Tile":1211,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF272","HCSMMF281","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.923 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":6,"Tile":1206,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF284","HCSMMF202","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.924 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":6,"Tile":1209,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF211","HCSMMF218","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.927 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":6,"Tile":1205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF220","HCSMMF240","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.929 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":6,"Tile":1208,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF198","HCSMMF253","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.930 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":6,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF228","HCSMMF259","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.932 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":6,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF217","HCSMMF216","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.942 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":6,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF249","HCSMMF273","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.945 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":6,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF229","HCSMMF209","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.948 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":6,"Tile":1210,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF183","HCSMMF287","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.953 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:45.959 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":6,"Tile":1216,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF258","HCSMMF196","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.970 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":6,"Tile":1218,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF236","HCSMMF178","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.975 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":6,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF213","HCSMMF180","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.979 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":6,"Tile":1217,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF286","HCSMMF194","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.982 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":6,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF197","HCSMMF193","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.985 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":6,"Tile":1224,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF252","HCSMMF199","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.988 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":6,"Tile":1222,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF187","HCSMMF279","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.993 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":6,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF205","HCSMMF246","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.995 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":6,"Tile":1220,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF239","HCSMMF262","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.995 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":6,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF185","HCSMMF210","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.996 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":6,"Tile":1223,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF257","HCSMMF248","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:45.997 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":6,"Tile":1225,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF223","HCSMMF181","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:46.000 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":6,"Tile":1226,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF244","HCSMMF200","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:15:46.019 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.025 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:15:46.054 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:46.128 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.128 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:15:46.136 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:46.165 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.170 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:15:46.198 -08 000000025 INF: FPGA: Recv MIOCOMPR
17-02-28 20:15:46.198 -08 000000018 INF: Compensator: Moved OutOfPath in 415 ms
17-02-28 20:15:46.198 -08 000000018 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:46.199 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.200 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.200 -08 000000044 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:46.200 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:46.200 -08 000000047 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:46.201 -08 000000064 INF: ======================================
17-02-28 20:15:46.201 -08 000000047 INF: ======================================
17-02-28 20:15:46.201 -08 000000044 INF: ======================================
17-02-28 20:15:46.202 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.203 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:46.209 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:15:46.217 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:15:46.218 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:46.218 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:15:46.218 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.218 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.221 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:15:46.222 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:15:46.222 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:15:46.260 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:46.260 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.261 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:46.261 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1293 mm
17-02-28 20:15:46.261 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:46.316 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.321 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:15:46.322 -08 000000025 INF: FPGA: Recv ZTRG 
17-02-28 20:15:46.322 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:46.387 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:46.387 -08 000000046 INF: FPGA: Recv ZYT 
17-02-28 20:15:46.387 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:46.387 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:15:46.422 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.427 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:15:46.449 -08 000000066 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:46.449 -08 000000066 INF: FPGA: Recv ZMV 
17-02-28 20:15:46.449 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:46.449 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.7386 ms
17-02-28 20:15:46.449 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:46.451 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:46.511 -08 000000079 INF: FPGA: Recv ZDACR 60292
17-02-28 20:15:46.511 -08 000000018 INF: Z Motor: MoveAndTrigger took 250.6526 ms w/comms
17-02-28 20:15:46.511 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:46.511 -08 000000018 INF: Z Motor: MoveAbsStepped took 250.8328 ms
17-02-28 20:15:46.512 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.512 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.521 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:15:46.521 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:15:46.531 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:15:46.551 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:15:46.573 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:46.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:46.593 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:15:46.601 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:15:46.601 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.601 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:15:46.603 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:46.604 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:46.604 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:46.604 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:15:46.604 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:46.605 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:46.605 -08 000000037 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:46.605 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:15:46.606 -08 000000098 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:46.606 -08 000000079 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:46.606 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:46.606 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:46.606 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:46.607 -08 000000032 INF: ===================Move X Motor without settling===================
17-02-28 20:15:46.607 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:46.607 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:46.607 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:46.608 -08 000000032 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:46.608 -08 000000060 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:46.608 -08 000000060 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8362 mm
17-02-28 20:15:46.608 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:46.608 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:46.608 -08 000000079 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:46.608 -08 000000099 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:46.608 -08 000000010 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:46.608 -08 000000084 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:46.609 -08 000000071 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:46.609 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:46.609 -08 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:46.609 -08 000000084 INF: ======================================
17-02-28 20:15:46.609 -08 000000010 INF: ======================================
17-02-28 20:15:46.609 -08 000000052 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:46.609 -08 000000106 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:46.609 -08 000000082 INF: ======================================
17-02-28 20:15:46.610 -08 000000071 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:46.610 -08 000000052 INF: ======================================
17-02-28 20:15:46.610 -08 000000071 INF: ======================================
17-02-28 20:15:46.610 -08 000000106 INF: ======================================
17-02-28 20:15:46.610 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:46.611 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:46.611 -08 000000099 INF: ======================================
17-02-28 20:15:46.612 -08 000000085 INF: ======================================
17-02-28 20:15:46.612 -08 000000064 INF: ======================================
17-02-28 20:15:46.612 -08 000000023 INF: ======================================
17-02-28 20:15:46.613 -08 000000039 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:46.614 -08 000000079 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:46.614 -08 000000039 INF: ======================================
17-02-28 20:15:46.615 -08 000000079 INF: ======================================
17-02-28 20:15:46.616 -08 000000037 INF: ======================================
17-02-28 20:15:46.637 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.637 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:46.637 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:46.637 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:46.637 -08 000000032 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:46.637 -08 000000032 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:46.700 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:46.700 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Moving to 22.7289 mm @15.000 mm/sec, started at 20.5259 mm
17-02-28 20:15:46.700 -08 000000032 INF: X Motor: Xmit MA -14857\n
17-02-28 20:15:46.737 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:46.762 -08 000000032 INF: X Motor: Recv MA -14857\r\n>
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:46.762 -08 000000032 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:15:46.762 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:15:46.762 -08 000000060 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:15:46.762 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:15:46.811 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:15:46.824 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.824 -08 000000060 INF: Y Motor: Start the move command
17-02-28 20:15:46.824 -08 000000060 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:46.862 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP2304R\r
17-02-28 20:15:46.889 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:46.889 -08 000000060 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:15:46.889 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:46.949 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.012 -08 000000060 INF: Y Motor: Unshifted Position: 1065109
17-02-28 20:15:47.049 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:47.062 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.134 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.186 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.327 -08 000000060 INF: Y Motor: Unshifted Position: 1783621
17-02-28 20:15:47.377 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.384 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:47.389 -08 000000032 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:47.449 -08 000000032 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:47.449 -08 000000032 INF: X Motor: Moved to 22.7280 after 687 ms
17-02-28 20:15:47.449 -08 000000032 INF: ======================================
17-02-28 20:15:47.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.499 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.637 -08 000000060 INF: Y Motor: Unshifted Position: 2551139
17-02-28 20:15:47.687 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.700 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:47.760 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:47.811 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:47.948 -08 000000060 INF: Y Motor: Unshifted Position: 3336919
17-02-28 20:15:47.998 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:48.071 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:48.122 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.260 -08 000000060 INF: Y Motor: Unshifted Position: 4116996
17-02-28 20:15:48.310 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:48.382 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:48.433 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.578 -08 000000060 INF: Y Motor: Unshifted Position: 4897758
17-02-28 20:15:48.628 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.632 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:48.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:48.746 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.882 -08 000000060 INF: Y Motor: Unshifted Position: 5673759
17-02-28 20:15:48.932 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:48.945 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.008 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.059 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:49.196 -08 000000060 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:15:49.196 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:49.196 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:49.258 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.258 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:49.258 -08 000000060 INF: Y Motor: Moved to 64.4706 after 2369 ms
17-02-28 20:15:49.258 -08 000000060 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:49.320 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.321 -08 000000060 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:49.321 -08 000000060 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:49.321 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:49.383 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:49.383 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:49.383 -08 000000060 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:49.445 -08 000000060 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:49.507 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:49.569 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:49.569 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:49.569 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:49.570 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.630 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.631 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:15:49.631 -08 000000060 INF: ======================================
17-02-28 20:15:49.632 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:15:49.633 -08 000000098 INF: ======================================
17-02-28 20:15:49.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:49.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:49.635 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:15:49.635 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:15:49.697 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:49.697 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:15:49.756 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:49.756 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:49.757 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:49.757 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:49.818 -08 000000051 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:15:49.818 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:15:49.819 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:49.819 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:49.820 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.820 -08 000000045 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:49.821 -08 000000045 INF: ======================================
17-02-28 20:15:49.821 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:49.822 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.823 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:49.824 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:49.824 -08 000000075 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:15:49.880 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:49.880 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:49.880 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:49.882 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:49.882 -08 000000075 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:15:49.941 -08 000000044 INF: FPGA: Recv TDIYARM2
17-02-28 20:15:49.941 -08 000000075 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:15:49.942 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:49.943 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.944 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:49.944 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:49.946 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:49.947 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:49.947 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:50.192 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:50.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:50.318 -08 000000075 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:50.318 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:50.318 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:50.333 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:50.335 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:50.506 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:50.566 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:50.712 -08 000000075 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:15:50.712 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:15:50.712 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:50.727 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:15:50.729 -08 000000075 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:15:50.730 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:50.731 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:50.732 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:50.733 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:50.734 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:50.734 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:50.734 -08 000000075 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:15:50.734 -08 000000075 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:15:50.752 -08 000000098 INF: FPGA: Recv ZYT 
17-02-28 20:15:50.752 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:15:50.752 -08 000000075 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:15:50.816 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:50.816 -08 000000074 INF: FPGA: Recv ZARM
17-02-28 20:15:50.816 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.6771 ms
17-02-28 20:15:50.816 -08 000000075 INF: Z Motor: ArmAbsStepped took 81.6239 ms
17-02-28 20:15:50.816 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:50.818 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:50.819 -08 000000075 INF: ======================================
17-02-28 20:15:50.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:50.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:50.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:50.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:50.822 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:50.823 -08 000000038 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:50.823 -08 000000038 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:50.823 -08 000000038 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:50.823 -08 000000038 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:50.823 -08 000000038 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:50.823 -08 000000051 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:50.823 -08 000000051 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:50.823 -08 000000051 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:50.824 -08 000000051 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:50.825 -08 000000051 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:50.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:51.129 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:51.192 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:51.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:51.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:51.193 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:15:51.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:15:51.252 -08 000000046 INF: FPGA: Recv EX1MV
17-02-28 20:15:51.252 -08 000000046 INF: FPGA: Recv EX2MV
17-02-28 20:15:51.252 -08 000000051 INF: Excitation Filter 2: Moved -107 steps in 428.5061 ms
17-02-28 20:15:51.252 -08 000000038 INF: Excitation Filter 1: Moved -107 steps in 428.9369 ms
17-02-28 20:15:51.252 -08 000000051 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 428.6582 ms
17-02-28 20:15:51.252 -08 000000051 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 428.7578 ms
17-02-28 20:15:51.252 -08 000000038 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.0429 ms
17-02-28 20:15:51.252 -08 000000038 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.2254 ms
17-02-28 20:15:51.253 -08 000000051 INF: ======================================
17-02-28 20:15:51.253 -08 000000038 INF: ======================================
17-02-28 20:15:51.254 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:51.256 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:51.257 -08 000000052 INF: ===================Serial===================
17-02-28 20:15:51.257 -08 000000079 INF: ===================Camera TDI===================
17-02-28 20:15:51.257 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:51.257 -08 000000090 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:15:51.257 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:51.258 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:51.258 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:51.258 -08 000000052 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:15:51.258 -08 000000052 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:51.258 -08 000000079 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:51.259 -08 000000060 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:51.259 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:15:51.259 -08 000000060 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:51.259 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:15:51.260 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.260 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.261 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.261 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.316 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.316 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:51.316 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:51.378 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.378 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:51.410 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.410 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.411 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.411 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:15:51.443 -08 000000090 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:15:51.505 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.505 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:15:51.505 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:51.560 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.560 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.561 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.561 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.567 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:51.567 -08 000000090 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:15:51.567 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:51.691 -08 000000090 INF: Y Motor: Unshifted Position: 5929083
17-02-28 20:15:51.710 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.710 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.711 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:51.711 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:51.741 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:51.860 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:51.860 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:51.860 -08 000000098 INF: ===================Camera #2 Frame #1===================
17-02-28 20:15:51.861 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:15:51.861 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:15:51.861 -08 000000039 INF: ===================Camera #0 Frame #1===================
17-02-28 20:15:51.865 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.004 -08 000000090 INF: Y Motor: Unshifted Position: 5882126
17-02-28 20:15:52.015 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:52.015 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:52.015 -08 000000098 INF: ===================Camera #2 Frame #3===================
17-02-28 20:15:52.016 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:15:52.016 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:15:52.016 -08 000000039 INF: ===================Camera #0 Frame #3===================
17-02-28 20:15:52.054 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.172 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:52.172 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:52.172 -08 000000098 INF: ===================Camera #2 Frame #4===================
17-02-28 20:15:52.175 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:15:52.175 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:15:52.175 -08 000000039 INF: ===================Camera #0 Frame #4===================
17-02-28 20:15:52.178 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:52.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:15:52.314 -08 000000090 INF: Y Motor: Unshifted Position: 5835572
17-02-28 20:15:52.325 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:52.325 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:52.325 -08 000000098 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:52.328 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:52.328 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:52.328 -08 000000039 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:52.364 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.377 -08 000000059 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:52.378 -08 000000052 INF: ===================Serial===================
17-02-28 20:15:52.379 -08 000000052 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:15:52.379 -08 000000052 INF: ===================Serial===================
17-02-28 20:15:52.381 -08 000000052 INF: ======================================
17-02-28 20:15:52.439 -08 000000066 INF: FPGA: Recv TDIYWAIT
17-02-28 20:15:52.439 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:52.441 -08 000000060 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:15:52.442 -08 000000075 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:15:52.442 -08 000000075 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:15:52.442 -08 000000075 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:15:52.442 -08 000000075 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:15:52.442 -08 000000075 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:15:52.442 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:15:52.443 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:15:52.443 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:15:52.443 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:15:52.444 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:15:52.478 -08 000000098 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:52.478 -08 000000098 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:52.478 -08 000000098 INF: ===================Camera #2 Frame #6===================
17-02-28 20:15:52.481 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:15:52.481 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:15:52.481 -08 000000039 INF: ===================Camera #0 Frame #6===================
17-02-28 20:15:52.482 -08 000000098 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:52.482 -08 000000098 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:52.484 -08 000000039 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:15:52.485 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:15:52.491 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.508 -08 000000098 INF: Camera #2 ReleaseBuffer
17-02-28 20:15:52.508 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:15:52.509 -08 000000098 INF: ======================================
17-02-28 20:15:52.533 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:15:52.533 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:15:52.534 -08 000000039 INF: ======================================
17-02-28 20:15:52.536 -08 000000079 INF: ===================Camera TDI===================
17-02-28 20:15:52.537 -08 000000079 INF: ======================================
17-02-28 20:15:52.627 -08 000000090 INF: Y Motor: Unshifted Position: 5790765
17-02-28 20:15:52.677 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:52.813 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:15:52.813 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:15:52.813 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 370.1172 ms
17-02-28 20:15:52.813 -08 000000075 INF: Excitation Filter 1: Moved 107 steps in 370.6395 ms
17-02-28 20:15:52.813 -08 000000075 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7475 ms
17-02-28 20:15:52.813 -08 000000075 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8251 ms
17-02-28 20:15:52.813 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.256 ms
17-02-28 20:15:52.813 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.6582 ms
17-02-28 20:15:52.813 -08 000000075 INF: ======================================
17-02-28 20:15:52.813 -08 000000051 INF: ======================================
17-02-28 20:15:52.815 -08 000000090 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:15:52.815 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:52.815 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:52.815 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:52.816 -08 000000060 INF: ======================================
17-02-28 20:15:52.876 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:52.876 -08 000000090 INF: Y Motor: Moved to 62.9074 after 1309 ms
17-02-28 20:15:52.876 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:52.938 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:15:52.938 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:52.938 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:53.003 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:53.003 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:53.003 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:53.067 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:53.128 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:53.189 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:53.189 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:53.189 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:53.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:53.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:15:53.251 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:15:53.251 -08 000000090 INF: ======================================
17-02-28 20:15:53.252 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:53.254 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:15:53.255 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.255 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:15:53.313 -08 000000038 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:15:53.314 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:53.374 -08 000000045 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:15:53.374 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:15:53.435 -08 000000066 INF: FPGA: Recv ZADCR 2426
17-02-28 20:15:53.435 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:15:53.435 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:15:53.500 -08 000000106 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:15:53.500 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:15:53.500 -08 000000018 INF: TDIScan finished after 6908.0097 ms
17-02-28 20:15:53.500 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:53.500 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:15:53.501 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:15:53.563 -08 000000068 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:15:53.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.565 -08 000000050 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:15:53.565 -08 000000028 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:15:53.565 -08 000000052 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:15:53.565 -08 000000050 INF: ======================================
17-02-28 20:15:53.565 -08 000000028 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:15:53.565 -08 000000028 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:15:53.566 -08 000000052 INF: ======================================
17-02-28 20:15:53.626 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:15:53.626 -08 000000028 INF: ======================================
17-02-28 20:15:53.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:15:53.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:15:53.709 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.709 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:15:53.739 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.740 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:15:53.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:15:53.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:53.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:53.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:15:53.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:53.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:15:53.773 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:15:54.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:54.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:15:54.410 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:15:54.434 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0624920783796801Best Z position at top surface = -0.132694111384319Best Z position at top surface + compensator offset = -0.109994111384319 C:3,L:7,T
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.132694111384319
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.78251
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0624920783796801
17-02-28 20:15:54.435 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.44441
17-02-28 20:15:54.435 -08 000000018 INF: Z-height at LaneTopSurface is -0.132694111384319.
17-02-28 20:15:54.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:54.568 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:15:54.568 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:15:54.622 -08 000000025 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:54.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:15:54.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.624 -08 000000018 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:15:54.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.626 -08 000000059 INF: ===================Move Tilt Motor 1===================
17-02-28 20:15:54.626 -08 000000023 INF: ===================Move Tilt Motor 2===================
17-02-28 20:15:54.626 -08 000000028 INF: ===================Move Tilt Motor 3===================
17-02-28 20:15:54.626 -08 000000023 INF: ======================================
17-02-28 20:15:54.626 -08 000000028 INF: ======================================
17-02-28 20:15:54.627 -08 000000059 INF: ======================================
17-02-28 20:15:54.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.629 -08 000000018 INF: ETF Best Z: -0.1099941 mm (28834 DAC)
17-02-28 20:15:54.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:54.630 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:15:54.630 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:15:55.031 -08 000000047 INF: FPGA: Recv MIOCOMPF
17-02-28 20:15:55.031 -08 000000018 INF: Compensator: Moved IntoPath in 401 ms
17-02-28 20:15:55.032 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:55.033 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:15:55.039 -08 000000018 INF: Swath 1 position calculated to be: {X=22.17493, Y=39.70011} from estimated center X= 22.652, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:55.039 -08 000000018 INF: Swath 2 position calculated to be: {X=23.28293, Y=39.70011} from estimated center X= 22.652, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:15:55.045 -08 000000018 INF: Swath 0: Converted transform from (64.31781, -13.83717) pixels to (0.02208, -0.00483) mm.
17-02-28 20:15:55.050 -08 000000018 INF: Swath 1: Converted transform from (47.2242, -10.16882) pixels to (0.016215, -0.00345) mm.
17-02-28 20:15:55.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:15:55.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:15:55.052 -08 000000018 INF: Transformed XStagePosition from 22.17493 mm to 22.1970105729997 mm.
17-02-28 20:15:55.063 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4852863330171 mm.
17-02-28 20:15:55.063 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2852863330171 mm.
17-02-28 20:15:55.063 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.376036333017 mm.
17-02-28 20:15:55.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:55.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:15:55.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:55.066 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:15:55.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:55.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:55.074 -08 000000050 INF: ===================MoveEmissionFilters===================
17-02-28 20:15:55.074 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:55.074 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:15:55.074 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:55.074 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:15:55.074 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:55.075 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:55.075 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-02-28 20:15:55.075 -08 000000071 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:55.075 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:55.075 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:55.075 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:15:55.075 -08 000000071 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:15:55.076 -08 000000064 INF: ===================Move X Motor without settling===================
17-02-28 20:15:55.076 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:55.076 -08 000000064 INF: X Motor: Xmit PR VM\n
17-02-28 20:15:55.076 -08 000000098 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:15:55.076 -08 000000038 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:15:55.076 -08 000000075 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:15:55.076 -08 000000095 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:15:55.076 -08 000000053 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:15:55.076 -08 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:15:55.076 -08 000000106 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:15:55.076 -08 000000098 INF: ======================================
17-02-28 20:15:55.077 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:15:55.077 -08 000000106 INF: ======================================
17-02-28 20:15:55.077 -08 000000095 INF: ======================================
17-02-28 20:15:55.077 -08 000000089 INF: ======================================
17-02-28 20:15:55.078 -08 000000053 INF: ======================================
17-02-28 20:15:55.078 -08 000000010 INF: ======================================
17-02-28 20:15:55.078 -08 000000075 INF: ======================================
17-02-28 20:15:55.078 -08 000000071 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:15:55.078 -08 000000046 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:15:55.078 -08 000000046 INF: Z Motor: Moving to -0.1300 mm, started at -0.0100 mm
17-02-28 20:15:55.078 -08 000000046 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:15:55.079 -08 000000030 INF: Y Motor: Moving to 64.4853 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:15:55.079 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:15:55.079 -08 000000038 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:15:55.079 -08 000000059 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:15:55.079 -08 000000071 INF: ======================================
17-02-28 20:15:55.080 -08 000000038 INF: ======================================
17-02-28 20:15:55.080 -08 000000051 INF: ======================================
17-02-28 20:15:55.080 -08 000000059 INF: ======================================
17-02-28 20:15:55.081 -08 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:15:55.082 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:55.082 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:55.082 -08 000000028 INF: ======================================
17-02-28 20:15:55.083 -08 000000050 INF: ======================================
17-02-28 20:15:55.152 -08 000000082 INF: FPGA: Recv ZTRG 
17-02-28 20:15:55.152 -08 000000046 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:15:55.154 -08 000000064 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:15:55.154 -08 000000064 INF: X Motor: Xmit PR VI\n
17-02-28 20:15:55.155 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.155 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:55.155 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:55.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:55.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:15:55.214 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:15:55.214 -08 000000046 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:15:55.214 -08 000000046 INF: FPGA: Xmit ZMV 34077\n
17-02-28 20:15:55.216 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.216 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Moving to 22.1970 mm @15.000 mm/sec, started at 22.7280 mm
17-02-28 20:15:55.217 -08 000000064 INF: X Motor: Xmit MA -15075\n
17-02-28 20:15:55.276 -08 000000071 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:15:55.276 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:15:55.278 -08 000000064 INF: X Motor: Recv MA -15075\r\n>
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:55.278 -08 000000064 INF: X Motor: WaitUntilStopped 60035
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Set target position to 5948529 encoder counts
17-02-28 20:15:55.278 -08 000000030 INF: Y Motor: Xmit s r0xca 5948529\r
17-02-28 20:15:55.343 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.343 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:15:55.343 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:55.403 -08 000000023 INF: FPGA: Recv ZMV 
17-02-28 20:15:55.403 -08 000000046 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.862 ms
17-02-28 20:15:55.403 -08 000000046 INF: FPGA: Xmit ZDACR\n
17-02-28 20:15:55.405 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:55.405 -08 000000030 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:15:55.405 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:55.465 -08 000000025 INF: FPGA: Recv ZDACR 34077
17-02-28 20:15:55.465 -08 000000046 INF: Z Motor: MoveAndTrigger took 386.6525 ms w/comms
17-02-28 20:15:55.465 -08 000000046 INF: Z Motor: After move to -0.1300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:15:55.465 -08 000000046 INF: Z Motor: MoveAbsStepped took 386.8331 ms
17-02-28 20:15:55.465 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:55.467 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:15:55.468 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.468 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:15:55.468 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.469 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:55.469 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:55.469 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:55.470 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:55.470 -08 000000075 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:15:55.527 -08 000000038 INF: FPGA: Recv ZSEL 
17-02-28 20:15:55.528 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:55.528 -08 000000075 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:15:55.529 -08 000000030 INF: Y Motor: Unshifted Position: 5871800
17-02-28 20:15:55.579 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:55.589 -08 000000074 INF: FPGA: Recv TDIBB
17-02-28 20:15:55.589 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:15:55.590 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:15:55.591 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.592 -08 000000075 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:15:55.592 -08 000000075 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:15:55.592 -08 000000075 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:15:55.651 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:15:55.651 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.653 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:15:55.654 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.655 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:15:55.655 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:15:55.655 -08 000000075 INF: Z Motor: Arming to move to -0.0900 mm
17-02-28 20:15:55.655 -08 000000075 INF: FPGA: Xmit ZYT 6428529 4\n
17-02-28 20:15:55.703 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:55.713 -08 000000106 INF: FPGA: Recv ZYT 
17-02-28 20:15:55.713 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6371800 enc / 63.718 mm / ) = 6428529 enc / 64.285 mm
17-02-28 20:15:55.713 -08 000000075 INF: FPGA: Xmit ZARM 23591\n
17-02-28 20:15:55.715 -08 000000064 INF: X Motor: Xmit PR ER\n
17-02-28 20:15:55.775 -08 000000098 INF: FPGA: Recv ZARM
17-02-28 20:15:55.775 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.6683 ms
17-02-28 20:15:55.775 -08 000000075 INF: Z Motor: ArmAbsStepped took 119.3984 ms
17-02-28 20:15:55.775 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:15:55.777 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.778 -08 000000064 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:15:55.778 -08 000000064 INF: X Motor: Moved to 22.1958 after 499 ms
17-02-28 20:15:55.778 -08 000000064 INF: ======================================
17-02-28 20:15:55.778 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:15:55.779 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.780 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:15:55.781 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:15:55.782 -08 000000075 INF: ======================================
17-02-28 20:15:55.842 -08 000000030 INF: Y Motor: Unshifted Position: 5948529
17-02-28 20:15:55.842 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:15:55.842 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:55.904 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:55.904 -08 000000030 INF: Y Motor: Moved to 64.4853 after 498 ms
17-02-28 20:15:55.904 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:15:55.966 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:15:55.966 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:15:55.966 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:56.028 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:56.028 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:56.028 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:15:56.089 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:15:56.154 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:56.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:56.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:56.194 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:15:56.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:56.216 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:56.216 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:15:56.216 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:56.279 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:15:56.279 -08 000000030 INF: ======================================
17-02-28 20:15:56.280 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:15:56.281 -08 000000032 INF: ======================================
17-02-28 20:15:56.293 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:56.340 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:15:56.340 -08 000000042 INF: Current Position of Pump is: 2304
17-02-28 20:15:56.396 -08 000000084 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:56.396 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:56.396 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:56.411 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:56.413 -08 000000084 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:15:56.433 -08 000000050 INF: RunCopyService queue size at 2/28/2017 8:15:56 PM is 2
17-02-28 20:15:56.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:15:56.528 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:15:56.528 -08 000000042 INF: Current Position of Pump is: 2304
17-02-28 20:15:56.528 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:15:56.628 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD2304R\r
17-02-28 20:15:56.714 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:56.814 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:56.900 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:57.150 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:57.214 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:57.464 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:57.468 -08 000000084 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:15:57.468 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:15:57.468 -08 000000084 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:15:57.484 -08 000000084 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:15:57.486 -08 000000084 INF: ===================Camera Arm TDI===================
17-02-28 20:15:57.487 -08 000000084 INF: ======================================
17-02-28 20:15:57.488 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:15:57.489 -08 000000046 INF: ======================================
17-02-28 20:15:57.490 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:15:57.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:57.491 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:15:57.491 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:15:57.524 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:57.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:15:57.524 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:15:57.525 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:15:57.525 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:15:57.590 -08 000000038 INF: FPGA: Recv ZFREQCL
17-02-28 20:15:57.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:15:57.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:57.591 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:15:57.650 -08 000000010 INF: FPGA: Recv TDIYERD 6448531
17-02-28 20:15:57.650 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448531 counts (64.485 mm)
17-02-28 20:15:57.650 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:57.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:57.652 -08 000000037 INF: ===================Set YMotor gains for scans===================
17-02-28 20:15:57.652 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:57.652 -08 000000037 INF: ======================================
17-02-28 20:15:57.652 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:57.653 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:15:57.653 -08 000000053 INF: FPGA: Xmit TDIYPOS 6337604\n
17-02-28 20:15:57.712 -08 000000099 INF: FPGA: Recv TDIYPOS
17-02-28 20:15:57.712 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:57.714 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:15:57.714 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6428529 1 1\n
17-02-28 20:15:57.774 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:15:57.774 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:15:57.775 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:15:57.776 -08 000000053 INF: ======================================
17-02-28 20:15:57.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:15:57.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:15:57.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:57.778 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:57.779 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:57.780 -08 000000084 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:15:57.780 -08 000000059 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:15:57.780 -08 000000084 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:15:57.780 -08 000000084 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:15:57.780 -08 000000084 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:15:57.780 -08 000000059 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:15:57.780 -08 000000059 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:15:57.780 -08 000000059 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:15:57.780 -08 000000084 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:15:57.781 -08 000000059 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:15:58.149 -08 000000089 INF: FPGA: Recv EX1MV
17-02-28 20:15:58.149 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:15:58.149 -08 000000059 INF: Excitation Filter 2: Moved -107 steps in 368.8486 ms
17-02-28 20:15:58.149 -08 000000084 INF: Excitation Filter 1: Moved -107 steps in 368.9569 ms
17-02-28 20:15:58.149 -08 000000059 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.9402 ms
17-02-28 20:15:58.149 -08 000000059 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.1318 ms
17-02-28 20:15:58.149 -08 000000084 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.077 ms
17-02-28 20:15:58.149 -08 000000084 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.4618 ms
17-02-28 20:15:58.150 -08 000000059 INF: ======================================
17-02-28 20:15:58.150 -08 000000084 INF: ======================================
17-02-28 20:15:58.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:58.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:15:58.153 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:15:58.153 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:15:58.153 -08 000000046 INF: ===================Move Y Motor without settling===================
17-02-28 20:15:58.153 -08 000000038 INF: ===================FPGA Z Wait===================
17-02-28 20:15:58.153 -08 000000046 INF: Y Motor: Moving to 14.8369 mm @6.500 mm/sec, started at 64.4853 mm
17-02-28 20:15:58.153 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:15:58.153 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:15:58.153 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:15:58.153 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:15:58.153 -08 000000010 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:15:58.154 -08 000000010 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:15:58.154 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:15:58.154 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:15:58.156 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.156 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.156 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.156 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.213 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.213 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:15:58.213 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:15:58.275 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.275 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:15:58.306 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.306 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.306 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.306 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Set target position to 983695 encoder counts
17-02-28 20:15:58.337 -08 000000046 INF: Y Motor: Xmit s r0xca 983695\r
17-02-28 20:15:58.399 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.399 -08 000000046 INF: Y Motor: Start the move command
17-02-28 20:15:58.399 -08 000000046 INF: Y Motor: Xmit t 1\r
17-02-28 20:15:58.456 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.456 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.456 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:15:58.456 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:15:58.461 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:15:58.461 -08 000000046 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:15:58.461 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:58.524 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:15:58.524 -08 000000038 INF: ======================================
17-02-28 20:15:58.590 -08 000000046 INF: Y Motor: Unshifted Position: 5884720
17-02-28 20:15:58.606 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:58.606 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:58.606 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:15:58.606 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:15:58.606 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:15:58.606 -08 000000051 INF: ===================Camera #0 Frame #5===================
17-02-28 20:15:58.624 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:15:58.640 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:58.713 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:58.764 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:58.771 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:58.771 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:58.771 -08 000000051 INF: ===================Camera #0 Frame #11===================
17-02-28 20:15:58.772 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:15:58.772 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:15:58.772 -08 000000064 INF: ===================Camera #2 Frame #11===================
17-02-28 20:15:58.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:58.897 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:15:58.899 -08 000000046 INF: Y Motor: Unshifted Position: 5683224
17-02-28 20:15:58.939 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:58.939 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:58.939 -08 000000051 INF: ===================Camera #0 Frame #17===================
17-02-28 20:15:58.941 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:15:58.941 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:15:58.941 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:15:58.949 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.075 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.107 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:59.107 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:59.107 -08 000000051 INF: ===================Camera #0 Frame #23===================
17-02-28 20:15:59.110 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:15:59.110 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:15:59.110 -08 000000064 INF: ===================Camera #2 Frame #23===================
17-02-28 20:15:59.147 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:15:59.213 -08 000000046 INF: Y Motor: Unshifted Position: 5478917
17-02-28 20:15:59.213 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:15:59.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:15:59.263 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.275 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:15:59.275 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:15:59.275 -08 000000051 INF: ===================Camera #0 Frame #29===================
17-02-28 20:15:59.279 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:15:59.279 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:15:59.279 -08 000000064 INF: ===================Camera #2 Frame #29===================
17-02-28 20:15:59.386 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.443 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:15:59.443 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:15:59.443 -08 000000051 INF: ===================Camera #0 Frame #35===================
17-02-28 20:15:59.448 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:15:59.448 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:15:59.448 -08 000000064 INF: ===================Camera #2 Frame #36===================
17-02-28 20:15:59.522 -08 000000046 INF: Y Motor: Unshifted Position: 5277408
17-02-28 20:15:59.572 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:15:59.582 -08 000000042 INF: WaitCommand(30000) start
17-02-28 20:15:59.582 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 30 of 30 seconds left===================
17-02-28 20:15:59.611 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:59.611 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:59.611 -08 000000051 INF: ===================Camera #0 Frame #42===================
17-02-28 20:15:59.621 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:15:59.621 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:15:59.621 -08 000000064 INF: ===================Camera #2 Frame #42===================
17-02-28 20:15:59.699 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.783 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:15:59.783 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:15:59.783 -08 000000051 INF: ===================Camera #0 Frame #48===================
17-02-28 20:15:59.791 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:15:59.791 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:15:59.791 -08 000000064 INF: ===================Camera #2 Frame #48===================
17-02-28 20:15:59.835 -08 000000046 INF: Y Motor: Unshifted Position: 5073744
17-02-28 20:15:59.885 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:15:59.952 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:15:59.952 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:15:59.952 -08 000000051 INF: ===================Camera #0 Frame #54===================
17-02-28 20:15:59.962 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:15:59.962 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:15:59.962 -08 000000064 INF: ===================Camera #2 Frame #55===================
17-02-28 20:16:00.009 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.121 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:16:00.121 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:16:00.121 -08 000000051 INF: ===================Camera #0 Frame #60===================
17-02-28 20:16:00.135 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:16:00.135 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:16:00.135 -08 000000064 INF: ===================Camera #2 Frame #61===================
17-02-28 20:16:00.146 -08 000000046 INF: Y Motor: Unshifted Position: 4870298
17-02-28 20:16:00.196 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.290 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:00.290 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:00.290 -08 000000051 INF: ===================Camera #0 Frame #67===================
17-02-28 20:16:00.305 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:00.305 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:00.305 -08 000000064 INF: ===================Camera #2 Frame #67===================
17-02-28 20:16:00.323 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.461 -08 000000046 INF: Y Motor: Unshifted Position: 4667279
17-02-28 20:16:00.462 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:16:00.462 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:16:00.462 -08 000000051 INF: ===================Camera #0 Frame #73===================
17-02-28 20:16:00.475 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:16:00.475 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:16:00.475 -08 000000064 INF: ===================Camera #2 Frame #73===================
17-02-28 20:16:00.511 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:00.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 29 of 30 seconds left===================
17-02-28 20:16:00.631 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:16:00.631 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:16:00.631 -08 000000051 INF: ===================Camera #0 Frame #79===================
17-02-28 20:16:00.635 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.645 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:16:00.645 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:16:00.645 -08 000000064 INF: ===================Camera #2 Frame #80===================
17-02-28 20:16:00.772 -08 000000046 INF: Y Motor: Unshifted Position: 4464464
17-02-28 20:16:00.800 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:16:00.800 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:16:00.800 -08 000000051 INF: ===================Camera #0 Frame #85===================
17-02-28 20:16:00.819 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:16:00.819 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:16:00.819 -08 000000064 INF: ===================Camera #2 Frame #86===================
17-02-28 20:16:00.822 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.946 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:00.970 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:16:00.970 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:16:00.970 -08 000000051 INF: ===================Camera #0 Frame #92===================
17-02-28 20:16:00.990 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:16:00.990 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:16:00.990 -08 000000064 INF: ===================Camera #2 Frame #92===================
17-02-28 20:16:01.082 -08 000000046 INF: Y Motor: Unshifted Position: 4262755
17-02-28 20:16:01.132 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.143 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:16:01.143 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:16:01.143 -08 000000051 INF: ===================Camera #0 Frame #98===================
17-02-28 20:16:01.161 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:16:01.161 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:16:01.161 -08 000000064 INF: ===================Camera #2 Frame #99===================
17-02-28 20:16:01.261 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.313 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:16:01.313 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:16:01.313 -08 000000051 INF: ===================Camera #0 Frame #104===================
17-02-28 20:16:01.335 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:16:01.335 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:16:01.335 -08 000000064 INF: ===================Camera #2 Frame #105===================
17-02-28 20:16:01.395 -08 000000046 INF: Y Motor: Unshifted Position: 4059296
17-02-28 20:16:01.445 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.483 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:16:01.483 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:16:01.483 -08 000000051 INF: ===================Camera #0 Frame #111===================
17-02-28 20:16:01.506 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:16:01.506 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:16:01.506 -08 000000064 INF: ===================Camera #2 Frame #111===================
17-02-28 20:16:01.569 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:01.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 28 of 30 seconds left===================
17-02-28 20:16:01.656 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:16:01.656 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:16:01.656 -08 000000051 INF: ===================Camera #0 Frame #117===================
17-02-28 20:16:01.677 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:16:01.677 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:16:01.677 -08 000000064 INF: ===================Camera #2 Frame #118===================
17-02-28 20:16:01.708 -08 000000046 INF: Y Motor: Unshifted Position: 3854981
17-02-28 20:16:01.758 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.826 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:16:01.826 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:16:01.826 -08 000000051 INF: ===================Camera #0 Frame #123===================
17-02-28 20:16:01.851 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:16:01.851 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:16:01.851 -08 000000064 INF: ===================Camera #2 Frame #124===================
17-02-28 20:16:01.883 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:01.994 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:16:01.994 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:16:01.994 -08 000000051 INF: ===================Camera #0 Frame #129===================
17-02-28 20:16:02.018 -08 000000046 INF: Y Motor: Unshifted Position: 3652829
17-02-28 20:16:02.022 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:16:02.022 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:16:02.022 -08 000000064 INF: ===================Camera #2 Frame #130===================
17-02-28 20:16:02.068 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.164 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:16:02.164 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:16:02.164 -08 000000051 INF: ===================Camera #0 Frame #136===================
17-02-28 20:16:02.193 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:16:02.193 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:16:02.193 -08 000000064 INF: ===================Camera #2 Frame #137===================
17-02-28 20:16:02.195 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.330 -08 000000046 INF: Y Motor: Unshifted Position: 3451111
17-02-28 20:16:02.337 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:16:02.337 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:16:02.337 -08 000000051 INF: ===================Camera #0 Frame #142===================
17-02-28 20:16:02.367 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:16:02.367 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:16:02.367 -08 000000064 INF: ===================Camera #2 Frame #143===================
17-02-28 20:16:02.380 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.507 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.507 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:16:02.507 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:16:02.507 -08 000000051 INF: ===================Camera #0 Frame #148===================
17-02-28 20:16:02.538 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:16:02.538 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:16:02.538 -08 000000064 INF: ===================Camera #2 Frame #149===================
17-02-28 20:16:02.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:02.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 27 of 30 seconds left===================
17-02-28 20:16:02.643 -08 000000046 INF: Y Motor: Unshifted Position: 3247660
17-02-28 20:16:02.677 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:16:02.677 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:16:02.677 -08 000000051 INF: ===================Camera #0 Frame #154===================
17-02-28 20:16:02.693 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.709 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:16:02.709 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:16:02.709 -08 000000064 INF: ===================Camera #2 Frame #156===================
17-02-28 20:16:02.817 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:02.847 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:16:02.847 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:16:02.847 -08 000000051 INF: ===================Camera #0 Frame #161===================
17-02-28 20:16:02.883 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:16:02.883 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:16:02.883 -08 000000064 INF: ===================Camera #2 Frame #162===================
17-02-28 20:16:02.956 -08 000000046 INF: Y Motor: Unshifted Position: 3044007
17-02-28 20:16:03.006 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.020 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:16:03.020 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:16:03.020 -08 000000051 INF: ===================Camera #0 Frame #167===================
17-02-28 20:16:03.054 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:16:03.054 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:16:03.054 -08 000000064 INF: ===================Camera #2 Frame #168===================
17-02-28 20:16:03.132 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.190 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:16:03.190 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:16:03.190 -08 000000051 INF: ===================Camera #0 Frame #173===================
17-02-28 20:16:03.225 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:16:03.225 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:16:03.225 -08 000000064 INF: ===================Camera #2 Frame #175===================
17-02-28 20:16:03.271 -08 000000046 INF: Y Motor: Unshifted Position: 2841209
17-02-28 20:16:03.321 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.360 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:16:03.360 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:16:03.360 -08 000000051 INF: ===================Camera #0 Frame #180===================
17-02-28 20:16:03.399 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:16:03.399 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:16:03.399 -08 000000064 INF: ===================Camera #2 Frame #181===================
17-02-28 20:16:03.442 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.533 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:16:03.533 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:16:03.533 -08 000000051 INF: ===================Camera #0 Frame #186===================
17-02-28 20:16:03.570 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:16:03.570 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:16:03.570 -08 000000064 INF: ===================Camera #2 Frame #187===================
17-02-28 20:16:03.580 -08 000000046 INF: Y Motor: Unshifted Position: 2639487
17-02-28 20:16:03.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:03.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 26 of 30 seconds left===================
17-02-28 20:16:03.630 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.703 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:16:03.703 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:16:03.703 -08 000000051 INF: ===================Camera #0 Frame #192===================
17-02-28 20:16:03.741 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:03.741 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:03.741 -08 000000064 INF: ===================Camera #2 Frame #194===================
17-02-28 20:16:03.755 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:03.871 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:16:03.871 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:16:03.871 -08 000000051 INF: ===================Camera #0 Frame #198===================
17-02-28 20:16:03.891 -08 000000046 INF: Y Motor: Unshifted Position: 2434748
17-02-28 20:16:03.915 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:16:03.915 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:16:03.915 -08 000000064 INF: ===================Camera #2 Frame #200===================
17-02-28 20:16:03.941 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.041 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:16:04.041 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:16:04.041 -08 000000051 INF: ===================Camera #0 Frame #205===================
17-02-28 20:16:04.065 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.086 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:16:04.086 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:16:04.086 -08 000000064 INF: ===================Camera #2 Frame #206===================
17-02-28 20:16:04.202 -08 000000046 INF: Y Motor: Unshifted Position: 2234329
17-02-28 20:16:04.214 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:16:04.214 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:16:04.214 -08 000000051 INF: ===================Camera #0 Frame #211===================
17-02-28 20:16:04.252 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.255 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:16:04.255 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:16:04.255 -08 000000064 INF: ===================Camera #2 Frame #213===================
17-02-28 20:16:04.379 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.384 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:16:04.384 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:16:04.384 -08 000000051 INF: ===================Camera #0 Frame #217===================
17-02-28 20:16:04.430 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:16:04.430 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:16:04.430 -08 000000064 INF: ===================Camera #2 Frame #219===================
17-02-28 20:16:04.515 -08 000000046 INF: Y Motor: Unshifted Position: 2030228
17-02-28 20:16:04.554 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:16:04.554 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:16:04.554 -08 000000051 INF: ===================Camera #0 Frame #224===================
17-02-28 20:16:04.565 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:04.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 25 of 30 seconds left===================
17-02-28 20:16:04.601 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:04.601 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:16:04.601 -08 000000064 INF: ===================Camera #2 Frame #225===================
17-02-28 20:16:04.689 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.727 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:16:04.727 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:16:04.727 -08 000000051 INF: ===================Camera #0 Frame #230===================
17-02-28 20:16:04.772 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:16:04.772 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:16:04.772 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:16:04.829 -08 000000046 INF: Y Motor: Unshifted Position: 1828507
17-02-28 20:16:04.879 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:04.897 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:16:04.897 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:16:04.897 -08 000000051 INF: ===================Camera #0 Frame #236===================
17-02-28 20:16:04.946 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:16:04.946 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:16:04.946 -08 000000064 INF: ===================Camera #2 Frame #238===================
17-02-28 20:16:05.003 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.067 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:16:05.067 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:16:05.067 -08 000000051 INF: ===================Camera #0 Frame #242===================
17-02-28 20:16:05.117 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:16:05.117 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:16:05.117 -08 000000064 INF: ===================Camera #2 Frame #244===================
17-02-28 20:16:05.139 -08 000000046 INF: Y Motor: Unshifted Position: 1624412
17-02-28 20:16:05.189 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.237 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:16:05.237 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:16:05.237 -08 000000051 INF: ===================Camera #0 Frame #249===================
17-02-28 20:16:05.288 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:16:05.288 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:16:05.288 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:16:05.315 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.410 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:16:05.410 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:16:05.410 -08 000000051 INF: ===================Camera #0 Frame #255===================
17-02-28 20:16:05.451 -08 000000046 INF: Y Motor: Unshifted Position: 1421385
17-02-28 20:16:05.462 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:16:05.462 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:16:05.462 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:16:05.501 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.580 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:16:05.580 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:16:05.580 -08 000000051 INF: ===================Camera #0 Frame #261===================
17-02-28 20:16:05.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:05.583 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 24 of 30 seconds left===================
17-02-28 20:16:05.626 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.633 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:16:05.633 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:16:05.633 -08 000000064 INF: ===================Camera #2 Frame #263===================
17-02-28 20:16:05.749 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:16:05.749 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:16:05.749 -08 000000051 INF: ===================Camera #0 Frame #268===================
17-02-28 20:16:05.765 -08 000000046 INF: Y Motor: Unshifted Position: 1219882
17-02-28 20:16:05.804 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:16:05.804 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:16:05.804 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:16:05.815 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:05.887 -08 000000050 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:05.887 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:05.889 -08 000000010 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:05.890 -08 000000044 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:05.890 -08 000000052 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:05.890 -08 000000044 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:05.890 -08 000000044 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:05.890 -08 000000044 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:05.890 -08 000000044 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:05.890 -08 000000052 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:05.890 -08 000000052 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:05.890 -08 000000052 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:05.891 -08 000000052 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:05.921 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:05.921 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:05.921 -08 000000051 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:05.934 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:05.935 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:05.939 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:06.075 -08 000000046 INF: Y Motor: Unshifted Position: 1015570
17-02-28 20:16:06.097 -08 000000051 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:06.097 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:06.097 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:06.097 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:06.097 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:16:06.103 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:06.104 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:06.125 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:06.129 -08 000000051 INF: ======================================
17-02-28 20:16:06.262 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:16:06.262 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:16:06.262 -08 000000052 INF: Excitation Filter 2: Moved 107 steps in 371.0452 ms
17-02-28 20:16:06.262 -08 000000044 INF: Excitation Filter 1: Moved 107 steps in 371.2508 ms
17-02-28 20:16:06.262 -08 000000044 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.3957 ms
17-02-28 20:16:06.262 -08 000000044 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.463 ms
17-02-28 20:16:06.262 -08 000000052 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1528 ms
17-02-28 20:16:06.262 -08 000000052 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.5249 ms
17-02-28 20:16:06.263 -08 000000044 INF: ======================================
17-02-28 20:16:06.263 -08 000000052 INF: ======================================
17-02-28 20:16:06.264 -08 000000046 INF: Y Motor: Unshifted Position: 983693
17-02-28 20:16:06.264 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:06.264 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:06.264 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:06.265 -08 000000010 INF: ======================================
17-02-28 20:16:06.305 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:06.305 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:16:06.326 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:16:06.326 -08 000000046 INF: Y Motor: Moved to 14.8369 after 7864 ms
17-02-28 20:16:06.326 -08 000000046 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:06.340 -08 000000064 INF: ======================================
17-02-28 20:16:06.341 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:16:06.342 -08 000000047 INF: ======================================
17-02-28 20:16:06.388 -08 000000046 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:06.388 -08 000000046 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:06.388 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:06.450 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:16:06.450 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:06.450 -08 000000046 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:06.512 -08 000000046 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:06.574 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:06.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:06.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left===================
17-02-28 20:16:06.636 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:16:06.636 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:06.636 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:06.702 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:16:06.702 -08 000000046 INF: ======================================
17-02-28 20:16:06.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:06.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:06.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:06.705 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:06.759 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:06.759 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:06.824 -08 000000053 INF: FPGA: Recv TDIYERD 1483695
17-02-28 20:16:06.824 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:06.886 -08 000000047 INF: FPGA: Recv ZADCR 34120
17-02-28 20:16:06.886 -08 000000018 INF: At scan end Y pos = 14.837 and Z pos = -0.131. Y moved -48.539 mm
17-02-28 20:16:06.886 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:06.949 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:06.949 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:06.949 -08 000000018 INF: TDIScan finished after 11895.9656 ms
17-02-28 20:16:06.949 -08 000000018 INF: Image[0]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:16:06.949 -08 000000018 INF: Image[2]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:16:06.951 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:06.985 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.764 um
17-02-28 20:16:06.985 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:06.986 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:07.010 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:07.010 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.011 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:07.011 -08 000000030 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:07.011 -08 000000084 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:07.011 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:07.012 -08 000000025 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:07.012 -08 000000030 INF: ======================================
17-02-28 20:16:07.012 -08 000000025 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:07.012 -08 000000084 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:07.012 -08 000000084 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:07.012 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:07.012 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:07.013 -08 000000023 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:07.015 -08 000000098 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:07.041 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:07.042 -08 000000098 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:07.043 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.043 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.043 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.044 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.044 -08 000000074 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:07.072 -08 000000106 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:07.072 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:16:07.072 -08 000000023 INF: FPGA: Xmit ZDACW 34077\n
17-02-28 20:16:07.072 -08 000000025 INF: ======================================
17-02-28 20:16:07.074 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.074 -08 000000084 INF: ======================================
17-02-28 20:16:07.118 -08 000000075 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.118 -08 000000032 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.118 -08 000000060 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.118 -08 000000074 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:07.135 -08 000000044 INF: FPGA: Recv ZDACW 
17-02-28 20:16:07.135 -08 000000023 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:07.136 -08 000000023 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:07.196 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:16:07.196 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:07.197 -08 000000023 INF: ======================================
17-02-28 20:16:07.269 -08 000000075 INF: LFT found best fwhm score 2.000212 in 151 ms
17-02-28 20:16:07.269 -08 000000075 INF: LFT found good score at index 5397 with fwhm value 2.000212. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000032 INF: LFT found best fwhm score 2.14221 in 151 ms
17-02-28 20:16:07.269 -08 000000032 INF: LFT found good score at index 2917 with fwhm value 2.14221. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000060 INF: LFT found best fwhm score 2.000108 in 151 ms
17-02-28 20:16:07.269 -08 000000060 INF: LFT found good score at index 5357 with fwhm value 2.000108. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000074 INF: LFT found best fwhm score 2.000209 in 151 ms
17-02-28 20:16:07.269 -08 000000074 INF: LFT found good score at index 6997 with fwhm value 2.000209. Next cycle, cycle 4 starting Z position for top surface is at -0.133 mm FC:A, C:3,L:7,T
17-02-28 20:16:07.269 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000032 INF: ======================================
17-02-28 20:16:07.270 -08 000000060 INF: ======================================
17-02-28 20:16:07.270 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:16:07.270 -08 000000074 INF: ======================================
17-02-28 20:16:07.270 -08 000000075 INF: ======================================
17-02-28 20:16:07.272 -08 000000098 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:07.272 -08 000000098 INF: LFT weighted average best Z for top surface is at -0.133mm FC:A, C:3,L:7,T
17-02-28 20:16:07.273 -08 000000098 INF: ======================================
17-02-28 20:16:07.274 -08 000000058 INF: ======================================
17-02-28 20:16:07.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:07.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:16:07.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 22.17493 Y = 39.70011===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:16:07.278 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left===================
17-02-28 20:16:07.301 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:16:07.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:07.302 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:07.302 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.302 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:07.302 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:07.302 -08 000000018 INF: Transformed XStagePosition from 23.28293 mm to 23.2991453744471 mm.
17-02-28 20:16:07.354 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4866663330477 mm.
17-02-28 20:16:07.354 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2866663330477 mm.
17-02-28 20:16:07.354 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3774163330477 mm.
17-02-28 20:16:07.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:07.357 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:07.357 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -130.0 um, section = G_1
17-02-28 20:16:07.359 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:07.359 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:07.363 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":7,"Tile":1101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF254","HCSMMF230","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.372 -08 000000032 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:07.375 -08 000000079 INF: ===================Move X,Y===================
17-02-28 20:16:07.376 -08 000000079 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:07.379 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:07.379 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:07.380 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:16:07.380 -08 000000030 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:07.380 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:07.380 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:07.380 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:07.381 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:07.382 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:16:07.382 -08 000000037 INF: ===================Move X Motor without settling===================
17-02-28 20:16:07.382 -08 000000037 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:07.383 -08 000000106 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:07.383 -08 000000106 INF: Y Motor: Moving to 64.4867 mm @25.000 mm/sec, started at 14.8369 mm
17-02-28 20:16:07.383 -08 000000106 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:07.383 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:07.387 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:07.387 -08 000000045 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:07.388 -08 000000045 INF: ======================================
17-02-28 20:16:07.388 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:07.388 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.388 -08 000000066 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:07.389 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:07.389 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:07.389 -08 000000066 INF: ======================================
17-02-28 20:16:07.389 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.389 -08 000000044 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:07.390 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:16:07.390 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:07.390 -08 000000044 INF: ======================================
17-02-28 20:16:07.390 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:07.390 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:07.391 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:07.391 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:07.391 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:07.391 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:16:07.391 -08 000000047 INF: ======================================
17-02-28 20:16:07.391 -08 000000052 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:07.391 -08 000000066 INF: ======================================
17-02-28 20:16:07.392 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:07.392 -08 000000064 INF: ======================================
17-02-28 20:16:07.392 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:07.392 -08 000000052 INF: ======================================
17-02-28 20:16:07.392 -08 000000101 INF: ======================================
17-02-28 20:16:07.393 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:07.393 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:07.393 -08 000000066 INF: ======================================
17-02-28 20:16:07.394 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:07.395 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:07.395 -08 000000060 INF: ======================================
17-02-28 20:16:07.395 -08 000000053 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:07.396 -08 000000059 INF: ======================================
17-02-28 20:16:07.396 -08 000000053 INF: ======================================
17-02-28 20:16:07.397 -08 000000032 INF: ======================================
17-02-28 20:16:07.415 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":7,"Tile":1106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF209","HCSMMF275","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.438 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":7,"Tile":1102,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF185","HCSMMF226","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.460 -08 000000060 INF: FPGA: Recv ZSEL 
17-02-28 20:16:07.462 -08 000000037 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:07.462 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.462 -08 000000106 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:07.462 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:07.462 -08 000000037 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:07.463 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:07.463 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:16:07.493 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":7,"Tile":1104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF200","HCSMMF188","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.494 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":7,"Tile":1105,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF183","HCSMMF257","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.495 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":7,"Tile":1103,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF266","HCSMMF214","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.496 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":7,"Tile":1109,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF282","HCSMMF215","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.497 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":7,"Tile":1113,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF184","HCSMMF197","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.498 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":7,"Tile":1111,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF191","HCSMMF283","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.499 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":7,"Tile":1112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF211","HCSMMF276","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.500 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":7,"Tile":1110,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF252","HCSMMF251","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.500 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":7,"Tile":1107,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF264","HCSMMF227","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.501 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":7,"Tile":1108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF241","HCSMMF281","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.502 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":7,"Tile":1115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF232","HCSMMF239","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.503 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":7,"Tile":1114,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF206","HCSMMF255","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.504 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":7,"Tile":1119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF286","HCSMMF192","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.505 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":7,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF237","HCSMMF284","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.506 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":7,"Tile":1120,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF253","HCSMMF216","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.507 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":7,"Tile":1116,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF271","HCSMMF278","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.508 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":7,"Tile":1123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF268","HCSMMF250","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.509 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":7,"Tile":1125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF235","HCSMMF220","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.510 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":7,"Tile":1118,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF194","HCSMMF236","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.511 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":7,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF279","HCSMMF180","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.512 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.512 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Moving to 23.2991 mm @15.000 mm/sec, started at 22.1958 mm
17-02-28 20:16:07.512 -08 000000037 INF: X Motor: Xmit MA -14623\n
17-02-28 20:16:07.512 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":7,"Tile":1121,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF228","HCSMMF256","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.513 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":7,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF176","HCSMMF269","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.514 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":7,"Tile":1122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF233","HCSMMF238","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.516 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":7,"Tile":1126,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF273","HCSMMF186","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.517 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":7,"Tile":1127,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF249","HCSMMF222","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:07.520 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.525 -08 000000098 INF: FPGA: Recv TDIBB
17-02-28 20:16:07.525 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:07.526 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:07.526 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:07.527 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.528 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:16:07.529 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:16:07.529 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:07.573 -08 000000037 INF: X Motor: Recv MA -14623\r\n>
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Set target position to 5948667 encoder counts
17-02-28 20:16:07.573 -08 000000106 INF: Y Motor: Xmit s r0xca 5948667\r
17-02-28 20:16:07.573 -08 000000037 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:16:07.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:07.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 22 of 30 seconds left===================
17-02-28 20:16:07.586 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:07.586 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.588 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:07.588 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.590 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:07.590 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:07.590 -08 000000089 INF: Z Motor: Arming to move to -0.0900 mm
17-02-28 20:16:07.590 -08 000000089 INF: FPGA: Xmit ZYT 6428667 4\n
17-02-28 20:16:07.614 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.615 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:07.637 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.637 -08 000000106 INF: Y Motor: Start the move command
17-02-28 20:16:07.637 -08 000000106 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:07.648 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:16:07.648 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483693 enc / 14.837 mm / ) = 6428667 enc / 64.287 mm
17-02-28 20:16:07.648 -08 000000089 INF: FPGA: Xmit ZARM 23591\n
17-02-28 20:16:07.650 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.656 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:07.700 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:07.700 -08 000000106 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:16:07.700 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:07.713 -08 000000028 INF: FPGA: Recv ZARM
17-02-28 20:16:07.713 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.913 ms
17-02-28 20:16:07.713 -08 000000089 INF: Z Motor: ArmAbsStepped took 122.8659 ms
17-02-28 20:16:07.713 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:07.714 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.716 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:07.716 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.718 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:07.718 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:16:07.719 -08 000000089 INF: ======================================
17-02-28 20:16:07.745 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.751 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:07.823 -08 000000106 INF: Y Motor: Unshifted Position: 1067679
17-02-28 20:16:07.867 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.873 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:07.873 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:07.976 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:07.984 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:07.985 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:07.985 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:07.999 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.000 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:08.002 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:08.134 -08 000000106 INF: Y Motor: Unshifted Position: 1767855
17-02-28 20:16:08.184 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.198 -08 000000037 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:08.259 -08 000000037 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:08.259 -08 000000037 INF: X Motor: Moved to 23.2993 after 686 ms
17-02-28 20:16:08.259 -08 000000037 INF: ======================================
17-02-28 20:16:08.273 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:08.309 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.446 -08 000000106 INF: Y Motor: Unshifted Position: 2556222
17-02-28 20:16:08.496 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:08.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 21 of 30 seconds left===================
17-02-28 20:16:08.603 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:08.603 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:08.603 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:08.618 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:08.620 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:16:08.621 -08 000000045 INF: ======================================
17-02-28 20:16:08.622 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:08.623 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.624 -08 000000030 INF: ======================================
17-02-28 20:16:08.760 -08 000000106 INF: Y Motor: Unshifted Position: 3328667
17-02-28 20:16:08.810 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:08.935 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.071 -08 000000106 INF: Y Motor: Unshifted Position: 4114563
17-02-28 20:16:09.121 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.245 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.383 -08 000000106 INF: Y Motor: Unshifted Position: 4894497
17-02-28 20:16:09.433 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.557 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:09.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 20 of 30 seconds left===================
17-02-28 20:16:09.694 -08 000000106 INF: Y Motor: Unshifted Position: 5671583
17-02-28 20:16:09.744 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:09.871 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:10.009 -08 000000106 INF: Y Motor: Unshifted Position: 5948669
17-02-28 20:16:10.009 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:10.009 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:10.070 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:10.070 -08 000000106 INF: Y Motor: Moved to 64.4867 after 2370 ms
17-02-28 20:16:10.070 -08 000000106 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:10.132 -08 000000106 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:10.132 -08 000000106 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:10.132 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:10.193 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:10.193 -08 000000106 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:10.193 -08 000000106 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:10.256 -08 000000106 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:10.320 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:10.382 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:10.382 -08 000000106 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:10.382 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:10.444 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:10.444 -08 000000106 INF: ======================================
17-02-28 20:16:10.445 -08 000000079 INF: ===================Move X,Y===================
17-02-28 20:16:10.446 -08 000000079 INF: ======================================
17-02-28 20:16:10.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:10.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:10.448 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:16:10.448 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:16:10.505 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:10.505 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:16:10.521 -08 000000038 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:10.521 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:10.521 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:10.522 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:10.583 -08 000000010 INF: FPGA: Recv TDIYERD 6448669
17-02-28 20:16:10.583 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448669 counts (64.487 mm)
17-02-28 20:16:10.583 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:10.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:10.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 19 of 30 seconds left===================
17-02-28 20:16:10.584 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:10.585 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:10.585 -08 000000068 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:10.585 -08 000000068 INF: ======================================
17-02-28 20:16:10.585 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:10.586 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:10.586 -08 000000052 INF: FPGA: Xmit TDIYPOS 6337742\n
17-02-28 20:16:10.645 -08 000000023 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:10.645 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:10.647 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:10.647 -08 000000052 INF: FPGA: Xmit TDIYARM3 139264 6428667 1 1\n
17-02-28 20:16:10.706 -08 000000079 INF: FPGA: Recv TDIYARM3
17-02-28 20:16:10.706 -08 000000052 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:10.707 -08 000000052 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:10.708 -08 000000052 INF: ======================================
17-02-28 20:16:10.710 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:10.710 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:10.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:10.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:10.712 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:10.712 -08 000000089 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:10.712 -08 000000039 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:10.712 -08 000000089 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:10.713 -08 000000089 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:10.713 -08 000000089 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:10.713 -08 000000039 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:10.713 -08 000000089 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:10.713 -08 000000039 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:10.713 -08 000000039 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:10.714 -08 000000039 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:11.082 -08 000000060 INF: FPGA: Recv EX2MV
17-02-28 20:16:11.082 -08 000000060 INF: FPGA: Recv EX1MV
17-02-28 20:16:11.082 -08 000000089 INF: Excitation Filter 2: Moved -107 steps in 369.3318 ms
17-02-28 20:16:11.082 -08 000000039 INF: Excitation Filter 1: Moved -107 steps in 369.2208 ms
17-02-28 20:16:11.082 -08 000000089 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.5367 ms
17-02-28 20:16:11.082 -08 000000039 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.4796 ms
17-02-28 20:16:11.082 -08 000000039 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.5995 ms
17-02-28 20:16:11.082 -08 000000089 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.6499 ms
17-02-28 20:16:11.083 -08 000000039 INF: ======================================
17-02-28 20:16:11.083 -08 000000089 INF: ======================================
17-02-28 20:16:11.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:11.086 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:11.087 -08 000000028 INF: ===================Camera TDI===================
17-02-28 20:16:11.087 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:11.087 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:11.087 -08 000000085 INF: ===================FPGA Z Wait===================
17-02-28 20:16:11.088 -08 000000052 INF: Y Motor: Moving to 14.8383 mm @6.500 mm/sec, started at 64.4867 mm
17-02-28 20:16:11.088 -08 000000085 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:11.088 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:11.088 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:11.088 -08 000000028 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:11.088 -08 000000106 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:11.089 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:11.089 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:16:11.089 -08 000000106 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:11.091 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.091 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.091 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.091 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.130 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.130 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:11.130 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:11.193 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.193 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:11.241 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.241 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.241 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.241 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Set target position to 983833 encoder counts
17-02-28 20:16:11.254 -08 000000052 INF: Y Motor: Xmit s r0xca 983833\r
17-02-28 20:16:11.316 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.316 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:16:11.316 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:11.381 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:11.381 -08 000000052 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:16:11.381 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.391 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.391 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.391 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:11.391 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:11.455 -08 000000050 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:11.455 -08 000000085 INF: ======================================
17-02-28 20:16:11.504 -08 000000052 INF: Y Motor: Unshifted Position: 5885510
17-02-28 20:16:11.541 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:11.541 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:11.541 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:11.541 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:11.541 -08 000000082 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:11.541 -08 000000068 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:11.554 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:11.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 18 of 30 seconds left===================
17-02-28 20:16:11.680 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.714 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:16:11.714 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:16:11.714 -08 000000082 INF: ===================Camera #0 Frame #12===================
17-02-28 20:16:11.715 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:16:11.715 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:16:11.715 -08 000000068 INF: ===================Camera #2 Frame #12===================
17-02-28 20:16:11.815 -08 000000052 INF: Y Motor: Unshifted Position: 5683147
17-02-28 20:16:11.865 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:11.889 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:16:11.889 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:16:11.889 -08 000000082 INF: ===================Camera #0 Frame #18===================
17-02-28 20:16:11.897 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:16:11.897 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:16:11.897 -08 000000068 INF: ===================Camera #2 Frame #18===================
17-02-28 20:16:11.991 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.065 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:16:12.065 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:16:12.065 -08 000000082 INF: ===================Camera #0 Frame #25===================
17-02-28 20:16:12.075 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:16:12.075 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:16:12.075 -08 000000068 INF: ===================Camera #2 Frame #25===================
17-02-28 20:16:12.129 -08 000000052 INF: Y Motor: Unshifted Position: 5479054
17-02-28 20:16:12.179 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.236 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:16:12.236 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:16:12.236 -08 000000082 INF: ===================Camera #0 Frame #31===================
17-02-28 20:16:12.255 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 31, frameCount = 32.
17-02-28 20:16:12.255 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 32
17-02-28 20:16:12.255 -08 000000068 INF: ===================Camera #2 Frame #32===================
17-02-28 20:16:12.302 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.412 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:16:12.412 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:16:12.412 -08 000000082 INF: ===================Camera #0 Frame #37===================
17-02-28 20:16:12.431 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38.
17-02-28 20:16:12.431 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:16:12.431 -08 000000068 INF: ===================Camera #2 Frame #38===================
17-02-28 20:16:12.441 -08 000000052 INF: Y Motor: Unshifted Position: 5276251
17-02-28 20:16:12.491 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:12.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 17 of 30 seconds left===================
17-02-28 20:16:12.586 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:16:12.586 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:16:12.586 -08 000000082 INF: ===================Camera #0 Frame #44===================
17-02-28 20:16:12.601 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:16:12.601 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:16:12.601 -08 000000068 INF: ===================Camera #2 Frame #44===================
17-02-28 20:16:12.614 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.752 -08 000000052 INF: Y Motor: Unshifted Position: 5073880
17-02-28 20:16:12.760 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:16:12.760 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:16:12.760 -08 000000082 INF: ===================Camera #0 Frame #50===================
17-02-28 20:16:12.773 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:16:12.773 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:16:12.773 -08 000000068 INF: ===================Camera #2 Frame #51===================
17-02-28 20:16:12.802 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.929 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:12.929 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:16:12.929 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:16:12.929 -08 000000082 INF: ===================Camera #0 Frame #56===================
17-02-28 20:16:12.952 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:16:12.952 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:16:12.952 -08 000000068 INF: ===================Camera #2 Frame #57===================
17-02-28 20:16:13.063 -08 000000052 INF: Y Motor: Unshifted Position: 4871516
17-02-28 20:16:13.107 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:16:13.107 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:16:13.107 -08 000000082 INF: ===================Camera #0 Frame #63===================
17-02-28 20:16:13.113 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.130 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:16:13.130 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:16:13.130 -08 000000068 INF: ===================Camera #2 Frame #64===================
17-02-28 20:16:13.239 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.288 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:16:13.288 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:16:13.288 -08 000000082 INF: ===================Camera #0 Frame #70===================
17-02-28 20:16:13.313 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:16:13.313 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71
17-02-28 20:16:13.313 -08 000000068 INF: ===================Camera #2 Frame #71===================
17-02-28 20:16:13.375 -08 000000052 INF: Y Motor: Unshifted Position: 4668500
17-02-28 20:16:13.425 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.469 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:16:13.469 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:16:13.469 -08 000000082 INF: ===================Camera #0 Frame #76===================
17-02-28 20:16:13.485 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:16:13.485 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:16:13.485 -08 000000068 INF: ===================Camera #2 Frame #77===================
17-02-28 20:16:13.554 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:13.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 16 of 30 seconds left===================
17-02-28 20:16:13.638 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:16:13.638 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:16:13.638 -08 000000082 INF: ===================Camera #0 Frame #82===================
17-02-28 20:16:13.663 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:16:13.663 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:16:13.663 -08 000000068 INF: ===================Camera #2 Frame #83===================
17-02-28 20:16:13.689 -08 000000052 INF: Y Motor: Unshifted Position: 4464388
17-02-28 20:16:13.739 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.807 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:16:13.807 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:16:13.807 -08 000000082 INF: ===================Camera #0 Frame #89===================
17-02-28 20:16:13.832 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:16:13.832 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:16:13.832 -08 000000068 INF: ===================Camera #2 Frame #90===================
17-02-28 20:16:13.862 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:13.979 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:16:13.979 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:16:13.979 -08 000000082 INF: ===================Camera #0 Frame #95===================
17-02-28 20:16:14.000 -08 000000052 INF: Y Motor: Unshifted Position: 4262245
17-02-28 20:16:14.005 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:16:14.005 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:16:14.005 -08 000000068 INF: ===================Camera #2 Frame #96===================
17-02-28 20:16:14.050 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.147 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:16:14.147 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:16:14.147 -08 000000082 INF: ===================Camera #0 Frame #101===================
17-02-28 20:16:14.175 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:16:14.175 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:16:14.175 -08 000000068 INF: ===================Camera #2 Frame #102===================
17-02-28 20:16:14.176 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.312 -08 000000052 INF: Y Motor: Unshifted Position: 4059865
17-02-28 20:16:14.316 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:16:14.316 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:16:14.316 -08 000000082 INF: ===================Camera #0 Frame #107===================
17-02-28 20:16:14.346 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:16:14.346 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:16:14.346 -08 000000068 INF: ===================Camera #2 Frame #109===================
17-02-28 20:16:14.362 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.484 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:16:14.484 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:16:14.484 -08 000000082 INF: ===================Camera #0 Frame #114===================
17-02-28 20:16:14.488 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.519 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:16:14.519 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:16:14.519 -08 000000068 INF: ===================Camera #2 Frame #115===================
17-02-28 20:16:14.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:14.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 15 of 30 seconds left===================
17-02-28 20:16:14.623 -08 000000052 INF: Y Motor: Unshifted Position: 3857069
17-02-28 20:16:14.656 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:16:14.656 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:16:14.656 -08 000000082 INF: ===================Camera #0 Frame #120===================
17-02-28 20:16:14.673 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.688 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:16:14.688 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:16:14.688 -08 000000068 INF: ===================Camera #2 Frame #121===================
17-02-28 20:16:14.799 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.825 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:16:14.825 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:16:14.825 -08 000000082 INF: ===================Camera #0 Frame #126===================
17-02-28 20:16:14.857 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:16:14.857 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:16:14.857 -08 000000068 INF: ===================Camera #2 Frame #127===================
17-02-28 20:16:14.937 -08 000000052 INF: Y Motor: Unshifted Position: 3652965
17-02-28 20:16:14.987 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:14.994 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:16:14.994 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:16:14.994 -08 000000082 INF: ===================Camera #0 Frame #132===================
17-02-28 20:16:15.026 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:16:15.026 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:16:15.026 -08 000000068 INF: ===================Camera #2 Frame #134===================
17-02-28 20:16:15.110 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.162 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:16:15.162 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:16:15.162 -08 000000082 INF: ===================Camera #0 Frame #139===================
17-02-28 20:16:15.198 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:16:15.198 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:16:15.198 -08 000000068 INF: ===================Camera #2 Frame #140===================
17-02-28 20:16:15.248 -08 000000052 INF: Y Motor: Unshifted Position: 3450595
17-02-28 20:16:15.298 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.333 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:16:15.333 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:16:15.333 -08 000000082 INF: ===================Camera #0 Frame #145===================
17-02-28 20:16:15.367 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:16:15.367 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:16:15.367 -08 000000068 INF: ===================Camera #2 Frame #146===================
17-02-28 20:16:15.422 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.501 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:16:15.501 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:16:15.501 -08 000000082 INF: ===================Camera #0 Frame #151===================
17-02-28 20:16:15.536 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:16:15.536 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:16:15.536 -08 000000068 INF: ===================Camera #2 Frame #152===================
17-02-28 20:16:15.560 -08 000000052 INF: Y Motor: Unshifted Position: 3247799
17-02-28 20:16:15.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:15.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 14 of 30 seconds left===================
17-02-28 20:16:15.610 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.669 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:16:15.669 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:16:15.669 -08 000000082 INF: ===================Camera #0 Frame #157===================
17-02-28 20:16:15.705 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:16:15.705 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:16:15.705 -08 000000068 INF: ===================Camera #2 Frame #159===================
17-02-28 20:16:15.736 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:15.837 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:16:15.837 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:16:15.837 -08 000000082 INF: ===================Camera #0 Frame #163===================
17-02-28 20:16:15.871 -08 000000052 INF: Y Motor: Unshifted Position: 3045441
17-02-28 20:16:15.877 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:16:15.877 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:16:15.877 -08 000000068 INF: ===================Camera #2 Frame #165===================
17-02-28 20:16:15.921 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.005 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:16:16.005 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:16:16.005 -08 000000082 INF: ===================Camera #0 Frame #170===================
17-02-28 20:16:16.046 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:16:16.046 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:16:16.046 -08 000000068 INF: ===================Camera #2 Frame #171===================
17-02-28 20:16:16.047 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.176 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:16:16.176 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:16:16.176 -08 000000082 INF: ===================Camera #0 Frame #176===================
17-02-28 20:16:16.185 -08 000000052 INF: Y Motor: Unshifted Position: 2841347
17-02-28 20:16:16.215 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:16:16.215 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:16:16.215 -08 000000068 INF: ===================Camera #2 Frame #177===================
17-02-28 20:16:16.236 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.345 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:16:16.345 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:16:16.345 -08 000000082 INF: ===================Camera #0 Frame #182===================
17-02-28 20:16:16.359 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.385 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:16:16.385 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:16:16.385 -08 000000068 INF: ===================Camera #2 Frame #184===================
17-02-28 20:16:16.497 -08 000000052 INF: Y Motor: Unshifted Position: 2638978
17-02-28 20:16:16.513 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:16:16.513 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:16:16.513 -08 000000082 INF: ===================Camera #0 Frame #188===================
17-02-28 20:16:16.547 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.558 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:16:16.558 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:16:16.558 -08 000000068 INF: ===================Camera #2 Frame #190===================
17-02-28 20:16:16.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:16.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 13 of 30 seconds left===================
17-02-28 20:16:16.673 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.681 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:16.681 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:16.681 -08 000000082 INF: ===================Camera #0 Frame #194===================
17-02-28 20:16:16.726 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:16:16.726 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:16:16.726 -08 000000068 INF: ===================Camera #2 Frame #196===================
17-02-28 20:16:16.808 -08 000000052 INF: Y Motor: Unshifted Position: 2434887
17-02-28 20:16:16.849 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:16:16.849 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:16:16.849 -08 000000082 INF: ===================Camera #0 Frame #201===================
17-02-28 20:16:16.858 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:16.895 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:16:16.895 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:16:16.895 -08 000000068 INF: ===================Camera #2 Frame #202===================
17-02-28 20:16:16.984 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.020 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:16:17.020 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:16:17.020 -08 000000082 INF: ===================Camera #0 Frame #207===================
17-02-28 20:16:17.064 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:16:17.064 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:16:17.064 -08 000000068 INF: ===================Camera #2 Frame #209===================
17-02-28 20:16:17.122 -08 000000052 INF: Y Motor: Unshifted Position: 2232517
17-02-28 20:16:17.172 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.188 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:16:17.188 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:16:17.188 -08 000000082 INF: ===================Camera #0 Frame #213===================
17-02-28 20:16:17.236 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:16:17.236 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:16:17.236 -08 000000068 INF: ===================Camera #2 Frame #215===================
17-02-28 20:16:17.296 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.356 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:16:17.356 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:16:17.356 -08 000000082 INF: ===================Camera #0 Frame #219===================
17-02-28 20:16:17.405 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:16:17.405 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:16:17.405 -08 000000068 INF: ===================Camera #2 Frame #221===================
17-02-28 20:16:17.434 -08 000000052 INF: Y Motor: Unshifted Position: 2029711
17-02-28 20:16:17.484 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.524 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:17.524 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:16:17.524 -08 000000082 INF: ===================Camera #0 Frame #226===================
17-02-28 20:16:17.574 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:16:17.574 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:16:17.574 -08 000000068 INF: ===================Camera #2 Frame #227===================
17-02-28 20:16:17.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:17.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 12 of 30 seconds left===================
17-02-28 20:16:17.607 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.695 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:16:17.695 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:16:17.695 -08 000000082 INF: ===================Camera #0 Frame #232===================
17-02-28 20:16:17.743 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:16:17.743 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:16:17.743 -08 000000068 INF: ===================Camera #2 Frame #234===================
17-02-28 20:16:17.746 -08 000000052 INF: Y Motor: Unshifted Position: 1827344
17-02-28 20:16:17.796 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:17.863 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:16:17.863 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:16:17.863 -08 000000082 INF: ===================Camera #0 Frame #238===================
17-02-28 20:16:17.915 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:16:17.915 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:16:17.915 -08 000000068 INF: ===================Camera #2 Frame #240===================
17-02-28 20:16:17.921 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.031 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:16:18.031 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:16:18.031 -08 000000082 INF: ===================Camera #0 Frame #244===================
17-02-28 20:16:18.056 -08 000000052 INF: Y Motor: Unshifted Position: 1624980
17-02-28 20:16:18.084 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:16:18.084 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:16:18.084 -08 000000068 INF: ===================Camera #2 Frame #246===================
17-02-28 20:16:18.106 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.199 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:16:18.199 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:16:18.199 -08 000000082 INF: ===================Camera #0 Frame #250===================
17-02-28 20:16:18.232 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.253 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:16:18.253 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:16:18.253 -08 000000068 INF: ===================Camera #2 Frame #252===================
17-02-28 20:16:18.367 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:16:18.367 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:16:18.367 -08 000000082 INF: ===================Camera #0 Frame #257===================
17-02-28 20:16:18.370 -08 000000052 INF: Y Motor: Unshifted Position: 1420874
17-02-28 20:16:18.420 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.422 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:16:18.422 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:16:18.422 -08 000000068 INF: ===================Camera #2 Frame #259===================
17-02-28 20:16:18.538 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:16:18.538 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:16:18.538 -08 000000082 INF: ===================Camera #0 Frame #263===================
17-02-28 20:16:18.544 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:18.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 11 of 30 seconds left===================
17-02-28 20:16:18.594 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:16:18.594 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:16:18.594 -08 000000068 INF: ===================Camera #2 Frame #265===================
17-02-28 20:16:18.683 -08 000000052 INF: Y Motor: Unshifted Position: 1217857
17-02-28 20:16:18.706 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:16:18.706 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:16:18.706 -08 000000082 INF: ===================Camera #0 Frame #269===================
17-02-28 20:16:18.733 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.763 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:16:18.763 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:16:18.763 -08 000000068 INF: ===================Camera #2 Frame #271===================
17-02-28 20:16:18.818 -08 000000010 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:18.818 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:18.820 -08 000000106 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:18.821 -08 000000101 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:18.821 -08 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:18.821 -08 000000101 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:18.821 -08 000000101 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:18.821 -08 000000101 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:18.821 -08 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:18.821 -08 000000101 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:18.821 -08 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:18.821 -08 000000058 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:18.822 -08 000000058 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:18.855 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:18.874 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:18.874 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:18.874 -08 000000082 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:18.884 -08 000000082 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:18.885 -08 000000082 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:19.012 -08 000000052 INF: Y Motor: Unshifted Position: 1015704
17-02-28 20:16:19.034 -08 000000082 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:19.034 -08 000000068 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:19.034 -08 000000068 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:19.034 -08 000000068 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:19.034 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:16:19.038 -08 000000068 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:19.039 -08 000000068 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:19.062 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:19.064 -08 000000082 INF: ======================================
17-02-28 20:16:19.193 -08 000000010 INF: FPGA: Recv EX2MV
17-02-28 20:16:19.193 -08 000000010 INF: FPGA: Recv EX1MV
17-02-28 20:16:19.193 -08 000000101 INF: Excitation Filter 2: Moved 107 steps in 371.9956 ms
17-02-28 20:16:19.193 -08 000000058 INF: Excitation Filter 1: Moved 107 steps in 371.8553 ms
17-02-28 20:16:19.193 -08 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0461 ms
17-02-28 20:16:19.193 -08 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1233 ms
17-02-28 20:16:19.193 -08 000000101 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1081 ms
17-02-28 20:16:19.193 -08 000000101 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2823 ms
17-02-28 20:16:19.194 -08 000000058 INF: ======================================
17-02-28 20:16:19.194 -08 000000101 INF: ======================================
17-02-28 20:16:19.195 -08 000000052 INF: Y Motor: Unshifted Position: 983832
17-02-28 20:16:19.195 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:19.195 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:19.195 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:19.196 -08 000000106 INF: ======================================
17-02-28 20:16:19.207 -08 000000068 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:19.207 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:19.242 -08 000000068 INF: ======================================
17-02-28 20:16:19.243 -08 000000028 INF: ===================Camera TDI===================
17-02-28 20:16:19.244 -08 000000028 INF: ======================================
17-02-28 20:16:19.257 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:19.257 -08 000000052 INF: Y Motor: Moved to 14.8383 after 7875 ms
17-02-28 20:16:19.257 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:19.322 -08 000000052 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:19.322 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:19.322 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:19.383 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:19.383 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:19.383 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:19.444 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:19.509 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:19.571 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:19.571 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:19.571 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:19.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:19.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left===================
17-02-28 20:16:19.633 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:16:19.633 -08 000000052 INF: ======================================
17-02-28 20:16:19.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:19.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:19.636 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.636 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:19.693 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:19.693 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:19.755 -08 000000030 INF: FPGA: Recv TDIYERD 1483834
17-02-28 20:16:19.755 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:19.817 -08 000000084 INF: FPGA: Recv ZADCR 34399
17-02-28 20:16:19.817 -08 000000018 INF: At scan end Y pos = 14.838 and Z pos = -0.132. Y moved -48.539 mm
17-02-28 20:16:19.817 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:19.879 -08 000000032 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:19.879 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:19.879 -08 000000018 INF: TDIScan finished after 12576.003 ms
17-02-28 20:16:19.879 -08 000000018 INF: Image[0]: Y should trigger at 63.377 mm, 2nd row was at 64.286 mm (error = 0.909 mm)
17-02-28 20:16:19.879 -08 000000018 INF: Image[2]: Y should trigger at 63.377 mm, 2nd row was at 64.286 mm (error = 0.909 mm)
17-02-28 20:16:19.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.916 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.764 um
17-02-28 20:16:19.916 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.917 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:19.941 -08 000000038 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:19.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:19.942 -08 000000089 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:19.942 -08 000000082 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:19.942 -08 000000037 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:19.942 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:19.943 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:19.943 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:19.943 -08 000000082 INF: ======================================
17-02-28 20:16:19.943 -08 000000037 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:19.943 -08 000000037 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:19.943 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:19.943 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:19.944 -08 000000095 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:19.946 -08 000000079 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:19.972 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:19.972 -08 000000079 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:19.973 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000068 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:19.973 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:19.974 -08 000000068 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:19.974 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:19.974 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:20.007 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:20.007 -08 000000098 INF: FPGA: Recv ZSEL 
17-02-28 20:16:20.007 -08 000000095 INF: FPGA: Xmit ZDACW 34077\n
17-02-28 20:16:20.008 -08 000000051 INF: ======================================
17-02-28 20:16:20.011 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:16:20.011 -08 000000037 INF: ======================================
17-02-28 20:16:20.050 -08 000000068 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.050 -08 000000064 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.050 -08 000000032 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.050 -08 000000044 INF: FC:A, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:20.066 -08 000000050 INF: FPGA: Recv ZDACW 
17-02-28 20:16:20.067 -08 000000095 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:20.067 -08 000000095 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:20.131 -08 000000085 INF: FPGA: Recv TDIBB
17-02-28 20:16:20.131 -08 000000095 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:20.132 -08 000000095 INF: ======================================
17-02-28 20:16:20.202 -08 000000068 INF: LFT found best fwhm score 2.000106 in 152 ms
17-02-28 20:16:20.202 -08 000000068 INF: LFT found good score at index 3401 with fwhm value 2.000106. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.202 -08 000000064 INF: LFT found best fwhm score 2.000044 in 152 ms
17-02-28 20:16:20.202 -08 000000064 INF: LFT found good score at index 8285 with fwhm value 2.000044. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.202 -08 000000068 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.202 -08 000000032 INF: LFT found best fwhm score 2.000053 in 152 ms
17-02-28 20:16:20.202 -08 000000032 INF: LFT found good score at index 6709 with fwhm value 2.000053. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.203 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.203 -08 000000068 INF: ======================================
17-02-28 20:16:20.203 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.203 -08 000000044 INF: LFT found best fwhm score 2.12612 in 152 ms
17-02-28 20:16:20.203 -08 000000044 INF: LFT found good score at index 6785 with fwhm value 2.12612. Next cycle, cycle 4 starting Z position for top surface is at -0.134 mm FC:A, C:3,L:7,T
17-02-28 20:16:20.203 -08 000000064 INF: ======================================
17-02-28 20:16:20.203 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:20.203 -08 000000032 INF: ======================================
17-02-28 20:16:20.203 -08 000000044 INF: ======================================
17-02-28 20:16:20.204 -08 000000079 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:20.205 -08 000000079 INF: LFT weighted average best Z for top surface is at -0.134mm FC:A, C:3,L:7,T
17-02-28 20:16:20.205 -08 000000079 INF: ======================================
17-02-28 20:16:20.206 -08 000000089 INF: ======================================
17-02-28 20:16:20.207 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.208 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:20.208 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.208 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:20.209 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:20.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:20.210 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 23.28293 Y = 39.70011===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:16:20.211 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left===================
17-02-28 20:16:20.234 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:16:20.234 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:20.234 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:20.234 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.235 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:20.235 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:16:20.235 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:16:20.278 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":7,"Tile":1203,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF261","HCSMMF238","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.285 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:20.285 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:20.381 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:20.382 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.383 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:16:20.383 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:16:20.465 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":7,"Tile":1201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF247","HCSMMF285","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.469 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":7,"Tile":1204,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF273","HCSMMF274","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.471 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":7,"Tile":1202,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF186","HCSMMF240","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.473 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":7,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF269","HCSMMF190","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.475 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":7,"Tile":1211,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF283","HCSMMF195","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.476 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":7,"Tile":1209,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF276","HCSMMF271","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.478 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":7,"Tile":1208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF217","HCSMMF224","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.479 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":7,"Tile":1206,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF239","HCSMMF179","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.480 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":7,"Tile":1213,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF286","HCSMMF221","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.482 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":7,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF191","HCSMMF236","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.492 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":7,"Tile":1215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF182","HCSMMF218","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.493 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":7,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF266","HCSMMF199","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.495 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":7,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF278","HCSMMF241","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.496 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":7,"Tile":1207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF242","HCSMMF263","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.498 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":7,"Tile":1217,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF246","HCSMMF253","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.500 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":7,"Tile":1221,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF204","HCSMMF260","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.502 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":7,"Tile":1220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF203","HCSMMF183","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.504 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":7,"Tile":1218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF235","HCSMMF187","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.505 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":7,"Tile":1216,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF270","HCSMMF255","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.507 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":7,"Tile":1219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF267","HCSMMF215","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.508 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":7,"Tile":1225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF209","HCSMMF244","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.509 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":7,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF177","HCSMMF229","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.510 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":7,"Tile":1222,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF248","HCSMMF231","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.512 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":7,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF180","HCSMMF264","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.513 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":7,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF268","HCSMMF259","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.514 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":7,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF275","HCSMMF185","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.515 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":7,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF230","HCSMMF181","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:20.517 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.523 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:20.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:20.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 9 of 30 seconds left===================
17-02-28 20:16:20.623 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.623 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:20.661 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.667 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:20.764 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.769 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:16:20.769 -08 000000018 INF: Compensator: Moved OutOfPath in 386 ms
17-02-28 20:16:20.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.770 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:20.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:20.771 -08 000000084 INF: ===================Move Tilt Motor 1===================
17-02-28 20:16:20.771 -08 000000025 INF: ===================Move Tilt Motor 2===================
17-02-28 20:16:20.771 -08 000000084 INF: Tilt Motor 1: Moving to 4.9747 mm, started at 5.1788 mm, delta = -0.2041 mm
17-02-28 20:16:20.771 -08 000000030 INF: ===================Move Tilt Motor 3===================
17-02-28 20:16:20.771 -08 000000025 INF: Tilt Motor 2: Moving to 5.3640 mm, started at 5.2428 mm, delta = 0.1212 mm
17-02-28 20:16:20.771 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:20.771 -08 000000030 INF: Tilt Motor 3: Moving to 5.3906 mm, started at 5.2710 mm, delta = 0.1196 mm
17-02-28 20:16:20.774 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:20.775 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:20.831 -08 000000010 INF: FPGA: Recv T1RD 20388
17-02-28 20:16:20.831 -08 000000010 INF: FPGA: Recv T2RD 20641
17-02-28 20:16:20.831 -08 000000010 INF: FPGA: Recv T3RD 20750
17-02-28 20:16:20.831 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3458 + 2/6
17-02-28 20:16:20.831 -08 000000030 INF: Tilt Motor 3: Moving to 21223 encoder counts
17-02-28 20:16:20.831 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3440 + 1/6
17-02-28 20:16:20.831 -08 000000025 INF: Tilt Motor 2: Moving to 21118 encoder counts
17-02-28 20:16:20.831 -08 000000030 INF: FPGA: Xmit T3MOVETO 21223\n
17-02-28 20:16:20.831 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:16:20.831 -08 000000084 INF: Tilt Motor 1: Moving to 19585 encoder counts
17-02-28 20:16:20.832 -08 000000084 INF: FPGA: Xmit T1MOVETO 19585\n
17-02-28 20:16:20.834 -08 000000025 INF: FPGA: Xmit T2MOVETO 21118\n
17-02-28 20:16:20.856 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:20.862 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:20.944 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:21.080 -08 000000032 INF: FPGA: Recv T3MOVETO 78
17-02-28 20:16:21.080 -08 000000032 INF: FPGA: Recv T2MOVETO 79
17-02-28 20:16:21.080 -08 000000030 INF: Tilt Motor 3: To move from 5.271 to 5.391 (0.120 mm) should take 79 steps, but required 78 steps (0.119 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:16:21.080 -08 000000025 INF: Tilt Motor 2: To move from 5.243 to 5.364 (0.121 mm) should take 80 steps, but required 79 steps (0.120 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:16:21.080 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:21.083 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:21.145 -08 000000095 INF: FPGA: Recv T3RD 21219
17-02-28 20:16:21.145 -08 000000095 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:21.145 -08 000000095 INF: FPGA: Recv T1MOVETO 133
17-02-28 20:16:21.145 -08 000000084 INF: Tilt Motor 1: To move from 5.179 to 4.975 (-0.204 mm) should take 134 steps, but required 133 steps (0.203 mm). Slippage = -0.002 mm (0.01%)
17-02-28 20:16:21.145 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:21.145 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:21.145 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3536 + 3/6
17-02-28 20:16:21.148 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:21.149 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:21.207 -08 000000045 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:21.207 -08 000000045 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:21.207 -08 000000045 INF: FPGA: Recv T3RD 21217
17-02-28 20:16:21.207 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3536 + 1/6
17-02-28 20:16:21.207 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:21.207 -08 000000030 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:21.207 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:21.210 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:21.211 -08 000000025 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:21.230 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:21.269 -08 000000089 INF: FPGA: Recv T3RD 21217
17-02-28 20:16:21.269 -08 000000089 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:21.269 -08 000000089 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:21.269 -08 000000025 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:21.269 -08 000000025 INF: Tilt Motor 2: After move to 5.3640, error = -0.0005, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.269 -08 000000030 INF: Tilt Motor 3: Encoder: at motor step 3536 + 1/6
17-02-28 20:16:21.269 -08 000000030 INF: Tilt Motor 3: After move to 5.3906, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.269 -08 000000025 INF: Tilt Motor 2: Moved to 5.3635 after 498.1328 ms
17-02-28 20:16:21.269 -08 000000030 INF: Tilt Motor 3: Moved to 5.3891 after 498.0454 ms
17-02-28 20:16:21.270 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:21.270 -08 000000084 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:21.270 -08 000000025 INF: ======================================
17-02-28 20:16:21.270 -08 000000030 INF: ======================================
17-02-28 20:16:21.331 -08 000000023 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:21.331 -08 000000084 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:21.331 -08 000000084 INF: Tilt Motor 1: After move to 4.9747, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.331 -08 000000084 INF: Tilt Motor 1: Moved to 4.9761 after 559.8459 ms
17-02-28 20:16:21.331 -08 000000084 INF: ======================================
17-02-28 20:16:21.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:21.334 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:21.334 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97466185449253, m2=5.36396857296219, m3=5.39063857296219
17-02-28 20:16:21.340 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:16:21.349 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:16:21.349 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:21.349 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:21.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.350 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.353 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:16:21.353 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:16:21.353 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:16:21.393 -08 000000074 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:21.393 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.394 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:21.394 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1300 mm
17-02-28 20:16:21.394 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:16:21.457 -08 000000028 INF: FPGA: Recv ZTRG 
17-02-28 20:16:21.457 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:16:21.519 -08 000000060 INF: FPGA: Recv ZYT 
17-02-28 20:16:21.519 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:16:21.519 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:16:21.581 -08 000000066 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:16:21.581 -08 000000066 INF: FPGA: Recv ZMV 
17-02-28 20:16:21.581 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:16:21.581 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9808 ms
17-02-28 20:16:21.581 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:16:21.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:21.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 8 of 30 seconds left===================
17-02-28 20:16:21.643 -08 000000032 INF: FPGA: Recv ZDACR 60292
17-02-28 20:16:21.643 -08 000000018 INF: Z Motor: MoveAndTrigger took 249.476 ms w/comms
17-02-28 20:16:21.643 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:21.643 -08 000000018 INF: Z Motor: MoveAbsStepped took 249.657 ms
17-02-28 20:16:21.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.644 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.653 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:16:21.653 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:16:21.705 -08 000000068 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:21.716 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:21.717 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:16:21.725 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:21.725 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.725 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:21.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:21.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:21.728 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:21.728 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:16:21.729 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:21.729 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:21.730 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:16:21.730 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:21.731 -08 000000044 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:21.731 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:21.732 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:21.732 -08 000000075 INF: ===================Move X Motor without settling===================
17-02-28 20:16:21.732 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:21.732 -08 000000075 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:21.732 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:21.733 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:21.733 -08 000000025 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:21.733 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:21.733 -08 000000025 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8383 mm
17-02-28 20:16:21.733 -08 000000025 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:21.733 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:21.733 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:21.733 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:21.734 -08 000000099 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:21.734 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:21.734 -08 000000089 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:21.734 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:21.734 -08 000000037 INF: ======================================
17-02-28 20:16:21.734 -08 000000082 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:21.735 -08 000000089 INF: ======================================
17-02-28 20:16:21.735 -08 000000082 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:21.735 -08 000000099 INF: ======================================
17-02-28 20:16:21.735 -08 000000053 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:21.735 -08 000000082 INF: ======================================
17-02-28 20:16:21.735 -08 000000051 INF: ======================================
17-02-28 20:16:21.735 -08 000000053 INF: ======================================
17-02-28 20:16:21.736 -08 000000071 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:21.736 -08 000000032 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:21.736 -08 000000046 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:21.737 -08 000000071 INF: ======================================
17-02-28 20:16:21.737 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:21.737 -08 000000038 INF: ======================================
17-02-28 20:16:21.737 -08 000000032 INF: ======================================
17-02-28 20:16:21.738 -08 000000046 INF: ======================================
17-02-28 20:16:21.738 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:21.739 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:21.740 -08 000000060 INF: ======================================
17-02-28 20:16:21.740 -08 000000059 INF: ======================================
17-02-28 20:16:21.741 -08 000000064 INF: ======================================
17-02-28 20:16:21.769 -08 000000075 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:21.769 -08 000000075 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:21.770 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:21.770 -08 000000025 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:21.770 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:21.831 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:21.831 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Moving to 25.4939 mm @15.000 mm/sec, started at 23.2993 mm
17-02-28 20:16:21.831 -08 000000075 INF: X Motor: Xmit MA -13724\n
17-02-28 20:16:21.893 -08 000000075 INF: X Motor: Recv MA -13724\r\n>
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:21.893 -08 000000075 INF: X Motor: WaitUntilStopped 60146
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:16:21.893 -08 000000025 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:16:21.959 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:21.959 -08 000000025 INF: Y Motor: Start the move command
17-02-28 20:16:21.959 -08 000000025 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:22.021 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:22.021 -08 000000025 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:16:22.021 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.145 -08 000000025 INF: Y Motor: Unshifted Position: 1065716
17-02-28 20:16:22.195 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.320 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.456 -08 000000025 INF: Y Motor: Unshifted Position: 1766336
17-02-28 20:16:22.506 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.518 -08 000000075 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:22.583 -08 000000075 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:22.583 -08 000000075 INF: X Motor: Moved to 25.4941 after 690 ms
17-02-28 20:16:22.583 -08 000000075 INF: ======================================
17-02-28 20:16:22.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:22.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 7 of 30 seconds left===================
17-02-28 20:16:22.633 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.769 -08 000000025 INF: Y Motor: Unshifted Position: 2551349
17-02-28 20:16:22.819 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:22.943 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.079 -08 000000025 INF: Y Motor: Unshifted Position: 3327139
17-02-28 20:16:23.129 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.258 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.393 -08 000000025 INF: Y Motor: Unshifted Position: 4113042
17-02-28 20:16:23.443 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.569 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:23.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 6 of 30 seconds left===================
17-02-28 20:16:23.705 -08 000000025 INF: Y Motor: Unshifted Position: 4885465
17-02-28 20:16:23.755 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:23.879 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:24.015 -08 000000025 INF: Y Motor: Unshifted Position: 5666921
17-02-28 20:16:24.065 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:24.194 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:24.329 -08 000000025 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:16:24.329 -08 000000025 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:24.329 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:24.391 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:24.391 -08 000000025 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:16:24.391 -08 000000025 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:24.453 -08 000000025 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:24.453 -08 000000025 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:24.453 -08 000000025 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:24.514 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:24.514 -08 000000025 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:24.514 -08 000000025 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:24.576 -08 000000025 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:24.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:24.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 5 of 30 seconds left===================
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: Recv v 0\r
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:24.641 -08 000000025 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:24.703 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:24.703 -08 000000025 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:24.703 -08 000000025 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:24.765 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:16:24.765 -08 000000025 INF: ======================================
17-02-28 20:16:24.766 -08 000000044 INF: ===================Move X,Y===================
17-02-28 20:16:24.768 -08 000000044 INF: ======================================
17-02-28 20:16:24.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:24.771 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:24.772 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:16:24.772 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:16:24.827 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:24.827 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:16:24.887 -08 000000058 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:24.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:24.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:24.888 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:24.949 -08 000000047 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:16:24.949 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:16:24.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:24.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:24.951 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:24.951 -08 000000050 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:24.951 -08 000000050 INF: ======================================
17-02-28 20:16:24.952 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:24.952 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:24.954 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:16:24.955 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:24.955 -08 000000085 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:16:25.011 -08 000000037 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:25.012 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:16:25.014 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:25.014 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:16:25.077 -08 000000068 INF: FPGA: Recv TDIYARM2
17-02-28 20:16:25.078 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:16:25.080 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:25.082 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:25.083 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:25.085 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:16:25.086 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:16:25.088 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:25.466 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:16:25.466 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:16:25.466 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:25.482 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:16:25.484 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:25.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:25.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 4 of 30 seconds left===================
17-02-28 20:16:25.862 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53955465288 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:16:25.863 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:16:25.863 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:25.878 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:16:25.880 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:16:25.882 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:25.884 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:25.885 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:25.886 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:25.888 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:25.888 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:25.888 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:16:25.888 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:16:25.947 -08 000000052 INF: FPGA: Recv ZYT 
17-02-28 20:16:25.947 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:16:25.947 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:16:26.013 -08 000000075 INF: FPGA: Recv ZARM
17-02-28 20:16:26.013 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.8987 ms
17-02-28 20:16:26.013 -08 000000085 INF: Z Motor: ArmAbsStepped took 124.7801 ms
17-02-28 20:16:26.014 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:26.016 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:16:26.018 -08 000000085 INF: ======================================
17-02-28 20:16:26.019 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:26.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:26.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.022 -08 000000047 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:26.023 -08 000000047 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:26.023 -08 000000060 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:26.023 -08 000000047 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:26.023 -08 000000047 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:26.023 -08 000000047 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:26.023 -08 000000060 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:26.023 -08 000000060 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:26.023 -08 000000060 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:26.024 -08 000000060 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:26.447 -08 000000071 INF: FPGA: Recv EX1MV
17-02-28 20:16:26.447 -08 000000071 INF: FPGA: Recv EX2MV
17-02-28 20:16:26.447 -08 000000060 INF: Excitation Filter 2: Moved -107 steps in 423.0455 ms
17-02-28 20:16:26.447 -08 000000047 INF: Excitation Filter 1: Moved -107 steps in 423.3283 ms
17-02-28 20:16:26.447 -08 000000047 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 423.5826 ms
17-02-28 20:16:26.447 -08 000000060 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 423.1918 ms
17-02-28 20:16:26.447 -08 000000060 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 423.4838 ms
17-02-28 20:16:26.447 -08 000000047 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 423.6978 ms
17-02-28 20:16:26.448 -08 000000060 INF: ======================================
17-02-28 20:16:26.448 -08 000000047 INF: ======================================
17-02-28 20:16:26.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.450 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:26.451 -08 000000053 INF: ===================Serial===================
17-02-28 20:16:26.451 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:26.451 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:16:26.451 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:26.452 -08 000000039 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:16:26.452 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:26.452 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:26.452 -08 000000053 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:16:26.452 -08 000000066 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:26.452 -08 000000066 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:26.453 -08 000000053 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:26.453 -08 000000037 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:26.454 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:16:26.454 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:16:26.455 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.455 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.455 -08 000000010 INF: RunCopyService queue size at 2/28/2017 8:16:26 PM is 2
17-02-28 20:16:26.456 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.456 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.512 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.512 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:26.512 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:26.574 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.574 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:26.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:26.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 3 of 30 seconds left===================
17-02-28 20:16:26.605 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.605 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.606 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.606 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:16:26.640 -08 000000039 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:16:26.699 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.699 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:16:26.699 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:26.755 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.755 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.756 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.756 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.761 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:26.761 -08 000000039 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:16:26.761 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:26.888 -08 000000039 INF: Y Motor: Unshifted Position: 5928637
17-02-28 20:16:26.905 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.905 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.906 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:26.906 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:26.938 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.055 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:16:27.055 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:16:27.055 -08 000000051 INF: ===================Camera #2 Frame #1===================
17-02-28 20:16:27.056 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:16:27.056 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:16:27.056 -08 000000085 INF: ===================Camera #0 Frame #1===================
17-02-28 20:16:27.062 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.198 -08 000000039 INF: Y Motor: Unshifted Position: 5880980
17-02-28 20:16:27.209 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:16:27.209 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:16:27.209 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:16:27.209 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:16:27.209 -08 000000085 INF: ===================Camera #0 Frame #3===================
17-02-28 20:16:27.209 -08 000000051 INF: ===================Camera #2 Frame #3===================
17-02-28 20:16:27.248 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.365 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:16:27.365 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:16:27.365 -08 000000085 INF: ===================Camera #0 Frame #4===================
17-02-28 20:16:27.366 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:16:27.366 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:16:27.366 -08 000000051 INF: ===================Camera #2 Frame #4===================
17-02-28 20:16:27.375 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.510 -08 000000039 INF: Y Motor: Unshifted Position: 5834978
17-02-28 20:16:27.518 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:27.518 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:27.518 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:27.519 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:27.519 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:27.519 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:27.560 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.571 -08 000000059 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:27.571 -08 000000053 INF: ===================Serial===================
17-02-28 20:16:27.573 -08 000000053 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:16:27.573 -08 000000053 INF: ===================Serial===================
17-02-28 20:16:27.574 -08 000000053 INF: ======================================
17-02-28 20:16:27.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:27.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 2 of 30 seconds left===================
17-02-28 20:16:27.637 -08 000000089 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:27.638 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:27.640 -08 000000066 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:27.641 -08 000000032 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:27.641 -08 000000046 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:27.641 -08 000000032 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:27.641 -08 000000032 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:27.641 -08 000000032 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:27.641 -08 000000046 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:27.641 -08 000000046 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:27.641 -08 000000046 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:27.641 -08 000000032 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:27.642 -08 000000046 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:27.671 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:16:27.671 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:16:27.671 -08 000000085 INF: ===================Camera #0 Frame #6===================
17-02-28 20:16:27.672 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:16:27.672 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:16:27.672 -08 000000051 INF: ===================Camera #2 Frame #6===================
17-02-28 20:16:27.674 -08 000000085 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:16:27.675 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:27.675 -08 000000051 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:16:27.677 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:27.687 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:27.712 -08 000000051 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:27.712 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:16:27.713 -08 000000051 INF: ======================================
17-02-28 20:16:27.721 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:27.721 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:16:27.722 -08 000000085 INF: ======================================
17-02-28 20:16:27.723 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:16:27.725 -08 000000037 INF: ======================================
17-02-28 20:16:27.823 -08 000000039 INF: Y Motor: Unshifted Position: 5790760
17-02-28 20:16:27.873 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:28.009 -08 000000039 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:16:28.009 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:28.009 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:28.072 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:16:28.072 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:16:28.072 -08 000000046 INF: Excitation Filter 1: Moved 107 steps in 430.8609 ms
17-02-28 20:16:28.072 -08 000000032 INF: Excitation Filter 2: Moved 107 steps in 431.0369 ms
17-02-28 20:16:28.072 -08 000000046 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 431.0354 ms
17-02-28 20:16:28.072 -08 000000046 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 431.1696 ms
17-02-28 20:16:28.072 -08 000000032 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 431.2039 ms
17-02-28 20:16:28.072 -08 000000032 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 431.3791 ms
17-02-28 20:16:28.073 -08 000000046 INF: ======================================
17-02-28 20:16:28.073 -08 000000032 INF: ======================================
17-02-28 20:16:28.074 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:28.074 -08 000000039 INF: Y Motor: Moved to 62.9074 after 1313 ms
17-02-28 20:16:28.074 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:28.074 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:28.075 -08 000000066 INF: ======================================
17-02-28 20:16:28.136 -08 000000039 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:28.136 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:28.136 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:28.198 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:28.198 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:28.198 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:28.260 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:28.322 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:28.384 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:28.384 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:28.384 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:28.446 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:16:28.446 -08 000000039 INF: ======================================
17-02-28 20:16:28.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:28.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:16:28.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.449 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:28.507 -08 000000089 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:28.507 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:28.569 -08 000000060 INF: FPGA: Recv TDIYERD 6290744
17-02-28 20:16:28.569 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:28.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:28.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Delay 1 of 30 seconds left===================
17-02-28 20:16:28.631 -08 000000074 INF: FPGA: Recv ZADCR 2423
17-02-28 20:16:28.631 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:16:28.631 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:28.696 -08 000000059 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:16:28.696 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:16:28.696 -08 000000018 INF: TDIScan finished after 6978.7708 ms
17-02-28 20:16:28.696 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:16:28.696 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:16:28.696 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:28.759 -08 000000051 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:28.760 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.760 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.761 -08 000000045 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:28.761 -08 000000071 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:28.761 -08 000000032 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:28.761 -08 000000071 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:28.761 -08 000000071 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:28.761 -08 000000045 INF: ======================================
17-02-28 20:16:28.762 -08 000000032 INF: ======================================
17-02-28 20:16:28.822 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:16:28.822 -08 000000071 INF: ======================================
17-02-28 20:16:28.823 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.824 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:28.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:28.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:28.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:28.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:28.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:28.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:28.975 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:16:28.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:28.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:16:28.983 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:16:29.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.585 -08 000000042 INF: WaitCommand(30000) end
17-02-28 20:16:29.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:16:29.605 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:16:29.628 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0684313924307333Best Z position at top surface = -0.140779233947629Best Z position at top surface + compensator offset = -0.118079233947629 C:3,L:8,T
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.140779233947629
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.82151
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0684313924307333
17-02-28 20:16:29.629 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.47306
17-02-28 20:16:29.629 -08 000000018 INF: Z-height at LaneTopSurface is -0.140779233947629.
17-02-28 20:16:29.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:29.766 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:29.766 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:29.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.818 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:29.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:16:29.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:16:29.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:29.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:29.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:29.820 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:29.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:29.821 -08 000000060 INF: ===================Move Tilt Motor 1===================
17-02-28 20:16:29.821 -08 000000066 INF: ===================Move Tilt Motor 2===================
17-02-28 20:16:29.821 -08 000000028 INF: ===================Move Tilt Motor 3===================
17-02-28 20:16:29.822 -08 000000060 INF: Tilt Motor 1: Moving to 4.9712 mm, started at 4.9761 mm, delta = -0.0049 mm
17-02-28 20:16:29.822 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:29.822 -08 000000066 INF: Tilt Motor 2: Moving to 5.3660 mm, started at 5.3635 mm, delta = 0.0026 mm
17-02-28 20:16:29.822 -08 000000028 INF: Tilt Motor 3: Moving to 5.3927 mm, started at 5.3891 mm, delta = 0.0036 mm
17-02-28 20:16:29.823 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:29.825 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:29.880 -08 000000059 INF: FPGA: Recv T1RD 19591
17-02-28 20:16:29.880 -08 000000059 INF: FPGA: Recv T2RD 21116
17-02-28 20:16:29.880 -08 000000059 INF: FPGA: Recv T3RD 21216
17-02-28 20:16:29.880 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3519 + 2/6
17-02-28 20:16:29.880 -08 000000066 INF: Tilt Motor 2: Moving to 21126 encoder counts
17-02-28 20:16:29.880 -08 000000066 INF: FPGA: Xmit T2MOVETO 21126\n
17-02-28 20:16:29.880 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3536 + 0/6
17-02-28 20:16:29.880 -08 000000028 INF: Tilt Motor 3: Moving to 21231 encoder counts
17-02-28 20:16:29.881 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:29.881 -08 000000028 INF: FPGA: Xmit T3MOVETO 21231\n
17-02-28 20:16:29.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Selecting Reagent HB2 (8)===================
17-02-28 20:16:29.881 -08 000000042 INF: Valve B1: Go to position 8
17-02-28 20:16:29.881 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:16:29.881 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3265 + 1/6
17-02-28 20:16:29.881 -08 000000060 INF: Tilt Motor 1: Moving to 19572 encoder counts
17-02-28 20:16:29.882 -08 000000060 INF: FPGA: Xmit T1MOVETO 19572\n
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 1\r
17-02-28 20:16:29.943 -08 000000042 INF: Valve B1: 110.494 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:16:29.943 -08 000000042 INF: Valve B1: Taking shortest path 'CC' from 1 to 8
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CC8\r
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:16:29.943 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:16:30.004 -08 000000059 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:16:30.004 -08 000000059 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:16:30.004 -08 000000059 INF: FPGA: Recv T1MOVETO 3
17-02-28 20:16:30.004 -08 000000060 INF: Tilt Motor 1: To move from 4.976 to 4.971 (-0.005 mm) should take 3 steps, but required 3 steps (0.005 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:16:30.004 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:30.004 -08 000000028 INF: Tilt Motor 3: To move from 5.389 to 5.393 (0.004 mm) should take 2 steps, but required 1 steps (0.002 mm). Slippage = -0.002 mm (-0.43%)
17-02-28 20:16:30.004 -08 000000066 INF: Tilt Motor 2: To move from 5.363 to 5.366 (0.003 mm) should take 2 steps, but required 1 steps (0.002 mm). Slippage = -0.002 mm (-0.60%)
17-02-28 20:16:30.005 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:30.007 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:30.066 -08 000000047 INF: FPGA: Recv T1RD 19573
17-02-28 20:16:30.066 -08 000000047 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:30.066 -08 000000047 INF: FPGA: Recv T2RD 21122
17-02-28 20:16:30.066 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3262 + 1/6
17-02-28 20:16:30.066 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:30.066 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:30.066 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3520 + 2/6
17-02-28 20:16:30.067 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:30.069 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:30.131 -08 000000053 INF: FPGA: Recv T1RD 19573
17-02-28 20:16:30.131 -08 000000053 INF: FPGA: Recv T2RD 21122
17-02-28 20:16:30.131 -08 000000053 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:30.131 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:30.131 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3262 + 1/6
17-02-28 20:16:30.131 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3520 + 2/6
17-02-28 20:16:30.131 -08 000000028 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:30.134 -08 000000060 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:30.135 -08 000000066 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:30.194 -08 000000071 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:30.194 -08 000000071 INF: FPGA: Recv T1RD 19573
17-02-28 20:16:30.194 -08 000000071 INF: FPGA: Recv T2RD 21122
17-02-28 20:16:30.194 -08 000000066 INF: Tilt Motor 2: Encoder: at motor step 3520 + 2/6
17-02-28 20:16:30.194 -08 000000066 INF: Tilt Motor 2: After move to 5.3660, error = -0.0010, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:30.194 -08 000000060 INF: Tilt Motor 1: Encoder: at motor step 3262 + 1/6
17-02-28 20:16:30.194 -08 000000028 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:30.194 -08 000000066 INF: Tilt Motor 2: Moved to 5.3650 after 372.3192 ms
17-02-28 20:16:30.194 -08 000000028 INF: Tilt Motor 3: After move to 5.3927, error = -0.0015, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:30.194 -08 000000060 INF: Tilt Motor 1: After move to 4.9712, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:30.194 -08 000000028 INF: Tilt Motor 3: Moved to 5.3912 after 372.3404 ms
17-02-28 20:16:30.194 -08 000000060 INF: Tilt Motor 1: Moved to 4.9715 after 372.5731 ms
17-02-28 20:16:30.194 -08 000000066 INF: ======================================
17-02-28 20:16:30.194 -08 000000028 INF: ======================================
17-02-28 20:16:30.194 -08 000000060 INF: ======================================
17-02-28 20:16:30.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.196 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.197 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97119932871621, m2=5.3660158557841, m3=5.3926858557841
17-02-28 20:16:30.197 -08 000000018 INF: ETF Best Z: -0.1180792 mm (30953 DAC)
17-02-28 20:16:30.197 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.198 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.198 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:16:30.198 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:16:30.631 -08 000000059 INF: FPGA: Recv MIOCOMPF
17-02-28 20:16:30.631 -08 000000018 INF: Compensator: Moved IntoPath in 433 ms
17-02-28 20:16:30.632 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:16:30.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:30.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:16:30.633 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:30.639 -08 000000018 INF: Swath 1 position calculated to be: {X=24.93993, Y=39.70011} from estimated center X= 25.417, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:16:30.639 -08 000000018 INF: Swath 2 position calculated to be: {X=26.04793, Y=39.70011} from estimated center X= 25.417, Y= 39.45999 on surface LaneTopSurface
17-02-28 20:16:30.645 -08 000000018 INF: Swath 0: Converted transform from (161.478, 0.2340389) pixels to (0.055545, 0) mm.
17-02-28 20:16:30.651 -08 000000018 INF: Swath 1: Converted transform from (137.0953, 1.027979) pixels to (0.047265, 0.000345) mm.
17-02-28 20:16:30.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:30.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:30.652 -08 000000018 INF: Transformed XStagePosition from 24.93993 mm to 24.995474960655 mm.
17-02-28 20:16:30.663 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4901163330078 mm.
17-02-28 20:16:30.663 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2901163330078 mm.
17-02-28 20:16:30.663 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3808663330078 mm.
17-02-28 20:16:30.665 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:30.666 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:30.666 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:30.666 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:16:30.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:30.674 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:30.675 -08 000000071 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:30.675 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:16:30.675 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:30.676 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:30.676 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:30.676 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:30.676 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:30.676 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:16:30.676 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:30.676 -08 000000028 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:30.677 -08 000000028 INF: Z Motor: Moving to -0.1381 mm, started at -0.0100 mm
17-02-28 20:16:30.677 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000028 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:16:30.677 -08 000000101 INF: ===================Move X Motor without settling===================
17-02-28 20:16:30.677 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000106 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:30.677 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:30.677 -08 000000101 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:30.677 -08 000000106 INF: Y Motor: Moving to 64.4901 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:16:30.677 -08 000000106 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:30.677 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000090 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:30.678 -08 000000095 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000058 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:30.678 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:30.678 -08 000000090 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:30.678 -08 000000064 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:30.678 -08 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000052 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:30.678 -08 000000090 INF: ======================================
17-02-28 20:16:30.678 -08 000000023 INF: ======================================
17-02-28 20:16:30.678 -08 000000058 INF: ======================================
17-02-28 20:16:30.679 -08 000000052 INF: ======================================
17-02-28 20:16:30.679 -08 000000039 INF: ======================================
17-02-28 20:16:30.679 -08 000000095 INF: ======================================
17-02-28 20:16:30.679 -08 000000064 INF: ======================================
17-02-28 20:16:30.680 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:30.680 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:30.680 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:30.681 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:30.681 -08 000000037 INF: ======================================
17-02-28 20:16:30.681 -08 000000066 INF: ======================================
17-02-28 20:16:30.681 -08 000000098 INF: ======================================
17-02-28 20:16:30.682 -08 000000047 INF: ======================================
17-02-28 20:16:30.682 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:30.683 -08 000000051 INF: ======================================
17-02-28 20:16:30.684 -08 000000071 INF: ======================================
17-02-28 20:16:30.696 -08 000000010 INF: FPGA: Recv ZTRG 
17-02-28 20:16:30.696 -08 000000028 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:16:30.755 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:16:30.755 -08 000000028 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:16:30.755 -08 000000028 INF: FPGA: Xmit ZMV 36196\n
17-02-28 20:16:30.757 -08 000000101 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:30.757 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:30.757 -08 000000101 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:30.757 -08 000000106 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:30.757 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:30.817 -08 000000084 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:16:30.817 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:30.819 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Moving to 24.9955 mm @15.000 mm/sec, started at 25.4941 mm
17-02-28 20:16:30.819 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:30.819 -08 000000101 INF: X Motor: Xmit MA -13928\n
17-02-28 20:16:30.881 -08 000000101 INF: X Motor: Recv MA -13928\r\n>
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:30.881 -08 000000101 INF: X Motor: WaitUntilStopped 60033
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Set target position to 5949012 encoder counts
17-02-28 20:16:30.881 -08 000000106 INF: Y Motor: Xmit s r0xca 5949012\r
17-02-28 20:16:30.941 -08 000000084 INF: FPGA: Recv ZMV 
17-02-28 20:16:30.941 -08 000000028 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.8925 ms
17-02-28 20:16:30.941 -08 000000028 INF: FPGA: Xmit ZDACR\n
17-02-28 20:16:30.943 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:30.943 -08 000000106 INF: Y Motor: Start the move command
17-02-28 20:16:30.943 -08 000000106 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:31.003 -08 000000098 INF: FPGA: Recv ZDACR 36196
17-02-28 20:16:31.003 -08 000000028 INF: Z Motor: MoveAndTrigger took 326.3551 ms w/comms
17-02-28 20:16:31.003 -08 000000028 INF: Z Motor: After move to -0.1381, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:31.003 -08 000000028 INF: Z Motor: MoveAbsStepped took 326.5213 ms
17-02-28 20:16:31.003 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:31.005 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:31.005 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:16:31.005 -08 000000106 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:16:31.005 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:31.006 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.006 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:16:31.006 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.007 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:31.007 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:31.007 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:31.007 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:31.008 -08 000000038 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:16:31.065 -08 000000050 INF: FPGA: Recv ZSEL 
17-02-28 20:16:31.066 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:31.066 -08 000000038 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:16:31.127 -08 000000066 INF: FPGA: Recv TDIBB
17-02-28 20:16:31.127 -08 000000038 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:31.128 -08 000000038 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:31.129 -08 000000106 INF: Y Motor: Unshifted Position: 5872224
17-02-28 20:16:31.129 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.130 -08 000000038 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:16:31.130 -08 000000038 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:16:31.130 -08 000000038 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:16:31.179 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:31.192 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:31.192 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.194 -08 000000038 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:31.194 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.196 -08 000000038 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:31.196 -08 000000038 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:31.196 -08 000000038 INF: Z Motor: Arming to move to -0.0981 mm
17-02-28 20:16:31.196 -08 000000038 INF: FPGA: Xmit ZYT 6429012 4\n
17-02-28 20:16:31.254 -08 000000039 INF: FPGA: Recv ZYT 
17-02-28 20:16:31.254 -08 000000038 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372224 enc / 63.722 mm / ) = 6429012 enc / 64.290 mm
17-02-28 20:16:31.254 -08 000000038 INF: FPGA: Xmit ZARM 25710\n
17-02-28 20:16:31.306 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:31.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:31.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:31.314 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:31.316 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:16:31.316 -08 000000038 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0279 ms
17-02-28 20:16:31.316 -08 000000038 INF: Z Motor: ArmAbsStepped took 119.7291 ms
17-02-28 20:16:31.316 -08 000000038 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:31.317 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.318 -08 000000101 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:31.319 -08 000000038 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:31.319 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.321 -08 000000038 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:31.321 -08 000000038 INF: ===================TDI Scan Setup===================
17-02-28 20:16:31.322 -08 000000038 INF: ======================================
17-02-28 20:16:31.379 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:31.380 -08 000000101 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:31.380 -08 000000101 INF: X Motor: Moved to 24.9961 after 499 ms
17-02-28 20:16:31.380 -08 000000101 INF: ======================================
17-02-28 20:16:31.387 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 60, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:16:31.442 -08 000000106 INF: Y Motor: Unshifted Position: 5949014
17-02-28 20:16:31.442 -08 000000106 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:31.442 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:31.479 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:16:31.504 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:31.504 -08 000000106 INF: Y Motor: Moved to 64.4901 after 499 ms
17-02-28 20:16:31.504 -08 000000106 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:31.565 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:16:31.565 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:16:31.566 -08 000000106 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:31.566 -08 000000106 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:31.566 -08 000000106 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:31.628 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:31.628 -08 000000106 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:31.628 -08 000000106 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:31.665 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:31.693 -08 000000106 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:31.754 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: Recv v 0\r
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:31.755 -08 000000106 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:31.817 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:31.817 -08 000000106 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:31.817 -08 000000106 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:31.854 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:31.879 -08 000000106 INF: Y Motor: Recv ok\r
17-02-28 20:16:31.879 -08 000000106 INF: ======================================
17-02-28 20:16:31.880 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:16:31.881 -08 000000075 INF: ======================================
17-02-28 20:16:31.940 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:31.980 -08 000000051 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:31.980 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:31.980 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:31.995 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:31.997 -08 000000051 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:32.190 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:32.254 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:32.354 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:16:32.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:32.540 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:32.564 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:32.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Aspirating port PortB===================
17-02-28 20:16:32.664 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V1600IP11520R\r
17-02-28 20:16:32.752 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:32.852 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:32.940 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.021 -08 000000051 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:33.021 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:33.021 -08 000000051 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:33.036 -08 000000051 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:33.038 -08 000000051 INF: ===================Camera Arm TDI===================
17-02-28 20:16:33.039 -08 000000051 INF: ======================================
17-02-28 20:16:33.040 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:33.041 -08 000000028 INF: ======================================
17-02-28 20:16:33.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:33.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:33.043 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:16:33.043 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:16:33.128 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:33.128 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:16:33.188 -08 000000098 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:33.188 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:33.188 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:33.188 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:33.190 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:33.250 -08 000000051 INF: FPGA: Recv TDIYERD 6449013
17-02-28 20:16:33.250 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449013 counts (64.490 mm)
17-02-28 20:16:33.250 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:33.251 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.251 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:33.251 -08 000000025 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:33.251 -08 000000082 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:33.252 -08 000000082 INF: ======================================
17-02-28 20:16:33.252 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:33.253 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:33.253 -08 000000025 INF: FPGA: Xmit TDIYPOS 6338087\n
17-02-28 20:16:33.312 -08 000000030 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:33.312 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:33.313 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:33.314 -08 000000025 INF: FPGA: Xmit TDIYARM3 139264 6429012 1 1\n
17-02-28 20:16:33.375 -08 000000059 INF: FPGA: Recv TDIYARM3
17-02-28 20:16:33.375 -08 000000025 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:33.376 -08 000000025 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:33.377 -08 000000025 INF: ======================================
17-02-28 20:16:33.378 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:33.379 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:33.379 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.379 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.381 -08 000000079 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:33.381 -08 000000053 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:33.381 -08 000000079 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:33.381 -08 000000079 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:33.381 -08 000000079 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:33.381 -08 000000053 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:33.381 -08 000000079 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:33.381 -08 000000053 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:33.381 -08 000000053 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:33.382 -08 000000053 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:33.501 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:33.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.750 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:16:33.750 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:16:33.750 -08 000000053 INF: Excitation Filter 1: Moved -107 steps in 368.8645 ms
17-02-28 20:16:33.750 -08 000000053 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.9877 ms
17-02-28 20:16:33.750 -08 000000079 INF: Excitation Filter 2: Moved -107 steps in 369.0797 ms
17-02-28 20:16:33.750 -08 000000079 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.2071 ms
17-02-28 20:16:33.750 -08 000000079 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.277 ms
17-02-28 20:16:33.750 -08 000000053 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.0969 ms
17-02-28 20:16:33.750 -08 000000079 INF: ======================================
17-02-28 20:16:33.751 -08 000000053 INF: ======================================
17-02-28 20:16:33.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:33.753 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:33.753 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:33.753 -08 000000044 INF: ===================FPGA Z Wait===================
17-02-28 20:16:33.753 -08 000000095 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:33.754 -08 000000044 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:33.754 -08 000000095 INF: Y Motor: Moving to 14.8418 mm @6.500 mm/sec, started at 64.4901 mm
17-02-28 20:16:33.754 -08 000000095 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:33.754 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:33.754 -08 000000068 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:33.754 -08 000000066 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:33.755 -08 000000066 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:33.755 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:16:33.755 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:33.757 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.757 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.757 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.757 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:33.815 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:33.815 -08 000000095 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:33.815 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:33.874 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:33.875 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:33.875 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:33.907 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.907 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:33.907 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.907 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Set target position to 984178 encoder counts
17-02-28 20:16:33.937 -08 000000095 INF: Y Motor: Xmit s r0xca 984178\r
17-02-28 20:16:34.001 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:34.001 -08 000000095 INF: Y Motor: Start the move command
17-02-28 20:16:34.001 -08 000000095 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:34.057 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:34.057 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:34.057 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:34.057 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:34.063 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:34.063 -08 000000095 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:16:34.063 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:34.124 -08 000000030 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:34.124 -08 000000044 INF: ======================================
17-02-28 20:16:34.187 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:34.188 -08 000000095 INF: Y Motor: Unshifted Position: 5885855
17-02-28 20:16:34.207 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:34.207 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:34.207 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:34.207 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:34.207 -08 000000032 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:34.207 -08 000000084 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:34.238 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.365 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.373 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:34.373 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:34.373 -08 000000032 INF: ===================Camera #0 Frame #11===================
17-02-28 20:16:34.374 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:34.374 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:34.374 -08 000000084 INF: ===================Camera #2 Frame #11===================
17-02-28 20:16:34.437 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:34.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:34.501 -08 000000095 INF: Y Motor: Unshifted Position: 5684794
17-02-28 20:16:34.543 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:16:34.543 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:16:34.543 -08 000000032 INF: ===================Camera #0 Frame #17===================
17-02-28 20:16:34.545 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:16:34.545 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:16:34.545 -08 000000084 INF: ===================Camera #2 Frame #17===================
17-02-28 20:16:34.551 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.674 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.713 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:16:34.713 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:16:34.713 -08 000000032 INF: ===================Camera #0 Frame #23===================
17-02-28 20:16:34.715 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:16:34.715 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:16:34.715 -08 000000084 INF: ===================Camera #2 Frame #23===================
17-02-28 20:16:34.750 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:34.812 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:34.813 -08 000000095 INF: Y Motor: Unshifted Position: 5481350
17-02-28 20:16:34.863 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:34.883 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:16:34.883 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:16:34.883 -08 000000032 INF: ===================Camera #0 Frame #29===================
17-02-28 20:16:34.886 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:16:34.886 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:16:34.886 -08 000000084 INF: ===================Camera #2 Frame #30===================
17-02-28 20:16:34.987 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.053 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:16:35.053 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:16:35.053 -08 000000032 INF: ===================Camera #0 Frame #36===================
17-02-28 20:16:35.060 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:16:35.060 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:16:35.060 -08 000000084 INF: ===================Camera #2 Frame #36===================
17-02-28 20:16:35.062 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:35.124 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:35.125 -08 000000095 INF: Y Motor: Unshifted Position: 5277670
17-02-28 20:16:35.175 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.225 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:16:35.225 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:16:35.225 -08 000000032 INF: ===================Camera #0 Frame #42===================
17-02-28 20:16:35.230 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:16:35.230 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:16:35.230 -08 000000084 INF: ===================Camera #2 Frame #42===================
17-02-28 20:16:35.299 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.374 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:35.394 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:16:35.394 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:16:35.394 -08 000000032 INF: ===================Camera #0 Frame #48===================
17-02-28 20:16:35.400 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:16:35.400 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:16:35.400 -08 000000084 INF: ===================Camera #2 Frame #48===================
17-02-28 20:16:35.435 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:35.436 -08 000000095 INF: Y Motor: Unshifted Position: 5074875
17-02-28 20:16:35.486 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.562 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:16:35.562 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:16:35.562 -08 000000032 INF: ===================Camera #0 Frame #54===================
17-02-28 20:16:35.569 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:16:35.569 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:16:35.569 -08 000000084 INF: ===================Camera #2 Frame #55===================
17-02-28 20:16:35.610 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.685 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:35.730 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:16:35.730 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:16:35.730 -08 000000032 INF: ===================Camera #0 Frame #61===================
17-02-28 20:16:35.742 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:16:35.742 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:16:35.742 -08 000000084 INF: ===================Camera #2 Frame #61===================
17-02-28 20:16:35.747 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:35.748 -08 000000095 INF: Y Motor: Unshifted Position: 4873164
17-02-28 20:16:35.798 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.902 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:35.902 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:35.902 -08 000000032 INF: ===================Camera #0 Frame #67===================
17-02-28 20:16:35.912 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:16:35.912 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:16:35.912 -08 000000084 INF: ===================Camera #2 Frame #67===================
17-02-28 20:16:35.921 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:35.997 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.058 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.059 -08 000000095 INF: Y Motor: Unshifted Position: 4669490
17-02-28 20:16:36.072 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:16:36.072 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:16:36.072 -08 000000032 INF: ===================Camera #0 Frame #73===================
17-02-28 20:16:36.083 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:16:36.083 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:16:36.083 -08 000000084 INF: ===================Camera #2 Frame #74===================
17-02-28 20:16:36.109 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.235 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.242 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:16:36.242 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:16:36.242 -08 000000032 INF: ===================Camera #0 Frame #79===================
17-02-28 20:16:36.258 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:16:36.258 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:16:36.258 -08 000000084 INF: ===================Camera #2 Frame #80===================
17-02-28 20:16:36.309 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.372 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.373 -08 000000095 INF: Y Motor: Unshifted Position: 4466032
17-02-28 20:16:36.412 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:16:36.412 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:16:36.412 -08 000000032 INF: ===================Camera #0 Frame #86===================
17-02-28 20:16:36.423 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.429 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:16:36.429 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:16:36.429 -08 000000084 INF: ===================Camera #2 Frame #86===================
17-02-28 20:16:36.548 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.585 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:16:36.585 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:16:36.585 -08 000000032 INF: ===================Camera #0 Frame #92===================
17-02-28 20:16:36.600 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:16:36.600 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:16:36.600 -08 000000084 INF: ===================Camera #2 Frame #93===================
17-02-28 20:16:36.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.682 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.683 -08 000000095 INF: Y Motor: Unshifted Position: 4264537
17-02-28 20:16:36.733 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.755 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:16:36.755 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:16:36.755 -08 000000032 INF: ===================Camera #0 Frame #98===================
17-02-28 20:16:36.774 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:16:36.774 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:16:36.774 -08 000000084 INF: ===================Camera #2 Frame #99===================
17-02-28 20:16:36.860 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:36.925 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:16:36.925 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:16:36.925 -08 000000032 INF: ===================Camera #0 Frame #105===================
17-02-28 20:16:36.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:36.945 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:16:36.945 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:16:36.945 -08 000000084 INF: ===================Camera #2 Frame #105===================
17-02-28 20:16:36.996 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:36.997 -08 000000095 INF: Y Motor: Unshifted Position: 4060214
17-02-28 20:16:37.047 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.098 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:16:37.098 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:16:37.098 -08 000000032 INF: ===================Camera #0 Frame #111===================
17-02-28 20:16:37.115 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:16:37.115 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:16:37.115 -08 000000084 INF: ===================Camera #2 Frame #112===================
17-02-28 20:16:37.171 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.246 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:37.268 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:16:37.268 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:16:37.268 -08 000000032 INF: ===================Camera #0 Frame #117===================
17-02-28 20:16:37.289 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:16:37.289 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:16:37.289 -08 000000084 INF: ===================Camera #2 Frame #118===================
17-02-28 20:16:37.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:37.309 -08 000000095 INF: Y Motor: Unshifted Position: 3858712
17-02-28 20:16:37.359 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.438 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:16:37.438 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:16:37.438 -08 000000032 INF: ===================Camera #0 Frame #123===================
17-02-28 20:16:37.459 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:16:37.459 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:16:37.459 -08 000000084 INF: ===================Camera #2 Frame #124===================
17-02-28 20:16:37.485 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.558 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:37.608 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:16:37.608 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:16:37.608 -08 000000032 INF: ===================Camera #0 Frame #130===================
17-02-28 20:16:37.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:37.621 -08 000000095 INF: Y Motor: Unshifted Position: 3654395
17-02-28 20:16:37.630 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:16:37.630 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:16:37.630 -08 000000084 INF: ===================Camera #2 Frame #131===================
17-02-28 20:16:37.671 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.760 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.780 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:16:37.780 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:16:37.781 -08 000000032 INF: ===================Camera #0 Frame #136===================
17-02-28 20:16:37.804 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:16:37.804 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:16:37.804 -08 000000084 INF: ===================Camera #2 Frame #137===================
17-02-28 20:16:37.870 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:37.885 -08 000000095 INF: Y Motor: Unshifted Position: 3481935
17-02-28 20:16:37.935 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:37.947 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:37.950 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:16:37.950 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:16:37.950 -08 000000032 INF: ===================Camera #0 Frame #142===================
17-02-28 20:16:37.974 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:16:37.974 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:16:37.974 -08 000000084 INF: ===================Camera #2 Frame #143===================
17-02-28 20:16:38.059 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.120 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:16:38.120 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:16:38.120 -08 000000032 INF: ===================Camera #0 Frame #149===================
17-02-28 20:16:38.145 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:16:38.145 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:16:38.145 -08 000000084 INF: ===================Camera #2 Frame #150===================
17-02-28 20:16:38.197 -08 000000095 INF: Y Motor: Unshifted Position: 3279143
17-02-28 20:16:38.197 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:38.247 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.261 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:38.292 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:16:38.292 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:16:38.292 -08 000000032 INF: ===================Camera #0 Frame #155===================
17-02-28 20:16:38.319 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:16:38.319 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:16:38.319 -08 000000084 INF: ===================Camera #2 Frame #156===================
17-02-28 20:16:38.373 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.462 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:16:38.462 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:16:38.462 -08 000000032 INF: ===================Camera #0 Frame #161===================
17-02-28 20:16:38.490 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:16:38.490 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:16:38.490 -08 000000084 INF: ===================Camera #2 Frame #162===================
17-02-28 20:16:38.511 -08 000000095 INF: Y Motor: Unshifted Position: 3077645
17-02-28 20:16:38.511 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:38.561 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.571 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:38.631 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:16:38.631 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:16:38.631 -08 000000032 INF: ===================Camera #0 Frame #167===================
17-02-28 20:16:38.661 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:16:38.661 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:16:38.661 -08 000000084 INF: ===================Camera #2 Frame #169===================
17-02-28 20:16:38.683 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.799 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:16:38.799 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:16:38.799 -08 000000032 INF: ===================Camera #0 Frame #174===================
17-02-28 20:16:38.821 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:38.822 -08 000000095 INF: Y Motor: Unshifted Position: 2874624
17-02-28 20:16:38.833 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:16:38.833 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:16:38.833 -08 000000084 INF: ===================Camera #2 Frame #175===================
17-02-28 20:16:38.872 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:38.885 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:38.970 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:16:38.970 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:16:38.970 -08 000000032 INF: ===================Camera #0 Frame #180===================
17-02-28 20:16:38.995 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.002 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:16:39.002 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:16:39.002 -08 000000084 INF: ===================Camera #2 Frame #181===================
17-02-28 20:16:39.132 -08 000000095 INF: Y Motor: Unshifted Position: 2670311
17-02-28 20:16:39.135 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:39.139 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:16:39.139 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:16:39.139 -08 000000032 INF: ===================Camera #0 Frame #186===================
17-02-28 20:16:39.173 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:16:39.173 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:16:39.173 -08 000000084 INF: ===================Camera #2 Frame #187===================
17-02-28 20:16:39.182 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.196 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:39.309 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:16:39.309 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:16:39.309 -08 000000032 INF: ===================Camera #0 Frame #192===================
17-02-28 20:16:39.311 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.344 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:39.344 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:39.344 -08 000000084 INF: ===================Camera #2 Frame #194===================
17-02-28 20:16:39.446 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:39.446 -08 000000095 INF: Y Motor: Unshifted Position: 2468813
17-02-28 20:16:39.477 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:16:39.477 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:16:39.477 -08 000000032 INF: ===================Camera #0 Frame #199===================
17-02-28 20:16:39.496 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.507 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:39.518 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:16:39.518 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:16:39.518 -08 000000084 INF: ===================Camera #2 Frame #200===================
17-02-28 20:16:39.621 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.650 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:16:39.650 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:16:39.650 -08 000000032 INF: ===================Camera #0 Frame #205===================
17-02-28 20:16:39.688 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:16:39.688 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:16:39.688 -08 000000084 INF: ===================Camera #2 Frame #206===================
17-02-28 20:16:39.757 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:39.757 -08 000000095 INF: Y Motor: Unshifted Position: 2265789
17-02-28 20:16:39.807 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.818 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:39.820 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:16:39.820 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:16:39.820 -08 000000032 INF: ===================Camera #0 Frame #211===================
17-02-28 20:16:39.859 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:16:39.859 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:16:39.859 -08 000000084 INF: ===================Camera #2 Frame #213===================
17-02-28 20:16:39.933 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:39.990 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:16:39.990 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:16:39.990 -08 000000032 INF: ===================Camera #0 Frame #217===================
17-02-28 20:16:40.033 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:16:40.033 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:16:40.033 -08 000000084 INF: ===================Camera #2 Frame #219===================
17-02-28 20:16:40.068 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:40.072 -08 000000095 INF: Y Motor: Unshifted Position: 2061692
17-02-28 20:16:40.122 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.130 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:40.160 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:16:40.160 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:16:40.160 -08 000000032 INF: ===================Camera #0 Frame #224===================
17-02-28 20:16:40.204 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:40.204 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:16:40.204 -08 000000084 INF: ===================Camera #2 Frame #225===================
17-02-28 20:16:40.245 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.333 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:16:40.333 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:16:40.333 -08 000000032 INF: ===================Camera #0 Frame #230===================
17-02-28 20:16:40.375 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:16:40.375 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:16:40.375 -08 000000084 INF: ===================Camera #2 Frame #232===================
17-02-28 20:16:40.380 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:40.380 -08 000000095 INF: Y Motor: Unshifted Position: 1859972
17-02-28 20:16:40.430 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.443 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:40.503 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:16:40.503 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:16:40.503 -08 000000032 INF: ===================Camera #0 Frame #236===================
17-02-28 20:16:40.548 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:16:40.548 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:16:40.548 -08 000000084 INF: ===================Camera #2 Frame #238===================
17-02-28 20:16:40.556 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.672 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:16:40.672 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:16:40.672 -08 000000032 INF: ===================Camera #0 Frame #243===================
17-02-28 20:16:40.693 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:40.694 -08 000000095 INF: Y Motor: Unshifted Position: 1655868
17-02-28 20:16:40.719 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:16:40.719 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:16:40.719 -08 000000084 INF: ===================Camera #2 Frame #244===================
17-02-28 20:16:40.744 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:40.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:40.755 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:40.756 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:16:40.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 5 of 5 seconds left===================
17-02-28 20:16:40.845 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:16:40.845 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:16:40.845 -08 000000032 INF: ===================Camera #0 Frame #249===================
17-02-28 20:16:40.869 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:40.889 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:16:40.889 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:16:40.889 -08 000000084 INF: ===================Camera #2 Frame #251===================
17-02-28 20:16:41.005 -08 000000095 INF: Y Motor: Unshifted Position: 1454365
17-02-28 20:16:41.015 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:16:41.015 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:16:41.015 -08 000000032 INF: ===================Camera #0 Frame #255===================
17-02-28 20:16:41.055 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.063 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:16:41.063 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:16:41.063 -08 000000084 INF: ===================Camera #2 Frame #257===================
17-02-28 20:16:41.180 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.185 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:16:41.185 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:16:41.185 -08 000000032 INF: ===================Camera #0 Frame #261===================
17-02-28 20:16:41.234 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:16:41.234 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:16:41.234 -08 000000084 INF: ===================Camera #2 Frame #263===================
17-02-28 20:16:41.318 -08 000000095 INF: Y Motor: Unshifted Position: 1250051
17-02-28 20:16:41.355 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:16:41.355 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:16:41.355 -08 000000032 INF: ===================Camera #0 Frame #268===================
17-02-28 20:16:41.368 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.405 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:16:41.405 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:16:41.405 -08 000000084 INF: ===================Camera #2 Frame #270===================
17-02-28 20:16:41.491 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.504 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:41.504 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:41.506 -08 000000066 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:41.507 -08 000000059 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:41.507 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:41.507 -08 000000059 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:41.507 -08 000000059 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:41.507 -08 000000059 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:41.507 -08 000000059 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:41.507 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:41.507 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:41.507 -08 000000089 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:41.508 -08 000000089 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:41.528 -08 000000032 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:41.528 -08 000000032 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:41.528 -08 000000032 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:41.541 -08 000000032 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:41.542 -08 000000032 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:41.629 -08 000000095 INF: Y Motor: Unshifted Position: 1047896
17-02-28 20:16:41.679 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.706 -08 000000032 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:41.706 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:41.706 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:41.706 -08 000000084 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:41.706 -08 000000032 INF: ===================Camera TDI===================
17-02-28 20:16:41.713 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:41.714 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:41.740 -08 000000032 INF: ======================================
17-02-28 20:16:41.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:41.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 4 of 5 seconds left===================
17-02-28 20:16:41.805 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:41.878 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:16:41.878 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:16:41.878 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 370.7726 ms
17-02-28 20:16:41.878 -08 000000059 INF: Excitation Filter 1: Moved 107 steps in 371.0086 ms
17-02-28 20:16:41.878 -08 000000059 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.1033 ms
17-02-28 20:16:41.878 -08 000000059 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1741 ms
17-02-28 20:16:41.878 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.8851 ms
17-02-28 20:16:41.878 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.2957 ms
17-02-28 20:16:41.879 -08 000000059 INF: ======================================
17-02-28 20:16:41.879 -08 000000089 INF: ======================================
17-02-28 20:16:41.880 -08 000000066 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:41.881 -08 000000066 INF: ======================================
17-02-28 20:16:41.912 -08 000000084 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:41.912 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:41.942 -08 000000095 INF: Y Motor: Unshifted Position: 984178
17-02-28 20:16:41.942 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:41.942 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:41.946 -08 000000084 INF: ======================================
17-02-28 20:16:41.948 -08 000000068 INF: ===================Camera TDI===================
17-02-28 20:16:41.949 -08 000000068 INF: ======================================
17-02-28 20:16:42.004 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:42.004 -08 000000095 INF: Y Motor: Moved to 14.8418 after 7940 ms
17-02-28 20:16:42.004 -08 000000095 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:42.065 -08 000000095 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:42.065 -08 000000095 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:42.065 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:42.130 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:42.130 -08 000000095 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:42.130 -08 000000095 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:42.191 -08 000000095 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:42.253 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:42.315 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:42.315 -08 000000095 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:42.315 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:42.379 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:16:42.379 -08 000000095 INF: ======================================
17-02-28 20:16:42.380 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:42.381 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:42.382 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.382 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:42.439 -08 000000032 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:42.439 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:42.502 -08 000000085 INF: FPGA: Recv TDIYERD 1484179
17-02-28 20:16:42.502 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:42.562 -08 000000038 INF: FPGA: Recv ZADCR 36272
17-02-28 20:16:42.562 -08 000000018 INF: At scan end Y pos = 14.842 and Z pos = -0.139. Y moved -48.539 mm
17-02-28 20:16:42.562 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:42.627 -08 000000047 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:42.627 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:42.627 -08 000000018 INF: TDIScan finished after 11975.0824 ms
17-02-28 20:16:42.627 -08 000000018 INF: Image[0]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:42.627 -08 000000018 INF: Image[2]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:42.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.661 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.894 um
17-02-28 20:16:42.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.663 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:42.688 -08 000000028 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:42.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.689 -08 000000082 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:42.689 -08 000000074 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:42.689 -08 000000046 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:42.690 -08 000000095 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:42.690 -08 000000095 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:42.690 -08 000000074 INF: ======================================
17-02-28 20:16:42.690 -08 000000095 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:42.690 -08 000000046 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:42.690 -08 000000046 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:42.690 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:42.690 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:42.691 -08 000000085 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:42.694 -08 000000051 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:42.719 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:42.719 -08 000000051 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:42.720 -08 000000023 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.720 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.720 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.720 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.721 -08 000000023 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.721 -08 000000044 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.721 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.721 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:42.750 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:42.750 -08 000000032 INF: FPGA: Recv ZSEL 
17-02-28 20:16:42.750 -08 000000085 INF: FPGA: Xmit ZDACW 36196\n
17-02-28 20:16:42.750 -08 000000095 INF: ======================================
17-02-28 20:16:42.752 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:16:42.752 -08 000000046 INF: ======================================
17-02-28 20:16:42.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:42.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:16:42.796 -08 000000023 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.796 -08 000000044 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.796 -08 000000098 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.797 -08 000000047 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:42.814 -08 000000090 INF: FPGA: Recv ZDACW 
17-02-28 20:16:42.814 -08 000000085 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:42.814 -08 000000085 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:42.876 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:16:42.876 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:42.877 -08 000000085 INF: ======================================
17-02-28 20:16:42.948 -08 000000023 INF: LFT found best fwhm score 2.000103 in 152 ms
17-02-28 20:16:42.949 -08 000000023 INF: LFT found good score at index 4821 with fwhm value 2.000103. Next cycle, cycle 4 starting Z position for top surface is at -0.138 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000098 INF: LFT found best fwhm score 2.124739 in 153 ms
17-02-28 20:16:42.949 -08 000000098 INF: LFT found good score at index 5473 with fwhm value 2.124739. Next cycle, cycle 4 starting Z position for top surface is at -0.138 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000044 INF: LFT found best fwhm score 2.000106 in 153 ms
17-02-28 20:16:42.949 -08 000000047 INF: LFT found best fwhm score 2.000128 in 152 ms
17-02-28 20:16:42.949 -08 000000044 INF: LFT found good score at index 1117 with fwhm value 2.000106. Next cycle, cycle 4 starting Z position for top surface is at -0.139 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000047 INF: LFT found good score at index 8829 with fwhm value 2.000128. Next cycle, cycle 4 starting Z position for top surface is at -0.139 mm FC:A, C:3,L:8,T
17-02-28 20:16:42.949 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000023 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000044 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:42.949 -08 000000098 INF: ======================================
17-02-28 20:16:42.949 -08 000000044 INF: ======================================
17-02-28 20:16:42.950 -08 000000023 INF: ======================================
17-02-28 20:16:42.950 -08 000000047 INF: ======================================
17-02-28 20:16:42.951 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:42.952 -08 000000051 INF: LFT weighted average best Z for top surface is at -0.139mm FC:A, C:3,L:8,T
17-02-28 20:16:42.952 -08 000000051 INF: ======================================
17-02-28 20:16:42.953 -08 000000082 INF: ======================================
17-02-28 20:16:42.954 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:42.955 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:42.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:42.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:42.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 24.93993 Y = 39.70011===================
17-02-28 20:16:42.957 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:16:42.958 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 3 of 5 seconds left===================
17-02-28 20:16:42.980 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:16:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:42.981 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:42.981 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:42.981 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:42.982 -08 000000018 INF: Transformed XStagePosition from 26.04793 mm to 26.0951947644353 mm.
17-02-28 20:16:42.993 -08 000000018 INF: Transformed StartingYStagePosition from 64.4901163330078 mm to 64.4904613330155 mm.
17-02-28 20:16:42.993 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2901163330078 mm to 64.2904613330155 mm.
17-02-28 20:16:42.993 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3808663330078 mm to 63.3812113330155 mm.
17-02-28 20:16:42.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:42.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:42.997 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -138.1 um, section = H_1
17-02-28 20:16:42.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:42.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:43.002 -08 000000098 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:43.003 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:43.003 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:16:43.004 -08 000000047 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:43.004 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:16:43.004 -08 000000058 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:43.005 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:43.005 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:43.006 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:43.008 -08 000000057 INF: ===================Move X Motor without settling===================
17-02-28 20:16:43.008 -08 000000057 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:43.008 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:16:43.062 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:43.064 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:43.068 -08 000000104 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:43.068 -08 000000082 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:43.068 -08 000000104 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:43.069 -08 000000057 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:43.069 -08 000000105 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:43.069 -08 000000109 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:43.069 -08 000000057 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:43.069 -08 000000082 INF: ======================================
17-02-28 20:16:43.069 -08 000000074 INF: ===================Camera Arm TDI===================
17-02-28 20:16:43.069 -08 000000105 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:43.070 -08 000000109 INF: ======================================
17-02-28 20:16:43.071 -08 000000074 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:43.072 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:43.073 -08 000000074 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:43.073 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.073 -08 000000082 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:43.073 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:43.073 -08 000000092 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:43.074 -08 000000092 INF: Y Motor: Moving to 64.4905 mm @25.000 mm/sec, started at 14.8418 mm
17-02-28 20:16:43.074 -08 000000092 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:43.074 -08 000000092 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:43.074 -08 000000082 INF: ======================================
17-02-28 20:16:43.074 -08 000000032 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:43.075 -08 000000053 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:43.075 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.075 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:43.076 -08 000000032 INF: ======================================
17-02-28 20:16:43.076 -08 000000051 INF: ======================================
17-02-28 20:16:43.077 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:43.077 -08 000000085 INF: ======================================
17-02-28 20:16:43.078 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:43.078 -08 000000104 INF: ======================================
17-02-28 20:16:43.078 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:43.078 -08 000000109 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:43.079 -08 000000045 INF: ======================================
17-02-28 20:16:43.079 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:43.080 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":8,"Tile":1103,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF245","HCSMMF180","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.081 -08 000000086 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:16:43.081 -08 000000053 INF: ======================================
17-02-28 20:16:43.082 -08 000000109 INF: ======================================
17-02-28 20:16:43.082 -08 000000106 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:43.083 -08 000000106 INF: ======================================
17-02-28 20:16:43.085 -08 000000105 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:43.088 -08 000000105 INF: ======================================
17-02-28 20:16:43.092 -08 000000098 INF: ======================================
17-02-28 20:16:43.129 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:16:43.131 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.131 -08 000000092 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:43.131 -08 000000092 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:43.131 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:43.131 -08 000000086 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Moving to 26.0952 mm @15.000 mm/sec, started at 24.9961 mm
17-02-28 20:16:43.132 -08 000000057 INF: X Motor: Xmit MA -13478\n
17-02-28 20:16:43.160 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":8,"Tile":1107,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF256","HCSMMF230","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.189 -08 000000104 INF: FPGA: Recv TDIBB
17-02-28 20:16:43.190 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":8,"Tile":1101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF275","HCSMMF223","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.190 -08 000000057 INF: X Motor: Recv MA -13478\r\n>
17-02-28 20:16:43.190 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:16:43.190 -08 000000057 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:16:43.191 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.191 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:43.192 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":8,"Tile":1108,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF269","HCSMMF287","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.193 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:16:43.194 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.194 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":8,"Tile":1102,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF259","HCSMMF264","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.197 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":8,"Tile":1106,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF177","HCSMMF182","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.202 -08 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:16:43.203 -08 000000086 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:16:43.203 -08 000000086 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:16:43.204 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":8,"Tile":1104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF189","HCSMMF202","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.207 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":8,"Tile":1105,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF268","HCSMMF265","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.216 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":8,"Tile":1109,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF190","HCSMMF183","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.218 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":8,"Tile":1110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF229","HCSMMF284","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.219 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":8,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF220","HCSMMF199","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.220 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":8,"Tile":1114,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF267","HCSMMF188","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.222 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":8,"Tile":1112,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF244","HCSMMF250","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.223 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":8,"Tile":1113,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF260","HCSMMF227","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.225 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":8,"Tile":1111,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF222","HCSMMF206","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.226 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":8,"Tile":1116,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF281","HCSMMF237","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.227 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":8,"Tile":1119,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF232","HCSMMF251","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.232 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":8,"Tile":1122,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF239","HCSMMF253","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.233 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":8,"Tile":1128,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF271","HCSMMF262","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.235 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":8,"Tile":1118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF215","HCSMMF236","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.236 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":8,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF243","HCSMMF192","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.237 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":8,"Tile":1120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF231","HCSMMF247","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.238 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":8,"Tile":1121,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF200","HCSMMF285","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.239 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":8,"Tile":1124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF198","HCSMMF205","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.240 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":8,"Tile":1127,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF263","HCSMMF270","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.241 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":8,"Tile":1126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF258","HCSMMF196","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.243 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":8,"Tile":1125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF194","HCSMMF286","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.244 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":8,"Tile":1123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF191","HCSMMF242","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:43.247 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Set target position to 5949046 encoder counts
17-02-28 20:16:43.251 -08 000000092 INF: Y Motor: Xmit s r0xca 5949046\r
17-02-28 20:16:43.251 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:43.252 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.253 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:43.254 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:16:43.254 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.256 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:16:43.256 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:16:43.256 -08 000000086 INF: Z Motor: Arming to move to -0.0981 mm
17-02-28 20:16:43.256 -08 000000086 INF: FPGA: Xmit ZYT 6429046 4\n
17-02-28 20:16:43.311 -08 000000079 INF: FPGA: Recv ZYT 
17-02-28 20:16:43.311 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1484178 enc / 14.842 mm / ) = 6429046 enc / 64.290 mm
17-02-28 20:16:43.311 -08 000000086 INF: FPGA: Xmit ZARM 25710\n
17-02-28 20:16:43.313 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.313 -08 000000092 INF: Y Motor: Start the move command
17-02-28 20:16:43.313 -08 000000092 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:43.351 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.351 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:43.376 -08 000000023 INF: FPGA: Recv ZARM
17-02-28 20:16:43.376 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9753 ms
17-02-28 20:16:43.376 -08 000000086 INF: Z Motor: ArmAbsStepped took 120.1271 ms
17-02-28 20:16:43.376 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:16:43.378 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:43.378 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.378 -08 000000092 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:16:43.378 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.379 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:16:43.380 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.381 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:16:43.381 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:16:43.383 -08 000000086 INF: ======================================
17-02-28 20:16:43.406 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.412 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:43.501 -08 000000092 INF: Y Motor: Unshifted Position: 1068251
17-02-28 20:16:43.508 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.514 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:43.551 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.624 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.630 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:43.665 -08 000000074 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:43.665 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:43.665 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:43.679 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.680 -08 000000074 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:43.682 -08 000000074 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:16:43.729 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:43.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:43.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 2 of 5 seconds left===================
17-02-28 20:16:43.813 -08 000000092 INF: Y Motor: Unshifted Position: 1778348
17-02-28 20:16:43.813 -08 000000057 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:43.863 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:43.877 -08 000000057 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:43.877 -08 000000057 INF: X Motor: Moved to 26.0947 after 686 ms
17-02-28 20:16:43.877 -08 000000057 INF: ======================================
17-02-28 20:16:43.991 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.009 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:44.124 -08 000000092 INF: Y Motor: Unshifted Position: 2554197
17-02-28 20:16:44.174 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.281 -08 000000074 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:16:44.281 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:16:44.281 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:16:44.297 -08 000000074 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:16:44.299 -08 000000074 INF: ===================Camera Arm TDI===================
17-02-28 20:16:44.300 -08 000000074 INF: ======================================
17-02-28 20:16:44.302 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:16:44.303 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.303 -08 000000058 INF: ======================================
17-02-28 20:16:44.438 -08 000000092 INF: Y Motor: Unshifted Position: 3339138
17-02-28 20:16:44.488 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.611 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.751 -08 000000092 INF: Y Motor: Unshifted Position: 4117549
17-02-28 20:16:44.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:44.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Delay 1 of 5 seconds left===================
17-02-28 20:16:44.801 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:44.923 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.061 -08 000000092 INF: Y Motor: Unshifted Position: 4897484
17-02-28 20:16:45.111 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.237 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.372 -08 000000092 INF: Y Motor: Unshifted Position: 5674397
17-02-28 20:16:45.422 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.549 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:45.686 -08 000000092 INF: Y Motor: Unshifted Position: 5949048
17-02-28 20:16:45.686 -08 000000092 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:45.686 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:45.747 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:45.747 -08 000000092 INF: Y Motor: Moved to 64.4905 after 2369 ms
17-02-28 20:16:45.747 -08 000000092 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:45.756 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:16:45.756 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:45.809 -08 000000092 INF: Y Motor: Recv v 4096\r
17-02-28 20:16:45.809 -08 000000092 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:45.809 -08 000000092 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:45.855 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:16:45.874 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:45.874 -08 000000092 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:45.874 -08 000000092 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:45.934 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:16:45.934 -08 000000042 INF: Current Position of Pump is: 11520
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: Recv v 402653184\r
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:45.935 -08 000000092 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: Recv v 0\r
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:45.997 -08 000000092 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:46.034 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:16:46.061 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.061 -08 000000092 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:46.061 -08 000000092 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:46.122 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:16:46.122 -08 000000042 INF: Current Position of Pump is: 11520
17-02-28 20:16:46.122 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8), Dispensing port PortC===================
17-02-28 20:16:46.123 -08 000000092 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.123 -08 000000092 INF: ======================================
17-02-28 20:16:46.124 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:16:46.125 -08 000000047 INF: ======================================
17-02-28 20:16:46.126 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:46.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:46.127 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:16:46.127 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:16:46.185 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.185 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:16:46.222 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD11520R\r
17-02-28 20:16:46.245 -08 000000045 INF: FPGA: Recv ZFREQCL
17-02-28 20:16:46.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:16:46.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:46.246 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:46.307 -08 000000057 INF: FPGA: Recv TDIYERD 6449048
17-02-28 20:16:46.307 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449048 counts (64.490 mm)
17-02-28 20:16:46.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:46.308 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:46.308 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:46.309 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:46.309 -08 000000106 INF: ===================Set YMotor gains for scans===================
17-02-28 20:16:46.309 -08 000000106 INF: ======================================
17-02-28 20:16:46.310 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:46.310 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:16:46.310 -08 000000068 INF: FPGA: Xmit TDIYPOS 6338121\n
17-02-28 20:16:46.372 -08 000000090 INF: FPGA: Recv TDIYPOS
17-02-28 20:16:46.372 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:46.374 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:16:46.374 -08 000000068 INF: FPGA: Xmit TDIYARM3 139264 6429046 1 1\n
17-02-28 20:16:46.408 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:46.433 -08 000000058 INF: FPGA: Recv TDIYARM3
17-02-28 20:16:46.433 -08 000000068 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:16:46.434 -08 000000068 INF: ===================TDI FPGA Arm===================
17-02-28 20:16:46.435 -08 000000068 INF: ======================================
17-02-28 20:16:46.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:16:46.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:46.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.440 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:16:46.440 -08 000000045 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:16:46.440 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:16:46.440 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:16:46.440 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:16:46.440 -08 000000045 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:16:46.440 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:16:46.440 -08 000000045 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:16:46.440 -08 000000045 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:16:46.441 -08 000000045 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:16:46.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:46.746 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:46.808 -08 000000028 INF: FPGA: Recv EX2MV
17-02-28 20:16:46.808 -08 000000028 INF: FPGA: Recv EX1MV
17-02-28 20:16:46.808 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 368.1342 ms
17-02-28 20:16:46.808 -08 000000045 INF: Excitation Filter 1: Moved -107 steps in 368.032 ms
17-02-28 20:16:46.808 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.2928 ms
17-02-28 20:16:46.808 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4342 ms
17-02-28 20:16:46.808 -08 000000045 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2567 ms
17-02-28 20:16:46.808 -08 000000045 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.435 ms
17-02-28 20:16:46.809 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:46.809 -08 000000038 INF: ======================================
17-02-28 20:16:46.809 -08 000000045 INF: ======================================
17-02-28 20:16:46.810 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.811 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:46.812 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:16:46.812 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:46.812 -08 000000023 INF: ===================FPGA Z Wait===================
17-02-28 20:16:46.812 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:46.812 -08 000000023 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:16:46.812 -08 000000074 INF: ===================Camera TDI, Parallel===================
17-02-28 20:16:46.813 -08 000000064 INF: Y Motor: Moving to 14.8421 mm @6.500 mm/sec, started at 64.4905 mm
17-02-28 20:16:46.813 -08 000000057 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:16:46.813 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:46.813 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:46.814 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:16:46.814 -08 000000057 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:16:46.814 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:46.816 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.816 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.816 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.816 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.873 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.873 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:46.873 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:46.935 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:46.935 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:46.966 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.966 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.966 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:46.966 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Set target position to 984212 encoder counts
17-02-28 20:16:46.996 -08 000000064 INF: Y Motor: Xmit s r0xca 984212\r
17-02-28 20:16:47.060 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:47.060 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:16:47.060 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:47.061 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:47.116 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:47.116 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:16:47.116 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:47.116 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:16:47.122 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:47.123 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:47.123 -08 000000064 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:16:47.123 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.198 -08 000000055 INF: FPGA: Recv ZWAIT 
17-02-28 20:16:47.199 -08 000000023 INF: ======================================
17-02-28 20:16:47.261 -08 000000064 INF: Y Motor: Unshifted Position: 5876138
17-02-28 20:16:47.266 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:47.266 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:47.266 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:16:47.266 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:16:47.266 -08 000000095 INF: ===================Camera #0 Frame #5===================
17-02-28 20:16:47.266 -08 000000084 INF: ===================Camera #2 Frame #5===================
17-02-28 20:16:47.311 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.372 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:47.432 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:47.432 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:47.432 -08 000000095 INF: ===================Camera #0 Frame #11===================
17-02-28 20:16:47.436 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.438 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:16:47.438 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:16:47.438 -08 000000084 INF: ===================Camera #2 Frame #11===================
17-02-28 20:16:47.447 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:47.573 -08 000000064 INF: Y Motor: Unshifted Position: 5673989
17-02-28 20:16:47.610 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:16:47.610 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:16:47.610 -08 000000095 INF: ===================Camera #0 Frame #17===================
17-02-28 20:16:47.623 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.624 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:16:47.624 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:16:47.624 -08 000000084 INF: ===================Camera #2 Frame #18===================
17-02-28 20:16:47.697 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:47.748 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.759 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:47.786 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:16:47.786 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:16:47.786 -08 000000095 INF: ===================Camera #0 Frame #24===================
17-02-28 20:16:47.806 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:16:47.806 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:16:47.806 -08 000000084 INF: ===================Camera #2 Frame #24===================
17-02-28 20:16:47.887 -08 000000064 INF: Y Motor: Unshifted Position: 5470974
17-02-28 20:16:47.937 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:47.967 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:16:47.967 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:16:47.967 -08 000000095 INF: ===================Camera #0 Frame #30===================
17-02-28 20:16:47.984 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:16:47.984 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:16:47.984 -08 000000084 INF: ===================Camera #2 Frame #31===================
17-02-28 20:16:48.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:48.059 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.073 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:48.073 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (8)===================
17-02-28 20:16:48.073 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:16:48.141 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:16:48.141 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:16:48.141 -08 000000095 INF: ===================Camera #0 Frame #37===================
17-02-28 20:16:48.164 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38.
17-02-28 20:16:48.164 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:16:48.164 -08 000000084 INF: ===================Camera #2 Frame #38===================
17-02-28 20:16:48.199 -08 000000064 INF: Y Motor: Unshifted Position: 5268827
17-02-28 20:16:48.249 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.313 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:16:48.313 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:16:48.313 -08 000000095 INF: ===================Camera #0 Frame #43===================
17-02-28 20:16:48.337 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:16:48.337 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:16:48.337 -08 000000084 INF: ===================Camera #2 Frame #44===================
17-02-28 20:16:48.371 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.482 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:16:48.482 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:16:48.482 -08 000000095 INF: ===================Camera #0 Frame #49===================
17-02-28 20:16:48.506 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:16:48.506 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:16:48.506 -08 000000084 INF: ===================Camera #2 Frame #50===================
17-02-28 20:16:48.511 -08 000000064 INF: Y Motor: Unshifted Position: 5065817
17-02-28 20:16:48.561 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.656 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:16:48.656 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:16:48.656 -08 000000095 INF: ===================Camera #0 Frame #56===================
17-02-28 20:16:48.676 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:16:48.676 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:16:48.676 -08 000000084 INF: ===================Camera #2 Frame #56===================
17-02-28 20:16:48.684 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.823 -08 000000064 INF: Y Motor: Unshifted Position: 4862799
17-02-28 20:16:48.831 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:16:48.831 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:16:48.831 -08 000000095 INF: ===================Camera #0 Frame #62===================
17-02-28 20:16:48.849 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:16:48.849 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:16:48.849 -08 000000084 INF: ===================Camera #2 Frame #63===================
17-02-28 20:16:48.873 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.997 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:48.999 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:16:48.999 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:16:48.999 -08 000000095 INF: ===================Camera #0 Frame #68===================
17-02-28 20:16:49.033 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:16:49.033 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:16:49.033 -08 000000084 INF: ===================Camera #2 Frame #70===================
17-02-28 20:16:49.134 -08 000000064 INF: Y Motor: Unshifted Position: 4658699
17-02-28 20:16:49.173 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:16:49.175 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:16:49.175 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:16:49.175 -08 000000095 INF: ===================Camera #0 Frame #75===================
17-02-28 20:16:49.184 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.216 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:16:49.216 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:16:49.216 -08 000000084 INF: ===================Camera #2 Frame #76===================
17-02-28 20:16:49.258 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:49.310 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.357 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:16:49.357 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:16:49.357 -08 000000095 INF: ===================Camera #0 Frame #82===================
17-02-28 20:16:49.358 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:49.384 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:16:49.387 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:16:49.387 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:16:49.387 -08 000000084 INF: ===================Camera #2 Frame #83===================
17-02-28 20:16:49.446 -08 000000064 INF: Y Motor: Unshifted Position: 4455885
17-02-28 20:16:49.496 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.529 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:16:49.529 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:16:49.529 -08 000000095 INF: ===================Camera #0 Frame #88===================
17-02-28 20:16:49.560 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:16:49.560 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:16:49.560 -08 000000084 INF: ===================Camera #2 Frame #89===================
17-02-28 20:16:49.621 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.634 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:16:49.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:16:49.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:49.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:16:49.698 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:16:49.698 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:16:49.698 -08 000000095 INF: ===================Camera #0 Frame #94===================
17-02-28 20:16:49.729 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:16:49.729 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:16:49.729 -08 000000084 INF: ===================Camera #2 Frame #95===================
17-02-28 20:16:49.758 -08 000000064 INF: Y Motor: Unshifted Position: 4252876
17-02-28 20:16:49.808 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:49.866 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:16:49.866 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:16:49.866 -08 000000095 INF: ===================Camera #0 Frame #100===================
17-02-28 20:16:49.898 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:16:49.898 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:16:49.898 -08 000000084 INF: ===================Camera #2 Frame #101===================
17-02-28 20:16:49.933 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.034 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:16:50.034 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:16:50.034 -08 000000095 INF: ===================Camera #0 Frame #106===================
17-02-28 20:16:50.067 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:16:50.067 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:16:50.067 -08 000000084 INF: ===================Camera #2 Frame #108===================
17-02-28 20:16:50.071 -08 000000064 INF: Y Motor: Unshifted Position: 4051142
17-02-28 20:16:50.121 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.202 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:16:50.202 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:16:50.202 -08 000000095 INF: ===================Camera #0 Frame #113===================
17-02-28 20:16:50.239 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:16:50.239 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:16:50.239 -08 000000084 INF: ===================Camera #2 Frame #114===================
17-02-28 20:16:50.243 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:50.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:50.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:16:50.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Chemistry CompleteCycle===================
17-02-28 20:16:50.253 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3===================
17-02-28 20:16:50.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:16:50.267 -08 000000042 INF: Call to RTA to retrieve registration transforms took 13 ms.
17-02-28 20:16:50.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:16:50.374 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:16:50.374 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:16:50.374 -08 000000095 INF: ===================Camera #0 Frame #119===================
17-02-28 20:16:50.383 -08 000000064 INF: Y Motor: Unshifted Position: 3848348
17-02-28 20:16:50.408 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:16:50.408 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:16:50.408 -08 000000084 INF: ===================Camera #2 Frame #120===================
17-02-28 20:16:50.433 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.542 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:16:50.542 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:16:50.542 -08 000000095 INF: ===================Camera #0 Frame #125===================
17-02-28 20:16:50.556 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.577 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:16:50.577 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:16:50.577 -08 000000084 INF: ===================Camera #2 Frame #126===================
17-02-28 20:16:50.695 -08 000000064 INF: Y Motor: Unshifted Position: 3644244
17-02-28 20:16:50.710 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:16:50.710 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:16:50.710 -08 000000095 INF: ===================Camera #0 Frame #131===================
17-02-28 20:16:50.745 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.746 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:16:50.746 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:16:50.746 -08 000000084 INF: ===================Camera #2 Frame #133===================
17-02-28 20:16:50.867 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:50.879 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:16:50.879 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:16:50.879 -08 000000095 INF: ===================Camera #0 Frame #138===================
17-02-28 20:16:50.919 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:16:50.919 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:16:50.919 -08 000000084 INF: ===================Camera #2 Frame #139===================
17-02-28 20:16:51.008 -08 000000064 INF: Y Motor: Unshifted Position: 3441229
17-02-28 20:16:51.050 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:16:51.050 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:16:51.050 -08 000000095 INF: ===================Camera #0 Frame #144===================
17-02-28 20:16:51.058 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.088 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:16:51.088 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:16:51.088 -08 000000084 INF: ===================Camera #2 Frame #145===================
17-02-28 20:16:51.181 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.218 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:16:51.218 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:16:51.218 -08 000000095 INF: ===================Camera #0 Frame #150===================
17-02-28 20:16:51.257 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:16:51.257 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:16:51.257 -08 000000084 INF: ===================Camera #2 Frame #152===================
17-02-28 20:16:51.318 -08 000000064 INF: Y Motor: Unshifted Position: 3240380
17-02-28 20:16:51.368 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.387 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:16:51.387 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:16:51.387 -08 000000095 INF: ===================Camera #0 Frame #156===================
17-02-28 20:16:51.429 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:16:51.429 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:16:51.429 -08 000000084 INF: ===================Camera #2 Frame #158===================
17-02-28 20:16:51.493 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.555 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:16:51.555 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:16:51.555 -08 000000095 INF: ===================Camera #0 Frame #162===================
17-02-28 20:16:51.598 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:16:51.598 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:16:51.598 -08 000000084 INF: ===================Camera #2 Frame #164===================
17-02-28 20:16:51.630 -08 000000064 INF: Y Motor: Unshifted Position: 3037371
17-02-28 20:16:51.680 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.723 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:16:51.723 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:16:51.723 -08 000000095 INF: ===================Camera #0 Frame #169===================
17-02-28 20:16:51.767 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:16:51.767 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:16:51.767 -08 000000084 INF: ===================Camera #2 Frame #170===================
17-02-28 20:16:51.805 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:51.894 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:16:51.894 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:16:51.894 -08 000000095 INF: ===================Camera #0 Frame #175===================
17-02-28 20:16:51.936 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:16:51.936 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:16:51.936 -08 000000084 INF: ===================Camera #2 Frame #177===================
17-02-28 20:16:51.940 -08 000000064 INF: Y Motor: Unshifted Position: 2834359
17-02-28 20:16:51.990 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.062 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:16:52.062 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:16:52.062 -08 000000095 INF: ===================Camera #0 Frame #181===================
17-02-28 20:16:52.108 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:16:52.108 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:16:52.108 -08 000000084 INF: ===================Camera #2 Frame #183===================
17-02-28 20:16:52.115 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.230 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:16:52.230 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:16:52.230 -08 000000095 INF: ===================Camera #0 Frame #187===================
17-02-28 20:16:52.252 -08 000000064 INF: Y Motor: Unshifted Position: 2630915
17-02-28 20:16:52.277 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:16:52.277 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:16:52.277 -08 000000084 INF: ===================Camera #2 Frame #189===================
17-02-28 20:16:52.302 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.398 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:16:52.398 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:16:52.398 -08 000000095 INF: ===================Camera #0 Frame #194===================
17-02-28 20:16:52.427 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.446 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:16:52.446 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:16:52.446 -08 000000084 INF: ===================Camera #2 Frame #195===================
17-02-28 20:16:52.566 -08 000000064 INF: Y Motor: Unshifted Position: 2428112
17-02-28 20:16:52.569 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:16:52.569 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:16:52.569 -08 000000095 INF: ===================Camera #0 Frame #200===================
17-02-28 20:16:52.615 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:16:52.615 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:16:52.615 -08 000000084 INF: ===================Camera #2 Frame #202===================
17-02-28 20:16:52.616 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.737 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:16:52.737 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:16:52.737 -08 000000095 INF: ===================Camera #0 Frame #206===================
17-02-28 20:16:52.739 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.787 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:16:52.787 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:16:52.787 -08 000000084 INF: ===================Camera #2 Frame #208===================
17-02-28 20:16:52.876 -08 000000064 INF: Y Motor: Unshifted Position: 2225098
17-02-28 20:16:52.905 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:16:52.905 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:16:52.905 -08 000000095 INF: ===================Camera #0 Frame #212===================
17-02-28 20:16:52.926 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:52.956 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:16:52.956 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:16:52.956 -08 000000084 INF: ===================Camera #2 Frame #214===================
17-02-28 20:16:53.053 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.073 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:16:53.073 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:16:53.073 -08 000000095 INF: ===================Camera #0 Frame #218===================
17-02-28 20:16:53.125 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:16:53.125 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:16:53.125 -08 000000084 INF: ===================Camera #2 Frame #220===================
17-02-28 20:16:53.190 -08 000000064 INF: Y Motor: Unshifted Position: 2022949
17-02-28 20:16:53.240 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.241 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:16:53.241 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:16:53.241 -08 000000095 INF: ===================Camera #0 Frame #225===================
17-02-28 20:16:53.294 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:16:53.294 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:16:53.294 -08 000000084 INF: ===================Camera #2 Frame #226===================
17-02-28 20:16:53.365 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.412 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:16:53.412 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:16:53.412 -08 000000095 INF: ===================Camera #0 Frame #231===================
17-02-28 20:16:53.463 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:16:53.463 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:16:53.463 -08 000000084 INF: ===================Camera #2 Frame #233===================
17-02-28 20:16:53.502 -08 000000064 INF: Y Motor: Unshifted Position: 1819924
17-02-28 20:16:53.552 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.580 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:16:53.580 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:16:53.580 -08 000000095 INF: ===================Camera #0 Frame #237===================
17-02-28 20:16:53.635 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:16:53.635 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:16:53.635 -08 000000084 INF: ===================Camera #2 Frame #239===================
17-02-28 20:16:53.677 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.748 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:16:53.748 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:16:53.748 -08 000000095 INF: ===================Camera #0 Frame #243===================
17-02-28 20:16:53.804 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:16:53.804 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:16:53.804 -08 000000084 INF: ===================Camera #2 Frame #245===================
17-02-28 20:16:53.814 -08 000000064 INF: Y Motor: Unshifted Position: 1616914
17-02-28 20:16:53.864 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:53.916 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:16:53.916 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:16:53.916 -08 000000095 INF: ===================Camera #0 Frame #249===================
17-02-28 20:16:53.974 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:16:53.974 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:16:53.974 -08 000000084 INF: ===================Camera #2 Frame #252===================
17-02-28 20:16:53.989 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.087 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:16:54.087 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:16:54.087 -08 000000095 INF: ===================Camera #0 Frame #256===================
17-02-28 20:16:54.124 -08 000000064 INF: Y Motor: Unshifted Position: 1412804
17-02-28 20:16:54.146 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:16:54.146 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:16:54.146 -08 000000084 INF: ===================Camera #2 Frame #258===================
17-02-28 20:16:54.174 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.261 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:16:54.261 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:16:54.261 -08 000000095 INF: ===================Camera #0 Frame #262===================
17-02-28 20:16:54.299 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.315 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:16:54.315 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:16:54.315 -08 000000084 INF: ===================Camera #2 Frame #264===================
17-02-28 20:16:54.431 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:16:54.431 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:16:54.431 -08 000000095 INF: ===================Camera #0 Frame #268===================
17-02-28 20:16:54.436 -08 000000064 INF: Y Motor: Unshifted Position: 1210437
17-02-28 20:16:54.484 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:16:54.484 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:16:54.484 -08 000000084 INF: ===================Camera #2 Frame #270===================
17-02-28 20:16:54.486 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.559 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:16:54.559 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:54.561 -08 000000057 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:16:54.561 -08 000000068 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:16:54.562 -08 000000025 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:16:54.562 -08 000000068 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:16:54.562 -08 000000068 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:16:54.562 -08 000000068 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:16:54.562 -08 000000068 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:16:54.562 -08 000000025 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:16:54.562 -08 000000025 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:16:54.562 -08 000000025 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:16:54.563 -08 000000025 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:16:54.601 -08 000000095 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:54.601 -08 000000095 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:54.601 -08 000000095 INF: ===================Camera #0 Frame #272===================
17-02-28 20:16:54.611 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.615 -08 000000095 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:54.616 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:54.748 -08 000000064 INF: Y Motor: Unshifted Position: 1007634
17-02-28 20:16:54.749 -08 000000095 INF: Camera #0 ReleaseBuffer
17-02-28 20:16:54.749 -08 000000084 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:16:54.749 -08 000000084 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:16:54.749 -08 000000084 INF: ===================Camera #2 Frame #272===================
17-02-28 20:16:54.749 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:16:54.755 -08 000000084 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:16:54.756 -08 000000084 INF: ===================CameraTDI Cleanup===================
17-02-28 20:16:54.778 -08 000000095 INF: ======================================
17-02-28 20:16:54.798 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:54.923 -08 000000084 INF: Camera #2 ReleaseBuffer
17-02-28 20:16:54.923 -08 000000084 INF: ===================Camera TDI===================
17-02-28 20:16:54.933 -08 000000092 INF: FPGA: Recv EX1MV
17-02-28 20:16:54.933 -08 000000092 INF: FPGA: Recv EX2MV
17-02-28 20:16:54.933 -08 000000025 INF: Excitation Filter 2: Moved 107 steps in 370.9695 ms
17-02-28 20:16:54.933 -08 000000025 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.068 ms
17-02-28 20:16:54.933 -08 000000068 INF: Excitation Filter 1: Moved 107 steps in 371.1737 ms
17-02-28 20:16:54.933 -08 000000068 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.3101 ms
17-02-28 20:16:54.933 -08 000000068 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.3797 ms
17-02-28 20:16:54.933 -08 000000025 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.1471 ms
17-02-28 20:16:54.933 -08 000000068 INF: ======================================
17-02-28 20:16:54.934 -08 000000025 INF: ======================================
17-02-28 20:16:54.935 -08 000000064 INF: Y Motor: Unshifted Position: 984211
17-02-28 20:16:54.935 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:16:54.935 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:16:54.935 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:54.936 -08 000000057 INF: ======================================
17-02-28 20:16:54.958 -08 000000084 INF: ======================================
17-02-28 20:16:54.960 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:16:54.961 -08 000000074 INF: ======================================
17-02-28 20:16:54.999 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:54.999 -08 000000064 INF: Y Motor: Moved to 14.8421 after 7876 ms
17-02-28 20:16:54.999 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:16:55.060 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:16:55.060 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:16:55.060 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:55.124 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:55.124 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:55.124 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:16:55.185 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:16:55.247 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:55.311 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:55.311 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:16:55.311 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:55.375 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:16:55.375 -08 000000064 INF: ======================================
17-02-28 20:16:55.376 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:55.377 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, Scanning===================
17-02-28 20:16:55.378 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.378 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:16:55.434 -08 000000045 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:16:55.434 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:16:55.498 -08 000000087 INF: FPGA: Recv TDIYERD 1484213
17-02-28 20:16:55.498 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:16:55.557 -08 000000050 INF: FPGA: Recv ZADCR 35935
17-02-28 20:16:55.557 -08 000000018 INF: At scan end Y pos = 14.842 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:16:55.557 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:16:55.621 -08 000000099 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:16:55.621 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:16:55.621 -08 000000018 INF: TDIScan finished after 12638.8897 ms
17-02-28 20:16:55.621 -08 000000018 INF: Image[0]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:55.621 -08 000000018 INF: Image[2]: Y should trigger at 63.381 mm, 2nd row was at 64.290 mm (error = 0.909 mm)
17-02-28 20:16:55.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.655 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.897 um
17-02-28 20:16:55.655 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.656 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:16:55.682 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:16:55.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.683 -08 000000029 INF: ===================Dither Clean Up Command===================
17-02-28 20:16:55.683 -08 000000045 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:16:55.683 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:16:55.683 -08 000000058 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:16:55.684 -08 000000058 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:16:55.684 -08 000000045 INF: ======================================
17-02-28 20:16:55.684 -08 000000058 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:16:55.684 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:55.684 -08 000000089 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:55.684 -08 000000090 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:55.684 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:55.685 -08 000000089 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:16:55.687 -08 000000090 INF: ===================LFT:Extracting coords===================
17-02-28 20:16:55.713 -08 000000090 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:55.713 -08 000000090 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:16:55.714 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.714 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.714 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.714 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.715 -08 000000095 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.715 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.715 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.715 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:16:55.746 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:55.746 -08 000000052 INF: FPGA: Recv ZSEL 
17-02-28 20:16:55.746 -08 000000089 INF: FPGA: Xmit ZDACW 36196\n
17-02-28 20:16:55.746 -08 000000058 INF: ======================================
17-02-28 20:16:55.748 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:16:55.748 -08 000000105 INF: ======================================
17-02-28 20:16:55.789 -08 000000095 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.789 -08 000000047 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.789 -08 000000108 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.790 -08 000000039 INF: FC:A, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:16:55.807 -08 000000064 INF: FPGA: Recv ZDACW 
17-02-28 20:16:55.808 -08 000000089 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:16:55.808 -08 000000089 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:16:55.869 -08 000000066 INF: FPGA: Recv TDIBB
17-02-28 20:16:55.869 -08 000000089 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:16:55.870 -08 000000089 INF: ======================================
17-02-28 20:16:55.940 -08 000000047 INF: LFT found best fwhm score 2.113898 in 151 ms
17-02-28 20:16:55.940 -08 000000095 INF: LFT found best fwhm score 2.000036 in 151 ms
17-02-28 20:16:55.940 -08 000000047 INF: LFT found good score at index 7529 with fwhm value 2.113898. Next cycle, cycle 4 starting Z position for top surface is at -0.136 mm FC:A, C:3,L:8,T
17-02-28 20:16:55.940 -08 000000095 INF: LFT found good score at index 8257 with fwhm value 2.000036. Next cycle, cycle 4 starting Z position for top surface is at -0.137 mm FC:A, C:3,L:8,T
17-02-28 20:16:55.940 -08 000000108 INF: LFT found best fwhm score 2.000568 in 151 ms
17-02-28 20:16:55.940 -08 000000108 INF: LFT found good score at index 4545 with fwhm value 2.000568. Next cycle, cycle 4 starting Z position for top surface is at -0.137 mm FC:A, C:3,L:8,T
17-02-28 20:16:55.941 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.941 -08 000000095 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.941 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.941 -08 000000047 INF: ======================================
17-02-28 20:16:55.941 -08 000000095 INF: ======================================
17-02-28 20:16:55.941 -08 000000039 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:16:55.941 -08 000000039 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.138594280185607 in the next cycle, cycle 4 FC:A, C:3,L:8,T
17-02-28 20:16:55.941 -08 000000108 INF: ======================================
17-02-28 20:16:55.941 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:16:55.942 -08 000000039 INF: ======================================
17-02-28 20:16:55.942 -08 000000090 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:16:55.943 -08 000000090 INF: LFT weighted average best Z for top surface is at -0.137mm FC:A, C:3,L:8,T
17-02-28 20:16:55.943 -08 000000090 INF: ======================================
17-02-28 20:16:55.944 -08 000000029 INF: ======================================
17-02-28 20:16:55.945 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:16:55.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:16:55.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Channels A, G, T, C===================
17-02-28 20:16:55.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:55.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011, Waiting for image analysis===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 26.04793 Y = 39.70011===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:16:55.949 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:16:55.972 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:16:55.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:55.972 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:55.972 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:55.973 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:16:55.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:16:55.973 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:16:55.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:16:55.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:16:55.974 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:16:55.974 -08 000000018 INF: Compensator: Moving OutOfPath
17-02-28 20:16:55.974 -08 000000018 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:16:56.051 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":8,"Tile":1201,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF213","HCSMMF191","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.153 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":8,"Tile":1207,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF178","HCSMMF208","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.168 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":8,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF187","HCSMMF186","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.169 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":8,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF263","HCSMMF243","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.170 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":8,"Tile":1208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF231","HCSMMF224","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.171 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":8,"Tile":1204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF276","HCSMMF214","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.174 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":8,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF286","HCSMMF252","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.175 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":8,"Tile":1202,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF221","HCSMMF196","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.177 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":8,"Tile":1215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF265","HCSMMF226","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.178 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":8,"Tile":1216,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF282","HCSMMF217","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.178 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":8,"Tile":1206,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF285","HCSMMF249","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.179 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":8,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF246","HCSMMF253","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.180 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":8,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF254","HCSMMF250","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.180 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":8,"Tile":1209,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF188","HCSMMF207","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.182 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":8,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF264","HCSMMF257","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.183 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":8,"Tile":1210,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF209","HCSMMF266","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.183 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":8,"Tile":1223,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF278","HCSMMF237","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.184 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":8,"Tile":1222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF227","HCSMMF255","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.185 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":8,"Tile":1228,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF220","HCSMMF236","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.186 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":8,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF269","HCSMMF202","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.187 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":8,"Tile":1213,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF198","HCSMMF184","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.188 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":8,"Tile":1221,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF212","HCSMMF193","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.189 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":8,"Tile":1226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF215","HCSMMF232","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.189 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":8,"Tile":1220,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF206","HCSMMF210","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.190 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":8,"Tile":1225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF182","HCSMMF277","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.191 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":8,"Tile":1219,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF204","HCSMMF259","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.192 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":8,"Tile":1224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF272","HCSMMF195","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.193 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":8,"Tile":1227,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF199","HCSMMF185","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:16:56.212 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.218 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:16:56.318 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.318 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:16:56.357 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.363 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:16:56.372 -08 000000090 INF: FPGA: Recv MIOCOMPR
17-02-28 20:16:56.372 -08 000000018 INF: Compensator: Moved OutOfPath in 397 ms
17-02-28 20:16:56.372 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:16:56.388 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.389 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.389 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:16:56.389 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:16:56.435 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:16:56.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.435 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:16:56.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:56.437 -08 000000053 INF: ===================Move Tilt Motor 1===================
17-02-28 20:16:56.437 -08 000000075 INF: ===================Move Tilt Motor 3===================
17-02-28 20:16:56.437 -08 000000053 INF: Tilt Motor 1: Moving to 5.1808 mm, started at 4.9715 mm, delta = 0.2093 mm
17-02-28 20:16:56.437 -08 000000101 INF: ===================Move Tilt Motor 2===================
17-02-28 20:16:56.438 -08 000000075 INF: Tilt Motor 3: Moving to 5.2697 mm, started at 5.3912 mm, delta = -0.1214 mm
17-02-28 20:16:56.438 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.438 -08 000000101 INF: Tilt Motor 2: Moving to 5.2438 mm, started at 5.3650 mm, delta = -0.1212 mm
17-02-28 20:16:56.439 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.440 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.512 -08 000000051 INF: FPGA: Recv T1RD 19572
17-02-28 20:16:56.512 -08 000000051 INF: FPGA: Recv T2RD 21121
17-02-28 20:16:56.512 -08 000000051 INF: FPGA: Recv T3RD 21225
17-02-28 20:16:56.512 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3537 + 3/6
17-02-28 20:16:56.512 -08 000000075 INF: Tilt Motor 3: Moving to 20747 encoder counts
17-02-28 20:16:56.512 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3520 + 1/6
17-02-28 20:16:56.512 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3262 + 0/6
17-02-28 20:16:56.512 -08 000000053 INF: Tilt Motor 1: Moving to 20397 encoder counts
17-02-28 20:16:56.512 -08 000000101 INF: Tilt Motor 2: Moving to 20645 encoder counts
17-02-28 20:16:56.512 -08 000000075 INF: FPGA: Xmit T3MOVETO 20747\n
17-02-28 20:16:56.513 -08 000000053 INF: FPGA: Xmit T1MOVETO 20397\n
17-02-28 20:16:56.514 -08 000000064 INF: RunCopyService queue size at 2/28/2017 8:16:56 PM is 10
17-02-28 20:16:56.515 -08 000000101 INF: FPGA: Xmit T2MOVETO 20645\n
17-02-28 20:16:56.554 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.560 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:16:56.646 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.652 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:16:56.743 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:16:56.762 -08 000000092 INF: FPGA: Recv T3MOVETO 79
17-02-28 20:16:56.762 -08 000000092 INF: FPGA: Recv T2MOVETO 79
17-02-28 20:16:56.762 -08 000000075 INF: Tilt Motor 3: To move from 5.391 to 5.270 (-0.121 mm) should take 80 steps, but required 79 steps (0.120 mm). Slippage = -0.002 mm (0.01%)
17-02-28 20:16:56.762 -08 000000101 INF: Tilt Motor 2: To move from 5.365 to 5.244 (-0.121 mm) should take 79 steps, but required 79 steps (0.120 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:16:56.762 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.763 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.824 -08 000000105 INF: FPGA: Recv T3RD 20752
17-02-28 20:16:56.824 -08 000000105 INF: FPGA: Recv T2RD 20647
17-02-28 20:16:56.824 -08 000000105 INF: FPGA: Recv T1MOVETO 137
17-02-28 20:16:56.824 -08 000000053 INF: Tilt Motor 1: To move from 4.971 to 5.181 (0.209 mm) should take 138 steps, but required 137 steps (0.209 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:16:56.824 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.825 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:16:56.825 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.825 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:16:56.826 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.886 -08 000000030 INF: FPGA: Recv T1RD 20392
17-02-28 20:16:56.886 -08 000000030 INF: FPGA: Recv T2RD 20647
17-02-28 20:16:56.886 -08 000000030 INF: FPGA: Recv T3RD 20752
17-02-28 20:16:56.886 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:16:56.886 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:16:56.886 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:16:56.886 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:16:56.887 -08 000000101 INF: FPGA: Xmit T2RD\n
17-02-28 20:16:56.889 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.948 -08 000000089 INF: FPGA: Recv T3RD 20752
17-02-28 20:16:56.948 -08 000000089 INF: FPGA: Recv T2RD 20647
17-02-28 20:16:56.948 -08 000000089 INF: FPGA: Recv T1RD 20392
17-02-28 20:16:56.948 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:16:56.948 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:16:56.948 -08 000000075 INF: Tilt Motor 3: After move to 5.2697, error = 0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:56.948 -08 000000053 INF: FPGA: Xmit T1RD\n
17-02-28 20:16:56.948 -08 000000075 INF: Tilt Motor 3: Moved to 5.2710 after 510.8239 ms
17-02-28 20:16:56.948 -08 000000101 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:16:56.948 -08 000000101 INF: Tilt Motor 2: After move to 5.2438, error = 0.0005, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:56.948 -08 000000101 INF: Tilt Motor 2: Moved to 5.2443 after 510.882 ms
17-02-28 20:16:56.949 -08 000000101 INF: ======================================
17-02-28 20:16:56.949 -08 000000075 INF: ======================================
17-02-28 20:16:57.012 -08 000000086 INF: FPGA: Recv T1RD 20392
17-02-28 20:16:57.013 -08 000000053 INF: Tilt Motor 1: Encoder: at motor step 3398 + 4/6
17-02-28 20:16:57.013 -08 000000053 INF: Tilt Motor 1: After move to 5.1808, error = -0.0012, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:57.013 -08 000000053 INF: Tilt Motor 1: Moved to 5.1796 after 575.3567 ms
17-02-28 20:16:57.013 -08 000000053 INF: ======================================
17-02-28 20:16:57.014 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:57.015 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:16:57.016 -08 000000018 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.18080799463558, m2=5.24379999463558, m3=5.26970799463558
17-02-28 20:16:57.022 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:16:57.029 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:16:57.031 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:16:57.031 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:57.031 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:16:57.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.035 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:16:57.035 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:16:57.035 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:16:57.072 -08 000000029 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:57.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.073 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:16:57.073 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.1381 mm
17-02-28 20:16:57.073 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:16:57.136 -08 000000052 INF: FPGA: Recv ZTRG 
17-02-28 20:16:57.137 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:16:57.196 -08 000000037 INF: FPGA: Recv ZYT 
17-02-28 20:16:57.196 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:16:57.196 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:16:57.262 -08 000000044 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:16:57.262 -08 000000044 INF: FPGA: Recv ZMV 
17-02-28 20:16:57.262 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:16:57.262 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 66.0759 ms
17-02-28 20:16:57.262 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:16:57.321 -08 000000051 INF: FPGA: Recv ZDACR 60292
17-02-28 20:16:57.321 -08 000000018 INF: Z Motor: MoveAndTrigger took 248.2758 ms w/comms
17-02-28 20:16:57.321 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:16:57.321 -08 000000018 INF: Z Motor: MoveAbsStepped took 248.5587 ms
17-02-28 20:16:57.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.323 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:16:57.338 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:57.338 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.339 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.339 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:16:57.339 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:16:57.386 -08 000000074 INF: FPGA: Recv ZSTEP 
17-02-28 20:16:57.397 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:16:57.397 -08 000000018 INF: Transformed XStagePosition from 6.138931 mm to 6.13893127441406 mm.
17-02-28 20:16:57.406 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:16:57.406 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.406 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:16:57.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:57.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:16:57.409 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:16:57.409 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-02-28 20:16:57.409 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:57.410 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:16:57.411 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:16:57.411 -08 000000030 INF: ===================MoveEmissionFilters===================
17-02-28 20:16:57.411 -08 000000098 INF: ===================Move X,Y, Parallel===================
17-02-28 20:16:57.412 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:57.412 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:57.412 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:57.412 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:16:57.412 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:16:57.412 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:57.412 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:16:57.412 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:57.412 -08 000000109 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8421 mm
17-02-28 20:16:57.413 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:57.413 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:16:57.413 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:16:57.413 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:16:57.413 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:16:57.414 -08 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:16:57.414 -08 000000075 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:16:57.414 -08 000000104 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:16:57.414 -08 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:16:57.414 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:16:57.414 -08 000000023 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:16:57.414 -08 000000075 INF: ======================================
17-02-28 20:16:57.415 -08 000000023 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:16:57.415 -08 000000085 INF: ======================================
17-02-28 20:16:57.415 -08 000000023 INF: ======================================
17-02-28 20:16:57.415 -08 000000104 INF: ======================================
17-02-28 20:16:57.416 -08 000000051 INF: ======================================
17-02-28 20:16:57.416 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:16:57.417 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:16:57.417 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:16:57.417 -08 000000105 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:16:57.417 -08 000000089 INF: ======================================
17-02-28 20:16:57.418 -08 000000090 INF: ======================================
17-02-28 20:16:57.418 -08 000000105 INF: ======================================
17-02-28 20:16:57.418 -08 000000106 INF: ======================================
17-02-28 20:16:57.419 -08 000000025 INF: ======================================
17-02-28 20:16:57.419 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:16:57.419 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:16:57.420 -08 000000057 INF: ======================================
17-02-28 20:16:57.421 -08 000000037 INF: ======================================
17-02-28 20:16:57.422 -08 000000030 INF: ======================================
17-02-28 20:16:57.450 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:16:57.450 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.450 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:16:57.450 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:16:57.450 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:16:57.512 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:16:57.512 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Moving to 6.1389 mm @15.000 mm/sec, started at 26.0947 mm
17-02-28 20:16:57.512 -08 000000066 INF: X Motor: Xmit MA -21652\n
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:16:57.574 -08 000000066 INF: X Motor: Recv MA -21652\r\n>
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:16:57.574 -08 000000066 INF: X Motor: WaitUntilStopped 61330
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:16:57.574 -08 000000109 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:16:57.637 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.637 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:16:57.637 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:16:57.698 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:16:57.698 -08 000000109 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:16:57.698 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:57.824 -08 000000109 INF: Y Motor: Unshifted Position: 1064460
17-02-28 20:16:57.874 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:57.997 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.134 -08 000000109 INF: Y Motor: Unshifted Position: 1768364
17-02-28 20:16:58.184 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.309 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.448 -08 000000109 INF: Y Motor: Unshifted Position: 2553379
17-02-28 20:16:58.498 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.622 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.758 -08 000000109 INF: Y Motor: Unshifted Position: 3331677
17-02-28 20:16:58.808 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:58.941 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.070 -08 000000109 INF: Y Motor: Unshifted Position: 4115114
17-02-28 20:16:59.120 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.245 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.384 -08 000000109 INF: Y Motor: Unshifted Position: 4897516
17-02-28 20:16:59.434 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.446 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:16:59.508 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:16:59.508 -08 000000066 INF: X Motor: Moved to 6.1387 after 1934 ms
17-02-28 20:16:59.508 -08 000000066 INF: ======================================
17-02-28 20:16:59.561 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.696 -08 000000109 INF: Y Motor: Unshifted Position: 5668842
17-02-28 20:16:59.746 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:16:59.870 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:00.006 -08 000000109 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:17:00.006 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:00.006 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:00.072 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:00.072 -08 000000109 INF: Y Motor: Moved to 64.4706 after 2374 ms
17-02-28 20:17:00.072 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:00.131 -08 000000109 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:00.131 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:00.131 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:00.193 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:00.193 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:00.193 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:00.258 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:00.320 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:00.382 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:00.382 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:00.382 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:00.444 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:00.444 -08 000000109 INF: ======================================
17-02-28 20:17:00.446 -08 000000098 INF: ===================Move X,Y===================
17-02-28 20:17:00.448 -08 000000098 INF: ======================================
17-02-28 20:17:00.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:00.451 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:00.451 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:17:00.451 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:17:00.506 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:00.506 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:17:00.566 -08 000000095 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:00.566 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:00.567 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:00.567 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:00.628 -08 000000066 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:17:00.628 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:17:00.629 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:00.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:00.631 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.631 -08 000000051 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:00.631 -08 000000085 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:00.632 -08 000000051 INF: ======================================
17-02-28 20:17:00.632 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.633 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:00.634 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:00.634 -08 000000085 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:17:00.694 -08 000000086 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:00.695 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:00.697 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:00.698 -08 000000085 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:17:00.753 -08 000000023 INF: FPGA: Recv TDIYARM2
17-02-28 20:17:00.754 -08 000000085 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:00.756 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.758 -08 000000085 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:00.759 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:00.761 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:00.762 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:00.764 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:01.143 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:01.143 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:01.143 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:01.159 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:01.162 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:01.545 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:01.545 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:01.545 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:01.561 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:01.563 -08 000000085 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:01.565 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:01.567 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:01.568 -08 000000085 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:01.568 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:01.570 -08 000000085 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:01.570 -08 000000085 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:01.570 -08 000000085 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:17:01.570 -08 000000085 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:17:01.628 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:17:01.628 -08 000000085 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:17:01.628 -08 000000085 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:17:01.690 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:17:01.690 -08 000000085 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9131 ms
17-02-28 20:17:01.690 -08 000000085 INF: Z Motor: ArmAbsStepped took 120.1861 ms
17-02-28 20:17:01.691 -08 000000085 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:01.693 -08 000000085 INF: ===================TDI Scan Setup===================
17-02-28 20:17:01.695 -08 000000085 INF: ======================================
17-02-28 20:17:01.696 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:01.698 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:01.698 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:01.699 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:01.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:01.701 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:01.701 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:01.701 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:01.701 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:01.701 -08 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:01.701 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:01.701 -08 000000023 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:01.701 -08 000000023 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:01.701 -08 000000023 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:01.703 -08 000000023 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:02.064 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:17:02.064 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:17:02.064 -08 000000023 INF: Excitation Filter 1: Moved -107 steps in 362.5451 ms
17-02-28 20:17:02.064 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 362.9583 ms
17-02-28 20:17:02.064 -08 000000023 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 362.7367 ms
17-02-28 20:17:02.064 -08 000000023 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 362.8621 ms
17-02-28 20:17:02.064 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.0841 ms
17-02-28 20:17:02.064 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.3142 ms
17-02-28 20:17:02.065 -08 000000023 INF: ======================================
17-02-28 20:17:02.065 -08 000000038 INF: ======================================
17-02-28 20:17:02.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:02.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:02.069 -08 000000089 INF: ===================Serial===================
17-02-28 20:17:02.069 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:17:02.069 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:02.069 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:02.070 -08 000000089 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:17:02.070 -08 000000089 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:02.070 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:02.071 -08 000000098 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:02.071 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:17:02.071 -08 000000098 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:02.071 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:17:02.071 -08 000000045 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:17:02.071 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:02.071 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:02.072 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.072 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.073 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.073 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.128 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.128 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:02.128 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:02.190 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.190 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:02.222 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.222 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.223 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.223 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:17:02.256 -08 000000045 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:17:02.318 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.318 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:17:02.318 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:02.372 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.372 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.373 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.373 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.377 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:02.377 -08 000000045 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:17:02.377 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.504 -08 000000045 INF: Y Motor: Unshifted Position: 5929035
17-02-28 20:17:02.522 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.522 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.523 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:02.523 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:02.554 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.672 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:02.672 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:02.672 -08 000000099 INF: ===================Camera #0 Frame #1===================
17-02-28 20:17:02.673 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:02.673 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:02.673 -08 000000030 INF: ===================Camera #2 Frame #1===================
17-02-28 20:17:02.678 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.814 -08 000000045 INF: Y Motor: Unshifted Position: 5882530
17-02-28 20:17:02.825 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:02.825 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:02.825 -08 000000099 INF: ===================Camera #0 Frame #3===================
17-02-28 20:17:02.826 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:02.826 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:02.826 -08 000000030 INF: ===================Camera #2 Frame #3===================
17-02-28 20:17:02.864 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:02.982 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:02.982 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:02.982 -08 000000099 INF: ===================Camera #0 Frame #4===================
17-02-28 20:17:02.983 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:02.983 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:02.983 -08 000000030 INF: ===================Camera #2 Frame #4===================
17-02-28 20:17:02.991 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.129 -08 000000045 INF: Y Motor: Unshifted Position: 5835524
17-02-28 20:17:03.135 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:03.135 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:03.135 -08 000000099 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:03.136 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:03.136 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:03.136 -08 000000030 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:03.179 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.188 -08 000000057 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:03.188 -08 000000057 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:03.188 -08 000000089 INF: ===================Serial===================
17-02-28 20:17:03.189 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:03.190 -08 000000089 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:17:03.190 -08 000000098 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:03.190 -08 000000089 INF: ===================Serial===================
17-02-28 20:17:03.191 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:03.191 -08 000000074 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:03.191 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:03.191 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:03.191 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:03.191 -08 000000074 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:03.191 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:03.191 -08 000000074 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:03.191 -08 000000074 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:03.192 -08 000000089 INF: ======================================
17-02-28 20:17:03.194 -08 000000074 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:03.288 -08 000000099 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:03.288 -08 000000099 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:03.288 -08 000000099 INF: ===================Camera #0 Frame #6===================
17-02-28 20:17:03.289 -08 000000030 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:03.289 -08 000000030 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:03.289 -08 000000030 INF: ===================Camera #2 Frame #6===================
17-02-28 20:17:03.291 -08 000000099 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:03.292 -08 000000099 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:03.292 -08 000000030 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:03.293 -08 000000030 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:03.304 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.318 -08 000000099 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:03.318 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:17:03.319 -08 000000099 INF: ======================================
17-02-28 20:17:03.342 -08 000000030 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:03.342 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:17:03.343 -08 000000030 INF: ======================================
17-02-28 20:17:03.345 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:17:03.346 -08 000000047 INF: ======================================
17-02-28 20:17:03.438 -08 000000045 INF: Y Motor: Unshifted Position: 5790764
17-02-28 20:17:03.488 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:03.563 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:17:03.563 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:17:03.563 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 371.5505 ms
17-02-28 20:17:03.563 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6724 ms
17-02-28 20:17:03.563 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.75 ms
17-02-28 20:17:03.563 -08 000000074 INF: Excitation Filter 2: Moved 107 steps in 371.4124 ms
17-02-28 20:17:03.563 -08 000000074 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8652 ms
17-02-28 20:17:03.563 -08 000000074 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.937 ms
17-02-28 20:17:03.563 -08 000000060 INF: ======================================
17-02-28 20:17:03.564 -08 000000074 INF: ======================================
17-02-28 20:17:03.565 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:03.566 -08 000000098 INF: ======================================
17-02-28 20:17:03.627 -08 000000045 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:17:03.627 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:03.627 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:03.689 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:03.689 -08 000000045 INF: Y Motor: Moved to 62.9074 after 1312 ms
17-02-28 20:17:03.689 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:03.753 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:03.753 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:03.753 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:03.815 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:03.815 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:03.815 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:03.875 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:03.937 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:04.002 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:04.002 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:04.002 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:04.064 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:17:04.064 -08 000000045 INF: ======================================
17-02-28 20:17:04.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:04.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:04.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.067 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:04.123 -08 000000087 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:04.123 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:04.189 -08 000000060 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:17:04.190 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:04.249 -08 000000066 INF: FPGA: Recv ZADCR 2423
17-02-28 20:17:04.249 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:17:04.249 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:04.311 -08 000000047 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:17:04.311 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:17:04.311 -08 000000018 INF: TDIScan finished after 6914.5307 ms
17-02-28 20:17:04.311 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:04.311 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:04.311 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:04.373 -08 000000066 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:04.374 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.374 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.375 -08 000000085 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:04.375 -08 000000109 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:04.376 -08 000000085 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:04.376 -08 000000085 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:04.376 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:04.376 -08 000000109 INF: ======================================
17-02-28 20:17:04.376 -08 000000086 INF: ======================================
17-02-28 20:17:04.437 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:17:04.437 -08 000000085 INF: ======================================
17-02-28 20:17:04.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:04.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.480 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:04.536 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.537 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:04.561 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.561 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:04.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:04.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:04.610 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:04.611 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:17:04.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:04.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:17:04.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:17:05.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:17:05.266 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0506907652918959Best Z position at top surface = -0.123520241324241Best Z position at top surface + compensator offset = -0.100820241324241 C:3,L:1,B
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.123520241324241
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.73835
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0506907652918959
17-02-28 20:17:05.268 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.38749
17-02-28 20:17:05.268 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0506907652918959.
17-02-28 20:17:05.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:05.401 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:05.401 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:05.435 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:05.436 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:17:05.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.439 -08 000000053 INF: ===================Move Tilt Motor 2===================
17-02-28 20:17:05.439 -08 000000098 INF: ===================Move Tilt Motor 3===================
17-02-28 20:17:05.439 -08 000000109 INF: ===================Move Tilt Motor 1===================
17-02-28 20:17:05.440 -08 000000098 INF: Tilt Motor 3: Moving to 5.2697 mm, started at 5.2710 mm, delta = -0.0013 mm
17-02-28 20:17:05.440 -08 000000053 INF: ======================================
17-02-28 20:17:05.440 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.440 -08 000000109 INF: Tilt Motor 1: Moving to 5.1808 mm, started at 5.1796 mm, delta = 0.0012 mm
17-02-28 20:17:05.441 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.495 -08 000000044 INF: FPGA: Recv T3RD 20752
17-02-28 20:17:05.495 -08 000000044 INF: FPGA: Recv T1RD 20391
17-02-28 20:17:05.495 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3458 + 4/6
17-02-28 20:17:05.495 -08 000000098 INF: Tilt Motor 3: Moving to 20747 encoder counts
17-02-28 20:17:05.495 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 3/6
17-02-28 20:17:05.495 -08 000000109 INF: Tilt Motor 1: Moving to 20397 encoder counts
17-02-28 20:17:05.495 -08 000000098 INF: FPGA: Xmit T3MOVETO 20747\n
17-02-28 20:17:05.496 -08 000000109 INF: FPGA: Xmit T1MOVETO 20397\n
17-02-28 20:17:05.562 -08 000000074 INF: FPGA: Recv T1MOVETO 0
17-02-28 20:17:05.562 -08 000000074 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:17:05.563 -08 000000098 INF: Tilt Motor 3: To move from 5.271 to 5.270 (-0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:17:05.563 -08 000000109 INF: Tilt Motor 1: To move from 5.179 to 5.181 (0.001 mm) should take 1 steps, but required 0 steps (0.000 mm). Slippage = -0.002 mm (-1.23%)
17-02-28 20:17:05.563 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.564 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.622 -08 000000039 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:05.622 -08 000000039 INF: FPGA: Recv T1RD 20393
17-02-28 20:17:05.622 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:17:05.622 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.622 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:05.623 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.684 -08 000000105 INF: FPGA: Recv T1RD 20393
17-02-28 20:17:05.684 -08 000000105 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:05.684 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:05.684 -08 000000098 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:05.684 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:17:05.685 -08 000000109 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:05.746 -08 000000066 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:05.746 -08 000000066 INF: FPGA: Recv T1RD 20393
17-02-28 20:17:05.746 -08 000000109 INF: Tilt Motor 1: Encoder: at motor step 3398 + 5/6
17-02-28 20:17:05.746 -08 000000109 INF: Tilt Motor 1: After move to 5.1808, error = -0.0010, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:05.746 -08 000000098 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:05.746 -08 000000109 INF: Tilt Motor 1: Moved to 5.1798 after 306.1744 ms
17-02-28 20:17:05.746 -08 000000098 INF: Tilt Motor 3: After move to 5.2697, error = -0.0002, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:05.746 -08 000000098 INF: Tilt Motor 3: Moved to 5.2695 after 306.6062 ms
17-02-28 20:17:05.746 -08 000000109 INF: ======================================
17-02-28 20:17:05.747 -08 000000098 INF: ======================================
17-02-28 20:17:05.748 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.748 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.749 -08 000000018 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.18080799463558, m2=5.24379999463558, m3=5.26970799463558
17-02-28 20:17:05.749 -08 000000018 INF: ETF Best Z: -0.05069077 mm (13288 DAC)
17-02-28 20:17:05.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.750 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:17:05.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:05.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:06.148 -08 000000018 INF: Swath 1 position calculated to be: {X=5.567337, Y=39.70494} from estimated center X= 6.061996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:06.148 -08 000000018 INF: Swath 2 position calculated to be: {X=6.675336, Y=39.70494} from estimated center X= 6.061996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:06.155 -08 000000018 INF: Swath 0: Converted transform from (99.46274, -64.47903) pixels to (0.034155, -0.02208) mm.
17-02-28 20:17:06.161 -08 000000018 INF: Swath 1: Converted transform from (63.43083, -63.16562) pixels to (0.021735, -0.021735) mm.
17-02-28 20:17:06.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:06.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:06.163 -08 000000018 INF: Transformed XStagePosition from 5.567337 mm to 5.60149155929685 mm.
17-02-28 20:17:06.174 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4728657392562 mm.
17-02-28 20:17:06.174 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2728657392561 mm.
17-02-28 20:17:06.174 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3636157392561 mm.
17-02-28 20:17:06.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:06.177 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:06.177 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:06.177 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-02-28 20:17:06.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:06.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:06.184 -08 000000099 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:06.184 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:17:06.184 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:06.185 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:06.185 -08 000000025 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:06.185 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:06.185 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:06.185 -08 000000101 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:06.185 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:06.185 -08 000000089 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:06.185 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:06.186 -08 000000089 INF: Z Motor: Moving to -0.0707 mm, started at -0.0100 mm
17-02-28 20:17:06.186 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:06.186 -08 000000089 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:17:06.186 -08 000000023 INF: ===================Move X Motor without settling===================
17-02-28 20:17:06.186 -08 000000038 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:06.186 -08 000000101 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:06.186 -08 000000023 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:06.186 -08 000000038 INF: Y Motor: Moving to 64.4729 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:17:06.186 -08 000000037 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:06.186 -08 000000082 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:06.186 -08 000000057 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:06.187 -08 000000082 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:06.187 -08 000000038 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:06.187 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:06.187 -08 000000105 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:06.187 -08 000000058 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:06.187 -08 000000057 INF: ======================================
17-02-28 20:17:06.187 -08 000000105 INF: ======================================
17-02-28 20:17:06.188 -08 000000058 INF: ======================================
17-02-28 20:17:06.188 -08 000000090 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:06.188 -08 000000037 INF: ======================================
17-02-28 20:17:06.188 -08 000000082 INF: ======================================
17-02-28 20:17:06.188 -08 000000090 INF: ======================================
17-02-28 20:17:06.188 -08 000000098 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:06.189 -08 000000101 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:06.189 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:06.189 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:06.190 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:06.190 -08 000000098 INF: ======================================
17-02-28 20:17:06.190 -08 000000101 INF: ======================================
17-02-28 20:17:06.190 -08 000000058 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:06.190 -08 000000010 INF: ======================================
17-02-28 20:17:06.190 -08 000000058 INF: ======================================
17-02-28 20:17:06.190 -08 000000066 INF: ======================================
17-02-28 20:17:06.191 -08 000000109 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:06.192 -08 000000109 INF: ======================================
17-02-28 20:17:06.193 -08 000000099 INF: ======================================
17-02-28 20:17:06.197 -08 000000052 INF: FPGA: Recv ZTRG 
17-02-28 20:17:06.197 -08 000000089 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:17:06.263 -08 000000058 INF: FPGA: Recv ZYT 
17-02-28 20:17:06.263 -08 000000089 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:17:06.263 -08 000000089 INF: FPGA: Xmit ZMV 18531\n
17-02-28 20:17:06.265 -08 000000023 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:06.265 -08 000000023 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:06.266 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.266 -08 000000038 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:06.266 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:06.325 -08 000000051 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:17:06.325 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:06.327 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.327 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Moving to 5.6015 mm @15.000 mm/sec, started at 6.1387 mm
17-02-28 20:17:06.327 -08 000000023 INF: X Motor: Xmit MA -21872\n
17-02-28 20:17:06.387 -08 000000090 INF: FPGA: Recv ZMV 
17-02-28 20:17:06.387 -08 000000089 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.8365 ms
17-02-28 20:17:06.387 -08 000000089 INF: FPGA: Xmit ZDACR\n
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:06.389 -08 000000023 INF: X Motor: Recv MA -21872\r\n>
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Set target position to 5947287 encoder counts
17-02-28 20:17:06.389 -08 000000038 INF: Y Motor: Xmit s r0xca 5947287\r
17-02-28 20:17:06.389 -08 000000023 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:17:06.449 -08 000000085 INF: FPGA: Recv ZDACR 18531
17-02-28 20:17:06.449 -08 000000089 INF: Z Motor: MoveAndTrigger took 262.6192 ms w/comms
17-02-28 20:17:06.449 -08 000000089 INF: Z Motor: After move to -0.0707, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:06.449 -08 000000089 INF: Z Motor: MoveAbsStepped took 262.9606 ms
17-02-28 20:17:06.450 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:06.451 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.451 -08 000000038 INF: Y Motor: Start the move command
17-02-28 20:17:06.451 -08 000000038 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:06.451 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:06.452 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.452 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:17:06.453 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.453 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:06.453 -08 000000099 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:06.454 -08 000000099 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:06.454 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:06.454 -08 000000099 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:06.511 -08 000000075 INF: FPGA: Recv ZSEL 
17-02-28 20:17:06.512 -08 000000099 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:06.512 -08 000000099 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:06.513 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:06.513 -08 000000038 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:17:06.513 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:06.573 -08 000000046 INF: FPGA: Recv TDIBB
17-02-28 20:17:06.573 -08 000000099 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:06.574 -08 000000099 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:06.575 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.576 -08 000000099 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:06.576 -08 000000099 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:06.576 -08 000000099 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:06.635 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:06.635 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.637 -08 000000038 INF: Y Motor: Unshifted Position: 5872214
17-02-28 20:17:06.637 -08 000000099 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:06.637 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.639 -08 000000099 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:06.639 -08 000000099 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:06.639 -08 000000099 INF: Z Motor: Arming to move to -0.0307 mm
17-02-28 20:17:06.639 -08 000000099 INF: FPGA: Xmit ZYT 6427287 4\n
17-02-28 20:17:06.687 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:06.697 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:17:06.697 -08 000000099 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372214 enc / 63.722 mm / ) = 6427287 enc / 64.273 mm
17-02-28 20:17:06.697 -08 000000099 INF: FPGA: Xmit ZARM 8045\n
17-02-28 20:17:06.762 -08 000000060 INF: FPGA: Recv ZARM
17-02-28 20:17:06.762 -08 000000099 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9449 ms
17-02-28 20:17:06.762 -08 000000099 INF: Z Motor: ArmAbsStepped took 122.7332 ms
17-02-28 20:17:06.762 -08 000000099 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:06.764 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.765 -08 000000099 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:06.766 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.767 -08 000000099 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:06.768 -08 000000099 INF: ===================TDI Scan Setup===================
17-02-28 20:17:06.769 -08 000000099 INF: ======================================
17-02-28 20:17:06.814 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:06.826 -08 000000023 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:06.888 -08 000000023 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:06.888 -08 000000023 INF: X Motor: Moved to 5.6016 after 498 ms
17-02-28 20:17:06.888 -08 000000023 INF: ======================================
17-02-28 20:17:06.950 -08 000000038 INF: Y Motor: Unshifted Position: 5947288
17-02-28 20:17:06.950 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:06.950 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:07.012 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:07.012 -08 000000038 INF: Y Motor: Moved to 64.4729 after 499 ms
17-02-28 20:17:07.012 -08 000000038 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:07.074 -08 000000038 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:07.074 -08 000000038 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:07.074 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:07.136 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:07.136 -08 000000038 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:07.136 -08 000000038 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:07.199 -08 000000038 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:07.261 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:07.323 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:07.323 -08 000000038 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:07.323 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:07.388 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:17:07.388 -08 000000038 INF: ======================================
17-02-28 20:17:07.389 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:17:07.390 -08 000000025 INF: ======================================
17-02-28 20:17:07.422 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:07.422 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:07.422 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:07.437 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:07.439 -08 000000057 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:08.491 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:08.492 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:08.492 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:08.507 -08 000000057 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:08.509 -08 000000057 INF: ===================Camera Arm TDI===================
17-02-28 20:17:08.510 -08 000000057 INF: ======================================
17-02-28 20:17:08.511 -08 000000089 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:08.512 -08 000000089 INF: ======================================
17-02-28 20:17:08.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:08.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:08.514 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:08.514 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:08.572 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:08.572 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:08.632 -08 000000030 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:08.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:08.632 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:08.632 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:08.694 -08 000000101 INF: FPGA: Recv TDIYERD 6447288
17-02-28 20:17:08.694 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447288 counts (64.473 mm)
17-02-28 20:17:08.694 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:08.695 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:08.695 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:08.695 -08 000000025 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:08.696 -08 000000025 INF: ======================================
17-02-28 20:17:08.696 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:08.697 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:08.697 -08 000000098 INF: FPGA: Xmit TDIYPOS 6336362\n
17-02-28 20:17:08.756 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:08.756 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:08.757 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:08.758 -08 000000098 INF: FPGA: Xmit TDIYARM3 139264 6427287 1 1\n
17-02-28 20:17:08.821 -08 000000074 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:08.821 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:08.822 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:08.823 -08 000000098 INF: ======================================
17-02-28 20:17:08.824 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:08.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:08.825 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:08.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:08.826 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:08.827 -08 000000075 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:08.827 -08 000000108 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:08.827 -08 000000075 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:08.827 -08 000000075 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:08.827 -08 000000075 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:08.827 -08 000000108 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:08.827 -08 000000075 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:08.827 -08 000000108 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:08.827 -08 000000108 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:08.828 -08 000000108 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:09.194 -08 000000023 INF: FPGA: Recv EX2MV
17-02-28 20:17:09.194 -08 000000023 INF: FPGA: Recv EX1MV
17-02-28 20:17:09.194 -08 000000075 INF: Excitation Filter 2: Moved -107 steps in 367.1097 ms
17-02-28 20:17:09.194 -08 000000075 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.2378 ms
17-02-28 20:17:09.194 -08 000000075 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.3074 ms
17-02-28 20:17:09.194 -08 000000108 INF: Excitation Filter 1: Moved -107 steps in 366.9968 ms
17-02-28 20:17:09.194 -08 000000108 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.4154 ms
17-02-28 20:17:09.194 -08 000000075 INF: ======================================
17-02-28 20:17:09.194 -08 000000108 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.4819 ms
17-02-28 20:17:09.195 -08 000000108 INF: ======================================
17-02-28 20:17:09.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:09.197 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:09.197 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:17:09.197 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:09.198 -08 000000052 INF: ===================FPGA Z Wait===================
17-02-28 20:17:09.198 -08 000000037 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:09.198 -08 000000037 INF: Y Motor: Moving to 14.8245 mm @6.500 mm/sec, started at 64.4729 mm
17-02-28 20:17:09.198 -08 000000037 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:09.198 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:09.198 -08 000000052 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:09.198 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:09.198 -08 000000105 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:09.199 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:09.199 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:17:09.201 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:09.201 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.201 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.201 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.201 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.258 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.258 -08 000000037 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:09.258 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:09.321 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.321 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:09.352 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.352 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.352 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.352 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Set target position to 982453 encoder counts
17-02-28 20:17:09.382 -08 000000037 INF: Y Motor: Xmit s r0xca 982453\r
17-02-28 20:17:09.447 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.447 -08 000000037 INF: Y Motor: Start the move command
17-02-28 20:17:09.447 -08 000000037 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:09.502 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.502 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:09.502 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.502 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:09.509 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:09.509 -08 000000037 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:09.509 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:09.569 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:09.569 -08 000000052 INF: ======================================
17-02-28 20:17:09.633 -08 000000037 INF: Y Motor: Unshifted Position: 5885431
17-02-28 20:17:09.652 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:09.652 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:09.652 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:09.652 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:09.652 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:09.652 -08 000000053 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:09.683 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:09.807 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:09.817 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:09.817 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:09.817 -08 000000053 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:09.818 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:09.818 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:09.818 -08 000000050 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:09.946 -08 000000037 INF: Y Motor: Unshifted Position: 5681983
17-02-28 20:17:09.985 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:09.985 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:09.985 -08 000000053 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:09.987 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:09.987 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:09.987 -08 000000050 INF: ===================Camera #2 Frame #17===================
17-02-28 20:17:09.996 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.120 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.153 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:10.153 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:10.153 -08 000000053 INF: ===================Camera #0 Frame #23===================
17-02-28 20:17:10.156 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:10.156 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:10.156 -08 000000050 INF: ===================Camera #2 Frame #23===================
17-02-28 20:17:10.256 -08 000000037 INF: Y Motor: Unshifted Position: 5480278
17-02-28 20:17:10.306 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.321 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:17:10.321 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:17:10.321 -08 000000053 INF: ===================Camera #0 Frame #29===================
17-02-28 20:17:10.325 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:17:10.325 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:17:10.325 -08 000000050 INF: ===================Camera #2 Frame #29===================
17-02-28 20:17:10.433 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.489 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:17:10.489 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:17:10.489 -08 000000053 INF: ===================Camera #0 Frame #35===================
17-02-28 20:17:10.494 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:10.494 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:10.494 -08 000000050 INF: ===================Camera #2 Frame #36===================
17-02-28 20:17:10.569 -08 000000037 INF: Y Motor: Unshifted Position: 5276819
17-02-28 20:17:10.619 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.657 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:10.657 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:10.657 -08 000000053 INF: ===================Camera #0 Frame #42===================
17-02-28 20:17:10.667 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:10.667 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:10.667 -08 000000050 INF: ===================Camera #2 Frame #42===================
17-02-28 20:17:10.743 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.830 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:10.830 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:10.830 -08 000000053 INF: ===================Camera #0 Frame #48===================
17-02-28 20:17:10.838 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:10.838 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:10.838 -08 000000050 INF: ===================Camera #2 Frame #48===================
17-02-28 20:17:10.883 -08 000000037 INF: Y Motor: Unshifted Position: 5075101
17-02-28 20:17:10.933 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:10.998 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:17:10.998 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:17:10.998 -08 000000053 INF: ===================Camera #0 Frame #54===================
17-02-28 20:17:11.008 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:17:11.008 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:17:11.008 -08 000000050 INF: ===================Camera #2 Frame #54===================
17-02-28 20:17:11.057 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.167 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:17:11.167 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:17:11.167 -08 000000053 INF: ===================Camera #0 Frame #60===================
17-02-28 20:17:11.178 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:17:11.178 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:17:11.178 -08 000000050 INF: ===================Camera #2 Frame #61===================
17-02-28 20:17:11.194 -08 000000037 INF: Y Motor: Unshifted Position: 4871003
17-02-28 20:17:11.244 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.336 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:11.336 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:11.336 -08 000000053 INF: ===================Camera #0 Frame #67===================
17-02-28 20:17:11.351 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:11.351 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:11.351 -08 000000050 INF: ===================Camera #2 Frame #67===================
17-02-28 20:17:11.368 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.504 -08 000000037 INF: Y Motor: Unshifted Position: 4668637
17-02-28 20:17:11.509 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:11.509 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:11.509 -08 000000053 INF: ===================Camera #0 Frame #73===================
17-02-28 20:17:11.522 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:11.522 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:11.522 -08 000000050 INF: ===================Camera #2 Frame #73===================
17-02-28 20:17:11.554 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.678 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:17:11.678 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:17:11.678 -08 000000053 INF: ===================Camera #0 Frame #79===================
17-02-28 20:17:11.681 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.692 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:17:11.692 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:17:11.692 -08 000000050 INF: ===================Camera #2 Frame #80===================
17-02-28 20:17:11.817 -08 000000037 INF: Y Motor: Unshifted Position: 4464955
17-02-28 20:17:11.848 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:17:11.848 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:17:11.848 -08 000000053 INF: ===================Camera #0 Frame #85===================
17-02-28 20:17:11.866 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:17:11.866 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:17:11.866 -08 000000050 INF: ===================Camera #2 Frame #86===================
17-02-28 20:17:11.867 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:11.991 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.017 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:12.017 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:12.017 -08 000000053 INF: ===================Camera #0 Frame #92===================
17-02-28 20:17:12.037 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:12.037 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:12.037 -08 000000050 INF: ===================Camera #2 Frame #92===================
17-02-28 20:17:12.131 -08 000000037 INF: Y Motor: Unshifted Position: 4263243
17-02-28 20:17:12.181 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.190 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:17:12.190 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:17:12.190 -08 000000053 INF: ===================Camera #0 Frame #98===================
17-02-28 20:17:12.208 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:17:12.208 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:17:12.208 -08 000000050 INF: ===================Camera #2 Frame #99===================
17-02-28 20:17:12.305 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.360 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:17:12.360 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:17:12.360 -08 000000053 INF: ===================Camera #0 Frame #104===================
17-02-28 20:17:12.382 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:17:12.382 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:17:12.382 -08 000000050 INF: ===================Camera #2 Frame #105===================
17-02-28 20:17:12.441 -08 000000037 INF: Y Motor: Unshifted Position: 4059353
17-02-28 20:17:12.491 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.530 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:17:12.530 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:17:12.530 -08 000000053 INF: ===================Camera #0 Frame #110===================
17-02-28 20:17:12.553 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:17:12.553 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:17:12.553 -08 000000050 INF: ===================Camera #2 Frame #111===================
17-02-28 20:17:12.615 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.700 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:17:12.700 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:17:12.700 -08 000000053 INF: ===================Camera #0 Frame #117===================
17-02-28 20:17:12.724 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:17:12.724 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:17:12.724 -08 000000050 INF: ===================Camera #2 Frame #118===================
17-02-28 20:17:12.755 -08 000000037 INF: Y Motor: Unshifted Position: 3857635
17-02-28 20:17:12.805 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:12.873 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:17:12.873 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:17:12.873 -08 000000053 INF: ===================Camera #0 Frame #123===================
17-02-28 20:17:12.898 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:17:12.898 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:17:12.898 -08 000000050 INF: ===================Camera #2 Frame #124===================
17-02-28 20:17:12.929 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.043 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:17:13.043 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:17:13.043 -08 000000053 INF: ===================Camera #0 Frame #129===================
17-02-28 20:17:13.065 -08 000000037 INF: Y Motor: Unshifted Position: 3653320
17-02-28 20:17:13.069 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:17:13.069 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:17:13.069 -08 000000050 INF: ===================Camera #2 Frame #130===================
17-02-28 20:17:13.115 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.213 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:17:13.213 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:17:13.213 -08 000000053 INF: ===================Camera #0 Frame #136===================
17-02-28 20:17:13.239 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.240 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:17:13.240 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:17:13.240 -08 000000050 INF: ===================Camera #2 Frame #137===================
17-02-28 20:17:13.379 -08 000000037 INF: Y Motor: Unshifted Position: 3451818
17-02-28 20:17:13.386 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:17:13.386 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:17:13.386 -08 000000053 INF: ===================Camera #0 Frame #142===================
17-02-28 20:17:13.414 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:17:13.414 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:17:13.414 -08 000000050 INF: ===================Camera #2 Frame #143===================
17-02-28 20:17:13.429 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.553 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.556 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:17:13.556 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:17:13.556 -08 000000053 INF: ===================Camera #0 Frame #148===================
17-02-28 20:17:13.585 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:17:13.585 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:17:13.585 -08 000000050 INF: ===================Camera #2 Frame #149===================
17-02-28 20:17:13.689 -08 000000037 INF: Y Motor: Unshifted Position: 3247718
17-02-28 20:17:13.726 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:17:13.726 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:17:13.726 -08 000000053 INF: ===================Camera #0 Frame #155===================
17-02-28 20:17:13.739 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.756 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:17:13.756 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:17:13.756 -08 000000050 INF: ===================Camera #2 Frame #156===================
17-02-28 20:17:13.863 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:13.899 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:17:13.899 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:17:13.899 -08 000000053 INF: ===================Camera #0 Frame #161===================
17-02-28 20:17:13.930 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:17:13.930 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:17:13.930 -08 000000050 INF: ===================Camera #2 Frame #162===================
17-02-28 20:17:14.003 -08 000000037 INF: Y Motor: Unshifted Position: 3046010
17-02-28 20:17:14.053 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.069 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:17:14.069 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:17:14.069 -08 000000053 INF: ===================Camera #0 Frame #167===================
17-02-28 20:17:14.101 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:17:14.101 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:17:14.101 -08 000000050 INF: ===================Camera #2 Frame #168===================
17-02-28 20:17:14.179 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.239 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:17:14.239 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:17:14.239 -08 000000053 INF: ===================Camera #0 Frame #173===================
17-02-28 20:17:14.272 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:17:14.272 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:17:14.272 -08 000000050 INF: ===================Camera #2 Frame #175===================
17-02-28 20:17:14.314 -08 000000037 INF: Y Motor: Unshifted Position: 2842348
17-02-28 20:17:14.364 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.409 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:17:14.409 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:17:14.409 -08 000000053 INF: ===================Camera #0 Frame #180===================
17-02-28 20:17:14.446 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:17:14.446 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:17:14.446 -08 000000050 INF: ===================Camera #2 Frame #181===================
17-02-28 20:17:14.489 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.582 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:17:14.582 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:17:14.582 -08 000000053 INF: ===================Camera #0 Frame #186===================
17-02-28 20:17:14.617 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:17:14.617 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:17:14.617 -08 000000050 INF: ===================Camera #2 Frame #187===================
17-02-28 20:17:14.625 -08 000000037 INF: Y Motor: Unshifted Position: 2638894
17-02-28 20:17:14.675 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.752 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:17:14.752 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:17:14.752 -08 000000053 INF: ===================Camera #0 Frame #192===================
17-02-28 20:17:14.788 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:17:14.788 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:17:14.788 -08 000000050 INF: ===================Camera #2 Frame #194===================
17-02-28 20:17:14.799 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:14.922 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:17:14.922 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:17:14.922 -08 000000053 INF: ===================Camera #0 Frame #199===================
17-02-28 20:17:14.939 -08 000000037 INF: Y Motor: Unshifted Position: 2437188
17-02-28 20:17:14.962 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:17:14.962 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:17:14.962 -08 000000050 INF: ===================Camera #2 Frame #200===================
17-02-28 20:17:14.989 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.094 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:17:15.094 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:17:15.094 -08 000000053 INF: ===================Camera #0 Frame #205===================
17-02-28 20:17:15.110 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.133 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:17:15.133 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:17:15.133 -08 000000050 INF: ===================Camera #2 Frame #206===================
17-02-28 20:17:15.249 -08 000000037 INF: Y Motor: Unshifted Position: 2233087
17-02-28 20:17:15.264 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:17:15.264 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:17:15.264 -08 000000053 INF: ===================Camera #0 Frame #211===================
17-02-28 20:17:15.299 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.304 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:17:15.304 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:17:15.304 -08 000000050 INF: ===================Camera #2 Frame #213===================
17-02-28 20:17:15.426 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.434 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:17:15.434 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:17:15.434 -08 000000053 INF: ===================Camera #0 Frame #217===================
17-02-28 20:17:15.478 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:17:15.478 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:17:15.478 -08 000000050 INF: ===================Camera #2 Frame #219===================
17-02-28 20:17:15.560 -08 000000037 INF: Y Motor: Unshifted Position: 2030715
17-02-28 20:17:15.604 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:17:15.604 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:17:15.604 -08 000000053 INF: ===================Camera #0 Frame #224===================
17-02-28 20:17:15.610 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.649 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:17:15.649 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:17:15.649 -08 000000050 INF: ===================Camera #2 Frame #225===================
17-02-28 20:17:15.734 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.775 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:17:15.775 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:17:15.775 -08 000000053 INF: ===================Camera #0 Frame #230===================
17-02-28 20:17:15.820 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:17:15.820 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:17:15.820 -08 000000050 INF: ===================Camera #2 Frame #232===================
17-02-28 20:17:15.873 -08 000000037 INF: Y Motor: Unshifted Position: 1827264
17-02-28 20:17:15.923 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:15.943 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:17:15.943 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:17:15.943 -08 000000053 INF: ===================Camera #0 Frame #236===================
17-02-28 20:17:15.994 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:17:15.994 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:17:15.994 -08 000000050 INF: ===================Camera #2 Frame #238===================
17-02-28 20:17:16.047 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.113 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:17:16.113 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:17:16.113 -08 000000053 INF: ===================Camera #0 Frame #242===================
17-02-28 20:17:16.165 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:17:16.165 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:17:16.165 -08 000000050 INF: ===================Camera #2 Frame #244===================
17-02-28 20:17:16.187 -08 000000037 INF: Y Motor: Unshifted Position: 1625765
17-02-28 20:17:16.237 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.284 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:17:16.284 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:17:16.284 -08 000000053 INF: ===================Camera #0 Frame #249===================
17-02-28 20:17:16.337 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:17:16.337 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:17:16.337 -08 000000050 INF: ===================Camera #2 Frame #251===================
17-02-28 20:17:16.359 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.457 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:17:16.457 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:17:16.457 -08 000000053 INF: ===================Camera #0 Frame #255===================
17-02-28 20:17:16.499 -08 000000037 INF: Y Motor: Unshifted Position: 1421446
17-02-28 20:17:16.511 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:16.511 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:16.511 -08 000000050 INF: ===================Camera #2 Frame #257===================
17-02-28 20:17:16.549 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.627 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:17:16.627 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:17:16.627 -08 000000053 INF: ===================Camera #0 Frame #261===================
17-02-28 20:17:16.672 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.682 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:17:16.682 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:17:16.682 -08 000000050 INF: ===================Camera #2 Frame #263===================
17-02-28 20:17:16.797 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:17:16.797 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:17:16.797 -08 000000053 INF: ===================Camera #0 Frame #268===================
17-02-28 20:17:16.812 -08 000000037 INF: Y Motor: Unshifted Position: 1219722
17-02-28 20:17:16.853 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:17:16.853 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:17:16.853 -08 000000050 INF: ===================Camera #2 Frame #270===================
17-02-28 20:17:16.862 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.931 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:16.932 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:16.933 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:16.934 -08 000000064 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:16.934 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:16.934 -08 000000064 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:16.934 -08 000000064 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:16.934 -08 000000064 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:16.934 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:16.934 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:16.934 -08 000000089 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:16.934 -08 000000064 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:16.935 -08 000000089 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:16.969 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:16.969 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:16.969 -08 000000053 INF: ===================Camera #0 Frame #272===================
17-02-28 20:17:16.982 -08 000000053 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:16.983 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:16.983 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:17.122 -08 000000037 INF: Y Motor: Unshifted Position: 1014981
17-02-28 20:17:17.145 -08 000000053 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:17.145 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:17.145 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:17.145 -08 000000050 INF: ===================Camera #2 Frame #272===================
17-02-28 20:17:17.145 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:17.151 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:17.152 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:17.172 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:17.178 -08 000000053 INF: ======================================
17-02-28 20:17:17.308 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:17:17.308 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:17:17.308 -08 000000064 INF: Excitation Filter 1: Moved 107 steps in 374.0774 ms
17-02-28 20:17:17.308 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 373.9744 ms
17-02-28 20:17:17.308 -08 000000064 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 374.1808 ms
17-02-28 20:17:17.308 -08 000000064 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.323 ms
17-02-28 20:17:17.308 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 374.1105 ms
17-02-28 20:17:17.308 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.2861 ms
17-02-28 20:17:17.309 -08 000000064 INF: ======================================
17-02-28 20:17:17.309 -08 000000089 INF: ======================================
17-02-28 20:17:17.310 -08 000000037 INF: Y Motor: Unshifted Position: 982453
17-02-28 20:17:17.310 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:17.310 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:17.310 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:17.311 -08 000000047 INF: ======================================
17-02-28 20:17:17.348 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:17.348 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:17:17.372 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:17.372 -08 000000037 INF: Y Motor: Moved to 14.8245 after 7863 ms
17-02-28 20:17:17.372 -08 000000037 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:17.382 -08 000000050 INF: ======================================
17-02-28 20:17:17.383 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:17:17.385 -08 000000105 INF: ======================================
17-02-28 20:17:17.434 -08 000000037 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:17.434 -08 000000037 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:17.434 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:17.496 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:17.496 -08 000000037 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:17.496 -08 000000037 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:17.558 -08 000000037 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:17.620 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:17.684 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:17.684 -08 000000037 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:17.684 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:17.748 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:17:17.748 -08 000000037 INF: ======================================
17-02-28 20:17:17.749 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:17.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:17.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:17.751 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:17.807 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:17.808 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:17.867 -08 000000098 INF: FPGA: Recv TDIYERD 1482453
17-02-28 20:17:17.867 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:17.932 -08 000000089 INF: FPGA: Recv ZADCR 16071
17-02-28 20:17:17.932 -08 000000018 INF: At scan end Y pos = 14.825 and Z pos = -0.062. Y moved -48.539 mm
17-02-28 20:17:17.932 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:17.994 -08 000000038 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:17:17.994 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:17:17.994 -08 000000018 INF: TDIScan finished after 11829.9182 ms
17-02-28 20:17:17.994 -08 000000018 INF: Image[0]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:17.994 -08 000000018 INF: Image[2]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:17.996 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.028 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.848 um
17-02-28 20:17:18.028 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.029 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:18.056 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:18.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.057 -08 000000047 INF: ===================Dither Clean Up Command===================
17-02-28 20:17:18.057 -08 000000037 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:18.057 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:18.057 -08 000000104 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:18.057 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:18.057 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:18.057 -08 000000037 INF: ======================================
17-02-28 20:17:18.058 -08 000000104 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:18.058 -08 000000104 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:18.058 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:18.058 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:18.059 -08 000000053 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:17:18.061 -08 000000059 INF: ===================LFT:Extracting coords===================
17-02-28 20:17:18.086 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:18.086 -08 000000059 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:17:18.087 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.087 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.087 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.087 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.088 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.088 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.088 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.088 -08 000000010 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:18.118 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:18.118 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:17:18.118 -08 000000053 INF: FPGA: Xmit ZDACW 18531\n
17-02-28 20:17:18.118 -08 000000104 INF: ======================================
17-02-28 20:17:18.120 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.120 -08 000000105 INF: ======================================
17-02-28 20:17:18.164 -08 000000046 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.164 -08 000000038 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.164 -08 000000098 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.164 -08 000000010 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:18.180 -08 000000057 INF: FPGA: Recv ZDACW 
17-02-28 20:17:18.180 -08 000000053 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:17:18.181 -08 000000053 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:17:18.242 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:17:18.242 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:18.243 -08 000000053 INF: ======================================
17-02-28 20:17:18.316 -08 000000046 INF: LFT found best fwhm score 2.000174 in 152 ms
17-02-28 20:17:18.316 -08 000000046 INF: LFT found good score at index 1545 with fwhm value 2.000174. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.316 -08 000000038 INF: LFT found best fwhm score 2.000003 in 152 ms
17-02-28 20:17:18.316 -08 000000038 INF: LFT found good score at index 3725 with fwhm value 2.000003. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.316 -08 000000098 INF: LFT found best fwhm score 2.000294 in 152 ms
17-02-28 20:17:18.316 -08 000000098 INF: LFT found good score at index 5685 with fwhm value 2.000294. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.316 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000046 INF: ======================================
17-02-28 20:17:18.317 -08 000000010 INF: LFT found best fwhm score 2.000085 in 153 ms
17-02-28 20:17:18.317 -08 000000038 INF: ======================================
17-02-28 20:17:18.317 -08 000000010 INF: LFT found good score at index 265 with fwhm value 2.000085. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:1,B
17-02-28 20:17:18.317 -08 000000098 INF: ======================================
17-02-28 20:17:18.317 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:17:18.317 -08 000000010 INF: ======================================
17-02-28 20:17:18.318 -08 000000059 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:18.319 -08 000000059 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:1,B
17-02-28 20:17:18.319 -08 000000059 INF: ======================================
17-02-28 20:17:18.320 -08 000000047 INF: ======================================
17-02-28 20:17:18.321 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:18.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.322 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:17:18.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 5.567337 Y = 39.70494===================
17-02-28 20:17:18.325 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:17:18.325 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:17:18.347 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:17:18.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:18.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:18.348 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:18.348 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:17:18.349 -08 000000018 INF: Transformed XStagePosition from 6.675336 mm to 6.69707136042416 mm.
17-02-28 20:17:18.390 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":1,"Tile":2105,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF188","HCSMMF219","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.399 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4732107402533 mm.
17-02-28 20:17:18.399 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2732107402533 mm.
17-02-28 20:17:18.399 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3639607402533 mm.
17-02-28 20:17:18.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:18.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:18.404 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -70.7 um, section = A_1
17-02-28 20:17:18.407 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:18.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:18.465 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:18.472 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:18.472 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:18.472 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:18.472 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:18.473 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:18.473 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:18.473 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:18.474 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:18.478 -08 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:18.478 -08 000000078 INF: ======================================
17-02-28 20:17:18.481 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":1,"Tile":2106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF281","HCSMMF244","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.481 -08 000000081 INF: ===================Move X,Y===================
17-02-28 20:17:18.482 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:18.483 -08 000000081 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:18.483 -08 000000030 INF: ======================================
17-02-28 20:17:18.483 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:18.484 -08 000000066 INF: ======================================
17-02-28 20:17:18.486 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:18.486 -08 000000030 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:18.487 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:18.487 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:18.487 -08 000000030 INF: ======================================
17-02-28 20:17:18.487 -08 000000078 INF: ======================================
17-02-28 20:17:18.487 -08 000000066 INF: ======================================
17-02-28 20:17:18.489 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:18.489 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:18.490 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:18.490 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:18.490 -08 000000030 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:18.490 -08 000000075 INF: ======================================
17-02-28 20:17:18.490 -08 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:18.490 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:18.490 -08 000000066 INF: ======================================
17-02-28 20:17:18.491 -08 000000078 INF: ===================Move X Motor without settling===================
17-02-28 20:17:18.491 -08 000000078 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:18.492 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:18.492 -08 000000075 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:18.492 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:18.492 -08 000000075 INF: ======================================
17-02-28 20:17:18.493 -08 000000090 INF: ======================================
17-02-28 20:17:18.493 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:18.493 -08 000000047 INF: Y Motor: Moving to 64.4732 mm @25.000 mm/sec, started at 14.8245 mm
17-02-28 20:17:18.493 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:18.494 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:18.494 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:18.494 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.495 -08 000000045 INF: ======================================
17-02-28 20:17:18.495 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.495 -08 000000025 INF: ======================================
17-02-28 20:17:18.495 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:17:18.495 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:18.496 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:18.496 -08 000000075 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:18.496 -08 000000087 INF: ======================================
17-02-28 20:17:18.497 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:18.499 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:18.528 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":1,"Tile":2110,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF194","HCSMMF269","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.532 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":1,"Tile":2101,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF259","HCSMMF277","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.534 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":1,"Tile":2102,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF241","HCSMMF204","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.535 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":1,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF207","HCSMMF245","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.536 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":1,"Tile":2111,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF202","HCSMMF211","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.538 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":1,"Tile":2103,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF203","HCSMMF185","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.539 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":1,"Tile":2109,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF263","HCSMMF181","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.541 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":1,"Tile":2104,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF247","HCSMMF249","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.543 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":1,"Tile":2108,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF206","HCSMMF218","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.544 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":1,"Tile":2115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF216","HCSMMF266","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.545 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":1,"Tile":2117,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF183","HCSMMF192","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.547 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":1,"Tile":2112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF276","HCSMMF180","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.548 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":1,"Tile":2113,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF236","HCSMMF186","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.552 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":1,"Tile":2120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF189","HCSMMF231","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.570 -08 000000060 INF: FPGA: Recv ZSEL 
17-02-28 20:17:18.572 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:18.572 -08 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:18.572 -08 000000078 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:18.572 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.572 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:18.572 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:18.572 -08 000000075 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:18.586 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":1,"Tile":2114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF248","HCSMMF286","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.587 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":1,"Tile":2116,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF254","HCSMMF209","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.588 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":1,"Tile":2119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF280","HCSMMF268","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.590 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":1,"Tile":2121,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF201","HCSMMF264","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.590 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":1,"Tile":2118,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF258","HCSMMF178","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.591 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":1,"Tile":2122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF226","HCSMMF279","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.592 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":1,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF212","HCSMMF260","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.593 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":1,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF253","HCSMMF197","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.594 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":1,"Tile":2125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF284","HCSMMF177","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.596 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":1,"Tile":2128,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF213","HCSMMF191","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.597 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":1,"Tile":2124,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF283","HCSMMF221","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.599 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":1,"Tile":2126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF215","HCSMMF255","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:18.619 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.625 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:17:18.632 -08 000000090 INF: FPGA: Recv TDIBB
17-02-28 20:17:18.632 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:18.633 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:18.634 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.634 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:18.634 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Moving to 6.6971 mm @15.000 mm/sec, started at 5.6016 mm
17-02-28 20:17:18.635 -08 000000078 INF: X Motor: Xmit MA -21423\n
17-02-28 20:17:18.635 -08 000000075 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:18.636 -08 000000075 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:18.636 -08 000000075 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:18.694 -08 000000082 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:18.694 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.696 -08 000000078 INF: X Motor: Recv MA -21423\r\n>
17-02-28 20:17:18.696 -08 000000078 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:17:18.696 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:18.696 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Set target position to 5947321 encoder counts
17-02-28 20:17:18.697 -08 000000047 INF: Y Motor: Xmit s r0xca 5947321\r
17-02-28 20:17:18.698 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:18.698 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:18.698 -08 000000075 INF: Z Motor: Arming to move to -0.0307 mm
17-02-28 20:17:18.698 -08 000000075 INF: FPGA: Xmit ZYT 6427321 4\n
17-02-28 20:17:18.706 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.706 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:17:18.743 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.749 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:17:18.756 -08 000000086 INF: FPGA: Recv ZYT 
17-02-28 20:17:18.756 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482453 enc / 14.825 mm / ) = 6427321 enc / 64.273 mm
17-02-28 20:17:18.756 -08 000000075 INF: FPGA: Xmit ZARM 8045\n
17-02-28 20:17:18.758 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.758 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:17:18.758 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:18.821 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:17:18.821 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9008 ms
17-02-28 20:17:18.821 -08 000000075 INF: Z Motor: ArmAbsStepped took 122.62 ms
17-02-28 20:17:18.821 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:18.823 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:18.823 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.823 -08 000000047 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:17:18.823 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:18.824 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:18.825 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.826 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:18.827 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:17:18.828 -08 000000075 INF: ======================================
17-02-28 20:17:18.839 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.845 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:17:18.943 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:18.947 -08 000000047 INF: Y Motor: Unshifted Position: 1069096
17-02-28 20:17:18.949 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:17:18.997 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.061 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:19.102 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:19.102 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:19.102 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:19.117 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:19.119 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:19.122 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.260 -08 000000047 INF: Y Motor: Unshifted Position: 1772457
17-02-28 20:17:19.310 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.321 -08 000000078 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:19.344 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:17:19.385 -08 000000078 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:19.385 -08 000000078 INF: X Motor: Moved to 6.6978 after 689 ms
17-02-28 20:17:19.385 -08 000000078 INF: ======================================
17-02-28 20:17:19.433 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.572 -08 000000047 INF: Y Motor: Unshifted Position: 2552470
17-02-28 20:17:19.622 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.715 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:19.715 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:19.716 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:19.730 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:19.732 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:17:19.733 -08 000000101 INF: ======================================
17-02-28 20:17:19.734 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:19.735 -08 000000030 INF: ======================================
17-02-28 20:17:19.746 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:19.884 -08 000000047 INF: Y Motor: Unshifted Position: 3335744
17-02-28 20:17:19.934 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.057 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.195 -08 000000047 INF: Y Motor: Unshifted Position: 4118330
17-02-28 20:17:20.245 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.369 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.511 -08 000000047 INF: Y Motor: Unshifted Position: 4894089
17-02-28 20:17:20.561 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.682 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.818 -08 000000047 INF: Y Motor: Unshifted Position: 5675004
17-02-28 20:17:20.868 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:20.992 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:21.133 -08 000000047 INF: Y Motor: Unshifted Position: 5947322
17-02-28 20:17:21.133 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:21.133 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:21.193 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:21.193 -08 000000047 INF: Y Motor: Moved to 64.4732 after 2370 ms
17-02-28 20:17:21.193 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:21.255 -08 000000047 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:21.255 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:21.255 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:21.318 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:21.318 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:21.318 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:21.381 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:21.444 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:21.506 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:21.506 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:21.506 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:21.568 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:17:21.568 -08 000000047 INF: ======================================
17-02-28 20:17:21.569 -08 000000081 INF: ===================Move X,Y===================
17-02-28 20:17:21.570 -08 000000081 INF: ======================================
17-02-28 20:17:21.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:21.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:21.572 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:21.572 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:21.630 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:21.630 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:21.690 -08 000000081 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:21.691 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:21.691 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:21.691 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:21.752 -08 000000051 INF: FPGA: Recv TDIYERD 6447323
17-02-28 20:17:21.752 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447323 counts (64.473 mm)
17-02-28 20:17:21.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:21.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:21.754 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:21.754 -08 000000033 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:21.754 -08 000000033 INF: ======================================
17-02-28 20:17:21.754 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:21.755 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:21.755 -08 000000053 INF: FPGA: Xmit TDIYPOS 6336396\n
17-02-28 20:17:21.814 -08 000000064 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:21.814 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:21.816 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:21.816 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6427321 1 1\n
17-02-28 20:17:21.876 -08 000000101 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:21.876 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:21.878 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:21.879 -08 000000053 INF: ======================================
17-02-28 20:17:21.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:21.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:21.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:21.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:21.882 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:21.882 -08 000000082 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:21.883 -08 000000082 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:21.883 -08 000000082 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:21.883 -08 000000082 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:21.883 -08 000000078 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:21.883 -08 000000082 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:21.883 -08 000000078 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:21.883 -08 000000078 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:21.883 -08 000000078 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:21.884 -08 000000078 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:22.251 -08 000000060 INF: FPGA: Recv EX2MV
17-02-28 20:17:22.251 -08 000000082 INF: Excitation Filter 2: Moved -107 steps in 368.2524 ms
17-02-28 20:17:22.251 -08 000000082 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4642 ms
17-02-28 20:17:22.251 -08 000000082 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.5662 ms
17-02-28 20:17:22.252 -08 000000082 INF: ======================================
17-02-28 20:17:22.313 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:17:22.313 -08 000000078 INF: Excitation Filter 1: Moved -107 steps in 429.9679 ms
17-02-28 20:17:22.313 -08 000000078 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.1199 ms
17-02-28 20:17:22.313 -08 000000078 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 430.1971 ms
17-02-28 20:17:22.313 -08 000000078 INF: ======================================
17-02-28 20:17:22.315 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:22.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:22.317 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:17:22.317 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:22.317 -08 000000077 INF: ===================FPGA Z Wait===================
17-02-28 20:17:22.317 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:22.317 -08 000000077 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:22.317 -08 000000058 INF: Y Motor: Moving to 14.8249 mm @6.500 mm/sec, started at 64.4732 mm
17-02-28 20:17:22.317 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:22.317 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:22.317 -08 000000087 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:22.317 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:22.318 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:22.318 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:17:22.319 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:22.320 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.320 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.321 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.321 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.380 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.380 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:22.380 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:22.442 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.442 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:22.470 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.470 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.471 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.471 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Set target position to 982487 encoder counts
17-02-28 20:17:22.504 -08 000000058 INF: Y Motor: Xmit s r0xca 982487\r
17-02-28 20:17:22.566 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.566 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:17:22.566 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:22.620 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.620 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.621 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:22.621 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:22.630 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:22.630 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:22.630 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:22.688 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:22.688 -08 000000077 INF: ======================================
17-02-28 20:17:22.752 -08 000000058 INF: Y Motor: Unshifted Position: 5885464
17-02-28 20:17:22.770 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:22.770 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:22.770 -08 000000025 INF: ===================Camera #2 Frame #4===================
17-02-28 20:17:22.771 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:22.771 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:22.771 -08 000000060 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:22.802 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:22.929 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:22.940 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:22.940 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:22.940 -08 000000025 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:22.943 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:22.943 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:22.943 -08 000000060 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:23.065 -08 000000058 INF: Y Motor: Unshifted Position: 5682018
17-02-28 20:17:23.111 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:23.111 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:23.111 -08 000000060 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:23.115 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.123 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:23.123 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:23.123 -08 000000025 INF: ===================Camera #2 Frame #17===================
17-02-28 20:17:23.239 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.283 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:23.283 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:23.283 -08 000000060 INF: ===================Camera #0 Frame #23===================
17-02-28 20:17:23.301 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:17:23.301 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:17:23.301 -08 000000025 INF: ===================Camera #2 Frame #24===================
17-02-28 20:17:23.376 -08 000000058 INF: Y Motor: Unshifted Position: 5480311
17-02-28 20:17:23.426 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.457 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:23.457 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:23.457 -08 000000060 INF: ===================Camera #0 Frame #30===================
17-02-28 20:17:23.473 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:23.473 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:23.473 -08 000000025 INF: ===================Camera #2 Frame #30===================
17-02-28 20:17:23.553 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.629 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:23.629 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:23.629 -08 000000060 INF: ===================Camera #0 Frame #36===================
17-02-28 20:17:23.652 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:17:23.652 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:17:23.652 -08 000000025 INF: ===================Camera #2 Frame #37===================
17-02-28 20:17:23.689 -08 000000058 INF: Y Motor: Unshifted Position: 5276204
17-02-28 20:17:23.739 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.797 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:23.797 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:23.797 -08 000000060 INF: ===================Camera #0 Frame #42===================
17-02-28 20:17:23.824 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:17:23.824 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:17:23.824 -08 000000025 INF: ===================Camera #2 Frame #43===================
17-02-28 20:17:23.863 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:23.973 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:17:23.973 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:17:23.973 -08 000000060 INF: ===================Camera #0 Frame #49===================
17-02-28 20:17:23.993 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:17:23.993 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:17:23.993 -08 000000025 INF: ===================Camera #2 Frame #50===================
17-02-28 20:17:24.002 -08 000000058 INF: Y Motor: Unshifted Position: 5074701
17-02-28 20:17:24.052 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.150 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:17:24.150 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:17:24.150 -08 000000060 INF: ===================Camera #0 Frame #55===================
17-02-28 20:17:24.171 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:17:24.171 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:17:24.171 -08 000000025 INF: ===================Camera #2 Frame #56===================
17-02-28 20:17:24.176 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.312 -08 000000058 INF: Y Motor: Unshifted Position: 4871039
17-02-28 20:17:24.328 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:17:24.328 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:17:24.328 -08 000000060 INF: ===================Camera #0 Frame #62===================
17-02-28 20:17:24.349 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:17:24.349 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:17:24.349 -08 000000025 INF: ===================Camera #2 Frame #63===================
17-02-28 20:17:24.362 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.489 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.510 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:24.510 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:24.510 -08 000000060 INF: ===================Camera #0 Frame #69===================
17-02-28 20:17:24.532 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:24.532 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:24.532 -08 000000025 INF: ===================Camera #2 Frame #69===================
17-02-28 20:17:24.625 -08 000000058 INF: Y Motor: Unshifted Position: 4667586
17-02-28 20:17:24.675 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.682 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:17:24.682 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:17:24.682 -08 000000060 INF: ===================Camera #0 Frame #75===================
17-02-28 20:17:24.703 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:17:24.703 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:17:24.703 -08 000000025 INF: ===================Camera #2 Frame #76===================
17-02-28 20:17:24.799 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:24.850 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:17:24.850 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:17:24.850 -08 000000060 INF: ===================Camera #0 Frame #81===================
17-02-28 20:17:24.876 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:17:24.876 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:17:24.877 -08 000000025 INF: ===================Camera #2 Frame #82===================
17-02-28 20:17:24.938 -08 000000058 INF: Y Motor: Unshifted Position: 4465856
17-02-28 20:17:24.988 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.019 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:17:25.019 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:17:25.019 -08 000000060 INF: ===================Camera #0 Frame #87===================
17-02-28 20:17:25.050 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:17:25.050 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:17:25.050 -08 000000025 INF: ===================Camera #2 Frame #88===================
17-02-28 20:17:25.112 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.188 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:17:25.188 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:17:25.188 -08 000000060 INF: ===================Camera #0 Frame #94===================
17-02-28 20:17:25.221 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:17:25.221 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:17:25.221 -08 000000025 INF: ===================Camera #2 Frame #95===================
17-02-28 20:17:25.248 -08 000000058 INF: Y Motor: Unshifted Position: 4262197
17-02-28 20:17:25.298 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.360 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:17:25.360 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:17:25.360 -08 000000060 INF: ===================Camera #0 Frame #100===================
17-02-28 20:17:25.394 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:17:25.394 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:17:25.394 -08 000000025 INF: ===================Camera #2 Frame #101===================
17-02-28 20:17:25.425 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.529 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:17:25.529 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:17:25.529 -08 000000060 INF: ===================Camera #0 Frame #106===================
17-02-28 20:17:25.562 -08 000000058 INF: Y Motor: Unshifted Position: 4059817
17-02-28 20:17:25.564 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:17:25.564 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:17:25.564 -08 000000025 INF: ===================Camera #2 Frame #107===================
17-02-28 20:17:25.612 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.698 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:17:25.698 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:17:25.698 -08 000000060 INF: ===================Camera #0 Frame #112===================
17-02-28 20:17:25.733 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:17:25.733 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:17:25.733 -08 000000025 INF: ===================Camera #2 Frame #114===================
17-02-28 20:17:25.736 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:25.868 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:17:25.868 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:17:25.868 -08 000000060 INF: ===================Camera #0 Frame #119===================
17-02-28 20:17:25.873 -08 000000058 INF: Y Motor: Unshifted Position: 3856374
17-02-28 20:17:25.907 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:17:25.907 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:17:25.907 -08 000000025 INF: ===================Camera #2 Frame #120===================
17-02-28 20:17:25.923 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.041 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:17:26.041 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:17:26.041 -08 000000060 INF: ===================Camera #0 Frame #125===================
17-02-28 20:17:26.049 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.076 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:17:26.076 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:17:26.076 -08 000000025 INF: ===================Camera #2 Frame #126===================
17-02-28 20:17:26.186 -08 000000058 INF: Y Motor: Unshifted Position: 3652922
17-02-28 20:17:26.212 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:17:26.212 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:17:26.212 -08 000000060 INF: ===================Camera #0 Frame #131===================
17-02-28 20:17:26.236 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.246 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:17:26.246 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:17:26.246 -08 000000025 INF: ===================Camera #2 Frame #132===================
17-02-28 20:17:26.360 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.383 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:17:26.383 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:17:26.383 -08 000000060 INF: ===================Camera #0 Frame #137===================
17-02-28 20:17:26.415 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:17:26.415 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:17:26.415 -08 000000025 INF: ===================Camera #2 Frame #139===================
17-02-28 20:17:26.499 -08 000000058 INF: Y Motor: Unshifted Position: 3451414
17-02-28 20:17:26.529 -08 000000036 INF: RunCopyService queue size at 2/28/2017 8:17:26 PM is 14
17-02-28 20:17:26.549 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.554 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:17:26.554 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:17:26.554 -08 000000060 INF: ===================Camera #0 Frame #144===================
17-02-28 20:17:26.587 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:17:26.587 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:17:26.587 -08 000000025 INF: ===================Camera #2 Frame #145===================
17-02-28 20:17:26.671 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.725 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:17:26.725 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:17:26.725 -08 000000060 INF: ===================Camera #0 Frame #150===================
17-02-28 20:17:26.756 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:17:26.756 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:17:26.756 -08 000000025 INF: ===================Camera #2 Frame #151===================
17-02-28 20:17:26.812 -08 000000058 INF: Y Motor: Unshifted Position: 3247108
17-02-28 20:17:26.862 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:26.893 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:17:26.893 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:17:26.893 -08 000000060 INF: ===================Camera #0 Frame #156===================
17-02-28 20:17:26.925 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:17:26.925 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:17:26.925 -08 000000025 INF: ===================Camera #2 Frame #157===================
17-02-28 20:17:26.984 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.061 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:17:27.061 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:17:27.061 -08 000000060 INF: ===================Camera #0 Frame #162===================
17-02-28 20:17:27.094 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:17:27.094 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:17:27.094 -08 000000025 INF: ===================Camera #2 Frame #164===================
17-02-28 20:17:27.123 -08 000000058 INF: Y Motor: Unshifted Position: 3045397
17-02-28 20:17:27.173 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.229 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:17:27.229 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:17:27.229 -08 000000060 INF: ===================Camera #0 Frame #169===================
17-02-28 20:17:27.266 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:17:27.266 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:17:27.266 -08 000000025 INF: ===================Camera #2 Frame #170===================
17-02-28 20:17:27.297 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.400 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:17:27.400 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:17:27.400 -08 000000060 INF: ===================Camera #0 Frame #175===================
17-02-28 20:17:27.434 -08 000000058 INF: Y Motor: Unshifted Position: 2841947
17-02-28 20:17:27.435 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:17:27.435 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:17:27.435 -08 000000025 INF: ===================Camera #2 Frame #176===================
17-02-28 20:17:27.484 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.568 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:17:27.568 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:17:27.568 -08 000000060 INF: ===================Camera #0 Frame #181===================
17-02-28 20:17:27.604 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:17:27.604 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:17:27.604 -08 000000025 INF: ===================Camera #2 Frame #182===================
17-02-28 20:17:27.608 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.736 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:17:27.736 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:17:27.736 -08 000000060 INF: ===================Camera #0 Frame #187===================
17-02-28 20:17:27.747 -08 000000058 INF: Y Motor: Unshifted Position: 2639576
17-02-28 20:17:27.773 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:17:27.773 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:17:27.773 -08 000000025 INF: ===================Camera #2 Frame #189===================
17-02-28 20:17:27.797 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.904 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:17:27.904 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:17:27.904 -08 000000060 INF: ===================Camera #0 Frame #193===================
17-02-28 20:17:27.921 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:27.945 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:17:27.945 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:17:27.945 -08 000000025 INF: ===================Camera #2 Frame #195===================
17-02-28 20:17:28.057 -08 000000058 INF: Y Motor: Unshifted Position: 2434619
17-02-28 20:17:28.074 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:17:28.074 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:17:28.074 -08 000000060 INF: ===================Camera #0 Frame #200===================
17-02-28 20:17:28.107 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.114 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:17:28.114 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:17:28.114 -08 000000025 INF: ===================Camera #2 Frame #201===================
17-02-28 20:17:28.231 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.248 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:17:28.248 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:17:28.248 -08 000000060 INF: ===================Camera #0 Frame #206===================
17-02-28 20:17:28.283 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:17:28.283 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:17:28.283 -08 000000025 INF: ===================Camera #2 Frame #207===================
17-02-28 20:17:28.370 -08 000000058 INF: Y Motor: Unshifted Position: 2232472
17-02-28 20:17:28.418 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:17:28.418 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:17:28.418 -08 000000060 INF: ===================Camera #0 Frame #212===================
17-02-28 20:17:28.420 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.452 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:17:28.452 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:17:28.452 -08 000000025 INF: ===================Camera #2 Frame #214===================
17-02-28 20:17:28.544 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.588 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:17:28.588 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:17:28.588 -08 000000060 INF: ===================Camera #0 Frame #219===================
17-02-28 20:17:28.624 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:17:28.624 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:17:28.624 -08 000000025 INF: ===================Camera #2 Frame #220===================
17-02-28 20:17:28.683 -08 000000058 INF: Y Motor: Unshifted Position: 2030964
17-02-28 20:17:28.733 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.762 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:17:28.762 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:17:28.762 -08 000000060 INF: ===================Camera #0 Frame #225===================
17-02-28 20:17:28.793 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:17:28.793 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:17:28.793 -08 000000025 INF: ===================Camera #2 Frame #226===================
17-02-28 20:17:28.857 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:28.932 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:17:28.932 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:17:28.932 -08 000000060 INF: ===================Camera #0 Frame #231===================
17-02-28 20:17:28.962 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:17:28.962 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:17:28.962 -08 000000025 INF: ===================Camera #2 Frame #232===================
17-02-28 20:17:28.993 -08 000000058 INF: Y Motor: Unshifted Position: 1827301
17-02-28 20:17:29.043 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.102 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:17:29.102 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:17:29.102 -08 000000060 INF: ===================Camera #0 Frame #238===================
17-02-28 20:17:29.131 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:17:29.131 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:17:29.131 -08 000000025 INF: ===================Camera #2 Frame #239===================
17-02-28 20:17:29.167 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.276 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:17:29.276 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:17:29.276 -08 000000060 INF: ===================Camera #0 Frame #244===================
17-02-28 20:17:29.303 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:17:29.303 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:17:29.303 -08 000000025 INF: ===================Camera #2 Frame #245===================
17-02-28 20:17:29.306 -08 000000058 INF: Y Motor: Unshifted Position: 1623627
17-02-28 20:17:29.356 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.447 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:17:29.447 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:17:29.447 -08 000000060 INF: ===================Camera #0 Frame #250===================
17-02-28 20:17:29.472 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:17:29.472 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:17:29.472 -08 000000025 INF: ===================Camera #2 Frame #251===================
17-02-28 20:17:29.480 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.617 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:29.617 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:29.617 -08 000000060 INF: ===================Camera #0 Frame #257===================
17-02-28 20:17:29.619 -08 000000058 INF: Y Motor: Unshifted Position: 1422132
17-02-28 20:17:29.641 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:29.641 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:29.641 -08 000000025 INF: ===================Camera #2 Frame #257===================
17-02-28 20:17:29.669 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.791 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:17:29.791 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:17:29.791 -08 000000060 INF: ===================Camera #0 Frame #263===================
17-02-28 20:17:29.793 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.812 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:17:29.812 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:17:29.812 -08 000000025 INF: ===================Camera #2 Frame #264===================
17-02-28 20:17:29.929 -08 000000058 INF: Y Motor: Unshifted Position: 1218457
17-02-28 20:17:29.961 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:17:29.961 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:17:29.961 -08 000000060 INF: ===================Camera #0 Frame #269===================
17-02-28 20:17:29.979 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:29.986 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:17:29.986 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:17:29.986 -08 000000025 INF: ===================Camera #2 Frame #270===================
17-02-28 20:17:30.051 -08 000000034 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:30.052 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:30.053 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:30.054 -08 000000105 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:30.054 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:30.054 -08 000000105 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:30.054 -08 000000105 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:30.054 -08 000000105 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:30.054 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:30.054 -08 000000105 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:30.054 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:30.054 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:30.057 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:30.103 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:30.131 -08 000000060 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:30.131 -08 000000060 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:30.131 -08 000000060 INF: ===================Camera #0 Frame #272===================
17-02-28 20:17:30.141 -08 000000060 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:30.142 -08 000000060 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:30.242 -08 000000058 INF: Y Motor: Unshifted Position: 1015010
17-02-28 20:17:30.274 -08 000000060 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:30.274 -08 000000025 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:30.274 -08 000000025 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:30.274 -08 000000025 INF: ===================Camera #2 Frame #272===================
17-02-28 20:17:30.274 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:30.280 -08 000000025 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:30.281 -08 000000025 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:30.292 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:30.306 -08 000000060 INF: ======================================
17-02-28 20:17:30.426 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:17:30.426 -08 000000081 INF: FPGA: Recv EX1MV
17-02-28 20:17:30.426 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 371.5334 ms
17-02-28 20:17:30.426 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6717 ms
17-02-28 20:17:30.426 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.7443 ms
17-02-28 20:17:30.426 -08 000000105 INF: Excitation Filter 2: Moved 107 steps in 371.7455 ms
17-02-28 20:17:30.426 -08 000000105 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.953 ms
17-02-28 20:17:30.426 -08 000000105 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0238 ms
17-02-28 20:17:30.426 -08 000000077 INF: ======================================
17-02-28 20:17:30.426 -08 000000105 INF: ======================================
17-02-28 20:17:30.428 -08 000000058 INF: Y Motor: Unshifted Position: 982486
17-02-28 20:17:30.428 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:30.428 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:30.428 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:30.429 -08 000000045 INF: ======================================
17-02-28 20:17:30.446 -08 000000025 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:30.446 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:17:30.480 -08 000000025 INF: ======================================
17-02-28 20:17:30.481 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:17:30.482 -08 000000087 INF: ======================================
17-02-28 20:17:30.490 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:30.490 -08 000000058 INF: Y Motor: Moved to 14.8249 after 7859 ms
17-02-28 20:17:30.490 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:30.552 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:30.552 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:30.552 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:30.618 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:30.618 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:30.618 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:30.678 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:30.742 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:30.806 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:30.806 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:30.806 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:30.866 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:17:30.866 -08 000000058 INF: ======================================
17-02-28 20:17:30.867 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:30.868 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:30.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:30.869 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:30.926 -08 000000105 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:30.926 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:30.988 -08 000000064 INF: FPGA: Recv TDIYERD 1482488
17-02-28 20:17:30.988 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:31.051 -08 000000053 INF: FPGA: Recv ZADCR 15809
17-02-28 20:17:31.051 -08 000000018 INF: At scan end Y pos = 14.825 and Z pos = -0.061. Y moved -48.539 mm
17-02-28 20:17:31.051 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:31.112 -08 000000073 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:17:31.112 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:17:31.112 -08 000000018 INF: TDIScan finished after 12762.923 ms
17-02-28 20:17:31.112 -08 000000018 INF: Image[0]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:31.112 -08 000000018 INF: Image[2]: Y should trigger at 63.364 mm, 2nd row was at 64.273 mm (error = 0.909 mm)
17-02-28 20:17:31.114 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.148 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.973 um
17-02-28 20:17:31.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.149 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:31.175 -08 000000101 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:31.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.176 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:17:31.176 -08 000000052 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:31.176 -08 000000086 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:31.176 -08 000000035 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:31.176 -08 000000035 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:31.177 -08 000000052 INF: ======================================
17-02-28 20:17:31.177 -08 000000035 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:31.177 -08 000000086 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:31.177 -08 000000086 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:31.177 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:31.177 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:31.180 -08 000000039 INF: ===================LFT:Extracting coords===================
17-02-28 20:17:31.181 -08 000000038 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:17:31.204 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:31.205 -08 000000039 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:17:31.206 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.206 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.206 -08 000000073 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.207 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.207 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:31.240 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:31.240 -08 000000089 INF: FPGA: Recv ZSEL 
17-02-28 20:17:31.240 -08 000000038 INF: FPGA: Xmit ZDACW 18531\n
17-02-28 20:17:31.240 -08 000000035 INF: ======================================
17-02-28 20:17:31.242 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:17:31.242 -08 000000086 INF: ======================================
17-02-28 20:17:31.281 -08 000000050 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.281 -08 000000073 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.281 -08 000000108 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.282 -08 000000087 INF: FC:A, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:31.301 -08 000000051 INF: FPGA: Recv ZDACW 
17-02-28 20:17:31.302 -08 000000038 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:17:31.302 -08 000000038 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:17:31.364 -08 000000069 INF: FPGA: Recv TDIBB
17-02-28 20:17:31.364 -08 000000038 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:31.365 -08 000000038 INF: ======================================
17-02-28 20:17:31.432 -08 000000050 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:17:31.432 -08 000000073 INF: LFT found best fwhm score 2.000589 in 151 ms
17-02-28 20:17:31.432 -08 000000073 INF: LFT found good score at index 4069 with fwhm value 2.000589. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:1,B
17-02-28 20:17:31.432 -08 000000050 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0492494282318682 in the next cycle, cycle 4 FC:A, C:3,L:1,B
17-02-28 20:17:31.432 -08 000000108 INF: LFT found best fwhm score 2.000027 in 151 ms
17-02-28 20:17:31.432 -08 000000108 INF: LFT found good score at index 8429 with fwhm value 2.000027. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:1,B
17-02-28 20:17:31.432 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.432 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.433 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.433 -08 000000073 INF: ======================================
17-02-28 20:17:31.433 -08 000000050 INF: ======================================
17-02-28 20:17:31.433 -08 000000108 INF: ======================================
17-02-28 20:17:31.434 -08 000000087 INF: LFT found best fwhm score 2.000244 in 152 ms
17-02-28 20:17:31.434 -08 000000087 INF: LFT found good score at index 3901 with fwhm value 2.000244. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:1,B
17-02-28 20:17:31.434 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:17:31.435 -08 000000087 INF: ======================================
17-02-28 20:17:31.436 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:31.437 -08 000000039 INF: LFT weighted average best Z for bottom surface is at -0.048mm FC:A, C:3,L:1,B
17-02-28 20:17:31.437 -08 000000039 INF: ======================================
17-02-28 20:17:31.438 -08 000000058 INF: ======================================
17-02-28 20:17:31.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:31.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:31.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:17:31.442 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 6.675336 Y = 39.70494===================
17-02-28 20:17:31.443 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:17:31.443 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:17:31.465 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:17:31.465 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:31.465 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.465 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:31.466 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:17:31.466 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:17:31.467 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:17:31.483 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.523 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":1,"Tile":2203,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF250","HCSMMF246","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.547 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:31.548 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:31.585 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":1,"Tile":2201,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF242","HCSMMF239","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.603 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":1,"Tile":2204,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF193","HCSMMF191","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.615 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":1,"Tile":2212,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF244","HCSMMF243","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.616 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:31.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.617 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:17:31.618 -08 000000018 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:17:31.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:31.621 -08 000000050 INF: ===================Move Tilt Motor 1===================
17-02-28 20:17:31.622 -08 000000050 INF: Tilt Motor 1: Moving to 5.1786 mm, started at 5.1798 mm, delta = -0.0013 mm
17-02-28 20:17:31.622 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.623 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:17:31.624 -08 000000064 INF: Tilt Motor 2: Moving to 5.2431 mm, started at 5.2443 mm, delta = -0.0013 mm
17-02-28 20:17:31.624 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:31.624 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:17:31.625 -08 000000087 INF: Tilt Motor 3: Moving to 5.2710 mm, started at 5.2695 mm, delta = 0.0015 mm
17-02-28 20:17:31.625 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.716 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":1,"Tile":2205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF213","HCSMMF198","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.716 -08 000000030 INF: FPGA: Recv T1RD 20391
17-02-28 20:17:31.716 -08 000000030 INF: FPGA: Recv T2RD 20647
17-02-28 20:17:31.716 -08 000000030 INF: FPGA: Recv T3RD 20746
17-02-28 20:17:31.717 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3457 + 4/6
17-02-28 20:17:31.717 -08 000000087 INF: Tilt Motor 3: Moving to 20752 encoder counts
17-02-28 20:17:31.717 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3441 + 1/6
17-02-28 20:17:31.717 -08 000000064 INF: Tilt Motor 2: Moving to 20642 encoder counts
17-02-28 20:17:31.717 -08 000000087 INF: FPGA: Xmit T3MOVETO 20752\n
17-02-28 20:17:31.718 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 3/6
17-02-28 20:17:31.718 -08 000000064 INF: FPGA: Xmit T2MOVETO 20642\n
17-02-28 20:17:31.718 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":1,"Tile":2202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF234","HCSMMF177","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.718 -08 000000050 INF: Tilt Motor 1: Moving to 20388 encoder counts
17-02-28 20:17:31.719 -08 000000050 INF: FPGA: Xmit T1MOVETO 20388\n
17-02-28 20:17:31.719 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":1,"Tile":2213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF182","HCSMMF261","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.724 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":1,"Tile":2208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF268","HCSMMF226","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.726 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":1,"Tile":2210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF265","HCSMMF229","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.727 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":1,"Tile":2209,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF280","HCSMMF231","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.729 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":1,"Tile":2206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF228","HCSMMF220","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.729 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":1,"Tile":2211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF278","HCSMMF273","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.730 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":1,"Tile":2215,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF189","HCSMMF192","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.731 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":1,"Tile":2217,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF282","HCSMMF269","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.732 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":1,"Tile":2218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF190","HCSMMF260","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.733 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":1,"Tile":2216,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF176","HCSMMF218","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.734 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":1,"Tile":2219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF194","HCSMMF233","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.735 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":1,"Tile":2223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF285","HCSMMF208","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.736 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":1,"Tile":2221,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF204","HCSMMF236","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.737 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":1,"Tile":2207,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF181","HCSMMF203","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.738 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":1,"Tile":2220,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF230","HCSMMF258","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.740 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":1,"Tile":2214,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF287","HCSMMF281","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.741 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":1,"Tile":2222,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF186","HCSMMF274","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.744 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":1,"Tile":2224,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF275","HCSMMF257","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.745 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":1,"Tile":2226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF184","HCSMMF277","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.747 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":1,"Tile":2225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF187","HCSMMF188","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.748 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":1,"Tile":2227,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF259","HCSMMF214","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.756 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":1,"Tile":2228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF201","HCSMMF237","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:31.759 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.765 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:17:31.831 -08 000000075 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:17:31.831 -08 000000075 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:17:31.831 -08 000000075 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:17:31.831 -08 000000050 INF: Tilt Motor 1: To move from 5.179 to 5.179 (-0.001 mm) should take 0 steps, but required 1 steps (0.002 mm). Slippage = 0.002 mm (-1.20%)
17-02-28 20:17:31.831 -08 000000087 INF: Tilt Motor 3: To move from 5.269 to 5.271 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:17:31.831 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.831 -08 000000064 INF: Tilt Motor 2: To move from 5.244 to 5.243 (-0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:17:31.832 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.834 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:31.868 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.868 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:17:31.893 -08 000000036 INF: FPGA: Recv T1RD 20389
17-02-28 20:17:31.893 -08 000000036 INF: FPGA: Recv T3RD 20751
17-02-28 20:17:31.893 -08 000000036 INF: FPGA: Recv T2RD 20642
17-02-28 20:17:31.893 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:17:31.893 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:31.894 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:17:31.894 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 3/6
17-02-28 20:17:31.895 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.896 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.909 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:31.914 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:17:31.955 -08 000000085 INF: FPGA: Recv T2RD 20642
17-02-28 20:17:31.955 -08 000000085 INF: FPGA: Recv T3RD 20751
17-02-28 20:17:31.955 -08 000000085 INF: FPGA: Recv T1RD 20389
17-02-28 20:17:31.955 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:17:31.955 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 3/6
17-02-28 20:17:31.955 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:17:31.955 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:17:31.956 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:17:31.958 -08 000000064 INF: FPGA: Xmit T2RD\n
17-02-28 20:17:32.012 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:32.017 -08 000000105 INF: FPGA: Recv T1RD 20389
17-02-28 20:17:32.017 -08 000000105 INF: FPGA: Recv T3RD 20751
17-02-28 20:17:32.017 -08 000000105 INF: FPGA: Recv T2RD 20642
17-02-28 20:17:32.017 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3458 + 3/6
17-02-28 20:17:32.017 -08 000000087 INF: Tilt Motor 3: After move to 5.2710, error = -0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.017 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3398 + 1/6
17-02-28 20:17:32.017 -08 000000087 INF: Tilt Motor 3: Moved to 5.2708 after 392.5557 ms
17-02-28 20:17:32.017 -08 000000050 INF: Tilt Motor 1: After move to 5.1786, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.017 -08 000000064 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:17:32.017 -08 000000064 INF: Tilt Motor 2: After move to 5.2431, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.017 -08 000000050 INF: Tilt Motor 1: Moved to 5.1788 after 395.7515 ms
17-02-28 20:17:32.017 -08 000000064 INF: Tilt Motor 2: Moved to 5.2431 after 393.6313 ms
17-02-28 20:17:32.018 -08 000000087 INF: ======================================
17-02-28 20:17:32.018 -08 000000064 INF: ======================================
17-02-28 20:17:32.018 -08 000000050 INF: ======================================
17-02-28 20:17:32.018 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:17:32.019 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:32.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:32.026 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:17:32.035 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:17:32.035 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:17:32.035 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:17:32.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.036 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.039 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:17:32.039 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:17:32.039 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:17:32.079 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:32.079 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.080 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:32.080 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0707 mm
17-02-28 20:17:32.080 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:17:32.112 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:32.118 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:17:32.144 -08 000000057 INF: FPGA: Recv ZTRG 
17-02-28 20:17:32.144 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:17:32.202 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:32.206 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:17:32.206 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:17:32.206 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:17:32.268 -08 000000090 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:17:32.268 -08 000000090 INF: FPGA: Recv ZMV 
17-02-28 20:17:32.268 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:17:32.268 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0678 ms
17-02-28 20:17:32.268 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:17:32.330 -08 000000077 INF: FPGA: Recv ZDACR 60292
17-02-28 20:17:32.330 -08 000000018 INF: Z Motor: MoveAndTrigger took 250.3196 ms w/comms
17-02-28 20:17:32.330 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:32.330 -08 000000018 INF: Z Motor: MoveAbsStepped took 250.5173 ms
17-02-28 20:17:32.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.331 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.340 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:17:32.340 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:17:32.394 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:32.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:32.415 -08 000000018 INF: Transformed XStagePosition from 8.903931 mm to 8.9039306640625 mm.
17-02-28 20:17:32.424 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:17:32.424 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.424 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:17:32.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:32.426 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:32.427 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:32.427 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-02-28 20:17:32.427 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:32.428 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:32.429 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:32.429 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:17:32.429 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:32.429 -08 000000077 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:32.430 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:32.430 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:32.430 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:32.430 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:32.430 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:32.431 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:32.431 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:32.431 -08 000000050 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:32.431 -08 000000075 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:32.431 -08 000000050 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:32.431 -08 000000109 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:32.432 -08 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:32.432 -08 000000087 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:32.432 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:32.432 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:32.432 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:32.432 -08 000000075 INF: ======================================
17-02-28 20:17:32.432 -08 000000030 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8249 mm
17-02-28 20:17:32.432 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:32.432 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:32.432 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:32.432 -08 000000064 INF: ===================Move X Motor without settling===================
17-02-28 20:17:32.432 -08 000000086 INF: ======================================
17-02-28 20:17:32.432 -08 000000064 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:32.432 -08 000000051 INF: ======================================
17-02-28 20:17:32.433 -08 000000087 INF: ======================================
17-02-28 20:17:32.433 -08 000000109 INF: ======================================
17-02-28 20:17:32.434 -08 000000047 INF: ======================================
17-02-28 20:17:32.434 -08 000000050 INF: ======================================
17-02-28 20:17:32.435 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:32.435 -08 000000105 INF: ======================================
17-02-28 20:17:32.435 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:32.436 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:32.436 -08 000000036 INF: ======================================
17-02-28 20:17:32.436 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:32.436 -08 000000034 INF: ======================================
17-02-28 20:17:32.437 -08 000000082 INF: ======================================
17-02-28 20:17:32.438 -08 000000073 INF: ======================================
17-02-28 20:17:32.438 -08 000000066 INF: ======================================
17-02-28 20:17:32.480 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:17:32.518 -08 000000064 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:32.518 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.518 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:32.518 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:32.518 -08 000000064 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Moving to 8.9039 mm @15.000 mm/sec, started at 6.6978 mm
17-02-28 20:17:32.580 -08 000000064 INF: X Motor: Xmit MA -20519\n
17-02-28 20:17:32.582 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.582 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:32.646 -08 000000064 INF: X Motor: Recv MA -20519\r\n>
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:32.646 -08 000000064 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:17:32.646 -08 000000030 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:17:32.705 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.705 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:17:32.705 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:32.770 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:32.770 -08 000000030 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:17:32.770 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:32.894 -08 000000030 INF: Y Motor: Unshifted Position: 1067384
17-02-28 20:17:32.944 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.068 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.204 -08 000000030 INF: Y Motor: Unshifted Position: 1771643
17-02-28 20:17:33.254 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.270 -08 000000064 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:33.329 -08 000000064 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:33.329 -08 000000064 INF: X Motor: Moved to 8.9048 after 683 ms
17-02-28 20:17:33.329 -08 000000064 INF: ======================================
17-02-28 20:17:33.379 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.517 -08 000000030 INF: Y Motor: Unshifted Position: 2559171
17-02-28 20:17:33.567 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.691 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:33.830 -08 000000030 INF: Y Motor: Unshifted Position: 3337451
17-02-28 20:17:33.880 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.004 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.140 -08 000000030 INF: Y Motor: Unshifted Position: 4112522
17-02-28 20:17:34.190 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.320 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.454 -08 000000030 INF: Y Motor: Unshifted Position: 4898292
17-02-28 20:17:34.504 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.629 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.767 -08 000000030 INF: Y Motor: Unshifted Position: 5674243
17-02-28 20:17:34.817 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:34.939 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:35.078 -08 000000030 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:17:35.078 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:35.078 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:35.140 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:35.140 -08 000000030 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:17:35.140 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:35.202 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:35.202 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:35.202 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:35.264 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:35.264 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:35.264 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:35.326 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:35.388 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:35.454 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:35.454 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:35.454 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:35.513 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:17:35.513 -08 000000030 INF: ======================================
17-02-28 20:17:35.514 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:17:35.515 -08 000000077 INF: ======================================
17-02-28 20:17:35.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:35.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:35.518 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:17:35.518 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:17:35.575 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:35.575 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:17:35.638 -08 000000052 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:35.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:35.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:35.639 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:35.701 -08 000000073 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:17:35.701 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:17:35.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:35.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:35.703 -08 000000087 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:35.704 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.704 -08 000000087 INF: ======================================
17-02-28 20:17:35.705 -08 000000077 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:35.705 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.708 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:35.709 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:35.709 -08 000000077 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:17:35.762 -08 000000052 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:35.763 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:35.764 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:35.764 -08 000000077 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:17:35.824 -08 000000010 INF: FPGA: Recv TDIYARM2
17-02-28 20:17:35.825 -08 000000077 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:17:35.827 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.829 -08 000000077 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:35.829 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:35.832 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:35.833 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:35.834 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:36.206 -08 000000077 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:36.206 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:36.206 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:36.221 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:36.223 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:36.601 -08 000000077 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:17:36.601 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:17:36.601 -08 000000077 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:36.617 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:17:36.619 -08 000000077 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:17:36.621 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:36.623 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:36.624 -08 000000077 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:36.625 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:36.627 -08 000000077 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:36.628 -08 000000077 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:36.628 -08 000000077 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:17:36.628 -08 000000077 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:17:36.635 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:17:36.635 -08 000000077 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:17:36.635 -08 000000077 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:17:36.701 -08 000000045 INF: FPGA: Recv ZARM
17-02-28 20:17:36.701 -08 000000077 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.8003 ms
17-02-28 20:17:36.701 -08 000000077 INF: Z Motor: ArmAbsStepped took 73.2402 ms
17-02-28 20:17:36.701 -08 000000077 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:36.703 -08 000000077 INF: ===================TDI Scan Setup===================
17-02-28 20:17:36.704 -08 000000077 INF: ======================================
17-02-28 20:17:36.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:36.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:36.706 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:36.707 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:36.707 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:36.708 -08 000000060 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:36.708 -08 000000060 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:36.708 -08 000000060 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:36.708 -08 000000060 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:36.708 -08 000000060 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:36.708 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:36.709 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:36.709 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:36.709 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:36.710 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:37.073 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:17:37.073 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:17:37.073 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 364.4052 ms
17-02-28 20:17:37.073 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.6208 ms
17-02-28 20:17:37.073 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.7329 ms
17-02-28 20:17:37.074 -08 000000060 INF: Excitation Filter 1: Moved -107 steps in 364.8412 ms
17-02-28 20:17:37.074 -08 000000060 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.4244 ms
17-02-28 20:17:37.074 -08 000000060 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.5164 ms
17-02-28 20:17:37.074 -08 000000105 INF: ======================================
17-02-28 20:17:37.074 -08 000000060 INF: ======================================
17-02-28 20:17:37.076 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:37.078 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:37.079 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:17:37.079 -08 000000108 INF: ===================Serial===================
17-02-28 20:17:37.079 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:37.079 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:37.080 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:37.080 -08 000000089 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:17:37.080 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:37.080 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:37.080 -08 000000108 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:17:37.080 -08 000000108 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:37.081 -08 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:37.081 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:17:37.081 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:37.082 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.082 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.083 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.083 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.086 -08 000000082 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:37.137 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.137 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:37.137 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:37.199 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.199 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:37.232 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.232 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.233 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.233 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:17:37.261 -08 000000089 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:17:37.327 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.327 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:17:37.327 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:37.382 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.382 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.383 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.383 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.388 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:37.388 -08 000000089 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:17:37.388 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.513 -08 000000089 INF: Y Motor: Unshifted Position: 5929483
17-02-28 20:17:37.532 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.532 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.533 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:37.533 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:37.563 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.682 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:37.682 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:37.682 -08 000000045 INF: ===================Camera #2 Frame #1===================
17-02-28 20:17:37.683 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:17:37.683 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:17:37.683 -08 000000053 INF: ===================Camera #0 Frame #1===================
17-02-28 20:17:37.686 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.825 -08 000000089 INF: Y Motor: Unshifted Position: 5882679
17-02-28 20:17:37.836 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:37.836 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:37.836 -08 000000045 INF: ===================Camera #2 Frame #3===================
17-02-28 20:17:37.837 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:17:37.837 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:17:37.837 -08 000000053 INF: ===================Camera #0 Frame #3===================
17-02-28 20:17:37.875 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:37.992 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:37.992 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:37.992 -08 000000045 INF: ===================Camera #2 Frame #4===================
17-02-28 20:17:37.993 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:17:37.993 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:17:37.993 -08 000000053 INF: ===================Camera #0 Frame #4===================
17-02-28 20:17:37.999 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.135 -08 000000089 INF: Y Motor: Unshifted Position: 5835674
17-02-28 20:17:38.146 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:38.146 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:38.146 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:38.146 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:38.146 -08 000000045 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:38.146 -08 000000053 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:38.185 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.195 -08 000000058 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:38.195 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:38.195 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:38.195 -08 000000108 INF: ===================Serial===================
17-02-28 20:17:38.197 -08 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:38.197 -08 000000108 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:17:38.198 -08 000000108 INF: ===================Serial===================
17-02-28 20:17:38.198 -08 000000069 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:38.198 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:38.198 -08 000000069 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:38.198 -08 000000069 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:38.198 -08 000000069 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:38.198 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:38.198 -08 000000069 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:38.198 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:38.198 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:38.199 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:38.199 -08 000000108 INF: ======================================
17-02-28 20:17:38.299 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:38.299 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:38.299 -08 000000053 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:17:38.299 -08 000000053 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:17:38.299 -08 000000045 INF: ===================Camera #2 Frame #6===================
17-02-28 20:17:38.300 -08 000000053 INF: ===================Camera #0 Frame #6===================
17-02-28 20:17:38.303 -08 000000045 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:38.304 -08 000000045 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:38.305 -08 000000053 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:17:38.306 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:38.309 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.330 -08 000000045 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:38.330 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:17:38.331 -08 000000045 INF: ======================================
17-02-28 20:17:38.357 -08 000000053 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:38.357 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:17:38.358 -08 000000053 INF: ======================================
17-02-28 20:17:38.360 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:17:38.361 -08 000000038 INF: ======================================
17-02-28 20:17:38.450 -08 000000089 INF: Y Motor: Unshifted Position: 5790761
17-02-28 20:17:38.500 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:38.570 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:17:38.570 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:17:38.570 -08 000000069 INF: Excitation Filter 1: Moved 107 steps in 371.6911 ms
17-02-28 20:17:38.570 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 371.5489 ms
17-02-28 20:17:38.570 -08 000000069 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8549 ms
17-02-28 20:17:38.570 -08 000000069 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9636 ms
17-02-28 20:17:38.570 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8029 ms
17-02-28 20:17:38.570 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9902 ms
17-02-28 20:17:38.571 -08 000000010 INF: ======================================
17-02-28 20:17:38.571 -08 000000069 INF: ======================================
17-02-28 20:17:38.572 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:38.573 -08 000000082 INF: ======================================
17-02-28 20:17:38.635 -08 000000089 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:17:38.635 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:38.635 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:38.696 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:38.696 -08 000000089 INF: Y Motor: Moved to 62.9074 after 1307 ms
17-02-28 20:17:38.696 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:38.761 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:38.761 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:38.761 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:38.823 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:38.823 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:38.823 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:38.885 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:38.949 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:39.009 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:39.009 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:39.009 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:39.071 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:17:39.071 -08 000000089 INF: ======================================
17-02-28 20:17:39.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:39.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:17:39.074 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.075 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:39.131 -08 000000064 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:39.131 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:39.193 -08 000000050 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:17:39.193 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:39.258 -08 000000073 INF: FPGA: Recv ZADCR 2425
17-02-28 20:17:39.258 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:17:39.258 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:39.320 -08 000000045 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:17:39.320 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:17:39.320 -08 000000018 INF: TDIScan finished after 6904.0711 ms
17-02-28 20:17:39.320 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:39.320 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:17:39.320 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:39.382 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:39.383 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.384 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.385 -08 000000053 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:39.385 -08 000000069 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:39.385 -08 000000053 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:39.385 -08 000000053 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:39.385 -08 000000060 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:39.385 -08 000000069 INF: ======================================
17-02-28 20:17:39.385 -08 000000060 INF: ======================================
17-02-28 20:17:39.446 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:17:39.446 -08 000000053 INF: ======================================
17-02-28 20:17:39.447 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:39.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:39.584 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.585 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:39.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.626 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:39.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:17:39.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:39.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:39.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:17:39.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:39.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:17:39.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:17:40.330 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:17:40.353 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0480988111232224Best Z position at top surface = -0.119421278105909Best Z position at top surface + compensator offset = -0.0967212781059089 C:3,L:2,B
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.119421278105909
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.7187
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0480988111232224
17-02-28 20:17:40.354 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.37508
17-02-28 20:17:40.354 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0480988111232224.
17-02-28 20:17:40.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:40.491 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:40.491 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:40.506 -08 000000053 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:40.507 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:17:40.508 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.508 -08 000000018 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:17:40.509 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.510 -08 000000025 INF: ===================Move Tilt Motor 2===================
17-02-28 20:17:40.510 -08 000000087 INF: ===================Move Tilt Motor 1===================
17-02-28 20:17:40.511 -08 000000057 INF: ===================Move Tilt Motor 3===================
17-02-28 20:17:40.511 -08 000000057 INF: ======================================
17-02-28 20:17:40.511 -08 000000025 INF: ======================================
17-02-28 20:17:40.511 -08 000000087 INF: ======================================
17-02-28 20:17:40.512 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.514 -08 000000018 INF: ETF Best Z: -0.04809881 mm (12609 DAC)
17-02-28 20:17:40.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.515 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:17:40.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.516 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:40.522 -08 000000018 INF: Swath 1 position calculated to be: {X=8.332335, Y=39.70494} from estimated center X= 8.826996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:40.522 -08 000000018 INF: Swath 2 position calculated to be: {X=9.440335, Y=39.70494} from estimated center X= 8.826996, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:17:40.970 -08 000000018 INF: Swath 0: Converted transform from (90.70673, -55.9619) pixels to (0.031395, -0.01932) mm.
17-02-28 20:17:40.976 -08 000000018 INF: Swath 1: Converted transform from (64.98017, -49.59494) pixels to (0.022425, -0.01725) mm.
17-02-28 20:17:40.977 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:40.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:40.978 -08 000000018 INF: Transformed XStagePosition from 8.332335 mm to 8.36373047158122 mm.
17-02-28 20:17:40.989 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4756257397831 mm.
17-02-28 20:17:40.989 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2756257397831 mm.
17-02-28 20:17:40.989 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.366375739783 mm.
17-02-28 20:17:40.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:40.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:40.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:40.992 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:17:40.997 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:40.998 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:40.999 -08 000000089 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:40.999 -08 000000033 INF: ===================Move X,Y===================
17-02-28 20:17:40.999 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:40.999 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:41.000 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:41.000 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:41.000 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:41.000 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:41.000 -08 000000053 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:41.000 -08 000000033 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:41.000 -08 000000053 INF: Z Motor: Moving to -0.0681 mm, started at -0.0100 mm
17-02-28 20:17:41.000 -08 000000053 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:17:41.000 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:41.000 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:41.000 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:41.001 -08 000000030 INF: ===================Move X Motor without settling===================
17-02-28 20:17:41.001 -08 000000109 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:41.001 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:41.001 -08 000000030 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:41.001 -08 000000109 INF: Y Motor: Moving to 64.4756 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:17:41.001 -08 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:41.001 -08 000000109 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:41.001 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:41.001 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:41.001 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:41.001 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:41.001 -08 000000108 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:41.001 -08 000000086 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:41.002 -08 000000086 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:41.002 -08 000000072 INF: ======================================
17-02-28 20:17:41.002 -08 000000035 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:41.002 -08 000000045 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:41.002 -08 000000036 INF: ======================================
17-02-28 20:17:41.002 -08 000000108 INF: ======================================
17-02-28 20:17:41.002 -08 000000045 INF: ======================================
17-02-28 20:17:41.003 -08 000000101 INF: ======================================
17-02-28 20:17:41.003 -08 000000086 INF: ======================================
17-02-28 20:17:41.003 -08 000000035 INF: ======================================
17-02-28 20:17:41.003 -08 000000075 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:41.004 -08 000000057 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:41.004 -08 000000078 INF: ======================================
17-02-28 20:17:41.004 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:41.005 -08 000000075 INF: ======================================
17-02-28 20:17:41.005 -08 000000057 INF: ======================================
17-02-28 20:17:41.006 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:41.006 -08 000000087 INF: ======================================
17-02-28 20:17:41.007 -08 000000025 INF: ======================================
17-02-28 20:17:41.008 -08 000000089 INF: ======================================
17-02-28 20:17:41.021 -08 000000038 INF: FPGA: Recv ZTRG 
17-02-28 20:17:41.021 -08 000000053 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:17:41.023 -08 000000030 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:41.023 -08 000000030 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:41.083 -08 000000078 INF: FPGA: Recv ZYT 
17-02-28 20:17:41.083 -08 000000053 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:17:41.083 -08 000000053 INF: FPGA: Xmit ZMV 17851\n
17-02-28 20:17:41.085 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.085 -08 000000109 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:41.085 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Moving to 8.3637 mm @15.000 mm/sec, started at 8.9048 mm
17-02-28 20:17:41.085 -08 000000030 INF: X Motor: Xmit MA -20741\n
17-02-28 20:17:41.145 -08 000000039 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:17:41.145 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:17:41.147 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.147 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:41.147 -08 000000030 INF: X Motor: Recv MA -20741\r\n>
17-02-28 20:17:41.147 -08 000000030 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:17:41.207 -08 000000025 INF: FPGA: Recv ZMV 
17-02-28 20:17:41.207 -08 000000053 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.9923 ms
17-02-28 20:17:41.207 -08 000000053 INF: FPGA: Xmit ZDACR\n
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Set target position to 5947563 encoder counts
17-02-28 20:17:41.209 -08 000000109 INF: Y Motor: Xmit s r0xca 5947563\r
17-02-28 20:17:41.269 -08 000000039 INF: FPGA: Recv ZDACR 17851
17-02-28 20:17:41.269 -08 000000053 INF: Z Motor: MoveAndTrigger took 269.0945 ms w/comms
17-02-28 20:17:41.269 -08 000000053 INF: Z Motor: After move to -0.0681, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:17:41.269 -08 000000053 INF: Z Motor: MoveAbsStepped took 269.2607 ms
17-02-28 20:17:41.269 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:41.271 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.271 -08 000000109 INF: Y Motor: Start the move command
17-02-28 20:17:41.271 -08 000000109 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:41.271 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:41.272 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.272 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:17:41.273 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.273 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:41.273 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:41.274 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:41.274 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:41.274 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:41.331 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:17:41.332 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:41.332 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:41.333 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:41.333 -08 000000109 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:17:41.333 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:41.395 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:17:41.396 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:41.397 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:41.397 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.399 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:41.399 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:41.399 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:41.455 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:41.455 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.457 -08 000000109 INF: Y Motor: Unshifted Position: 5872627
17-02-28 20:17:41.457 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:41.457 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.459 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:41.459 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:41.459 -08 000000089 INF: Z Motor: Arming to move to -0.0281 mm
17-02-28 20:17:41.459 -08 000000089 INF: FPGA: Xmit ZYT 6427563 4\n
17-02-28 20:17:41.507 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:41.520 -08 000000077 INF: FPGA: Recv ZYT 
17-02-28 20:17:41.520 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372627 enc / 63.726 mm / ) = 6427563 enc / 64.276 mm
17-02-28 20:17:41.520 -08 000000089 INF: FPGA: Xmit ZARM 7366\n
17-02-28 20:17:41.582 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:17:41.582 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2096 ms
17-02-28 20:17:41.582 -08 000000089 INF: Z Motor: ArmAbsStepped took 123.1541 ms
17-02-28 20:17:41.582 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:41.584 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.585 -08 000000030 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:41.585 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:41.586 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.587 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:41.588 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:17:41.589 -08 000000089 INF: ======================================
17-02-28 20:17:41.634 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:41.646 -08 000000030 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:41.646 -08 000000030 INF: X Motor: Moved to 8.3628 after 498 ms
17-02-28 20:17:41.646 -08 000000030 INF: ======================================
17-02-28 20:17:41.770 -08 000000109 INF: Y Motor: Unshifted Position: 5947564
17-02-28 20:17:41.770 -08 000000109 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:41.770 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:41.832 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:41.832 -08 000000109 INF: Y Motor: Moved to 64.4756 after 499 ms
17-02-28 20:17:41.832 -08 000000109 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:41.894 -08 000000109 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:41.894 -08 000000109 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:41.894 -08 000000109 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:41.960 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:41.960 -08 000000109 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:41.960 -08 000000109 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:42.019 -08 000000109 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: Recv v 0\r
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:42.083 -08 000000109 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:42.146 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:42.146 -08 000000109 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:42.146 -08 000000109 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:42.208 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:17:42.208 -08 000000109 INF: ======================================
17-02-28 20:17:42.209 -08 000000033 INF: ===================Move X,Y===================
17-02-28 20:17:42.210 -08 000000033 INF: ======================================
17-02-28 20:17:42.248 -08 000000050 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:42.248 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:42.248 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:42.263 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:42.265 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:43.322 -08 000000050 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:43.322 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:43.322 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:43.337 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:43.339 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:17:43.340 -08 000000050 INF: ======================================
17-02-28 20:17:43.341 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:43.342 -08 000000053 INF: ======================================
17-02-28 20:17:43.343 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:43.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:43.344 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:43.344 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:43.392 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:43.392 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:43.452 -08 000000066 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:43.452 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:43.452 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:43.452 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:43.514 -08 000000105 INF: FPGA: Recv TDIYERD 6447564
17-02-28 20:17:43.514 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447564 counts (64.476 mm)
17-02-28 20:17:43.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:43.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:43.515 -08 000000109 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:43.515 -08 000000101 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:43.516 -08 000000101 INF: ======================================
17-02-28 20:17:43.516 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:43.517 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:43.517 -08 000000109 INF: FPGA: Xmit TDIYPOS 6336638\n
17-02-28 20:17:43.579 -08 000000050 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:43.579 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:43.581 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:43.581 -08 000000109 INF: FPGA: Xmit TDIYARM3 139264 6427563 1 1\n
17-02-28 20:17:43.641 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:43.641 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:43.642 -08 000000109 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:43.643 -08 000000109 INF: ======================================
17-02-28 20:17:43.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:43.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:43.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:43.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:43.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:43.647 -08 000000036 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:43.647 -08 000000038 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:43.647 -08 000000036 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:43.647 -08 000000036 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:43.647 -08 000000036 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:43.647 -08 000000038 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:43.647 -08 000000038 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:43.647 -08 000000038 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:43.647 -08 000000036 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:43.650 -08 000000038 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:44.016 -08 000000087 INF: FPGA: Recv EX2MV
17-02-28 20:17:44.016 -08 000000087 INF: FPGA: Recv EX1MV
17-02-28 20:17:44.016 -08 000000036 INF: Excitation Filter 2: Moved -107 steps in 368.7672 ms
17-02-28 20:17:44.016 -08 000000038 INF: Excitation Filter 1: Moved -107 steps in 368.6749 ms
17-02-28 20:17:44.016 -08 000000036 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.8611 ms
17-02-28 20:17:44.016 -08 000000036 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.9649 ms
17-02-28 20:17:44.016 -08 000000038 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7991 ms
17-02-28 20:17:44.016 -08 000000038 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9698 ms
17-02-28 20:17:44.016 -08 000000036 INF: ======================================
17-02-28 20:17:44.016 -08 000000038 INF: ======================================
17-02-28 20:17:44.017 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:44.018 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:44.019 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:17:44.019 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:44.019 -08 000000077 INF: ===================FPGA Z Wait===================
17-02-28 20:17:44.019 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:44.019 -08 000000077 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:44.020 -08 000000069 INF: Y Motor: Moving to 14.8273 mm @6.500 mm/sec, started at 64.4756 mm
17-02-28 20:17:44.020 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:44.020 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:44.020 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:44.020 -08 000000057 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:44.021 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:17:44.021 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:44.021 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:44.022 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.022 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.023 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.023 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.080 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.080 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:44.080 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:44.142 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.142 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:44.172 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.172 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.173 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.173 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Set target position to 982729 encoder counts
17-02-28 20:17:44.204 -08 000000069 INF: Y Motor: Xmit s r0xca 982729\r
17-02-28 20:17:44.266 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.266 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:17:44.266 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:44.322 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.322 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.323 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:44.323 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:44.328 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:44.328 -08 000000069 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:44.328 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.388 -08 000000034 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:44.388 -08 000000077 INF: ======================================
17-02-28 20:17:44.452 -08 000000069 INF: Y Motor: Unshifted Position: 5885703
17-02-28 20:17:44.472 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:44.472 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:44.472 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:44.473 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:44.473 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:44.473 -08 000000060 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:44.502 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.630 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.639 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:44.639 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:44.639 -08 000000101 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:44.640 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:44.640 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:44.640 -08 000000060 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:44.766 -08 000000069 INF: Y Motor: Unshifted Position: 5682042
17-02-28 20:17:44.809 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:44.809 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:44.809 -08 000000101 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:44.811 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:44.811 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:44.811 -08 000000060 INF: ===================Camera #2 Frame #17===================
17-02-28 20:17:44.816 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.939 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:44.979 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:44.979 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:44.979 -08 000000101 INF: ===================Camera #0 Frame #23===================
17-02-28 20:17:44.982 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:17:44.982 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:17:44.982 -08 000000060 INF: ===================Camera #2 Frame #23===================
17-02-28 20:17:45.076 -08 000000069 INF: Y Motor: Unshifted Position: 5479679
17-02-28 20:17:45.126 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.149 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:17:45.149 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:17:45.149 -08 000000101 INF: ===================Camera #0 Frame #29===================
17-02-28 20:17:45.153 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:45.153 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:45.153 -08 000000060 INF: ===================Camera #2 Frame #30===================
17-02-28 20:17:45.253 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.317 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:45.317 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:45.317 -08 000000101 INF: ===================Camera #0 Frame #36===================
17-02-28 20:17:45.326 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:45.326 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:45.326 -08 000000060 INF: ===================Camera #2 Frame #36===================
17-02-28 20:17:45.389 -08 000000069 INF: Y Motor: Unshifted Position: 5276229
17-02-28 20:17:45.439 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.489 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:45.489 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:45.490 -08 000000101 INF: ===================Camera #0 Frame #42===================
17-02-28 20:17:45.495 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:17:45.495 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:17:45.495 -08 000000060 INF: ===================Camera #2 Frame #42===================
17-02-28 20:17:45.564 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.658 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:45.658 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:45.658 -08 000000101 INF: ===================Camera #0 Frame #48===================
17-02-28 20:17:45.664 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:17:45.664 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:17:45.664 -08 000000060 INF: ===================Camera #2 Frame #48===================
17-02-28 20:17:45.702 -08 000000069 INF: Y Motor: Unshifted Position: 5072782
17-02-28 20:17:45.752 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.827 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:17:45.827 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:17:45.827 -08 000000101 INF: ===================Camera #0 Frame #54===================
17-02-28 20:17:45.833 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:17:45.833 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:17:45.833 -08 000000060 INF: ===================Camera #2 Frame #55===================
17-02-28 20:17:45.876 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:45.996 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:17:45.996 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:17:45.996 -08 000000101 INF: ===================Camera #0 Frame #61===================
17-02-28 20:17:46.006 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:17:46.006 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:17:46.006 -08 000000060 INF: ===================Camera #2 Frame #61===================
17-02-28 20:17:46.013 -08 000000069 INF: Y Motor: Unshifted Position: 4871062
17-02-28 20:17:46.063 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.168 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:46.168 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:46.168 -08 000000101 INF: ===================Camera #0 Frame #67===================
17-02-28 20:17:46.175 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:17:46.175 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:17:46.175 -08 000000060 INF: ===================Camera #2 Frame #67===================
17-02-28 20:17:46.191 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.326 -08 000000069 INF: Y Motor: Unshifted Position: 4667612
17-02-28 20:17:46.338 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:46.338 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:46.338 -08 000000101 INF: ===================Camera #0 Frame #73===================
17-02-28 20:17:46.345 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:17:46.345 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:17:46.345 -08 000000060 INF: ===================Camera #2 Frame #73===================
17-02-28 20:17:46.376 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.500 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.507 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:17:46.507 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:17:46.507 -08 000000101 INF: ===================Camera #0 Frame #79===================
17-02-28 20:17:46.514 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:17:46.514 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:17:46.514 -08 000000060 INF: ===================Camera #2 Frame #80===================
17-02-28 20:17:46.637 -08 000000069 INF: Y Motor: Unshifted Position: 4463285
17-02-28 20:17:46.675 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:17:46.675 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:17:46.675 -08 000000101 INF: ===================Camera #0 Frame #86===================
17-02-28 20:17:46.687 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.687 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:17:46.687 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:17:46.687 -08 000000060 INF: ===================Camera #2 Frame #86===================
17-02-28 20:17:46.814 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:46.847 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:46.847 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:46.847 -08 000000101 INF: ===================Camera #0 Frame #92===================
17-02-28 20:17:46.857 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:17:46.857 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:17:46.857 -08 000000060 INF: ===================Camera #2 Frame #92===================
17-02-28 20:17:46.950 -08 000000069 INF: Y Motor: Unshifted Position: 4261566
17-02-28 20:17:47.000 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.017 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:17:47.017 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:17:47.017 -08 000000101 INF: ===================Camera #0 Frame #98===================
17-02-28 20:17:47.028 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:17:47.028 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:17:47.028 -08 000000060 INF: ===================Camera #2 Frame #99===================
17-02-28 20:17:47.124 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.187 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:17:47.187 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:17:47.187 -08 000000101 INF: ===================Camera #0 Frame #104===================
17-02-28 20:17:47.202 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:17:47.202 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:17:47.202 -08 000000060 INF: ===================Camera #2 Frame #105===================
17-02-28 20:17:47.261 -08 000000069 INF: Y Motor: Unshifted Position: 4057467
17-02-28 20:17:47.311 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.357 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:17:47.357 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:17:47.357 -08 000000101 INF: ===================Camera #0 Frame #111===================
17-02-28 20:17:47.373 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:17:47.373 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:17:47.373 -08 000000060 INF: ===================Camera #2 Frame #111===================
17-02-28 20:17:47.437 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.529 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:17:47.529 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:17:47.529 -08 000000101 INF: ===================Camera #0 Frame #117===================
17-02-28 20:17:47.542 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:17:47.542 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:17:47.543 -08 000000060 INF: ===================Camera #2 Frame #118===================
17-02-28 20:17:47.573 -08 000000069 INF: Y Motor: Unshifted Position: 3856613
17-02-28 20:17:47.623 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.697 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:17:47.697 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:17:47.697 -08 000000101 INF: ===================Camera #0 Frame #123===================
17-02-28 20:17:47.715 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:17:47.715 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:17:47.715 -08 000000060 INF: ===================Camera #2 Frame #124===================
17-02-28 20:17:47.750 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:47.867 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:17:47.867 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:17:47.867 -08 000000101 INF: ===================Camera #0 Frame #130===================
17-02-28 20:17:47.886 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:17:47.886 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:17:47.886 -08 000000060 INF: ===================Camera #2 Frame #130===================
17-02-28 20:17:47.888 -08 000000069 INF: Y Motor: Unshifted Position: 3652947
17-02-28 20:17:47.938 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.039 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:17:48.039 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:17:48.039 -08 000000101 INF: ===================Camera #0 Frame #136===================
17-02-28 20:17:48.056 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:17:48.056 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:17:48.056 -08 000000060 INF: ===================Camera #2 Frame #136===================
17-02-28 20:17:48.060 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.197 -08 000000069 INF: Y Motor: Unshifted Position: 3448626
17-02-28 20:17:48.209 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:17:48.209 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:17:48.209 -08 000000101 INF: ===================Camera #0 Frame #142===================
17-02-28 20:17:48.227 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:17:48.227 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:17:48.227 -08 000000060 INF: ===================Camera #2 Frame #143===================
17-02-28 20:17:48.247 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.374 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.379 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:17:48.379 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:17:48.379 -08 000000101 INF: ===================Camera #0 Frame #148===================
17-02-28 20:17:48.401 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:17:48.401 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:17:48.401 -08 000000060 INF: ===================Camera #2 Frame #149===================
17-02-28 20:17:48.510 -08 000000069 INF: Y Motor: Unshifted Position: 3247128
17-02-28 20:17:48.549 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:17:48.549 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:17:48.549 -08 000000101 INF: ===================Camera #0 Frame #155===================
17-02-28 20:17:48.560 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.572 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:17:48.572 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:17:48.572 -08 000000060 INF: ===================Camera #2 Frame #155===================
17-02-28 20:17:48.684 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.722 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:17:48.722 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:17:48.722 -08 000000101 INF: ===================Camera #0 Frame #161===================
17-02-28 20:17:48.743 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:17:48.743 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:17:48.743 -08 000000060 INF: ===================Camera #2 Frame #162===================
17-02-28 20:17:48.821 -08 000000069 INF: Y Motor: Unshifted Position: 3042826
17-02-28 20:17:48.871 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:48.892 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:17:48.892 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:17:48.892 -08 000000101 INF: ===================Camera #0 Frame #167===================
17-02-28 20:17:48.917 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:17:48.917 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:17:48.917 -08 000000060 INF: ===================Camera #2 Frame #168===================
17-02-28 20:17:48.998 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.061 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:17:49.061 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:17:49.061 -08 000000101 INF: ===================Camera #0 Frame #173===================
17-02-28 20:17:49.088 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:17:49.088 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:17:49.088 -08 000000060 INF: ===================Camera #2 Frame #174===================
17-02-28 20:17:49.134 -08 000000069 INF: Y Motor: Unshifted Position: 2836346
17-02-28 20:17:49.184 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.230 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:17:49.230 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:17:49.230 -08 000000101 INF: ===================Camera #0 Frame #180===================
17-02-28 20:17:49.259 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:17:49.259 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:17:49.259 -08 000000060 INF: ===================Camera #2 Frame #181===================
17-02-28 20:17:49.308 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.403 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:17:49.403 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:17:49.403 -08 000000101 INF: ===================Camera #0 Frame #186===================
17-02-28 20:17:49.433 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:17:49.433 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:17:49.433 -08 000000060 INF: ===================Camera #2 Frame #187===================
17-02-28 20:17:49.445 -08 000000069 INF: Y Motor: Unshifted Position: 2637004
17-02-28 20:17:49.495 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.573 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:17:49.573 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:17:49.573 -08 000000101 INF: ===================Camera #0 Frame #192===================
17-02-28 20:17:49.603 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:17:49.603 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:17:49.603 -08 000000060 INF: ===================Camera #2 Frame #193===================
17-02-28 20:17:49.622 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.743 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:17:49.743 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:17:49.743 -08 000000101 INF: ===================Camera #0 Frame #199===================
17-02-28 20:17:49.758 -08 000000069 INF: Y Motor: Unshifted Position: 2435519
17-02-28 20:17:49.774 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:17:49.774 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:17:49.774 -08 000000060 INF: ===================Camera #2 Frame #200===================
17-02-28 20:17:49.808 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.915 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:17:49.915 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:17:49.915 -08 000000101 INF: ===================Camera #0 Frame #205===================
17-02-28 20:17:49.932 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:49.948 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:17:49.948 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:17:49.948 -08 000000060 INF: ===================Camera #2 Frame #206===================
17-02-28 20:17:50.069 -08 000000069 INF: Y Motor: Unshifted Position: 2231200
17-02-28 20:17:50.084 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:17:50.084 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:17:50.084 -08 000000101 INF: ===================Camera #0 Frame #211===================
17-02-28 20:17:50.119 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.120 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:17:50.120 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:17:50.120 -08 000000060 INF: ===================Camera #2 Frame #212===================
17-02-28 20:17:50.246 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.254 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:17:50.254 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:17:50.254 -08 000000101 INF: ===================Camera #0 Frame #217===================
17-02-28 20:17:50.291 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:17:50.291 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:17:50.291 -08 000000060 INF: ===================Camera #2 Frame #219===================
17-02-28 20:17:50.382 -08 000000069 INF: Y Motor: Unshifted Position: 2029689
17-02-28 20:17:50.424 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:17:50.424 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:17:50.424 -08 000000101 INF: ===================Camera #0 Frame #224===================
17-02-28 20:17:50.432 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.465 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:17:50.465 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:17:50.465 -08 000000060 INF: ===================Camera #2 Frame #225===================
17-02-28 20:17:50.556 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.597 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:17:50.597 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:17:50.597 -08 000000101 INF: ===================Camera #0 Frame #230===================
17-02-28 20:17:50.636 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:17:50.636 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:17:50.636 -08 000000060 INF: ===================Camera #2 Frame #231===================
17-02-28 20:17:50.693 -08 000000069 INF: Y Motor: Unshifted Position: 1825376
17-02-28 20:17:50.743 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.767 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:17:50.767 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:17:50.767 -08 000000101 INF: ===================Camera #0 Frame #236===================
17-02-28 20:17:50.807 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:17:50.807 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:17:50.807 -08 000000060 INF: ===================Camera #2 Frame #238===================
17-02-28 20:17:50.870 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:50.937 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:17:50.937 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:17:50.937 -08 000000101 INF: ===================Camera #0 Frame #243===================
17-02-28 20:17:50.981 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:17:50.981 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:17:50.981 -08 000000060 INF: ===================Camera #2 Frame #244===================
17-02-28 20:17:51.006 -08 000000069 INF: Y Motor: Unshifted Position: 1623878
17-02-28 20:17:51.056 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.110 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:17:51.110 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:17:51.110 -08 000000101 INF: ===================Camera #0 Frame #249===================
17-02-28 20:17:51.152 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:17:51.152 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:17:51.152 -08 000000060 INF: ===================Camera #2 Frame #250===================
17-02-28 20:17:51.180 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.280 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:17:51.280 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:17:51.280 -08 000000101 INF: ===================Camera #0 Frame #255===================
17-02-28 20:17:51.317 -08 000000069 INF: Y Motor: Unshifted Position: 1419551
17-02-28 20:17:51.323 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:17:51.323 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:17:51.323 -08 000000060 INF: ===================Camera #2 Frame #257===================
17-02-28 20:17:51.367 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.450 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:17:51.450 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:17:51.450 -08 000000101 INF: ===================Camera #0 Frame #261===================
17-02-28 20:17:51.494 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.497 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:17:51.497 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:17:51.497 -08 000000060 INF: ===================Camera #2 Frame #263===================
17-02-28 20:17:51.620 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:17:51.620 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:17:51.620 -08 000000101 INF: ===================Camera #0 Frame #268===================
17-02-28 20:17:51.630 -08 000000069 INF: Y Motor: Unshifted Position: 1218054
17-02-28 20:17:51.668 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:17:51.668 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:17:51.668 -08 000000060 INF: ===================Camera #2 Frame #269===================
17-02-28 20:17:51.680 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.752 -08 000000035 INF: FPGA: Recv TDIYWAIT
17-02-28 20:17:51.752 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:51.754 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:17:51.755 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:17:51.755 -08 000000053 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:17:51.755 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:17:51.755 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:17:51.755 -08 000000072 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:17:51.755 -08 000000072 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:17:51.755 -08 000000053 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:17:51.755 -08 000000053 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:17:51.755 -08 000000053 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:17:51.756 -08 000000053 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:17:51.792 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:51.792 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:51.792 -08 000000101 INF: ===================Camera #0 Frame #272===================
17-02-28 20:17:51.805 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:51.805 -08 000000101 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:51.806 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:51.941 -08 000000069 INF: Y Motor: Unshifted Position: 1013738
17-02-28 20:17:51.968 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:17:51.968 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:17:51.968 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:17:51.968 -08 000000060 INF: ===================Camera #2 Frame #272===================
17-02-28 20:17:51.968 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:17:51.978 -08 000000060 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:17:51.979 -08 000000060 INF: ===================CameraTDI Cleanup===================
17-02-28 20:17:51.991 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:52.002 -08 000000101 INF: ======================================
17-02-28 20:17:52.126 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:17:52.126 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:17:52.126 -08 000000053 INF: Excitation Filter 1: Moved 107 steps in 370.6753 ms
17-02-28 20:17:52.126 -08 000000053 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.7691 ms
17-02-28 20:17:52.126 -08 000000053 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.8733 ms
17-02-28 20:17:52.126 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 370.8973 ms
17-02-28 20:17:52.126 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1269 ms
17-02-28 20:17:52.126 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.2383 ms
17-02-28 20:17:52.126 -08 000000053 INF: ======================================
17-02-28 20:17:52.126 -08 000000072 INF: ======================================
17-02-28 20:17:52.128 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:52.128 -08 000000069 INF: Y Motor: Unshifted Position: 982728
17-02-28 20:17:52.128 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:52.128 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:52.129 -08 000000039 INF: ======================================
17-02-28 20:17:52.175 -08 000000060 INF: Camera #2 ReleaseBuffer
17-02-28 20:17:52.175 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:17:52.194 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:52.194 -08 000000069 INF: Y Motor: Moved to 14.8273 after 7865 ms
17-02-28 20:17:52.194 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:52.209 -08 000000060 INF: ======================================
17-02-28 20:17:52.210 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:17:52.212 -08 000000057 INF: ======================================
17-02-28 20:17:52.253 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:17:52.253 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:52.253 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:52.315 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:52.315 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:52.315 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:52.380 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:52.442 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:52.504 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:52.504 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:52.504 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:52.566 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:17:52.566 -08 000000069 INF: ======================================
17-02-28 20:17:52.567 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:52.568 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:52.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.569 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:17:52.628 -08 000000030 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:17:52.629 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:52.688 -08 000000010 INF: FPGA: Recv TDIYERD 1482730
17-02-28 20:17:52.688 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:17:52.750 -08 000000090 INF: FPGA: Recv ZADCR 16155
17-02-28 20:17:52.750 -08 000000018 INF: At scan end Y pos = 14.827 and Z pos = -0.062. Y moved -48.539 mm
17-02-28 20:17:52.750 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:17:52.816 -08 000000069 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:17:52.816 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:17:52.816 -08 000000018 INF: TDIScan finished after 11837.5527 ms
17-02-28 20:17:52.816 -08 000000018 INF: Image[0]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:17:52.816 -08 000000018 INF: Image[2]: Y should trigger at 63.366 mm, 2nd row was at 64.275 mm (error = 0.909 mm)
17-02-28 20:17:52.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.847 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.977 um
17-02-28 20:17:52.847 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.848 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:17:52.877 -08 000000064 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:17:52.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:52.879 -08 000000039 INF: ===================Dither Clean Up Command===================
17-02-28 20:17:52.879 -08 000000077 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:17:52.879 -08 000000050 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:17:52.879 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:17:52.879 -08 000000077 INF: ======================================
17-02-28 20:17:52.879 -08 000000050 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:17:52.879 -08 000000050 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:17:52.880 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:52.880 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:52.880 -08 000000078 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:17:52.880 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:17:52.881 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:17:52.883 -08 000000010 INF: ===================LFT:Extracting coords===================
17-02-28 20:17:52.908 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:52.909 -08 000000010 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:17:52.910 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:17:52.910 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.910 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.910 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.911 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:17:52.937 -08 000000038 INF: FPGA: Recv ZSEL 
17-02-28 20:17:52.937 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:52.937 -08 000000078 INF: FPGA: Xmit ZDACW 17851\n
17-02-28 20:17:52.937 -08 000000086 INF: ======================================
17-02-28 20:17:52.939 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:17:52.939 -08 000000050 INF: ======================================
17-02-28 20:17:52.984 -08 000000066 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:52.984 -08 000000069 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:52.985 -08 000000089 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:52.985 -08 000000081 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:17:53.002 -08 000000087 INF: FPGA: Recv ZDACW 
17-02-28 20:17:53.003 -08 000000078 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:17:53.003 -08 000000078 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:17:53.064 -08 000000050 INF: FPGA: Recv TDIBB
17-02-28 20:17:53.064 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:17:53.065 -08 000000078 INF: ======================================
17-02-28 20:17:53.136 -08 000000066 INF: LFT found best fwhm score 2.000201 in 152 ms
17-02-28 20:17:53.136 -08 000000066 INF: LFT found good score at index 3313 with fwhm value 2.000201. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000069 INF: LFT found best fwhm score 2.000568 in 151 ms
17-02-28 20:17:53.136 -08 000000069 INF: LFT found good score at index 4497 with fwhm value 2.000568. Next cycle, cycle 4 starting Z position for bottom surface is at -0.047 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000089 INF: LFT found best fwhm score 2.000016 in 151 ms
17-02-28 20:17:53.136 -08 000000089 INF: LFT found good score at index 1957 with fwhm value 2.000016. Next cycle, cycle 4 starting Z position for bottom surface is at -0.047 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.136 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.136 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.136 -08 000000066 INF: ======================================
17-02-28 20:17:53.136 -08 000000081 INF: LFT found best fwhm score 2.000077 in 151 ms
17-02-28 20:17:53.136 -08 000000081 INF: LFT found good score at index 4425 with fwhm value 2.000077. Next cycle, cycle 4 starting Z position for bottom surface is at -0.047 mm FC:A, C:3,L:2,B
17-02-28 20:17:53.136 -08 000000069 INF: ======================================
17-02-28 20:17:53.136 -08 000000089 INF: ======================================
17-02-28 20:17:53.137 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:17:53.137 -08 000000081 INF: ======================================
17-02-28 20:17:53.137 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:17:53.138 -08 000000010 INF: LFT weighted average best Z for bottom surface is at -0.047mm FC:A, C:3,L:2,B
17-02-28 20:17:53.139 -08 000000010 INF: ======================================
17-02-28 20:17:53.140 -08 000000039 INF: ======================================
17-02-28 20:17:53.141 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:17:53.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:53.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 8.332335 Y = 39.70494===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:17:53.144 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:17:53.167 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:17:53.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:17:53.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:17:53.168 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.168 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:17:53.168 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:17:53.168 -08 000000018 INF: Transformed XStagePosition from 9.440335 mm to 9.46276027336717 mm.
17-02-28 20:17:53.180 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4776957401782 mm.
17-02-28 20:17:53.180 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2776957401782 mm.
17-02-28 20:17:53.180 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3684457401782 mm.
17-02-28 20:17:53.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:17:53.183 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:53.183 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -68.1 um, section = B_1
17-02-28 20:17:53.185 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:53.185 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:53.211 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":2,"Tile":2102,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF208","HCSMMF225","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.239 -08 000000077 INF: ===================MoveEmissionFilters===================
17-02-28 20:17:53.241 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:17:53.241 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:53.242 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:17:53.242 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:53.247 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:53.248 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:17:53.248 -08 000000025 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:17:53.248 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:53.250 -08 000000060 INF: ===================Move X Motor without settling===================
17-02-28 20:17:53.250 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:17:53.250 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:53.250 -08 000000060 INF: X Motor: Xmit PR VM\n
17-02-28 20:17:53.251 -08 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:17:53.251 -08 000000047 INF: ======================================
17-02-28 20:17:53.251 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:53.251 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:53.252 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:53.253 -08 000000064 INF: Y Motor: Moving to 64.4777 mm @25.000 mm/sec, started at 14.8273 mm
17-02-28 20:17:53.253 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:17:53.253 -08 000000047 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:17:53.253 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:53.253 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:53.253 -08 000000047 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:17:53.254 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:53.254 -08 000000047 INF: ======================================
17-02-28 20:17:53.254 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.254 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:17:53.255 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:17:53.255 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.255 -08 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:17:53.255 -08 000000039 INF: ======================================
17-02-28 20:17:53.256 -08 000000081 INF: ======================================
17-02-28 20:17:53.256 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:53.257 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:53.257 -08 000000036 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:17:53.257 -08 000000051 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:17:53.257 -08 000000030 INF: ===================Camera Arm TDI===================
17-02-28 20:17:53.257 -08 000000010 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:17:53.257 -08 000000036 INF: ======================================
17-02-28 20:17:53.257 -08 000000053 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:17:53.258 -08 000000010 INF: ======================================
17-02-28 20:17:53.258 -08 000000053 INF: ======================================
17-02-28 20:17:53.258 -08 000000030 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:53.258 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:17:53.258 -08 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:17:53.259 -08 000000030 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:53.259 -08 000000047 INF: ======================================
17-02-28 20:17:53.260 -08 000000085 INF: ======================================
17-02-28 20:17:53.260 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:17:53.263 -08 000000038 INF: ======================================
17-02-28 20:17:53.265 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":2,"Tile":2101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF237","HCSMMF214","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.265 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:17:53.266 -08 000000052 INF: ======================================
17-02-28 20:17:53.281 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:17:53.281 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":2,"Tile":2103,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF202","HCSMMF223","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.284 -08 000000033 INF: ======================================
17-02-28 20:17:53.286 -08 000000077 INF: ======================================
17-02-28 20:17:53.295 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":2,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF180","HCSMMF233","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.305 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":2,"Tile":2112,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF283","HCSMMF279","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.307 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":2,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF203","HCSMMF181","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.316 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":2,"Tile":2106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF206","HCSMMF240","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.319 -08 000000077 INF: FPGA: Recv ZSEL 
17-02-28 20:17:53.320 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:53.320 -08 000000051 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:17:53.321 -08 000000060 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:17:53.321 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.321 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:53.321 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:53.321 -08 000000060 INF: X Motor: Xmit PR VI\n
17-02-28 20:17:53.365 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":2,"Tile":2110,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF245","HCSMMF273","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.366 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":2,"Tile":2105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF188","HCSMMF251","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.367 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":2,"Tile":2108,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF285","HCSMMF178","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.368 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":2,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF193","HCSMMF230","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.371 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":2,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF248","HCSMMF268","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.371 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":2,"Tile":2104,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF252","HCSMMF197","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.372 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":2,"Tile":2113,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF198","HCSMMF210","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.373 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":2,"Tile":2114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF191","HCSMMF200","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.374 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":2,"Tile":2117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF189","HCSMMF265","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.374 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":2,"Tile":2120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF229","HCSMMF271","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.375 -08 000000035 INF: FPGA: Recv TDIBB
17-02-28 20:17:53.375 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":2,"Tile":2118,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF185","HCSMMF256","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.376 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:17:53.376 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":2,"Tile":2122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF287","HCSMMF269","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Moving to 9.4628 mm @15.000 mm/sec, started at 8.3628 mm
17-02-28 20:17:53.377 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":2,"Tile":2116,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF232","HCSMMF282","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.377 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.377 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:53.377 -08 000000060 INF: X Motor: Xmit MA -20290\n
17-02-28 20:17:53.378 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:17:53.378 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":2,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF211","HCSMMF254","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.378 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.379 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":2,"Tile":2121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF218","HCSMMF204","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.380 -08 000000051 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:17:53.380 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":2,"Tile":2124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF247","HCSMMF280","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.380 -08 000000051 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:17:53.380 -08 000000051 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:17:53.381 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":2,"Tile":2119,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF262","HCSMMF177","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.382 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":2,"Tile":2126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF196","HCSMMF257","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.385 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":2,"Tile":2127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF236","HCSMMF246","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.386 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":2,"Tile":2123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF242","HCSMMF205","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.387 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":2,"Tile":2128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF243","HCSMMF221","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:17:53.404 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.410 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:17:53.437 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:17:53.437 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.439 -08 000000060 INF: X Motor: Recv MA -20290\r\n>
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:53.439 -08 000000060 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Set target position to 5947770 encoder counts
17-02-28 20:17:53.439 -08 000000064 INF: Y Motor: Xmit s r0xca 5947770\r
17-02-28 20:17:53.439 -08 000000051 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:17:53.439 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.441 -08 000000051 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:17:53.441 -08 000000051 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:17:53.441 -08 000000051 INF: Z Motor: Arming to move to -0.0281 mm
17-02-28 20:17:53.441 -08 000000051 INF: FPGA: Xmit ZYT 6427770 4\n
17-02-28 20:17:53.495 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.495 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:17:53.502 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:17:53.502 -08 000000051 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482728 enc / 14.827 mm / ) = 6427770 enc / 64.278 mm
17-02-28 20:17:53.502 -08 000000051 INF: FPGA: Xmit ZARM 7366\n
17-02-28 20:17:53.503 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.503 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:17:53.503 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:53.532 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.538 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:17:53.563 -08 000000101 INF: FPGA: Recv ZARM
17-02-28 20:17:53.563 -08 000000051 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0695 ms
17-02-28 20:17:53.563 -08 000000051 INF: Z Motor: ArmAbsStepped took 121.8281 ms
17-02-28 20:17:53.563 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:17:53.565 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:53.565 -08 000000064 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:17:53.565 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:53.565 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.567 -08 000000051 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:17:53.567 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.569 -08 000000051 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:17:53.569 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:17:53.570 -08 000000051 INF: ======================================
17-02-28 20:17:53.630 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.636 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:17:53.688 -08 000000064 INF: Y Motor: Unshifted Position: 1064315
17-02-28 20:17:53.737 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.738 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:53.743 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:17:53.846 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:17:53.863 -08 000000030 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:53.863 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:53.864 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:53.864 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:53.879 -08 000000030 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:53.881 -08 000000030 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:17:54.002 -08 000000064 INF: Y Motor: Unshifted Position: 1766893
17-02-28 20:17:54.052 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.064 -08 000000060 INF: X Motor: Xmit PR ER\n
17-02-28 20:17:54.126 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:17:54.127 -08 000000060 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:17:54.127 -08 000000060 INF: X Motor: Moved to 9.4639 after 688 ms
17-02-28 20:17:54.127 -08 000000060 INF: ======================================
17-02-28 20:17:54.177 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.313 -08 000000064 INF: Y Motor: Unshifted Position: 2552740
17-02-28 20:17:54.363 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.490 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.509 -08 000000030 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:17:54.509 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:17:54.509 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:17:54.524 -08 000000030 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:17:54.526 -08 000000030 INF: ===================Camera Arm TDI===================
17-02-28 20:17:54.527 -08 000000030 INF: ======================================
17-02-28 20:17:54.528 -08 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:17:54.529 -08 000000025 INF: ======================================
17-02-28 20:17:54.632 -08 000000064 INF: Y Motor: Unshifted Position: 3332694
17-02-28 20:17:54.682 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.802 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:54.938 -08 000000064 INF: Y Motor: Unshifted Position: 4108594
17-02-28 20:17:54.988 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.112 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.250 -08 000000064 INF: Y Motor: Unshifted Position: 4888528
17-02-28 20:17:55.300 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.423 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.561 -08 000000064 INF: Y Motor: Unshifted Position: 5672975
17-02-28 20:17:55.611 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.737 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:55.872 -08 000000064 INF: Y Motor: Unshifted Position: 5947772
17-02-28 20:17:55.872 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:17:55.872 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:55.938 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:55.938 -08 000000064 INF: Y Motor: Moved to 64.4777 after 2373 ms
17-02-28 20:17:55.938 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:17:55.998 -08 000000064 INF: Y Motor: Recv v 4096\r
17-02-28 20:17:55.998 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:17:55.998 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:56.062 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:56.062 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:56.062 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: Recv v 402653184\r
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:17:56.122 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:17:56.186 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:56.249 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:56.249 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:17:56.249 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:56.310 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:17:56.310 -08 000000064 INF: ======================================
17-02-28 20:17:56.311 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:17:56.312 -08 000000069 INF: ======================================
17-02-28 20:17:56.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:17:56.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:56.315 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:17:56.315 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:17:56.373 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:17:56.373 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:17:56.435 -08 000000086 INF: FPGA: Recv ZFREQCL
17-02-28 20:17:56.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:17:56.435 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:56.436 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:17:56.496 -08 000000025 INF: FPGA: Recv TDIYERD 6447771
17-02-28 20:17:56.496 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447771 counts (64.478 mm)
17-02-28 20:17:56.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:56.497 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:56.498 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:56.498 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:17:56.498 -08 000000058 INF: ======================================
17-02-28 20:17:56.499 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:56.499 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:17:56.499 -08 000000053 INF: FPGA: Xmit TDIYPOS 6336845\n
17-02-28 20:17:56.545 -08 000000081 INF: RunCopyService queue size at 2/28/2017 8:17:56 PM is 2
17-02-28 20:17:56.558 -08 000000064 INF: FPGA: Recv TDIYPOS
17-02-28 20:17:56.562 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:56.563 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:17:56.563 -08 000000053 INF: FPGA: Xmit TDIYARM3 139264 6427770 1 1\n
17-02-28 20:17:56.622 -08 000000050 INF: FPGA: Recv TDIYARM3
17-02-28 20:17:56.623 -08 000000053 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:17:56.624 -08 000000053 INF: ===================TDI FPGA Arm===================
17-02-28 20:17:56.625 -08 000000053 INF: ======================================
17-02-28 20:17:56.626 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:17:56.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:17:56.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:56.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:56.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:56.629 -08 000000108 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:17:56.629 -08 000000073 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:17:56.629 -08 000000108 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:17:56.629 -08 000000108 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:17:56.629 -08 000000073 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:17:56.629 -08 000000108 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:17:56.629 -08 000000073 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:17:56.629 -08 000000073 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:17:56.629 -08 000000108 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:17:56.630 -08 000000073 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:17:57.000 -08 000000036 INF: FPGA: Recv EX1MV
17-02-28 20:17:57.000 -08 000000036 INF: FPGA: Recv EX2MV
17-02-28 20:17:57.000 -08 000000108 INF: Excitation Filter 1: Moved -107 steps in 371.241 ms
17-02-28 20:17:57.000 -08 000000073 INF: Excitation Filter 2: Moved -107 steps in 371.1626 ms
17-02-28 20:17:57.000 -08 000000073 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.3383 ms
17-02-28 20:17:57.000 -08 000000073 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.4166 ms
17-02-28 20:17:57.000 -08 000000108 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 371.3508 ms
17-02-28 20:17:57.000 -08 000000108 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.8333 ms
17-02-28 20:17:57.001 -08 000000073 INF: ======================================
17-02-28 20:17:57.001 -08 000000108 INF: ======================================
17-02-28 20:17:57.002 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:57.003 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:17:57.004 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:17:57.004 -08 000000053 INF: ===================FPGA Z Wait===================
17-02-28 20:17:57.004 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:17:57.004 -08 000000057 INF: ===================Move Y Motor without settling===================
17-02-28 20:17:57.004 -08 000000057 INF: Y Motor: Moving to 14.8294 mm @6.500 mm/sec, started at 64.4777 mm
17-02-28 20:17:57.004 -08 000000053 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:17:57.004 -08 000000057 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:17:57.004 -08 000000057 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:17:57.004 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:17:57.005 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:17:57.005 -08 000000105 INF: ===================Camera TDI, Parallel===================
17-02-28 20:17:57.006 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:17:57.006 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:17:57.008 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.009 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.009 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.009 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.061 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.061 -08 000000057 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:17:57.061 -08 000000057 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:17:57.122 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.122 -08 000000057 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:17:57.159 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.159 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.159 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.159 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Set target position to 982936 encoder counts
17-02-28 20:17:57.184 -08 000000057 INF: Y Motor: Xmit s r0xca 982936\r
17-02-28 20:17:57.248 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.248 -08 000000057 INF: Y Motor: Start the move command
17-02-28 20:17:57.248 -08 000000057 INF: Y Motor: Xmit t 1\r
17-02-28 20:17:57.309 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.309 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.309 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:17:57.309 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:17:57.310 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:17:57.310 -08 000000057 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:17:57.310 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.370 -08 000000090 INF: FPGA: Recv ZWAIT 
17-02-28 20:17:57.370 -08 000000053 INF: ======================================
17-02-28 20:17:57.433 -08 000000057 INF: Y Motor: Unshifted Position: 5885912
17-02-28 20:17:57.459 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:57.459 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:57.459 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:17:57.459 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:17:57.459 -08 000000081 INF: ===================Camera #2 Frame #5===================
17-02-28 20:17:57.459 -08 000000052 INF: ===================Camera #0 Frame #5===================
17-02-28 20:17:57.483 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.609 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.624 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:57.624 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:57.624 -08 000000052 INF: ===================Camera #0 Frame #11===================
17-02-28 20:17:57.633 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:17:57.633 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:17:57.633 -08 000000081 INF: ===================Camera #2 Frame #11===================
17-02-28 20:17:57.747 -08 000000057 INF: Y Motor: Unshifted Position: 5683765
17-02-28 20:17:57.797 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.799 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:17:57.799 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:17:57.799 -08 000000052 INF: ===================Camera #0 Frame #17===================
17-02-28 20:17:57.809 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:17:57.809 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:17:57.809 -08 000000081 INF: ===================Camera #2 Frame #18===================
17-02-28 20:17:57.920 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:57.972 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:17:57.972 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:17:57.972 -08 000000052 INF: ===================Camera #0 Frame #24===================
17-02-28 20:17:57.981 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:17:57.981 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:17:57.981 -08 000000081 INF: ===================Camera #2 Frame #24===================
17-02-28 20:17:58.058 -08 000000057 INF: Y Motor: Unshifted Position: 5481403
17-02-28 20:17:58.108 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.144 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:58.144 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:58.144 -08 000000052 INF: ===================Camera #0 Frame #30===================
17-02-28 20:17:58.150 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:17:58.150 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:17:58.150 -08 000000081 INF: ===================Camera #2 Frame #30===================
17-02-28 20:17:58.234 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.316 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:58.316 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:58.316 -08 000000052 INF: ===================Camera #0 Frame #36===================
17-02-28 20:17:58.320 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:17:58.320 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:17:58.320 -08 000000081 INF: ===================Camera #2 Frame #36===================
17-02-28 20:17:58.370 -08 000000057 INF: Y Motor: Unshifted Position: 5278385
17-02-28 20:17:58.420 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.492 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:17:58.492 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:17:58.492 -08 000000052 INF: ===================Camera #0 Frame #43===================
17-02-28 20:17:58.499 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:17:58.499 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:17:58.499 -08 000000081 INF: ===================Camera #2 Frame #43===================
17-02-28 20:17:58.546 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.673 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:17:58.673 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:17:58.673 -08 000000052 INF: ===================Camera #0 Frame #49===================
17-02-28 20:17:58.675 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:17:58.675 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:17:58.675 -08 000000081 INF: ===================Camera #2 Frame #50===================
17-02-28 20:17:58.681 -08 000000057 INF: Y Motor: Unshifted Position: 5074286
17-02-28 20:17:58.731 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.847 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:17:58.847 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:17:58.847 -08 000000052 INF: ===================Camera #0 Frame #56===================
17-02-28 20:17:58.850 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:17:58.850 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:17:58.850 -08 000000081 INF: ===================Camera #2 Frame #56===================
17-02-28 20:17:58.857 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:58.995 -08 000000057 INF: Y Motor: Unshifted Position: 4872136
17-02-28 20:17:59.021 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:17:59.021 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:17:59.021 -08 000000081 INF: ===================Camera #2 Frame #62===================
17-02-28 20:17:59.025 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:17:59.025 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:17:59.025 -08 000000052 INF: ===================Camera #0 Frame #62===================
17-02-28 20:17:59.045 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.168 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.199 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:59.199 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:59.199 -08 000000081 INF: ===================Camera #2 Frame #69===================
17-02-28 20:17:59.202 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:17:59.202 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:17:59.202 -08 000000052 INF: ===================Camera #0 Frame #69===================
17-02-28 20:17:59.307 -08 000000057 INF: Y Motor: Unshifted Position: 4669119
17-02-28 20:17:59.357 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.382 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:17:59.382 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:17:59.382 -08 000000081 INF: ===================Camera #2 Frame #76===================
17-02-28 20:17:59.383 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:17:59.383 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:17:59.383 -08 000000052 INF: ===================Camera #0 Frame #76===================
17-02-28 20:17:59.480 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.554 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:17:59.554 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:17:59.554 -08 000000052 INF: ===================Camera #0 Frame #82===================
17-02-28 20:17:59.565 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:17:59.565 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:17:59.565 -08 000000081 INF: ===================Camera #2 Frame #82===================
17-02-28 20:17:59.618 -08 000000057 INF: Y Motor: Unshifted Position: 4466955
17-02-28 20:17:59.668 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.722 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:17:59.722 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:17:59.722 -08 000000052 INF: ===================Camera #0 Frame #88===================
17-02-28 20:17:59.735 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:17:59.735 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:17:59.735 -08 000000081 INF: ===================Camera #2 Frame #89===================
17-02-28 20:17:59.794 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:17:59.891 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:17:59.891 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:17:59.891 -08 000000052 INF: ===================Camera #0 Frame #94===================
17-02-28 20:17:59.907 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:17:59.907 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:17:59.907 -08 000000081 INF: ===================Camera #2 Frame #95===================
17-02-28 20:17:59.929 -08 000000057 INF: Y Motor: Unshifted Position: 4262644
17-02-28 20:17:59.979 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.060 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:18:00.060 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:18:00.060 -08 000000052 INF: ===================Camera #0 Frame #101===================
17-02-28 20:18:00.077 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:18:00.077 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:18:00.077 -08 000000081 INF: ===================Camera #2 Frame #101===================
17-02-28 20:18:00.105 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.232 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:18:00.232 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:18:00.232 -08 000000052 INF: ===================Camera #0 Frame #107===================
17-02-28 20:18:00.243 -08 000000057 INF: Y Motor: Unshifted Position: 4059187
17-02-28 20:18:00.247 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:18:00.247 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:18:00.247 -08 000000081 INF: ===================Camera #2 Frame #107===================
17-02-28 20:18:00.293 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.402 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:18:00.402 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:18:00.402 -08 000000052 INF: ===================Camera #0 Frame #113===================
17-02-28 20:18:00.416 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.416 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:18:00.416 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:18:00.416 -08 000000081 INF: ===================Camera #2 Frame #114===================
17-02-28 20:18:00.554 -08 000000057 INF: Y Motor: Unshifted Position: 3858122
17-02-28 20:18:00.573 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:18:00.573 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:18:00.573 -08 000000052 INF: ===================Camera #0 Frame #119===================
17-02-28 20:18:00.589 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:18:00.589 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:18:00.589 -08 000000081 INF: ===================Camera #2 Frame #120===================
17-02-28 20:18:00.604 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.730 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.744 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:18:00.744 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:18:00.744 -08 000000052 INF: ===================Camera #0 Frame #126===================
17-02-28 20:18:00.759 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:18:00.759 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:18:00.759 -08 000000081 INF: ===================Camera #2 Frame #126===================
17-02-28 20:18:00.865 -08 000000057 INF: Y Motor: Unshifted Position: 3654022
17-02-28 20:18:00.915 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:00.918 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:18:00.918 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:18:00.918 -08 000000052 INF: ===================Camera #0 Frame #132===================
17-02-28 20:18:00.929 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:18:00.929 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:18:00.929 -08 000000081 INF: ===================Camera #2 Frame #133===================
17-02-28 20:18:01.041 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.090 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:18:01.090 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:18:01.090 -08 000000052 INF: ===================Camera #0 Frame #138===================
17-02-28 20:18:01.102 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:18:01.102 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:18:01.102 -08 000000081 INF: ===================Camera #2 Frame #139===================
17-02-28 20:18:01.179 -08 000000057 INF: Y Motor: Unshifted Position: 3451648
17-02-28 20:18:01.229 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.261 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:18:01.261 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:18:01.261 -08 000000052 INF: ===================Camera #0 Frame #145===================
17-02-28 20:18:01.271 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:18:01.271 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:18:01.271 -08 000000081 INF: ===================Camera #2 Frame #145===================
17-02-28 20:18:01.353 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.432 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:18:01.432 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:18:01.432 -08 000000052 INF: ===================Camera #0 Frame #151===================
17-02-28 20:18:01.440 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:18:01.440 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:18:01.440 -08 000000081 INF: ===================Camera #2 Frame #151===================
17-02-28 20:18:01.492 -08 000000057 INF: Y Motor: Unshifted Position: 3248857
17-02-28 20:18:01.542 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.602 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:18:01.602 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:18:01.602 -08 000000052 INF: ===================Camera #0 Frame #157===================
17-02-28 20:18:01.609 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:18:01.609 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:18:01.609 -08 000000081 INF: ===================Camera #2 Frame #158===================
17-02-28 20:18:01.664 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.772 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:18:01.772 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:18:01.772 -08 000000052 INF: ===================Camera #0 Frame #164===================
17-02-28 20:18:01.781 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:18:01.781 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:18:01.781 -08 000000081 INF: ===================Camera #2 Frame #164===================
17-02-28 20:18:01.802 -08 000000057 INF: Y Motor: Unshifted Position: 3045845
17-02-28 20:18:01.852 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:01.945 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:18:01.945 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:18:01.945 -08 000000052 INF: ===================Camera #0 Frame #170===================
17-02-28 20:18:01.950 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:18:01.950 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:18:01.950 -08 000000081 INF: ===================Camera #2 Frame #170===================
17-02-28 20:18:01.975 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.115 -08 000000057 INF: Y Motor: Unshifted Position: 2842400
17-02-28 20:18:02.115 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:18:02.115 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:18:02.115 -08 000000052 INF: ===================Camera #0 Frame #176===================
17-02-28 20:18:02.119 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:18:02.119 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:18:02.119 -08 000000081 INF: ===================Camera #2 Frame #176===================
17-02-28 20:18:02.165 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.283 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:18:02.283 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:18:02.283 -08 000000052 INF: ===================Camera #0 Frame #182===================
17-02-28 20:18:02.288 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:18:02.288 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:18:02.288 -08 000000081 INF: ===================Camera #2 Frame #183===================
17-02-28 20:18:02.289 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.426 -08 000000057 INF: Y Motor: Unshifted Position: 2640680
17-02-28 20:18:02.451 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:18:02.451 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:18:02.451 -08 000000052 INF: ===================Camera #0 Frame #189===================
17-02-28 20:18:02.464 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:18:02.464 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:18:02.464 -08 000000081 INF: ===================Camera #2 Frame #189===================
17-02-28 20:18:02.476 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.599 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.622 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:18:02.622 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:18:02.622 -08 000000052 INF: ===================Camera #0 Frame #195===================
17-02-28 20:18:02.636 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:18:02.636 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:18:02.636 -08 000000081 INF: ===================Camera #2 Frame #195===================
17-02-28 20:18:02.737 -08 000000057 INF: Y Motor: Unshifted Position: 2436590
17-02-28 20:18:02.787 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.792 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:18:02.792 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:18:02.792 -08 000000052 INF: ===================Camera #0 Frame #201===================
17-02-28 20:18:02.805 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:18:02.805 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:18:02.805 -08 000000081 INF: ===================Camera #2 Frame #202===================
17-02-28 20:18:02.913 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:02.962 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:18:02.962 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:18:02.962 -08 000000052 INF: ===================Camera #0 Frame #207===================
17-02-28 20:18:02.977 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:18:02.977 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:18:02.977 -08 000000081 INF: ===================Camera #2 Frame #208===================
17-02-28 20:18:03.051 -08 000000057 INF: Y Motor: Unshifted Position: 2234220
17-02-28 20:18:03.101 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.132 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:18:03.132 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:18:03.132 -08 000000052 INF: ===================Camera #0 Frame #214===================
17-02-28 20:18:03.146 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:18:03.146 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:18:03.146 -08 000000081 INF: ===================Camera #2 Frame #214===================
17-02-28 20:18:03.224 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.305 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:18:03.305 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:18:03.305 -08 000000052 INF: ===================Camera #0 Frame #220===================
17-02-28 20:18:03.314 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:18:03.314 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:18:03.314 -08 000000081 INF: ===================Camera #2 Frame #220===================
17-02-28 20:18:03.362 -08 000000057 INF: Y Motor: Unshifted Position: 2031851
17-02-28 20:18:03.412 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.475 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:18:03.475 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:18:03.475 -08 000000052 INF: ===================Camera #0 Frame #226===================
17-02-28 20:18:03.483 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:18:03.483 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:18:03.483 -08 000000081 INF: ===================Camera #2 Frame #227===================
17-02-28 20:18:03.535 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.645 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:18:03.645 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:18:03.646 -08 000000052 INF: ===================Camera #0 Frame #233===================
17-02-28 20:18:03.655 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:18:03.655 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:18:03.655 -08 000000081 INF: ===================Camera #2 Frame #233===================
17-02-28 20:18:03.673 -08 000000057 INF: Y Motor: Unshifted Position: 1827743
17-02-28 20:18:03.723 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.819 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:18:03.819 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:18:03.819 -08 000000052 INF: ===================Camera #0 Frame #239===================
17-02-28 20:18:03.824 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:18:03.824 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:18:03.824 -08 000000081 INF: ===================Camera #2 Frame #239===================
17-02-28 20:18:03.849 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:03.987 -08 000000057 INF: Y Motor: Unshifted Position: 1625600
17-02-28 20:18:03.989 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:18:03.989 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:18:03.989 -08 000000052 INF: ===================Camera #0 Frame #245===================
17-02-28 20:18:03.993 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:18:03.993 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:18:03.993 -08 000000081 INF: ===================Camera #2 Frame #245===================
17-02-28 20:18:04.037 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.159 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:18:04.159 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:18:04.159 -08 000000052 INF: ===================Camera #0 Frame #251===================
17-02-28 20:18:04.161 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.162 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:18:04.162 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:18:04.162 -08 000000081 INF: ===================Camera #2 Frame #252===================
17-02-28 20:18:04.299 -08 000000057 INF: Y Motor: Unshifted Position: 1423228
17-02-28 20:18:04.331 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:18:04.331 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:18:04.331 -08 000000052 INF: ===================Camera #0 Frame #258===================
17-02-28 20:18:04.334 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:18:04.334 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:18:04.334 -08 000000081 INF: ===================Camera #2 Frame #258===================
17-02-28 20:18:04.349 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.472 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.503 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:18:04.503 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:18:04.503 -08 000000081 INF: ===================Camera #2 Frame #264===================
17-02-28 20:18:04.504 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:18:04.504 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:18:04.504 -08 000000052 INF: ===================Camera #0 Frame #264===================
17-02-28 20:18:04.610 -08 000000057 INF: Y Motor: Unshifted Position: 1220209
17-02-28 20:18:04.660 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.672 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:18:04.672 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:18:04.672 -08 000000081 INF: ===================Camera #2 Frame #270===================
17-02-28 20:18:04.675 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:18:04.675 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:18:04.675 -08 000000052 INF: ===================Camera #0 Frame #270===================
17-02-28 20:18:04.731 -08 000000073 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:04.731 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:04.733 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:04.734 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:04.734 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:04.734 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:04.734 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:04.734 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:04.734 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:04.734 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:04.734 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:04.734 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:04.735 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:04.783 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:04.842 -08 000000081 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:04.842 -08 000000081 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:04.842 -08 000000081 INF: ===================Camera #2 Frame #272===================
17-02-28 20:18:04.846 -08 000000052 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:04.846 -08 000000052 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:04.846 -08 000000052 INF: ===================Camera #0 Frame #272===================
17-02-28 20:18:04.849 -08 000000081 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:04.849 -08 000000081 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:04.853 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:04.854 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:04.921 -08 000000057 INF: Y Motor: Unshifted Position: 1016108
17-02-28 20:18:04.971 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:05.014 -08 000000081 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:05.014 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:18:05.051 -08 000000081 INF: ======================================
17-02-28 20:18:05.107 -08 000000064 INF: FPGA: Recv EX2MV
17-02-28 20:18:05.107 -08 000000064 INF: FPGA: Recv EX1MV
17-02-28 20:18:05.107 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 372.7201 ms
17-02-28 20:18:05.107 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 372.9411 ms
17-02-28 20:18:05.107 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.8886 ms
17-02-28 20:18:05.107 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.0482 ms
17-02-28 20:18:05.107 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1798 ms
17-02-28 20:18:05.107 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.0027 ms
17-02-28 20:18:05.107 -08 000000082 INF: ======================================
17-02-28 20:18:05.108 -08 000000050 INF: ======================================
17-02-28 20:18:05.109 -08 000000057 INF: Y Motor: Unshifted Position: 982935
17-02-28 20:18:05.109 -08 000000057 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:05.109 -08 000000057 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:05.109 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:05.110 -08 000000039 INF: ======================================
17-02-28 20:18:05.146 -08 000000052 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:05.146 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:18:05.171 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:18:05.171 -08 000000057 INF: Y Motor: Moved to 14.8294 after 7861 ms
17-02-28 20:18:05.171 -08 000000057 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:05.177 -08 000000052 INF: ======================================
17-02-28 20:18:05.178 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:18:05.179 -08 000000105 INF: ======================================
17-02-28 20:18:05.235 -08 000000057 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:05.235 -08 000000057 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:05.235 -08 000000057 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:05.295 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:18:05.295 -08 000000057 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:05.295 -08 000000057 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:05.360 -08 000000057 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: Recv v 0\r
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:05.421 -08 000000057 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:05.483 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:18:05.483 -08 000000057 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:05.483 -08 000000057 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:05.547 -08 000000057 INF: Y Motor: Recv ok\r
17-02-28 20:18:05.547 -08 000000057 INF: ======================================
17-02-28 20:18:05.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:05.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:05.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.550 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:05.609 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:05.610 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:05.668 -08 000000087 INF: FPGA: Recv TDIYERD 1482937
17-02-28 20:18:05.668 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:05.730 -08 000000053 INF: FPGA: Recv ZADCR 16265
17-02-28 20:18:05.730 -08 000000018 INF: At scan end Y pos = 14.829 and Z pos = -0.063. Y moved -48.539 mm
17-02-28 20:18:05.730 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:05.792 -08 000000081 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:18:05.792 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:18:05.792 -08 000000018 INF: TDIScan finished after 12623.3801 ms
17-02-28 20:18:05.792 -08 000000018 INF: Image[0]: Y should trigger at 63.368 mm, 2nd row was at 64.277 mm (error = 0.909 mm)
17-02-28 20:18:05.792 -08 000000018 INF: Image[2]: Y should trigger at 63.368 mm, 2nd row was at 64.277 mm (error = 0.909 mm)
17-02-28 20:18:05.804 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.836 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.722 um
17-02-28 20:18:05.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.837 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:05.856 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:05.856 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:05.857 -08 000000082 INF: ===================Dither Clean Up Command===================
17-02-28 20:18:05.857 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:05.857 -08 000000050 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:05.857 -08 000000010 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:05.858 -08 000000010 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:05.858 -08 000000010 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:05.858 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:05.858 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:05.858 -08 000000050 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:05.858 -08 000000050 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:05.858 -08 000000087 INF: ======================================
17-02-28 20:18:05.859 -08 000000072 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:18:05.861 -08 000000064 INF: ===================LFT:Extracting coords===================
17-02-28 20:18:05.886 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:05.887 -08 000000064 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:18:05.888 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:18:05.888 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.888 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.888 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.889 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:05.918 -08 000000060 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:05.918 -08 000000060 INF: FPGA: Recv ZSEL 
17-02-28 20:18:05.918 -08 000000072 INF: FPGA: Xmit ZDACW 17851\n
17-02-28 20:18:05.918 -08 000000010 INF: ======================================
17-02-28 20:18:05.920 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:18:05.920 -08 000000050 INF: ======================================
17-02-28 20:18:05.964 -08 000000038 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.964 -08 000000057 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.964 -08 000000105 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.974 -08 000000081 INF: FC:A, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:05.979 -08 000000073 INF: FPGA: Recv ZDACW 
17-02-28 20:18:05.979 -08 000000072 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:18:05.980 -08 000000072 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:18:06.044 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:18:06.044 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:06.045 -08 000000072 INF: ======================================
17-02-28 20:18:06.116 -08 000000038 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:18:06.116 -08 000000057 INF: LFT found best fwhm score 2.001091 in 152 ms
17-02-28 20:18:06.116 -08 000000038 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0473133401883855 in the next cycle, cycle 4 FC:A, C:3,L:2,B
17-02-28 20:18:06.116 -08 000000057 INF: LFT found good score at index 217 with fwhm value 2.001091. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:18:06.116 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.116 -08 000000105 INF: LFT found best fwhm score 2.000179 in 152 ms
17-02-28 20:18:06.116 -08 000000105 INF: LFT found good score at index 1201 with fwhm value 2.000179. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:18:06.116 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.116 -08 000000057 INF: ======================================
17-02-28 20:18:06.116 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.117 -08 000000038 INF: ======================================
17-02-28 20:18:06.117 -08 000000105 INF: ======================================
17-02-28 20:18:06.142 -08 000000081 INF: LFT found best fwhm score 2.000525 in 168 ms
17-02-28 20:18:06.142 -08 000000081 INF: LFT found good score at index 1669 with fwhm value 2.000525. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:2,B
17-02-28 20:18:06.142 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:18:06.143 -08 000000081 INF: ======================================
17-02-28 20:18:06.144 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:06.145 -08 000000064 INF: LFT weighted average best Z for bottom surface is at -0.048mm FC:A, C:3,L:2,B
17-02-28 20:18:06.145 -08 000000064 INF: ======================================
17-02-28 20:18:06.146 -08 000000082 INF: ======================================
17-02-28 20:18:06.147 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:06.148 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:06.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:18:06.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 9.440335 Y = 39.70494===================
17-02-28 20:18:06.151 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:18:06.151 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:18:06.173 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:18:06.174 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:18:06.174 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.174 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:18:06.174 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:18:06.175 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:18:06.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:18:06.224 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.226 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.227 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:06.227 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:06.234 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":2,"Tile":2201,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF244","HCSMMF242","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.271 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:06.273 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.274 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:06.274 -08 000000018 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:06.275 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.279 -08 000000052 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:06.279 -08 000000052 INF: ======================================
17-02-28 20:18:06.280 -08 000000090 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:06.280 -08 000000090 INF: ======================================
17-02-28 20:18:06.281 -08 000000052 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:06.281 -08 000000052 INF: ======================================
17-02-28 20:18:06.282 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.284 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:06.400 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":2,"Tile":2203,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF196","HCSMMF217","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.400 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:18:06.403 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":2,"Tile":2205,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF284","HCSMMF275","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.406 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":2,"Tile":2206,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF176","HCSMMF249","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.408 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":2,"Tile":2204,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF194","HCSMMF268","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.417 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":2,"Tile":2208,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF221","HCSMMF195","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.418 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:18:06.418 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:06.418 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:06.419 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":2,"Tile":2210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF197","HCSMMF272","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.420 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.420 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":2,"Tile":2211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF207","HCSMMF262","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.421 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.422 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":2,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF260","HCSMMF198","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.424 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":2,"Tile":2202,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF205","HCSMMF215","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.428 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:18:06.429 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:18:06.429 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:18:06.451 -08 000000082 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:06.453 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.453 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:06.453 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0681 mm
17-02-28 20:18:06.454 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:06.474 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":2,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF271","HCSMMF240","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.475 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":2,"Tile":2213,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF282","HCSMMF178","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.476 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":2,"Tile":2209,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF273","HCSMMF248","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.477 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":2,"Tile":2214,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF192","HCSMMF210","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.477 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":2,"Tile":2218,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF184","HCSMMF188","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.478 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":2,"Tile":2216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF228","HCSMMF213","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.479 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":2,"Tile":2217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF264","HCSMMF227","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.480 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":2,"Tile":2219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF279","HCSMMF266","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.481 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":2,"Tile":2223,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF216","HCSMMF189","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.482 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":2,"Tile":2222,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF261","HCSMMF270","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.488 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":2,"Tile":2226,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF254","HCSMMF237","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.489 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":2,"Tile":2224,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF185","HCSMMF234","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.490 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":2,"Tile":2225,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF186","HCSMMF182","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.491 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":2,"Tile":2215,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF287","HCSMMF212","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.492 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":2,"Tile":2227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF219","HCSMMF201","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.493 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":2,"Tile":2228,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF256","HCSMMF231","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.494 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":2,"Tile":2220,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF269","HCSMMF286","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.496 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":2,"Tile":2221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF274","HCSMMF280","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:06.504 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.510 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:18:06.513 -08 000000051 INF: FPGA: Recv ZTRG 
17-02-28 20:18:06.513 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:06.575 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:18:06.575 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:06.575 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:18:06.599 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.600 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:18:06.637 -08 000000036 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:06.637 -08 000000036 INF: FPGA: Recv ZMV 
17-02-28 20:18:06.637 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:06.637 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9283 ms
17-02-28 20:18:06.637 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:06.638 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.644 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:18:06.699 -08 000000105 INF: FPGA: Recv ZDACR 60292
17-02-28 20:18:06.699 -08 000000018 INF: Z Motor: MoveAndTrigger took 245.8071 ms w/comms
17-02-28 20:18:06.699 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:06.699 -08 000000018 INF: Z Motor: MoveAbsStepped took 245.9998 ms
17-02-28 20:18:06.700 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.700 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.709 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:18:06.709 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:18:06.741 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.746 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:18:06.761 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:06.782 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:06.782 -08 000000018 INF: Transformed XStagePosition from 11.66893 mm to 11.6689300537109 mm.
17-02-28 20:18:06.790 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:06.790 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.790 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:06.793 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:18:06.793 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:06.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:06.795 -08 000000057 INF: ===================Move X,Y===================
17-02-28 20:18:06.795 -08 000000035 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:06.796 -08 000000057 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:06.796 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:06.796 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:06.796 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:06.796 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:06.797 -08 000000087 INF: ===================Move X Motor without settling===================
17-02-28 20:18:06.797 -08 000000073 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:06.797 -08 000000087 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:06.797 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:06.797 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:06.797 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:06.797 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:06.798 -08 000000073 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8294 mm
17-02-28 20:18:06.798 -08 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:06.798 -08 000000073 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:06.798 -08 000000053 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:06.798 -08 000000077 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:06.798 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:06.798 -08 000000060 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:06.798 -08 000000053 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:06.798 -08 000000034 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:06.798 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:06.799 -08 000000034 INF: ======================================
17-02-28 20:18:06.799 -08 000000053 INF: ======================================
17-02-28 20:18:06.799 -08 000000025 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:06.799 -08 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:06.799 -08 000000038 INF: ======================================
17-02-28 20:18:06.799 -08 000000090 INF: ======================================
17-02-28 20:18:06.799 -08 000000060 INF: ======================================
17-02-28 20:18:06.800 -08 000000025 INF: ======================================
17-02-28 20:18:06.801 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:06.801 -08 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:06.801 -08 000000077 INF: ======================================
17-02-28 20:18:06.801 -08 000000081 INF: ======================================
17-02-28 20:18:06.802 -08 000000047 INF: ======================================
17-02-28 20:18:06.802 -08 000000086 INF: ======================================
17-02-28 20:18:06.803 -08 000000109 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:06.803 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:06.804 -08 000000109 INF: ======================================
17-02-28 20:18:06.804 -08 000000089 INF: ======================================
17-02-28 20:18:06.805 -08 000000035 INF: ======================================
17-02-28 20:18:06.833 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.838 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:18:06.887 -08 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:06.887 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:06.887 -08 000000073 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:06.887 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:06.887 -08 000000087 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:06.931 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:06.952 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:06.952 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Moving to 11.6689 mm @15.000 mm/sec, started at 9.4639 mm
17-02-28 20:18:06.952 -08 000000087 INF: X Motor: Xmit MA -19387\n
17-02-28 20:18:07.015 -08 000000087 INF: X Motor: Recv MA -19387\r\n>
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:07.015 -08 000000087 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:18:07.015 -08 000000073 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:18:07.076 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:07.076 -08 000000073 INF: Y Motor: Start the move command
17-02-28 20:18:07.076 -08 000000073 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:07.139 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:07.139 -08 000000073 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:18:07.139 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.252 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:18:07.263 -08 000000073 INF: Y Motor: Unshifted Position: 1065715
17-02-28 20:18:07.313 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.437 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.575 -08 000000073 INF: Y Motor: Unshifted Position: 1767105
17-02-28 20:18:07.625 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.636 -08 000000087 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:07.698 -08 000000087 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:07.698 -08 000000087 INF: X Motor: Moved to 11.6685 after 683 ms
17-02-28 20:18:07.698 -08 000000087 INF: ======================================
17-02-28 20:18:07.748 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:07.889 -08 000000073 INF: Y Motor: Unshifted Position: 2552948
17-02-28 20:18:07.939 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.061 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.197 -08 000000073 INF: Y Motor: Unshifted Position: 3332896
17-02-28 20:18:08.247 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.373 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.509 -08 000000073 INF: Y Motor: Unshifted Position: 4108801
17-02-28 20:18:08.559 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.684 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.826 -08 000000073 INF: Y Motor: Unshifted Position: 4894569
17-02-28 20:18:08.876 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:08.997 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:09.133 -08 000000073 INF: Y Motor: Unshifted Position: 5668426
17-02-28 20:18:09.183 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:09.316 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:09.445 -08 000000073 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:18:09.445 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:09.445 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:09.512 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:09.512 -08 000000073 INF: Y Motor: Moved to 64.4706 after 2373 ms
17-02-28 20:18:09.512 -08 000000073 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:09.570 -08 000000073 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:09.570 -08 000000073 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:09.570 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:09.635 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:09.635 -08 000000073 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:09.635 -08 000000073 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:09.699 -08 000000073 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:09.761 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:09.821 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:09.821 -08 000000073 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:09.821 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:09.883 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:18:09.883 -08 000000073 INF: ======================================
17-02-28 20:18:09.884 -08 000000057 INF: ===================Move X,Y===================
17-02-28 20:18:09.885 -08 000000057 INF: ======================================
17-02-28 20:18:09.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:09.887 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:09.887 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:18:09.888 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:18:09.945 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:09.945 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:18:10.007 -08 000000087 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:10.008 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:10.008 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:10.008 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:10.067 -08 000000081 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:18:10.067 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:18:10.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:10.068 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:10.069 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.069 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:10.070 -08 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:10.070 -08 000000058 INF: ======================================
17-02-28 20:18:10.070 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.072 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:10.072 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:10.072 -08 000000045 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:18:10.133 -08 000000101 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:10.133 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:10.135 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:10.135 -08 000000045 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:18:10.192 -08 000000047 INF: FPGA: Recv TDIYARM2
17-02-28 20:18:10.192 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:10.194 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.195 -08 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:10.195 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.197 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:10.198 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:10.198 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:10.565 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:10.565 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:10.565 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:10.582 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:10.584 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:10.965 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:10.965 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:10.965 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:10.980 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:10.983 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:10.985 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:10.987 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:10.988 -08 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:10.989 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:10.991 -08 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:10.991 -08 000000045 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:10.991 -08 000000045 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:18:10.991 -08 000000045 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:18:11.069 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:18:11.069 -08 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:18:11.069 -08 000000045 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:18:11.128 -08 000000052 INF: FPGA: Recv ZARM
17-02-28 20:18:11.128 -08 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.8512 ms
17-02-28 20:18:11.128 -08 000000045 INF: Z Motor: ArmAbsStepped took 136.5872 ms
17-02-28 20:18:11.128 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:11.130 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:18:11.131 -08 000000045 INF: ======================================
17-02-28 20:18:11.132 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:11.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:11.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.134 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.135 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:11.135 -08 000000047 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:11.135 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:11.135 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:11.135 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:11.135 -08 000000047 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:11.135 -08 000000047 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:11.135 -08 000000047 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:11.135 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:11.136 -08 000000047 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:11.503 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:18:11.503 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:18:11.503 -08 000000047 INF: Excitation Filter 1: Moved -107 steps in 368.0654 ms
17-02-28 20:18:11.503 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 368.2308 ms
17-02-28 20:18:11.503 -08 000000047 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2685 ms
17-02-28 20:18:11.503 -08 000000047 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.4517 ms
17-02-28 20:18:11.504 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4445 ms
17-02-28 20:18:11.504 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.6889 ms
17-02-28 20:18:11.504 -08 000000078 INF: ======================================
17-02-28 20:18:11.504 -08 000000047 INF: ======================================
17-02-28 20:18:11.505 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.507 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:11.507 -08 000000069 INF: ===================Serial===================
17-02-28 20:18:11.507 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:18:11.508 -08 000000010 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:11.508 -08 000000010 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:18:11.508 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:11.508 -08 000000010 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:11.508 -08 000000010 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:11.508 -08 000000069 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:18:11.508 -08 000000081 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:11.508 -08 000000069 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:11.509 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:11.509 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:11.509 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:18:11.510 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.510 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.511 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.511 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.513 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:11.567 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.567 -08 000000010 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:11.567 -08 000000010 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:11.629 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.629 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:11.660 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.660 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.661 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.661 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:18:11.695 -08 000000010 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:18:11.754 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.754 -08 000000010 INF: Y Motor: Start the move command
17-02-28 20:18:11.754 -08 000000010 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:11.810 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.810 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.811 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.811 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.816 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:11.816 -08 000000010 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:18:11.816 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:11.943 -08 000000010 INF: Y Motor: Unshifted Position: 5928636
17-02-28 20:18:11.960 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.960 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.961 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:11.961 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:11.993 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.110 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:12.110 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:12.110 -08 000000057 INF: ===================Camera #2 Frame #1===================
17-02-28 20:18:12.111 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:12.111 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:12.111 -08 000000101 INF: ===================Camera #0 Frame #1===================
17-02-28 20:18:12.118 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.253 -08 000000010 INF: Y Motor: Unshifted Position: 5882082
17-02-28 20:18:12.263 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:12.263 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:12.263 -08 000000057 INF: ===================Camera #2 Frame #3===================
17-02-28 20:18:12.265 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:12.265 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:12.265 -08 000000101 INF: ===================Camera #0 Frame #3===================
17-02-28 20:18:12.303 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.423 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:12.423 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:12.423 -08 000000057 INF: ===================Camera #2 Frame #4===================
17-02-28 20:18:12.424 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:12.424 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:12.424 -08 000000101 INF: ===================Camera #0 Frame #4===================
17-02-28 20:18:12.428 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.566 -08 000000010 INF: Y Motor: Unshifted Position: 5835079
17-02-28 20:18:12.578 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:12.578 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:12.578 -08 000000057 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:12.579 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:12.579 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:12.579 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:12.616 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.626 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:12.626 -08 000000069 INF: ===================Serial===================
17-02-28 20:18:12.628 -08 000000069 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:18:12.628 -08 000000069 INF: ===================Serial===================
17-02-28 20:18:12.629 -08 000000069 INF: ======================================
17-02-28 20:18:12.688 -08 000000053 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:12.688 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:12.690 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:12.691 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:12.691 -08 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:12.691 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:12.691 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:12.691 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:12.691 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:12.691 -08 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:12.692 -08 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:12.692 -08 000000058 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:12.693 -08 000000058 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:12.731 -08 000000057 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:12.731 -08 000000057 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:12.731 -08 000000057 INF: ===================Camera #2 Frame #6===================
17-02-28 20:18:12.732 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:12.732 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:12.732 -08 000000101 INF: ===================Camera #0 Frame #6===================
17-02-28 20:18:12.734 -08 000000057 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:12.735 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:12.735 -08 000000057 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:12.736 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:12.740 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:12.760 -08 000000057 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:12.760 -08 000000057 INF: ===================Camera TDI===================
17-02-28 20:18:12.761 -08 000000057 INF: ======================================
17-02-28 20:18:12.784 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:12.784 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:12.785 -08 000000101 INF: ======================================
17-02-28 20:18:12.786 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:18:12.788 -08 000000081 INF: ======================================
17-02-28 20:18:12.879 -08 000000010 INF: Y Motor: Unshifted Position: 5790760
17-02-28 20:18:12.929 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:13.063 -08 000000109 INF: FPGA: Recv EX2MV
17-02-28 20:18:13.063 -08 000000109 INF: FPGA: Recv EX1MV
17-02-28 20:18:13.063 -08 000000058 INF: Excitation Filter 1: Moved 107 steps in 371.6478 ms
17-02-28 20:18:13.063 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 371.8678 ms
17-02-28 20:18:13.063 -08 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.866 ms
17-02-28 20:18:13.063 -08 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0203 ms
17-02-28 20:18:13.064 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0689 ms
17-02-28 20:18:13.064 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.283 ms
17-02-28 20:18:13.064 -08 000000058 INF: ======================================
17-02-28 20:18:13.064 -08 000000051 INF: ======================================
17-02-28 20:18:13.065 -08 000000010 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:18:13.065 -08 000000010 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:13.065 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:13.066 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:13.067 -08 000000085 INF: ======================================
17-02-28 20:18:13.127 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:13.127 -08 000000010 INF: Y Motor: Moved to 62.9074 after 1311 ms
17-02-28 20:18:13.127 -08 000000010 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:13.189 -08 000000010 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:13.189 -08 000000010 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:13.189 -08 000000010 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:13.254 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:13.254 -08 000000010 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:13.254 -08 000000010 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:13.316 -08 000000010 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: Recv v 0\r
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:13.378 -08 000000010 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:13.440 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:13.440 -08 000000010 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:13.440 -08 000000010 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:13.503 -08 000000010 INF: Y Motor: Recv ok\r
17-02-28 20:18:13.503 -08 000000010 INF: ======================================
17-02-28 20:18:13.504 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:13.505 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:13.506 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.506 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:13.564 -08 000000108 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:13.564 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:13.626 -08 000000053 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:18:13.626 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:13.688 -08 000000030 INF: FPGA: Recv ZADCR 2423
17-02-28 20:18:13.688 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:18:13.688 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:13.753 -08 000000058 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:18:13.753 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:18:13.753 -08 000000018 INF: TDIScan finished after 6971.4415 ms
17-02-28 20:18:13.753 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:13.753 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:13.753 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:13.812 -08 000000057 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:13.813 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.813 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.814 -08 000000082 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:13.814 -08 000000025 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:13.815 -08 000000036 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:13.815 -08 000000082 INF: ======================================
17-02-28 20:18:13.815 -08 000000025 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:13.815 -08 000000025 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:13.815 -08 000000036 INF: ======================================
17-02-28 20:18:13.876 -08 000000025 INF: Y Motor: Recv ok\r
17-02-28 20:18:13.876 -08 000000025 INF: ======================================
17-02-28 20:18:13.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.879 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:13.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:13.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:13.950 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:14.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:14.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:14.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:14.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.036 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.037 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:18:14.044 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.045 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:18:14.045 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:18:14.673 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:18:14.696 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0488909731552131Best Z position at top surface = -0.120294557529975Best Z position at top surface + compensator offset = -0.0975945575299754 C:3,L:3,B
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.120294557529975
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72284
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0488909731552131
17-02-28 20:18:14.697 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.37886
17-02-28 20:18:14.697 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0488909731552131.
17-02-28 20:18:14.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.830 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:14.830 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:14.872 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:14.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:18:14.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.874 -08 000000018 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:14.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.876 -08 000000073 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:14.876 -08 000000047 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:14.876 -08 000000090 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:14.876 -08 000000073 INF: ======================================
17-02-28 20:18:14.876 -08 000000047 INF: ======================================
17-02-28 20:18:14.876 -08 000000090 INF: ======================================
17-02-28 20:18:14.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.879 -08 000000018 INF: ETF Best Z: -0.04889097 mm (12816 DAC)
17-02-28 20:18:14.879 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.880 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:14.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.881 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:14.887 -08 000000018 INF: Swath 1 position calculated to be: {X=11.09733, Y=39.70494} from estimated center X= 11.592, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:14.887 -08 000000018 INF: Swath 2 position calculated to be: {X=12.20533, Y=39.70494} from estimated center X= 11.592, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:15.312 -08 000000018 INF: Swath 0: Converted transform from (102.3501, -49.11802) pixels to (0.03519, -0.016905) mm.
17-02-28 20:18:15.318 -08 000000018 INF: Swath 1: Converted transform from (72.16796, -45.03579) pixels to (0.02484, -0.015525) mm.
17-02-28 20:18:15.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:15.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:15.319 -08 000000018 INF: Transformed XStagePosition from 11.09733 mm to 11.1325248628855 mm.
17-02-28 20:18:15.330 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4780407393128 mm.
17-02-28 20:18:15.330 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2780407393128 mm.
17-02-28 20:18:15.330 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3687907393128 mm.
17-02-28 20:18:15.332 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:15.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:15.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:15.333 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:18:15.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:15.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:15.340 -08 000000034 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:15.340 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:18:15.340 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:15.341 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:15.341 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:15.341 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:15.341 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:15.341 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:18:15.341 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:15.341 -08 000000072 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:15.341 -08 000000072 INF: Z Motor: Moving to -0.0689 mm, started at -0.0100 mm
17-02-28 20:18:15.342 -08 000000072 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:15.342 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:15.342 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:15.342 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:15.342 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:15.343 -08 000000078 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:15.343 -08 000000064 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:15.343 -08 000000081 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:15.343 -08 000000075 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:15.343 -08 000000035 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:15.343 -08 000000066 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:15.343 -08 000000105 INF: ======================================
17-02-28 20:18:15.344 -08 000000052 INF: ======================================
17-02-28 20:18:15.344 -08 000000075 INF: ======================================
17-02-28 20:18:15.344 -08 000000066 INF: ======================================
17-02-28 20:18:15.344 -08 000000078 INF: ======================================
17-02-28 20:18:15.344 -08 000000035 INF: ======================================
17-02-28 20:18:15.345 -08 000000025 INF: ===================Move X Motor without settling===================
17-02-28 20:18:15.345 -08 000000036 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:15.345 -08 000000025 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:15.345 -08 000000036 INF: Y Motor: Moving to 64.4780 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:18:15.345 -08 000000036 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:15.345 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:15.345 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:15.346 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:15.346 -08 000000064 INF: ======================================
17-02-28 20:18:15.346 -08 000000081 INF: ======================================
17-02-28 20:18:15.346 -08 000000069 INF: ======================================
17-02-28 20:18:15.347 -08 000000047 INF: ======================================
17-02-28 20:18:15.347 -08 000000045 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:15.347 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:15.348 -08 000000045 INF: ======================================
17-02-28 20:18:15.348 -08 000000073 INF: ======================================
17-02-28 20:18:15.349 -08 000000034 INF: ======================================
17-02-28 20:18:15.358 -08 000000039 INF: FPGA: Recv ZTRG 
17-02-28 20:18:15.358 -08 000000072 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:15.420 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:18:15.420 -08 000000072 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:15.420 -08 000000072 INF: FPGA: Xmit ZMV 18059\n
17-02-28 20:18:15.422 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.422 -08 000000036 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:15.422 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:15.422 -08 000000025 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:15.423 -08 000000025 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:15.482 -08 000000077 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:15.482 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:15.484 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:15.484 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Moving to 11.1325 mm @15.000 mm/sec, started at 11.6685 mm
17-02-28 20:18:15.484 -08 000000025 INF: X Motor: Xmit MA -19607\n
17-02-28 20:18:15.545 -08 000000073 INF: FPGA: Recv ZMV 
17-02-28 20:18:15.545 -08 000000072 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.9443 ms
17-02-28 20:18:15.545 -08 000000072 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:15.547 -08 000000025 INF: X Motor: Recv MA -19607\r\n>
17-02-28 20:18:15.547 -08 000000025 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Set target position to 5947804 encoder counts
17-02-28 20:18:15.549 -08 000000036 INF: Y Motor: Xmit s r0xca 5947804\r
17-02-28 20:18:15.607 -08 000000077 INF: FPGA: Recv ZDACR 18059
17-02-28 20:18:15.607 -08 000000072 INF: Z Motor: MoveAndTrigger took 265.4434 ms w/comms
17-02-28 20:18:15.607 -08 000000072 INF: Z Motor: After move to -0.0689, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:15.607 -08 000000072 INF: Z Motor: MoveAbsStepped took 265.6061 ms
17-02-28 20:18:15.607 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:15.609 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.609 -08 000000036 INF: Y Motor: Start the move command
17-02-28 20:18:15.609 -08 000000036 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:15.609 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:18:15.610 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.610 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:18:15.610 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.611 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:15.611 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:15.611 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:15.612 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:15.612 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:18:15.669 -08 000000066 INF: FPGA: Recv ZSEL 
17-02-28 20:18:15.670 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:15.670 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:18:15.671 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:15.671 -08 000000036 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:18:15.671 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:15.731 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:18:15.731 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:15.732 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:15.733 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.734 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:18:15.735 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:18:15.735 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:18:15.793 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:15.793 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.795 -08 000000036 INF: Y Motor: Unshifted Position: 5872223
17-02-28 20:18:15.795 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:15.795 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.797 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:15.797 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:15.797 -08 000000090 INF: Z Motor: Arming to move to -0.0289 mm
17-02-28 20:18:15.797 -08 000000090 INF: FPGA: Xmit ZYT 6427804 4\n
17-02-28 20:18:15.845 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:15.855 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:18:15.855 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372223 enc / 63.722 mm / ) = 6427804 enc / 64.278 mm
17-02-28 20:18:15.855 -08 000000090 INF: FPGA: Xmit ZARM 7573\n
17-02-28 20:18:15.919 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:18:15.920 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.4572 ms
17-02-28 20:18:15.920 -08 000000090 INF: Z Motor: ArmAbsStepped took 122.6754 ms
17-02-28 20:18:15.920 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:15.921 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.923 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:15.923 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.925 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:15.925 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:18:15.926 -08 000000090 INF: ======================================
17-02-28 20:18:15.969 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:15.981 -08 000000025 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:16.046 -08 000000025 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:16.046 -08 000000025 INF: X Motor: Moved to 11.1313 after 499 ms
17-02-28 20:18:16.046 -08 000000025 INF: ======================================
17-02-28 20:18:16.108 -08 000000036 INF: Y Motor: Unshifted Position: 5947804
17-02-28 20:18:16.108 -08 000000036 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:16.108 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:16.170 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:16.170 -08 000000036 INF: Y Motor: Moved to 64.4780 after 499 ms
17-02-28 20:18:16.170 -08 000000036 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:16.232 -08 000000036 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:16.232 -08 000000036 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:16.232 -08 000000036 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:16.295 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:16.295 -08 000000036 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:16.295 -08 000000036 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:16.357 -08 000000036 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: Recv v 0\r
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:16.419 -08 000000036 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:16.484 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:16.484 -08 000000036 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:16.484 -08 000000036 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:16.546 -08 000000036 INF: Y Motor: Recv ok\r
17-02-28 20:18:16.546 -08 000000036 INF: ======================================
17-02-28 20:18:16.547 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:18:16.548 -08 000000038 INF: ======================================
17-02-28 20:18:16.567 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:16.567 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:16.567 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:16.582 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:16.584 -08 000000045 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:17.612 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:17.612 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:17.613 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:17.628 -08 000000045 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:17.630 -08 000000045 INF: ===================Camera Arm TDI===================
17-02-28 20:18:17.631 -08 000000045 INF: ======================================
17-02-28 20:18:17.632 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:17.633 -08 000000072 INF: ======================================
17-02-28 20:18:17.634 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:17.635 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:17.635 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:18:17.635 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:18:17.669 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:17.669 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:18:17.731 -08 000000082 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:17.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:17.732 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:17.732 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:17.791 -08 000000034 INF: FPGA: Recv TDIYERD 6447805
17-02-28 20:18:17.791 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447805 counts (64.478 mm)
17-02-28 20:18:17.791 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:17.792 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:17.793 -08 000000072 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:17.793 -08 000000086 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:17.793 -08 000000086 INF: ======================================
17-02-28 20:18:17.793 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:17.794 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:17.794 -08 000000072 INF: FPGA: Xmit TDIYPOS 6336879\n
17-02-28 20:18:17.853 -08 000000052 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:17.853 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:17.854 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:17.855 -08 000000072 INF: FPGA: Xmit TDIYARM3 139264 6427804 1 1\n
17-02-28 20:18:17.915 -08 000000025 INF: FPGA: Recv TDIYARM3
17-02-28 20:18:17.915 -08 000000072 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:17.916 -08 000000072 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:17.917 -08 000000072 INF: ======================================
17-02-28 20:18:17.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:17.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:17.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:17.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:17.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:17.921 -08 000000108 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:17.921 -08 000000057 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:17.921 -08 000000108 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:17.921 -08 000000108 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:17.921 -08 000000108 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:17.921 -08 000000057 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:17.921 -08 000000108 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:17.921 -08 000000057 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:17.921 -08 000000057 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:17.922 -08 000000057 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:18.292 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:18:18.292 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:18:18.293 -08 000000057 INF: Excitation Filter 1: Moved -107 steps in 371.4075 ms
17-02-28 20:18:18.293 -08 000000057 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 371.5303 ms
17-02-28 20:18:18.293 -08 000000057 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 371.6086 ms
17-02-28 20:18:18.293 -08 000000108 INF: Excitation Filter 2: Moved -107 steps in 371.601 ms
17-02-28 20:18:18.293 -08 000000108 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.7854 ms
17-02-28 20:18:18.293 -08 000000108 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 371.8519 ms
17-02-28 20:18:18.293 -08 000000057 INF: ======================================
17-02-28 20:18:18.293 -08 000000108 INF: ======================================
17-02-28 20:18:18.294 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:18.295 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:18.296 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:18:18.296 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:18.296 -08 000000060 INF: ===================FPGA Z Wait===================
17-02-28 20:18:18.296 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:18.296 -08 000000060 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:18.296 -08 000000089 INF: Y Motor: Moving to 14.8297 mm @6.500 mm/sec, started at 64.4780 mm
17-02-28 20:18:18.297 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:18.297 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:18.297 -08 000000045 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:18.297 -08 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:18.298 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:18:18.298 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:18:18.298 -08 000000064 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:18.299 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.299 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.300 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.300 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.354 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.354 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:18.354 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:18.416 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.416 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:18.449 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.449 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.450 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.450 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Set target position to 982970 encoder counts
17-02-28 20:18:18.478 -08 000000089 INF: Y Motor: Xmit s r0xca 982970\r
17-02-28 20:18:18.543 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.543 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:18:18.543 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:18.599 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.599 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.600 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:18.600 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:18.603 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:18.603 -08 000000089 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:18:18.603 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:18.663 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:18.663 -08 000000060 INF: ======================================
17-02-28 20:18:18.730 -08 000000089 INF: Y Motor: Unshifted Position: 5887252
17-02-28 20:18:18.749 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:18.749 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:18.749 -08 000000047 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:18.750 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:18.750 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:18.750 -08 000000105 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:18.780 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:18.904 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:18.916 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:18.916 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:18.916 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:18.916 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:18.916 -08 000000047 INF: ===================Camera #2 Frame #11===================
17-02-28 20:18:18.916 -08 000000105 INF: ===================Camera #0 Frame #11===================
17-02-28 20:18:19.040 -08 000000089 INF: Y Motor: Unshifted Position: 5683582
17-02-28 20:18:19.086 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:19.086 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:19.086 -08 000000105 INF: ===================Camera #0 Frame #17===================
17-02-28 20:18:19.087 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:19.087 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:19.087 -08 000000047 INF: ===================Camera #2 Frame #17===================
17-02-28 20:18:19.090 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.217 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.255 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:19.255 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:19.255 -08 000000105 INF: ===================Camera #0 Frame #23===================
17-02-28 20:18:19.257 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:19.257 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:19.257 -08 000000047 INF: ===================Camera #2 Frame #23===================
17-02-28 20:18:19.353 -08 000000089 INF: Y Motor: Unshifted Position: 5479488
17-02-28 20:18:19.403 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.423 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:19.423 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:19.423 -08 000000105 INF: ===================Camera #0 Frame #29===================
17-02-28 20:18:19.426 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:19.426 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:19.426 -08 000000047 INF: ===================Camera #2 Frame #29===================
17-02-28 20:18:19.529 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.591 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:18:19.591 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:18:19.591 -08 000000105 INF: ===================Camera #0 Frame #36===================
17-02-28 20:18:19.595 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:18:19.595 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:18:19.595 -08 000000047 INF: ===================Camera #2 Frame #36===================
17-02-28 20:18:19.666 -08 000000089 INF: Y Motor: Unshifted Position: 5278635
17-02-28 20:18:19.716 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.762 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:18:19.762 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:18:19.762 -08 000000105 INF: ===================Camera #0 Frame #42===================
17-02-28 20:18:19.767 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:18:19.767 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:18:19.767 -08 000000047 INF: ===================Camera #2 Frame #42===================
17-02-28 20:18:19.840 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:19.932 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:19.932 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:19.932 -08 000000105 INF: ===================Camera #0 Frame #48===================
17-02-28 20:18:19.938 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:19.938 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:19.938 -08 000000047 INF: ===================Camera #2 Frame #48===================
17-02-28 20:18:19.976 -08 000000089 INF: Y Motor: Unshifted Position: 5074968
17-02-28 20:18:20.026 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.102 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:18:20.102 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:18:20.102 -08 000000105 INF: ===================Camera #0 Frame #54===================
17-02-28 20:18:20.108 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:18:20.108 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:18:20.108 -08 000000047 INF: ===================Camera #2 Frame #55===================
17-02-28 20:18:20.153 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.272 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:18:20.272 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:18:20.272 -08 000000105 INF: ===================Camera #0 Frame #61===================
17-02-28 20:18:20.282 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:18:20.282 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:18:20.282 -08 000000047 INF: ===================Camera #2 Frame #61===================
17-02-28 20:18:20.289 -08 000000089 INF: Y Motor: Unshifted Position: 4871303
17-02-28 20:18:20.339 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.445 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:18:20.445 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:18:20.445 -08 000000105 INF: ===================Camera #0 Frame #67===================
17-02-28 20:18:20.453 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:18:20.453 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:18:20.453 -08 000000047 INF: ===================Camera #2 Frame #67===================
17-02-28 20:18:20.463 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.602 -08 000000089 INF: Y Motor: Unshifted Position: 4669803
17-02-28 20:18:20.615 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:18:20.615 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:18:20.615 -08 000000105 INF: ===================Camera #0 Frame #73===================
17-02-28 20:18:20.624 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:18:20.624 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:18:20.624 -08 000000047 INF: ===================Camera #2 Frame #74===================
17-02-28 20:18:20.652 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.779 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.785 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:18:20.785 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:18:20.785 -08 000000105 INF: ===================Camera #0 Frame #80===================
17-02-28 20:18:20.798 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:18:20.798 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:18:20.798 -08 000000047 INF: ===================Camera #2 Frame #80===================
17-02-28 20:18:20.912 -08 000000089 INF: Y Motor: Unshifted Position: 4465691
17-02-28 20:18:20.958 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:18:20.958 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:18:20.958 -08 000000105 INF: ===================Camera #0 Frame #86===================
17-02-28 20:18:20.962 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:20.969 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:18:20.969 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:18:20.969 -08 000000047 INF: ===================Camera #2 Frame #86===================
17-02-28 20:18:21.089 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.128 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:18:21.128 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:18:21.128 -08 000000105 INF: ===================Camera #0 Frame #92===================
17-02-28 20:18:21.139 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:18:21.139 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:18:21.139 -08 000000047 INF: ===================Camera #2 Frame #93===================
17-02-28 20:18:21.225 -08 000000089 INF: Y Motor: Unshifted Position: 4262679
17-02-28 20:18:21.275 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.298 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:18:21.298 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:18:21.298 -08 000000105 INF: ===================Camera #0 Frame #98===================
17-02-28 20:18:21.313 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:18:21.313 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:18:21.313 -08 000000047 INF: ===================Camera #2 Frame #99===================
17-02-28 20:18:21.399 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.468 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:18:21.468 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:18:21.468 -08 000000105 INF: ===================Camera #0 Frame #105===================
17-02-28 20:18:21.484 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:18:21.484 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:18:21.484 -08 000000047 INF: ===================Camera #2 Frame #105===================
17-02-28 20:18:21.538 -08 000000089 INF: Y Motor: Unshifted Position: 4060952
17-02-28 20:18:21.588 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.641 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:18:21.641 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:18:21.641 -08 000000105 INF: ===================Camera #0 Frame #111===================
17-02-28 20:18:21.655 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:18:21.655 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:18:21.655 -08 000000047 INF: ===================Camera #2 Frame #112===================
17-02-28 20:18:21.710 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.811 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:18:21.811 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:18:21.811 -08 000000105 INF: ===================Camera #0 Frame #117===================
17-02-28 20:18:21.829 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:18:21.829 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:18:21.829 -08 000000047 INF: ===================Camera #2 Frame #118===================
17-02-28 20:18:21.850 -08 000000089 INF: Y Motor: Unshifted Position: 3858157
17-02-28 20:18:21.900 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:21.981 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:18:21.981 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:18:21.981 -08 000000105 INF: ===================Camera #0 Frame #124===================
17-02-28 20:18:22.000 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:18:22.000 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:18:22.000 -08 000000047 INF: ===================Camera #2 Frame #124===================
17-02-28 20:18:22.024 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.154 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:18:22.154 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:18:22.154 -08 000000105 INF: ===================Camera #0 Frame #130===================
17-02-28 20:18:22.160 -08 000000089 INF: Y Motor: Unshifted Position: 3654707
17-02-28 20:18:22.171 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:18:22.171 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:18:22.171 -08 000000047 INF: ===================Camera #2 Frame #131===================
17-02-28 20:18:22.210 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.324 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:18:22.324 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:18:22.324 -08 000000105 INF: ===================Camera #0 Frame #136===================
17-02-28 20:18:22.334 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.345 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:18:22.345 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:18:22.345 -08 000000047 INF: ===================Camera #2 Frame #137===================
17-02-28 20:18:22.474 -08 000000089 INF: Y Motor: Unshifted Position: 3452336
17-02-28 20:18:22.494 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:18:22.494 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:18:22.494 -08 000000105 INF: ===================Camera #0 Frame #142===================
17-02-28 20:18:22.514 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:18:22.514 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:18:22.514 -08 000000047 INF: ===================Camera #2 Frame #143===================
17-02-28 20:18:22.524 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.648 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.663 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:18:22.663 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:18:22.663 -08 000000105 INF: ===================Camera #0 Frame #149===================
17-02-28 20:18:22.685 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:18:22.685 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:18:22.685 -08 000000047 INF: ===================Camera #2 Frame #149===================
17-02-28 20:18:22.786 -08 000000089 INF: Y Motor: Unshifted Position: 3249537
17-02-28 20:18:22.836 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:22.836 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:18:22.836 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:18:22.836 -08 000000105 INF: ===================Camera #0 Frame #155===================
17-02-28 20:18:22.856 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:18:22.856 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:18:22.856 -08 000000047 INF: ===================Camera #2 Frame #156===================
17-02-28 20:18:22.960 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.006 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:18:23.006 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:18:23.006 -08 000000105 INF: ===================Camera #0 Frame #161===================
17-02-28 20:18:23.030 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:18:23.030 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:18:23.030 -08 000000047 INF: ===================Camera #2 Frame #162===================
17-02-28 20:18:23.096 -08 000000089 INF: Y Motor: Unshifted Position: 3045875
17-02-28 20:18:23.146 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.176 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:18:23.176 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:18:23.176 -08 000000105 INF: ===================Camera #0 Frame #168===================
17-02-28 20:18:23.201 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:18:23.201 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:18:23.201 -08 000000047 INF: ===================Camera #2 Frame #168===================
17-02-28 20:18:23.270 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.349 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:18:23.349 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:18:23.349 -08 000000105 INF: ===================Camera #0 Frame #174===================
17-02-28 20:18:23.372 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:18:23.372 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:18:23.372 -08 000000047 INF: ===================Camera #2 Frame #175===================
17-02-28 20:18:23.410 -08 000000089 INF: Y Motor: Unshifted Position: 2842867
17-02-28 20:18:23.460 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.519 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:18:23.519 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:18:23.519 -08 000000105 INF: ===================Camera #0 Frame #180===================
17-02-28 20:18:23.546 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:18:23.546 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:18:23.546 -08 000000047 INF: ===================Camera #2 Frame #181===================
17-02-28 20:18:23.584 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.689 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:18:23.689 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:18:23.689 -08 000000105 INF: ===================Camera #0 Frame #186===================
17-02-28 20:18:23.717 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:18:23.717 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:18:23.717 -08 000000047 INF: ===================Camera #2 Frame #187===================
17-02-28 20:18:23.722 -08 000000089 INF: Y Motor: Unshifted Position: 2640715
17-02-28 20:18:23.772 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:23.859 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:18:23.859 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:18:23.859 -08 000000105 INF: ===================Camera #0 Frame #193===================
17-02-28 20:18:23.888 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:18:23.888 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:18:23.888 -08 000000047 INF: ===================Camera #2 Frame #194===================
17-02-28 20:18:23.896 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.032 -08 000000089 INF: Y Motor: Unshifted Position: 2437062
17-02-28 20:18:24.032 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:18:24.032 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:18:24.032 -08 000000105 INF: ===================Camera #0 Frame #199===================
17-02-28 20:18:24.062 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:18:24.062 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:18:24.062 -08 000000047 INF: ===================Camera #2 Frame #200===================
17-02-28 20:18:24.082 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.202 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:18:24.202 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:18:24.202 -08 000000105 INF: ===================Camera #0 Frame #205===================
17-02-28 20:18:24.206 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.233 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:18:24.233 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:18:24.233 -08 000000047 INF: ===================Camera #2 Frame #206===================
17-02-28 20:18:24.347 -08 000000089 INF: Y Motor: Unshifted Position: 2234685
17-02-28 20:18:24.372 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:18:24.372 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:18:24.372 -08 000000105 INF: ===================Camera #0 Frame #212===================
17-02-28 20:18:24.397 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.404 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:18:24.404 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:18:24.404 -08 000000047 INF: ===================Camera #2 Frame #213===================
17-02-28 20:18:24.520 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.544 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:18:24.544 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:18:24.544 -08 000000105 INF: ===================Camera #0 Frame #218===================
17-02-28 20:18:24.576 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:18:24.576 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:18:24.576 -08 000000047 INF: ===================Camera #2 Frame #219===================
17-02-28 20:18:24.658 -08 000000089 INF: Y Motor: Unshifted Position: 2031234
17-02-28 20:18:24.708 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.712 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:18:24.712 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:18:24.712 -08 000000105 INF: ===================Camera #0 Frame #224===================
17-02-28 20:18:24.745 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:18:24.745 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:18:24.745 -08 000000047 INF: ===================Camera #2 Frame #225===================
17-02-28 20:18:24.832 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:24.882 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:18:24.882 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:18:24.882 -08 000000105 INF: ===================Camera #0 Frame #230===================
17-02-28 20:18:24.916 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:18:24.916 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:18:24.916 -08 000000047 INF: ===================Camera #2 Frame #232===================
17-02-28 20:18:24.968 -08 000000089 INF: Y Motor: Unshifted Position: 1828215
17-02-28 20:18:25.018 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.052 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:18:25.052 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:18:25.052 -08 000000105 INF: ===================Camera #0 Frame #237===================
17-02-28 20:18:25.090 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:18:25.090 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:18:25.090 -08 000000047 INF: ===================Camera #2 Frame #238===================
17-02-28 20:18:25.142 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.225 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:18:25.225 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:18:25.225 -08 000000105 INF: ===================Camera #0 Frame #243===================
17-02-28 20:18:25.261 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:18:25.261 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:18:25.261 -08 000000047 INF: ===================Camera #2 Frame #244===================
17-02-28 20:18:25.282 -08 000000089 INF: Y Motor: Unshifted Position: 1626068
17-02-28 20:18:25.332 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.395 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:18:25.395 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:18:25.395 -08 000000105 INF: ===================Camera #0 Frame #249===================
17-02-28 20:18:25.432 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:18:25.432 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:18:25.432 -08 000000047 INF: ===================Camera #2 Frame #251===================
17-02-28 20:18:25.457 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.564 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:18:25.564 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:18:25.564 -08 000000105 INF: ===================Camera #0 Frame #255===================
17-02-28 20:18:25.592 -08 000000089 INF: Y Motor: Unshifted Position: 1422614
17-02-28 20:18:25.606 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:18:25.606 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:18:25.606 -08 000000047 INF: ===================Camera #2 Frame #257===================
17-02-28 20:18:25.642 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.733 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:18:25.733 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:18:25.733 -08 000000105 INF: ===================Camera #0 Frame #262===================
17-02-28 20:18:25.766 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:25.777 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:18:25.777 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:18:25.777 -08 000000047 INF: ===================Camera #2 Frame #263===================
17-02-28 20:18:25.903 -08 000000089 INF: Y Motor: Unshifted Position: 1218292
17-02-28 20:18:25.906 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:18:25.906 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:18:25.906 -08 000000105 INF: ===================Camera #0 Frame #268===================
17-02-28 20:18:25.948 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:18:25.948 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:18:25.948 -08 000000047 INF: ===================Camera #2 Frame #270===================
17-02-28 20:18:25.953 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:26.028 -08 000000101 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:26.028 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:26.030 -08 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:26.031 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:26.031 -08 000000086 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:26.031 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:26.031 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:26.031 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:26.031 -08 000000086 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:26.031 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:26.031 -08 000000086 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:26.031 -08 000000086 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:26.032 -08 000000086 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:26.076 -08 000000105 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:26.076 -08 000000105 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:26.076 -08 000000105 INF: ===================Camera #0 Frame #272===================
17-02-28 20:18:26.080 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:26.089 -08 000000105 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:26.090 -08 000000105 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:26.216 -08 000000089 INF: Y Motor: Unshifted Position: 1016574
17-02-28 20:18:26.256 -08 000000105 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:26.256 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:26.256 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:26.256 -08 000000047 INF: ===================Camera #2 Frame #272===================
17-02-28 20:18:26.256 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:18:26.263 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:26.264 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:26.267 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:26.293 -08 000000105 INF: ======================================
17-02-28 20:18:26.405 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:18:26.405 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:18:26.405 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 373.051 ms
17-02-28 20:18:26.405 -08 000000086 INF: Excitation Filter 2: Moved 107 steps in 372.954 ms
17-02-28 20:18:26.405 -08 000000086 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.1646 ms
17-02-28 20:18:26.405 -08 000000086 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2349 ms
17-02-28 20:18:26.405 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.1669 ms
17-02-28 20:18:26.405 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.5494 ms
17-02-28 20:18:26.405 -08 000000086 INF: ======================================
17-02-28 20:18:26.406 -08 000000077 INF: ======================================
17-02-28 20:18:26.407 -08 000000089 INF: Y Motor: Unshifted Position: 982970
17-02-28 20:18:26.407 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:26.407 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:26.407 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:26.408 -08 000000064 INF: ======================================
17-02-28 20:18:26.463 -08 000000047 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:26.463 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:18:26.466 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:26.466 -08 000000089 INF: Y Motor: Moved to 14.8297 after 7862 ms
17-02-28 20:18:26.466 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:26.499 -08 000000047 INF: ======================================
17-02-28 20:18:26.500 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:18:26.501 -08 000000045 INF: ======================================
17-02-28 20:18:26.528 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:26.528 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:26.528 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:26.561 -08 000000010 INF: RunCopyService queue size at 2/28/2017 8:18:26 PM is 2
17-02-28 20:18:26.591 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:26.591 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:26.591 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:26.653 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:26.716 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:26.778 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:26.778 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:26.778 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:26.840 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:18:26.840 -08 000000089 INF: ======================================
17-02-28 20:18:26.841 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:26.842 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:26.843 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:26.843 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:26.903 -08 000000050 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:26.903 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:26.965 -08 000000025 INF: FPGA: Recv TDIYERD 1482971
17-02-28 20:18:26.965 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:27.027 -08 000000036 INF: FPGA: Recv ZADCR 16671
17-02-28 20:18:27.027 -08 000000018 INF: At scan end Y pos = 14.830 and Z pos = -0.064. Y moved -48.539 mm
17-02-28 20:18:27.027 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:27.090 -08 000000101 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:18:27.090 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:18:27.090 -08 000000018 INF: TDIScan finished after 11768.9868 ms
17-02-28 20:18:27.090 -08 000000018 INF: Image[0]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:18:27.090 -08 000000018 INF: Image[2]: Y should trigger at 63.369 mm, 2nd row was at 64.278 mm (error = 0.909 mm)
17-02-28 20:18:27.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.125 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.799 um
17-02-28 20:18:27.125 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.126 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:27.151 -08 000000036 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:27.151 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.152 -08 000000078 INF: ===================Dither Clean Up Command===================
17-02-28 20:18:27.152 -08 000000064 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:27.152 -08 000000087 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:27.152 -08 000000072 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:27.153 -08 000000087 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:27.153 -08 000000087 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:27.153 -08 000000064 INF: ======================================
17-02-28 20:18:27.153 -08 000000072 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:27.153 -08 000000072 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:27.153 -08 000000030 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:27.153 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:27.154 -08 000000030 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:18:27.156 -08 000000057 INF: ===================LFT:Extracting coords===================
17-02-28 20:18:27.182 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:27.182 -08 000000057 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:18:27.183 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.183 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.183 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.183 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.184 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.184 -08 000000025 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.184 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.184 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:27.213 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:27.213 -08 000000039 INF: FPGA: Recv ZSEL 
17-02-28 20:18:27.213 -08 000000030 INF: FPGA: Xmit ZDACW 18059\n
17-02-28 20:18:27.213 -08 000000072 INF: ======================================
17-02-28 20:18:27.215 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.215 -08 000000087 INF: ======================================
17-02-28 20:18:27.258 -08 000000105 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.258 -08 000000025 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.258 -08 000000090 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.258 -08 000000058 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:27.275 -08 000000081 INF: FPGA: Recv ZDACW 
17-02-28 20:18:27.276 -08 000000030 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:18:27.276 -08 000000030 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:18:27.342 -08 000000087 INF: FPGA: Recv TDIBB
17-02-28 20:18:27.342 -08 000000030 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:27.343 -08 000000030 INF: ======================================
17-02-28 20:18:27.409 -08 000000105 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:18:27.409 -08 000000105 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0488909731552131 in the next cycle, cycle 4 FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000025 INF: LFT found best fwhm score 2.000251 in 151 ms
17-02-28 20:18:27.409 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.409 -08 000000025 INF: LFT found good score at index 4961 with fwhm value 2.000251. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000058 INF: LFT found best fwhm score 2.000115 in 151 ms
17-02-28 20:18:27.409 -08 000000058 INF: LFT found good score at index 769 with fwhm value 2.000115. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:27.409 -08 000000090 INF: LFT found best fwhm score 2.070725 in 151 ms
17-02-28 20:18:27.409 -08 000000090 INF: LFT found good score at index 3169 with fwhm value 2.070725. Next cycle, cycle 4 starting Z position for bottom surface is at -0.048 mm FC:A, C:3,L:3,B
17-02-28 20:18:27.410 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.410 -08 000000105 INF: ======================================
17-02-28 20:18:27.410 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.410 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:18:27.410 -08 000000025 INF: ======================================
17-02-28 20:18:27.410 -08 000000058 INF: ======================================
17-02-28 20:18:27.410 -08 000000090 INF: ======================================
17-02-28 20:18:27.411 -08 000000057 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:27.412 -08 000000057 INF: LFT weighted average best Z for bottom surface is at -0.048mm FC:A, C:3,L:3,B
17-02-28 20:18:27.412 -08 000000057 INF: ======================================
17-02-28 20:18:27.413 -08 000000078 INF: ======================================
17-02-28 20:18:27.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:27.416 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 11.09733 Y = 39.70494===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:18:27.417 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:18:27.440 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:18:27.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:27.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:27.441 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.441 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:27.441 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:18:27.441 -08 000000018 INF: Transformed XStagePosition from 12.20533 mm to 12.2301746625453 mm.
17-02-28 20:18:27.488 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4794207395762 mm.
17-02-28 20:18:27.488 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2794207395762 mm.
17-02-28 20:18:27.488 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3701707395762 mm.
17-02-28 20:18:27.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.491 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:27.492 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:27.492 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -68.9 um, section = C_1
17-02-28 20:18:27.493 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:27.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:27.501 -08 000000073 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:27.504 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:18:27.505 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:27.507 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:27.508 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:27.511 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":3,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF212","HCSMMF213","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.511 -08 000000105 INF: ===================Move X Motor without settling===================
17-02-28 20:18:27.511 -08 000000051 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:27.511 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:27.511 -08 000000105 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:27.512 -08 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:27.512 -08 000000051 INF: ======================================
17-02-28 20:18:27.513 -08 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:27.513 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:18:27.513 -08 000000101 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:27.513 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:27.514 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:27.514 -08 000000072 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:27.514 -08 000000072 INF: Y Motor: Moving to 64.4794 mm @25.000 mm/sec, started at 14.8297 mm
17-02-28 20:18:27.514 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:27.514 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:27.514 -08 000000072 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:27.514 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:27.515 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:27.515 -08 000000078 INF: ======================================
17-02-28 20:18:27.515 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:18:27.516 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:27.516 -08 000000089 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:27.516 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:27.517 -08 000000057 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:27.517 -08 000000089 INF: ======================================
17-02-28 20:18:27.517 -08 000000087 INF: ======================================
17-02-28 20:18:27.517 -08 000000057 INF: ======================================
17-02-28 20:18:27.517 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:27.518 -08 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:27.519 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.519 -08 000000089 INF: ======================================
17-02-28 20:18:27.519 -08 000000087 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:27.519 -08 000000057 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:27.520 -08 000000087 INF: ======================================
17-02-28 20:18:27.520 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.520 -08 000000057 INF: ======================================
17-02-28 20:18:27.520 -08 000000039 INF: ===================Camera Arm TDI===================
17-02-28 20:18:27.521 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:27.521 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:27.521 -08 000000078 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:18:27.521 -08 000000039 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:27.522 -08 000000039 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:27.522 -08 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:27.523 -08 000000082 INF: ======================================
17-02-28 20:18:27.526 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:27.527 -08 000000051 INF: ======================================
17-02-28 20:18:27.527 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:18:27.540 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:27.541 -08 000000038 INF: ======================================
17-02-28 20:18:27.543 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:27.543 -08 000000078 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:18:27.543 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:27.545 -08 000000064 INF: ======================================
17-02-28 20:18:27.546 -08 000000073 INF: ======================================
17-02-28 20:18:27.553 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":3,"Tile":2106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF203","HCSMMF189","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.581 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":3,"Tile":2101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF226","HCSMMF247","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.589 -08 000000075 INF: FPGA: Recv TDIBB
17-02-28 20:18:27.590 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:27.591 -08 000000105 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:27.591 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.591 -08 000000072 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:27.591 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:27.591 -08 000000105 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:27.591 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:27.592 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":3,"Tile":2104,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF286","HCSMMF256","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.592 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.593 -08 000000078 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:18:27.593 -08 000000078 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:18:27.594 -08 000000078 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:18:27.650 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":3,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF230","HCSMMF202","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.652 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:27.652 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:27.654 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.654 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:27.654 -08 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Moving to 12.2302 mm @15.000 mm/sec, started at 11.1313 mm
17-02-28 20:18:27.654 -08 000000105 INF: X Motor: Xmit MA -19157\n
17-02-28 20:18:27.654 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.655 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":3,"Tile":2109,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF241","HCSMMF227","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.656 -08 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:27.656 -08 000000078 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:27.656 -08 000000078 INF: Z Motor: Arming to move to -0.0289 mm
17-02-28 20:18:27.656 -08 000000078 INF: FPGA: Xmit ZYT 6427942 4\n
17-02-28 20:18:27.657 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":3,"Tile":2105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF235","HCSMMF277","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.658 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":3,"Tile":2102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF211","HCSMMF231","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.659 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":3,"Tile":2103,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF239","HCSMMF265","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.660 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":3,"Tile":2110,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF194","HCSMMF245","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.660 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":3,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF267","HCSMMF252","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.661 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":3,"Tile":2112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF237","HCSMMF254","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.662 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":3,"Tile":2116,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF210","HCSMMF248","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.662 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":3,"Tile":2115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF192","HCSMMF217","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.663 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":3,"Tile":2113,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF250","HCSMMF278","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.664 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":3,"Tile":2117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF232","HCSMMF270","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.665 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":3,"Tile":2122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF182","HCSMMF261","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.665 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":3,"Tile":2114,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF198","HCSMMF177","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.666 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":3,"Tile":2119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF238","HCSMMF183","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.667 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":3,"Tile":2121,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF193","HCSMMF199","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.668 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":3,"Tile":2120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF240","HCSMMF283","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.669 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":3,"Tile":2124,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF246","HCSMMF190","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.669 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":3,"Tile":2126,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF197","HCSMMF205","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.670 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":3,"Tile":2118,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF187","HCSMMF220","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.671 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":3,"Tile":2128,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF207","HCSMMF253","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.672 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":3,"Tile":2125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF272","HCSMMF275","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.674 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":3,"Tile":2123,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF236","HCSMMF186","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.675 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":3,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF195","HCSMMF262","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:27.712 -08 000000060 INF: FPGA: Recv ZYT 
17-02-28 20:18:27.712 -08 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1482970 enc / 14.830 mm / ) = 6427942 enc / 64.279 mm
17-02-28 20:18:27.712 -08 000000078 INF: FPGA: Xmit ZARM 7573\n
17-02-28 20:18:27.714 -08 000000105 INF: X Motor: Recv MA -19157\r\n>
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:27.714 -08 000000105 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Set target position to 5947942 encoder counts
17-02-28 20:18:27.714 -08 000000072 INF: Y Motor: Xmit s r0xca 5947942\r
17-02-28 20:18:27.715 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.721 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:18:27.774 -08 000000010 INF: FPGA: Recv ZARM
17-02-28 20:18:27.774 -08 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7979 ms
17-02-28 20:18:27.774 -08 000000078 INF: Z Motor: ArmAbsStepped took 117.8831 ms
17-02-28 20:18:27.774 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:27.776 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.776 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.776 -08 000000072 INF: Y Motor: Start the move command
17-02-28 20:18:27.776 -08 000000072 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:27.777 -08 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:27.777 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.779 -08 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:27.779 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:18:27.780 -08 000000078 INF: ======================================
17-02-28 20:18:27.817 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.817 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:18:27.841 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:27.841 -08 000000072 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:18:27.841 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:27.854 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.860 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:18:27.965 -08 000000072 INF: Y Motor: Unshifted Position: 1067800
17-02-28 20:18:27.967 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:27.972 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:18:28.015 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.053 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:28.058 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:18:28.113 -08 000000039 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:28.113 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:28.113 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:28.128 -08 000000039 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:28.130 -08 000000039 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:28.139 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.162 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:28.281 -08 000000072 INF: Y Motor: Unshifted Position: 1772139
17-02-28 20:18:28.331 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.338 -08 000000105 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:28.400 -08 000000105 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:28.400 -08 000000105 INF: X Motor: Moved to 12.2300 after 686 ms
17-02-28 20:18:28.400 -08 000000105 INF: ======================================
17-02-28 20:18:28.450 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.470 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:18:28.589 -08 000000072 INF: Y Motor: Unshifted Position: 2557988
17-02-28 20:18:28.639 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.728 -08 000000039 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:28.728 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:28.728 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:28.744 -08 000000039 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:28.746 -08 000000039 INF: ===================Camera Arm TDI===================
17-02-28 20:18:28.748 -08 000000039 INF: ======================================
17-02-28 20:18:28.749 -08 000000101 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:28.750 -08 000000101 INF: ======================================
17-02-28 20:18:28.762 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:28.901 -08 000000072 INF: Y Motor: Unshifted Position: 3337929
17-02-28 20:18:28.951 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.075 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.217 -08 000000072 INF: Y Motor: Unshifted Position: 4120504
17-02-28 20:18:29.267 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.422 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.524 -08 000000072 INF: Y Motor: Unshifted Position: 4898776
17-02-28 20:18:29.574 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.700 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:29.837 -08 000000072 INF: Y Motor: Unshifted Position: 5672417
17-02-28 20:18:29.887 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:30.010 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:30.148 -08 000000072 INF: Y Motor: Unshifted Position: 5947944
17-02-28 20:18:30.148 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:30.148 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:30.210 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:30.210 -08 000000072 INF: Y Motor: Moved to 64.4794 after 2369 ms
17-02-28 20:18:30.210 -08 000000072 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:30.274 -08 000000072 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:30.274 -08 000000072 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:30.274 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:30.336 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:30.336 -08 000000072 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:30.336 -08 000000072 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:30.398 -08 000000072 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:30.459 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:30.524 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:30.524 -08 000000072 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:30.524 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:30.585 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:18:30.585 -08 000000072 INF: ======================================
17-02-28 20:18:30.587 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:18:30.588 -08 000000035 INF: ======================================
17-02-28 20:18:30.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:30.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:30.590 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:18:30.590 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:18:30.647 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:30.647 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:18:30.708 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:30.708 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:30.709 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:30.709 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:30.769 -08 000000053 INF: FPGA: Recv TDIYERD 6447944
17-02-28 20:18:30.769 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447944 counts (64.479 mm)
17-02-28 20:18:30.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:30.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:30.771 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:30.771 -08 000000090 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:30.771 -08 000000090 INF: ======================================
17-02-28 20:18:30.772 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:30.772 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:30.773 -08 000000045 INF: FPGA: Xmit TDIYPOS 6337017\n
17-02-28 20:18:30.834 -08 000000035 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:30.834 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:30.836 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:30.836 -08 000000045 INF: FPGA: Xmit TDIYARM3 139264 6427942 1 1\n
17-02-28 20:18:30.895 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:18:30.895 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:30.896 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:30.898 -08 000000045 INF: ======================================
17-02-28 20:18:30.899 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:30.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:30.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:30.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:30.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:30.902 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:30.902 -08 000000105 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:30.902 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:30.902 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:30.902 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:30.902 -08 000000105 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:30.902 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:30.902 -08 000000105 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:30.902 -08 000000105 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:30.903 -08 000000105 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:31.270 -08 000000047 INF: FPGA: Recv EX2MV
17-02-28 20:18:31.270 -08 000000047 INF: FPGA: Recv EX1MV
17-02-28 20:18:31.270 -08 000000105 INF: Excitation Filter 1: Moved -107 steps in 367.9989 ms
17-02-28 20:18:31.270 -08 000000105 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.1654 ms
17-02-28 20:18:31.270 -08 000000105 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.2836 ms
17-02-28 20:18:31.271 -08 000000105 INF: ======================================
17-02-28 20:18:31.271 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 369.0477 ms
17-02-28 20:18:31.271 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.217 ms
17-02-28 20:18:31.271 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2881 ms
17-02-28 20:18:31.271 -08 000000050 INF: ======================================
17-02-28 20:18:31.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:31.274 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:31.274 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:31.275 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:18:31.275 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:18:31.275 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:31.275 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:31.275 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:31.276 -08 000000058 INF: Y Motor: Moving to 14.8311 mm @6.500 mm/sec, started at 64.4794 mm
17-02-28 20:18:31.276 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:31.276 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:31.276 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:31.277 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:18:31.277 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:18:31.278 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.278 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.279 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:31.279 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.279 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.334 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.334 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:31.334 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:31.396 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.396 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:31.429 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.429 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.429 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.429 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Set target position to 983108 encoder counts
17-02-28 20:18:31.460 -08 000000058 INF: Y Motor: Xmit s r0xca 983108\r
17-02-28 20:18:31.519 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.519 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:18:31.519 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:31.579 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.579 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.579 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:31.579 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:31.584 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:31.584 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:18:31.584 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:31.644 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:31.644 -08 000000064 INF: ======================================
17-02-28 20:18:31.708 -08 000000058 INF: Y Motor: Unshifted Position: 5884135
17-02-28 20:18:31.729 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:31.729 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:31.729 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:31.729 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:31.729 -08 000000033 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:31.729 -08 000000038 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:31.758 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:31.884 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:31.902 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:31.902 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:31.902 -08 000000033 INF: ===================Camera #0 Frame #11===================
17-02-28 20:18:31.903 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:18:31.903 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:18:31.903 -08 000000038 INF: ===================Camera #2 Frame #11===================
17-02-28 20:18:32.022 -08 000000058 INF: Y Motor: Unshifted Position: 5681986
17-02-28 20:18:32.072 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.079 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:18:32.079 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:18:32.079 -08 000000033 INF: ===================Camera #0 Frame #18===================
17-02-28 20:18:32.082 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:18:32.082 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:18:32.082 -08 000000038 INF: ===================Camera #2 Frame #18===================
17-02-28 20:18:32.195 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.257 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:18:32.257 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:18:32.257 -08 000000033 INF: ===================Camera #0 Frame #24===================
17-02-28 20:18:32.263 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:18:32.263 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:18:32.263 -08 000000038 INF: ===================Camera #2 Frame #24===================
17-02-28 20:18:32.332 -08 000000058 INF: Y Motor: Unshifted Position: 5477675
17-02-28 20:18:32.382 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.427 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:18:32.427 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:18:32.427 -08 000000033 INF: ===================Camera #0 Frame #30===================
17-02-28 20:18:32.439 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:18:32.439 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:18:32.439 -08 000000038 INF: ===================Camera #2 Frame #31===================
17-02-28 20:18:32.508 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.604 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:18:32.604 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:18:32.604 -08 000000033 INF: ===================Camera #0 Frame #37===================
17-02-28 20:18:32.616 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:18:32.616 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:18:32.616 -08 000000038 INF: ===================Camera #2 Frame #37===================
17-02-28 20:18:32.646 -08 000000058 INF: Y Motor: Unshifted Position: 5276171
17-02-28 20:18:32.696 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.779 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:18:32.779 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:18:32.779 -08 000000033 INF: ===================Camera #0 Frame #43===================
17-02-28 20:18:32.791 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:18:32.791 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:18:32.791 -08 000000038 INF: ===================Camera #2 Frame #44===================
17-02-28 20:18:32.818 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:32.947 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:18:32.947 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:18:32.947 -08 000000033 INF: ===================Camera #0 Frame #50===================
17-02-28 20:18:32.956 -08 000000058 INF: Y Motor: Unshifted Position: 5072725
17-02-28 20:18:32.972 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:18:32.972 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:18:32.972 -08 000000038 INF: ===================Camera #2 Frame #50===================
17-02-28 20:18:33.006 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.121 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:18:33.121 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:18:33.121 -08 000000033 INF: ===================Camera #0 Frame #56===================
17-02-28 20:18:33.132 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.141 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:18:33.141 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:18:33.141 -08 000000038 INF: ===================Camera #2 Frame #57===================
17-02-28 20:18:33.270 -08 000000058 INF: Y Motor: Unshifted Position: 4870358
17-02-28 20:18:33.299 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:18:33.299 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:18:33.299 -08 000000033 INF: ===================Camera #0 Frame #63===================
17-02-28 20:18:33.320 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.324 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:18:33.324 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:18:33.324 -08 000000038 INF: ===================Camera #2 Frame #63===================
17-02-28 20:18:33.443 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.480 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:18:33.480 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:18:33.480 -08 000000033 INF: ===================Camera #0 Frame #69===================
17-02-28 20:18:33.503 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:18:33.503 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:18:33.503 -08 000000038 INF: ===================Camera #2 Frame #70===================
17-02-28 20:18:33.581 -08 000000058 INF: Y Motor: Unshifted Position: 4666044
17-02-28 20:18:33.631 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.655 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:18:33.655 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:18:33.655 -08 000000033 INF: ===================Camera #0 Frame #76===================
17-02-28 20:18:33.685 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:18:33.685 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:18:33.685 -08 000000038 INF: ===================Camera #2 Frame #77===================
17-02-28 20:18:33.754 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:33.835 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:18:33.835 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:18:33.835 -08 000000033 INF: ===================Camera #0 Frame #82===================
17-02-28 20:18:33.863 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:18:33.863 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:18:33.864 -08 000000038 INF: ===================Camera #2 Frame #83===================
17-02-28 20:18:33.893 -08 000000058 INF: Y Motor: Unshifted Position: 4463229
17-02-28 20:18:33.943 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.004 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:18:34.004 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:18:34.004 -08 000000033 INF: ===================Camera #0 Frame #88===================
17-02-28 20:18:34.039 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:18:34.039 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:18:34.039 -08 000000038 INF: ===================Camera #2 Frame #90===================
17-02-28 20:18:34.066 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.173 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:18:34.173 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:18:34.173 -08 000000033 INF: ===================Camera #0 Frame #95===================
17-02-28 20:18:34.204 -08 000000058 INF: Y Motor: Unshifted Position: 4260870
17-02-28 20:18:34.213 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:18:34.213 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:18:34.213 -08 000000038 INF: ===================Camera #2 Frame #96===================
17-02-28 20:18:34.254 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.345 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:18:34.345 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:18:34.345 -08 000000033 INF: ===================Camera #0 Frame #101===================
17-02-28 20:18:34.380 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.383 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:18:34.383 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:18:34.383 -08 000000038 INF: ===================Camera #2 Frame #102===================
17-02-28 20:18:34.514 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:18:34.514 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:18:34.514 -08 000000033 INF: ===================Camera #0 Frame #107===================
17-02-28 20:18:34.518 -08 000000058 INF: Y Motor: Unshifted Position: 4058708
17-02-28 20:18:34.553 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:18:34.553 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:18:34.553 -08 000000038 INF: ===================Camera #2 Frame #109===================
17-02-28 20:18:34.568 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.683 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:18:34.683 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:18:34.683 -08 000000033 INF: ===================Camera #0 Frame #113===================
17-02-28 20:18:34.691 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.727 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:18:34.727 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:18:34.727 -08 000000038 INF: ===================Camera #2 Frame #115===================
17-02-28 20:18:34.830 -08 000000058 INF: Y Motor: Unshifted Position: 3854390
17-02-28 20:18:34.851 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:18:34.851 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:18:34.851 -08 000000033 INF: ===================Camera #0 Frame #120===================
17-02-28 20:18:34.880 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:34.897 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:18:34.897 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:18:34.897 -08 000000038 INF: ===================Camera #2 Frame #121===================
17-02-28 20:18:35.003 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.022 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:18:35.022 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:18:35.022 -08 000000033 INF: ===================Camera #0 Frame #126===================
17-02-28 20:18:35.068 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128.
17-02-28 20:18:35.068 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128
17-02-28 20:18:35.068 -08 000000038 INF: ===================Camera #2 Frame #128===================
17-02-28 20:18:35.141 -08 000000058 INF: Y Motor: Unshifted Position: 3651590
17-02-28 20:18:35.191 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.191 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:18:35.191 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:18:35.191 -08 000000033 INF: ===================Camera #0 Frame #132===================
17-02-28 20:18:35.241 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:18:35.241 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:18:35.241 -08 000000038 INF: ===================Camera #2 Frame #134===================
17-02-28 20:18:35.314 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.360 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:18:35.360 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:18:35.360 -08 000000033 INF: ===================Camera #0 Frame #138===================
17-02-28 20:18:35.412 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:18:35.412 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:18:35.412 -08 000000038 INF: ===================Camera #2 Frame #140===================
17-02-28 20:18:35.452 -08 000000058 INF: Y Motor: Unshifted Position: 3449435
17-02-28 20:18:35.502 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.530 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:18:35.530 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:18:35.530 -08 000000033 INF: ===================Camera #0 Frame #145===================
17-02-28 20:18:35.583 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147.
17-02-28 20:18:35.583 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147
17-02-28 20:18:35.583 -08 000000038 INF: ===================Camera #2 Frame #147===================
17-02-28 20:18:35.628 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.701 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:18:35.701 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:18:35.701 -08 000000033 INF: ===================Camera #0 Frame #151===================
17-02-28 20:18:35.756 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:18:35.756 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:18:35.756 -08 000000038 INF: ===================Camera #2 Frame #153===================
17-02-28 20:18:35.766 -08 000000058 INF: Y Motor: Unshifted Position: 3247076
17-02-28 20:18:35.816 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:35.869 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:18:35.869 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:18:35.869 -08 000000033 INF: ===================Camera #0 Frame #157===================
17-02-28 20:18:35.925 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:18:35.925 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:18:35.925 -08 000000038 INF: ===================Camera #2 Frame #159===================
17-02-28 20:18:35.939 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.037 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:18:36.037 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:18:36.037 -08 000000033 INF: ===================Camera #0 Frame #163===================
17-02-28 20:18:36.077 -08 000000058 INF: Y Motor: Unshifted Position: 3042767
17-02-28 20:18:36.097 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:18:36.097 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:18:36.097 -08 000000038 INF: ===================Camera #2 Frame #166===================
17-02-28 20:18:36.127 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.206 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:18:36.206 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:18:36.206 -08 000000033 INF: ===================Camera #0 Frame #170===================
17-02-28 20:18:36.251 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.271 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:18:36.271 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:18:36.271 -08 000000038 INF: ===================Camera #2 Frame #172===================
17-02-28 20:18:36.378 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:18:36.378 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:18:36.378 -08 000000033 INF: ===================Camera #0 Frame #176===================
17-02-28 20:18:36.389 -08 000000058 INF: Y Motor: Unshifted Position: 2840623
17-02-28 20:18:36.439 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.440 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:18:36.440 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:18:36.440 -08 000000038 INF: ===================Camera #2 Frame #178===================
17-02-28 20:18:36.546 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:18:36.546 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:18:36.546 -08 000000033 INF: ===================Camera #0 Frame #182===================
17-02-28 20:18:36.565 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.609 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:18:36.609 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:18:36.609 -08 000000038 INF: ===================Camera #2 Frame #184===================
17-02-28 20:18:36.703 -08 000000058 INF: Y Motor: Unshifted Position: 2638469
17-02-28 20:18:36.714 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:18:36.714 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:18:36.714 -08 000000033 INF: ===================Camera #0 Frame #188===================
17-02-28 20:18:36.753 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.778 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:18:36.778 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:18:36.778 -08 000000038 INF: ===================Camera #2 Frame #191===================
17-02-28 20:18:36.877 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:36.882 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:18:36.882 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:18:36.882 -08 000000033 INF: ===================Camera #0 Frame #194===================
17-02-28 20:18:36.950 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:18:36.950 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:18:36.950 -08 000000038 INF: ===================Camera #2 Frame #197===================
17-02-28 20:18:37.015 -08 000000058 INF: Y Motor: Unshifted Position: 2435463
17-02-28 20:18:37.050 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:18:37.050 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:18:37.050 -08 000000033 INF: ===================Camera #0 Frame #201===================
17-02-28 20:18:37.065 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.119 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:18:37.119 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:18:37.119 -08 000000038 INF: ===================Camera #2 Frame #203===================
17-02-28 20:18:37.188 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.221 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:18:37.221 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:18:37.221 -08 000000033 INF: ===================Camera #0 Frame #207===================
17-02-28 20:18:37.288 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:18:37.288 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:18:37.288 -08 000000038 INF: ===================Camera #2 Frame #209===================
17-02-28 20:18:37.326 -08 000000058 INF: Y Motor: Unshifted Position: 2231358
17-02-28 20:18:37.376 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.389 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:18:37.389 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:18:37.389 -08 000000033 INF: ===================Camera #0 Frame #213===================
17-02-28 20:18:37.457 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:18:37.457 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:18:37.457 -08 000000038 INF: ===================Camera #2 Frame #216===================
17-02-28 20:18:37.499 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.557 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:18:37.557 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:18:37.557 -08 000000033 INF: ===================Camera #0 Frame #219===================
17-02-28 20:18:37.629 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:18:37.629 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:18:37.629 -08 000000038 INF: ===================Camera #2 Frame #222===================
17-02-28 20:18:37.637 -08 000000058 INF: Y Motor: Unshifted Position: 2028989
17-02-28 20:18:37.687 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.725 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:18:37.725 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:18:37.725 -08 000000033 INF: ===================Camera #0 Frame #225===================
17-02-28 20:18:37.798 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:18:37.798 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:18:37.798 -08 000000038 INF: ===================Camera #2 Frame #228===================
17-02-28 20:18:37.813 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:37.893 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:18:37.893 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:18:37.893 -08 000000033 INF: ===================Camera #0 Frame #232===================
17-02-28 20:18:37.950 -08 000000058 INF: Y Motor: Unshifted Position: 1825317
17-02-28 20:18:37.967 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:18:37.967 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:18:37.967 -08 000000038 INF: ===================Camera #2 Frame #234===================
17-02-28 20:18:38.000 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.064 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:18:38.064 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:18:38.064 -08 000000033 INF: ===================Camera #0 Frame #238===================
17-02-28 20:18:38.123 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.136 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:18:38.136 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:18:38.136 -08 000000038 INF: ===================Camera #2 Frame #241===================
17-02-28 20:18:38.232 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:18:38.232 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:18:38.232 -08 000000033 INF: ===================Camera #0 Frame #244===================
17-02-28 20:18:38.263 -08 000000058 INF: Y Motor: Unshifted Position: 1623173
17-02-28 20:18:38.308 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:18:38.308 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:18:38.308 -08 000000038 INF: ===================Camera #2 Frame #247===================
17-02-28 20:18:38.313 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.400 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:18:38.400 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:18:38.400 -08 000000033 INF: ===================Camera #0 Frame #250===================
17-02-28 20:18:38.437 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.477 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:18:38.477 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:18:38.477 -08 000000038 INF: ===================Camera #2 Frame #253===================
17-02-28 20:18:38.568 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:18:38.568 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:18:38.568 -08 000000033 INF: ===================Camera #0 Frame #256===================
17-02-28 20:18:38.572 -08 000000058 INF: Y Motor: Unshifted Position: 1420799
17-02-28 20:18:38.622 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.646 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:18:38.646 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:18:38.646 -08 000000038 INF: ===================Camera #2 Frame #259===================
17-02-28 20:18:38.736 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:18:38.736 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:18:38.736 -08 000000033 INF: ===================Camera #0 Frame #263===================
17-02-28 20:18:38.748 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.815 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:18:38.815 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:18:38.815 -08 000000038 INF: ===================Camera #2 Frame #266===================
17-02-28 20:18:38.884 -08 000000058 INF: Y Motor: Unshifted Position: 1216697
17-02-28 20:18:38.909 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:18:38.909 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:18:38.909 -08 000000033 INF: ===================Camera #0 Frame #269===================
17-02-28 20:18:38.934 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:38.990 -08 000000038 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:38.990 -08 000000038 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:38.990 -08 000000038 INF: ===================Camera #2 Frame #272===================
17-02-28 20:18:39.008 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:39.008 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:39.010 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:39.011 -08 000000108 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:39.011 -08 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:39.011 -08 000000108 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:39.011 -08 000000108 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:39.011 -08 000000108 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:39.011 -08 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:39.011 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:39.011 -08 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:39.011 -08 000000087 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:39.011 -08 000000108 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:39.012 -08 000000038 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:39.014 -08 000000087 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:39.060 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:39.181 -08 000000038 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:39.181 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:18:39.181 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:18:39.181 -08 000000033 INF: ===================Camera #0 Frame #272===================
17-02-28 20:18:39.181 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:18:39.191 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:18:39.192 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:39.198 -08 000000058 INF: Y Motor: Unshifted Position: 1013687
17-02-28 20:18:39.214 -08 000000038 INF: ======================================
17-02-28 20:18:39.248 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:39.325 -08 000000033 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:39.325 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:18:39.356 -08 000000033 INF: ======================================
17-02-28 20:18:39.357 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:18:39.359 -08 000000036 INF: ======================================
17-02-28 20:18:39.383 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:18:39.383 -08 000000108 INF: Excitation Filter 2: Moved 107 steps in 372.1336 ms
17-02-28 20:18:39.383 -08 000000108 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2678 ms
17-02-28 20:18:39.383 -08 000000108 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.3392 ms
17-02-28 20:18:39.384 -08 000000108 INF: ======================================
17-02-28 20:18:39.385 -08 000000058 INF: Y Motor: Unshifted Position: 983107
17-02-28 20:18:39.385 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:39.385 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:39.446 -08 000000050 INF: FPGA: Recv EX1MV
17-02-28 20:18:39.446 -08 000000087 INF: Excitation Filter 1: Moved 107 steps in 434.5649 ms
17-02-28 20:18:39.446 -08 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 434.6918 ms
17-02-28 20:18:39.446 -08 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 434.7693 ms
17-02-28 20:18:39.446 -08 000000087 INF: ======================================
17-02-28 20:18:39.447 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:39.447 -08 000000058 INF: Y Motor: Moved to 14.8311 after 7862 ms
17-02-28 20:18:39.447 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:39.447 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:39.448 -08 000000085 INF: ======================================
17-02-28 20:18:39.509 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:39.509 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:39.509 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:39.570 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:39.570 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:39.570 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:39.635 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:39.696 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:39.758 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:39.758 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:39.758 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:39.820 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:39.820 -08 000000058 INF: ======================================
17-02-28 20:18:39.821 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:39.822 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:39.823 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:39.823 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:39.882 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:39.882 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:39.944 -08 000000064 INF: FPGA: Recv TDIYERD 1483109
17-02-28 20:18:39.944 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:40.005 -08 000000025 INF: FPGA: Recv ZADCR 16873
17-02-28 20:18:40.005 -08 000000018 INF: At scan end Y pos = 14.831 and Z pos = -0.065. Y moved -48.539 mm
17-02-28 20:18:40.005 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:40.070 -08 000000085 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:18:40.070 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:18:40.070 -08 000000018 INF: TDIScan finished after 12628.3279 ms
17-02-28 20:18:40.070 -08 000000018 INF: Image[0]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:18:40.070 -08 000000018 INF: Image[2]: Y should trigger at 63.370 mm, 2nd row was at 64.279 mm (error = 0.909 mm)
17-02-28 20:18:40.072 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.106 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.901 um
17-02-28 20:18:40.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.107 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:40.132 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:40.132 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.133 -08 000000078 INF: ===================Dither Clean Up Command===================
17-02-28 20:18:40.133 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:40.133 -08 000000105 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:40.133 -08 000000109 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:40.134 -08 000000109 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:40.134 -08 000000086 INF: ======================================
17-02-28 20:18:40.134 -08 000000109 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:40.134 -08 000000105 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:40.134 -08 000000105 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:40.134 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:40.134 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:40.135 -08 000000053 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:18:40.138 -08 000000058 INF: ===================LFT:Extracting coords===================
17-02-28 20:18:40.166 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:40.166 -08 000000058 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:18:40.167 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.167 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.167 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.167 -08 000000072 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.168 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.168 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.168 -08 000000072 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.168 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:18:40.193 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:40.193 -08 000000066 INF: FPGA: Recv ZSEL 
17-02-28 20:18:40.193 -08 000000053 INF: FPGA: Xmit ZDACW 18059\n
17-02-28 20:18:40.193 -08 000000109 INF: ======================================
17-02-28 20:18:40.195 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:18:40.195 -08 000000105 INF: ======================================
17-02-28 20:18:40.244 -08 000000033 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.244 -08 000000072 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.244 -08 000000069 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.245 -08 000000064 INF: FC:A, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:18:40.255 -08 000000051 INF: FPGA: Recv ZDACW 
17-02-28 20:18:40.256 -08 000000053 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:18:40.256 -08 000000053 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:18:40.319 -08 000000105 INF: FPGA: Recv TDIBB
17-02-28 20:18:40.319 -08 000000053 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:18:40.320 -08 000000053 INF: ======================================
17-02-28 20:18:40.395 -08 000000072 INF: LFT found best fwhm score 2.000016 in 151 ms
17-02-28 20:18:40.396 -08 000000072 INF: LFT found good score at index 4149 with fwhm value 2.000016. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:40.396 -08 000000033 INF: LFT found best fwhm score 2.001238 in 151 ms
17-02-28 20:18:40.396 -08 000000033 INF: LFT found good score at index 697 with fwhm value 2.001238. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:40.396 -08 000000069 INF: LFT found best fwhm score 2.001391 in 152 ms
17-02-28 20:18:40.396 -08 000000069 INF: LFT found good score at index 781 with fwhm value 2.001391. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:3,B
17-02-28 20:18:40.396 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.396 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.396 -08 000000072 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.396 -08 000000033 INF: ======================================
17-02-28 20:18:40.396 -08 000000069 INF: ======================================
17-02-28 20:18:40.396 -08 000000072 INF: ======================================
17-02-28 20:18:40.397 -08 000000064 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:18:40.397 -08 000000064 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0483086517878208 in the next cycle, cycle 4 FC:A, C:3,L:3,B
17-02-28 20:18:40.398 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:18:40.398 -08 000000064 INF: ======================================
17-02-28 20:18:40.399 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:18:40.400 -08 000000058 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:3,B
17-02-28 20:18:40.400 -08 000000058 INF: ======================================
17-02-28 20:18:40.401 -08 000000078 INF: ======================================
17-02-28 20:18:40.402 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:40.403 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:40.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:40.405 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:40.405 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 12.20533 Y = 39.70494===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:18:40.406 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:18:40.428 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:18:40.428 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:40.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:40.429 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.429 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:18:40.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:18:40.430 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:18:40.478 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.479 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:40.479 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:40.493 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":3,"Tile":2202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF186","HCSMMF275","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.573 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:40.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.574 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:40.574 -08 000000018 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:40.574 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.577 -08 000000010 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:40.577 -08 000000010 INF: ======================================
17-02-28 20:18:40.579 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:40.579 -08 000000010 INF: ======================================
17-02-28 20:18:40.579 -08 000000030 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:40.580 -08 000000030 INF: ======================================
17-02-28 20:18:40.581 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.582 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:40.678 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":3,"Tile":2208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF207","HCSMMF190","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.680 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:18:40.680 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":3,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF243","HCSMMF255","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.682 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":3,"Tile":2207,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF284","HCSMMF201","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.683 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":3,"Tile":2201,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF257","HCSMMF176","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.690 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":3,"Tile":2209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF282","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.692 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":3,"Tile":2210,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF263","HCSMMF239","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.694 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":3,"Tile":2206,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF265","HCSMMF206","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.694 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:18:40.694 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:40.694 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:18:40.695 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":3,"Tile":2204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF272","HCSMMF253","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.696 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.697 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":3,"Tile":2211,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF230","HCSMMF199","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.699 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":3,"Tile":2213,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF277","HCSMMF271","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.700 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":3,"Tile":2212,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF184","HCSMMF273","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.701 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":3,"Tile":2205,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF249","HCSMMF187","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.701 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:18:40.702 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:18:40.702 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":3,"Tile":2214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF244","HCSMMF214","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.702 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:18:40.703 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":3,"Tile":2216,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF232","HCSMMF182","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.704 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":3,"Tile":2219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF209","HCSMMF196","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.705 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":3,"Tile":2222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF242","HCSMMF279","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.706 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":3,"Tile":2215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF266","HCSMMF183","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.707 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":3,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF254","HCSMMF250","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.709 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":3,"Tile":2220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF233","HCSMMF234","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.710 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":3,"Tile":2217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF197","HCSMMF256","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.712 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":3,"Tile":2221,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF237","HCSMMF222","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.714 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":3,"Tile":2224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF208","HCSMMF217","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.716 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":3,"Tile":2223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF280","HCSMMF251","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.718 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":3,"Tile":2228,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF269","HCSMMF287","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.721 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":3,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF188","HCSMMF228","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.722 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":3,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF204","HCSMMF252","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.724 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":3,"Tile":2227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF260","HCSMMF247","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:18:40.735 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.740 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:40.740 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.741 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:40.741 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0689 mm
17-02-28 20:18:40.741 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:40.741 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:18:40.803 -08 000000038 INF: FPGA: Recv ZTRG 
17-02-28 20:18:40.803 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:40.828 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.828 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:18:40.863 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:18:40.863 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:40.863 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:18:40.867 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.872 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:18:40.929 -08 000000030 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:40.929 -08 000000030 INF: FPGA: Recv ZMV 
17-02-28 20:18:40.929 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:40.929 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.8394 ms
17-02-28 20:18:40.929 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:40.973 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:40.979 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:18:40.990 -08 000000075 INF: FPGA: Recv ZDACR 60292
17-02-28 20:18:40.990 -08 000000018 INF: Z Motor: MoveAndTrigger took 249.5186 ms w/comms
17-02-28 20:18:40.990 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:40.990 -08 000000018 INF: Z Motor: MoveAbsStepped took 249.6969 ms
17-02-28 20:18:40.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:40.991 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.000 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:18:41.000 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:18:41.052 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:41.064 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:41.070 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:18:41.073 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:41.073 -08 000000018 INF: Transformed XStagePosition from 14.43393 mm to 14.4339303970337 mm.
17-02-28 20:18:41.082 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:18:41.082 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.082 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:18:41.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:41.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:41.084 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:41.084 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:18:41.085 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:41.085 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:41.086 -08 000000036 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:41.086 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:18:41.087 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:41.087 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:41.087 -08 000000034 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:41.087 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:41.087 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:41.088 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:41.088 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:41.088 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:41.088 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:41.089 -08 000000050 INF: ===================Move X Motor without settling===================
17-02-28 20:18:41.089 -08 000000075 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:41.089 -08 000000050 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:41.089 -08 000000075 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8311 mm
17-02-28 20:18:41.089 -08 000000075 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:41.089 -08 000000075 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:41.089 -08 000000039 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:41.089 -08 000000057 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000108 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:41.089 -08 000000081 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:41.089 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:41.089 -08 000000073 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:41.090 -08 000000039 INF: ======================================
17-02-28 20:18:41.090 -08 000000073 INF: ======================================
17-02-28 20:18:41.090 -08 000000081 INF: ======================================
17-02-28 20:18:41.090 -08 000000087 INF: ======================================
17-02-28 20:18:41.091 -08 000000057 INF: ======================================
17-02-28 20:18:41.091 -08 000000085 INF: ======================================
17-02-28 20:18:41.091 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:41.091 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:41.092 -08 000000010 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:41.092 -08 000000010 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:41.092 -08 000000058 INF: ======================================
17-02-28 20:18:41.093 -08 000000108 INF: ======================================
17-02-28 20:18:41.093 -08 000000010 INF: ======================================
17-02-28 20:18:41.093 -08 000000086 INF: ======================================
17-02-28 20:18:41.094 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:41.094 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:41.095 -08 000000052 INF: ======================================
17-02-28 20:18:41.096 -08 000000025 INF: ======================================
17-02-28 20:18:41.097 -08 000000036 INF: ======================================
17-02-28 20:18:41.116 -08 000000050 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:41.116 -08 000000050 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:41.161 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:41.178 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.178 -08 000000075 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:41.178 -08 000000075 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Moving to 14.4339 mm @15.000 mm/sec, started at 12.2300 mm
17-02-28 20:18:41.178 -08 000000050 INF: X Motor: Xmit MA -18254\n
17-02-28 20:18:41.240 -08 000000050 INF: X Motor: Recv MA -18254\r\n>
17-02-28 20:18:41.240 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.240 -08 000000075 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:41.240 -08 000000050 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:18:41.302 -08 000000075 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:18:41.364 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.364 -08 000000075 INF: Y Motor: Start the move command
17-02-28 20:18:41.364 -08 000000075 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:41.429 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:41.429 -08 000000075 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:18:41.429 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:18:41.553 -08 000000075 INF: Y Motor: Unshifted Position: 1068480
17-02-28 20:18:41.603 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.727 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.863 -08 000000075 INF: Y Motor: Unshifted Position: 1772282
17-02-28 20:18:41.863 -08 000000050 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:41.913 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:41.933 -08 000000050 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:41.933 -08 000000050 INF: X Motor: Moved to 14.4346 after 693 ms
17-02-28 20:18:41.933 -08 000000050 INF: ======================================
17-02-28 20:18:42.038 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.178 -08 000000075 INF: Y Motor: Unshifted Position: 2557293
17-02-28 20:18:42.228 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.351 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.487 -08 000000075 INF: Y Motor: Unshifted Position: 3333073
17-02-28 20:18:42.537 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.662 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.801 -08 000000075 INF: Y Motor: Unshifted Position: 4118973
17-02-28 20:18:42.851 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:42.974 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.113 -08 000000075 INF: Y Motor: Unshifted Position: 4898907
17-02-28 20:18:43.163 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.288 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.423 -08 000000075 INF: Y Motor: Unshifted Position: 5675605
17-02-28 20:18:43.473 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.598 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:43.737 -08 000000075 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:18:43.737 -08 000000075 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:43.737 -08 000000075 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:43.799 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:43.799 -08 000000075 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:18:43.799 -08 000000075 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:43.861 -08 000000075 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:43.861 -08 000000075 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:43.861 -08 000000075 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:43.926 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:43.926 -08 000000075 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:43.926 -08 000000075 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:43.987 -08 000000075 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: Recv v 0\r
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:44.051 -08 000000075 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:44.110 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:44.110 -08 000000075 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:44.110 -08 000000075 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:44.172 -08 000000075 INF: Y Motor: Recv ok\r
17-02-28 20:18:44.172 -08 000000075 INF: ======================================
17-02-28 20:18:44.173 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:18:44.174 -08 000000034 INF: ======================================
17-02-28 20:18:44.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:44.176 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:44.177 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:18:44.177 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:18:44.237 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:44.237 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:18:44.300 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:44.300 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:44.300 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:44.301 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:44.360 -08 000000073 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:18:44.360 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:18:44.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:44.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:44.362 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.362 -08 000000087 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:44.363 -08 000000087 INF: ======================================
17-02-28 20:18:44.363 -08 000000025 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:44.363 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.365 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:44.365 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:44.366 -08 000000025 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:18:44.421 -08 000000064 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:44.421 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:44.423 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:44.423 -08 000000025 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:18:44.483 -08 000000053 INF: FPGA: Recv TDIYARM2
17-02-28 20:18:44.484 -08 000000025 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:18:44.486 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.487 -08 000000025 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:44.487 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:44.489 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:44.490 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:44.491 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:44.860 -08 000000025 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:44.860 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:44.860 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:44.875 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:44.877 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:45.262 -08 000000025 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:18:45.262 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:18:45.262 -08 000000025 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:45.277 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:18:45.279 -08 000000025 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:18:45.280 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:45.281 -08 000000025 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:45.282 -08 000000025 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:45.282 -08 000000025 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:45.284 -08 000000025 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:45.284 -08 000000025 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:45.284 -08 000000025 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:18:45.284 -08 000000025 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:18:45.294 -08 000000089 INF: FPGA: Recv ZYT 
17-02-28 20:18:45.294 -08 000000025 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:18:45.294 -08 000000025 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:18:45.356 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:18:45.356 -08 000000025 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.7865 ms
17-02-28 20:18:45.356 -08 000000025 INF: Z Motor: ArmAbsStepped took 72.0977 ms
17-02-28 20:18:45.357 -08 000000025 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:45.358 -08 000000025 INF: ===================TDI Scan Setup===================
17-02-28 20:18:45.359 -08 000000025 INF: ======================================
17-02-28 20:18:45.360 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:45.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:45.361 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.363 -08 000000086 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:45.363 -08 000000064 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:45.364 -08 000000086 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:45.364 -08 000000086 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:45.364 -08 000000086 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:45.364 -08 000000064 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:45.364 -08 000000086 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:45.364 -08 000000064 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:45.364 -08 000000064 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:45.367 -08 000000064 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:45.731 -08 000000050 INF: FPGA: Recv EX2MV
17-02-28 20:18:45.731 -08 000000050 INF: FPGA: Recv EX1MV
17-02-28 20:18:45.731 -08 000000064 INF: Excitation Filter 1: Moved -107 steps in 367.0933 ms
17-02-28 20:18:45.731 -08 000000064 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.3659 ms
17-02-28 20:18:45.731 -08 000000064 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.4898 ms
17-02-28 20:18:45.731 -08 000000086 INF: Excitation Filter 2: Moved -107 steps in 367.3462 ms
17-02-28 20:18:45.731 -08 000000086 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7773 ms
17-02-28 20:18:45.731 -08 000000086 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8662 ms
17-02-28 20:18:45.732 -08 000000064 INF: ======================================
17-02-28 20:18:45.732 -08 000000086 INF: ======================================
17-02-28 20:18:45.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:45.736 -08 000000045 INF: ===================Serial===================
17-02-28 20:18:45.736 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:18:45.737 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:45.737 -08 000000078 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:45.737 -08 000000045 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:18:45.737 -08 000000078 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:18:45.737 -08 000000089 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:45.737 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:45.737 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:45.738 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:45.738 -08 000000045 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:45.739 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:45.739 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:45.739 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:18:45.740 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.740 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.741 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.741 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.795 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:45.795 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:45.795 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:45.857 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:45.857 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:45.890 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.890 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.891 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:45.891 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:18:45.919 -08 000000078 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:18:45.983 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:45.983 -08 000000078 INF: Y Motor: Start the move command
17-02-28 20:18:45.983 -08 000000078 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:46.040 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.040 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.041 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.041 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.044 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:46.044 -08 000000078 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:18:46.044 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.171 -08 000000078 INF: Y Motor: Unshifted Position: 5929184
17-02-28 20:18:46.190 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.190 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.191 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:46.191 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:46.221 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.341 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:46.341 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:46.341 -08 000000090 INF: ===================Camera #0 Frame #1===================
17-02-28 20:18:46.342 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:18:46.342 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:18:46.342 -08 000000101 INF: ===================Camera #2 Frame #1===================
17-02-28 20:18:46.346 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.482 -08 000000078 INF: Y Motor: Unshifted Position: 5882180
17-02-28 20:18:46.494 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:46.494 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:46.494 -08 000000090 INF: ===================Camera #0 Frame #3===================
17-02-28 20:18:46.497 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:18:46.497 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:18:46.497 -08 000000101 INF: ===================Camera #2 Frame #3===================
17-02-28 20:18:46.532 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.651 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:46.651 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:46.652 -08 000000090 INF: ===================Camera #0 Frame #4===================
17-02-28 20:18:46.653 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:46.653 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:46.653 -08 000000101 INF: ===================Camera #2 Frame #4===================
17-02-28 20:18:46.659 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.795 -08 000000078 INF: Y Motor: Unshifted Position: 5835174
17-02-28 20:18:46.807 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:46.807 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:46.807 -08 000000101 INF: ===================Camera #2 Frame #5===================
17-02-28 20:18:46.808 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:18:46.808 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:18:46.808 -08 000000090 INF: ===================Camera #0 Frame #5===================
17-02-28 20:18:46.845 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.855 -08 000000039 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:46.855 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:18:46.855 -08 000000045 INF: ===================Serial===================
17-02-28 20:18:46.856 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:46.857 -08 000000045 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:18:46.857 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:18:46.857 -08 000000045 INF: ===================Serial===================
17-02-28 20:18:46.858 -08 000000053 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:18:46.858 -08 000000035 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:18:46.859 -08 000000053 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:18:46.859 -08 000000053 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:18:46.859 -08 000000053 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:18:46.859 -08 000000035 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:18:46.859 -08 000000053 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:18:46.859 -08 000000035 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:18:46.859 -08 000000035 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:18:46.859 -08 000000045 INF: ======================================
17-02-28 20:18:46.860 -08 000000035 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:18:46.960 -08 000000101 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:46.960 -08 000000101 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:46.960 -08 000000101 INF: ===================Camera #2 Frame #6===================
17-02-28 20:18:46.961 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:18:46.961 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:18:46.961 -08 000000090 INF: ===================Camera #0 Frame #6===================
17-02-28 20:18:46.963 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:46.964 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:18:46.964 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:46.965 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:18:46.969 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:46.991 -08 000000101 INF: Camera #2 ReleaseBuffer
17-02-28 20:18:46.991 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:46.992 -08 000000101 INF: ======================================
17-02-28 20:18:47.016 -08 000000090 INF: Camera #0 ReleaseBuffer
17-02-28 20:18:47.016 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:18:47.018 -08 000000090 INF: ======================================
17-02-28 20:18:47.020 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:18:47.022 -08 000000089 INF: ======================================
17-02-28 20:18:47.108 -08 000000078 INF: Y Motor: Unshifted Position: 5790763
17-02-28 20:18:47.158 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:47.230 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:18:47.230 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:18:47.230 -08 000000053 INF: Excitation Filter 1: Moved 107 steps in 371.4424 ms
17-02-28 20:18:47.230 -08 000000053 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.574 ms
17-02-28 20:18:47.230 -08 000000053 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.658 ms
17-02-28 20:18:47.230 -08 000000035 INF: Excitation Filter 2: Moved 107 steps in 371.3124 ms
17-02-28 20:18:47.230 -08 000000035 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8352 ms
17-02-28 20:18:47.230 -08 000000035 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.91 ms
17-02-28 20:18:47.231 -08 000000053 INF: ======================================
17-02-28 20:18:47.231 -08 000000035 INF: ======================================
17-02-28 20:18:47.232 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:47.233 -08 000000047 INF: ======================================
17-02-28 20:18:47.294 -08 000000078 INF: Y Motor: Unshifted Position: 5790745
17-02-28 20:18:47.294 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:47.294 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:47.357 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:47.357 -08 000000078 INF: Y Motor: Moved to 62.9075 after 1312 ms
17-02-28 20:18:47.357 -08 000000078 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:47.419 -08 000000078 INF: Y Motor: Recv v 4097\r
17-02-28 20:18:47.419 -08 000000078 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:47.419 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:47.481 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:47.481 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:47.481 -08 000000078 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: Recv v 134217728\r
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:47.543 -08 000000078 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:47.605 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:47.667 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:47.667 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:47.667 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:47.732 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:18:47.732 -08 000000078 INF: ======================================
17-02-28 20:18:47.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:47.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:18:47.735 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:47.736 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:18:47.792 -08 000000090 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:18:47.792 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:47.854 -08 000000108 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:18:47.854 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:18:47.916 -08 000000064 INF: FPGA: Recv ZADCR 2425
17-02-28 20:18:47.916 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:18:47.916 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:18:47.978 -08 000000053 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:18:47.978 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:18:47.978 -08 000000018 INF: TDIScan finished after 6904.4339 ms
17-02-28 20:18:47.978 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:47.978 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:18:47.978 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:18:48.040 -08 000000109 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:18:48.041 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.042 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:18:48.042 -08 000000047 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:18:48.043 -08 000000060 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:18:48.043 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:18:48.043 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:18:48.043 -08 000000087 INF: ======================================
17-02-28 20:18:48.043 -08 000000060 INF: ======================================
17-02-28 20:18:48.104 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:18:48.104 -08 000000047 INF: ======================================
17-02-28 20:18:48.105 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.107 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:18:48.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.155 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:18:48.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:18:48.230 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.230 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:18:48.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:18:48.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:48.270 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:48.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:18:48.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:48.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:18:48.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:18:48.914 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:18:48.936 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0494461203072321Best Z position at top surface = -0.120388349514563Best Z position at top surface + compensator offset = -0.0976883495145631 C:3,L:4,B
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.120388349514563
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72318
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0494461203072321
17-02-28 20:18:48.938 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.38162
17-02-28 20:18:48.938 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0494461203072321.
17-02-28 20:18:48.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:49.071 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:18:49.071 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:18:49.100 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:49.100 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:18:49.101 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.102 -08 000000018 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:18:49.102 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.103 -08 000000057 INF: ===================Move Tilt Motor 2===================
17-02-28 20:18:49.103 -08 000000025 INF: ===================Move Tilt Motor 1===================
17-02-28 20:18:49.104 -08 000000051 INF: ===================Move Tilt Motor 3===================
17-02-28 20:18:49.104 -08 000000025 INF: ======================================
17-02-28 20:18:49.104 -08 000000051 INF: ======================================
17-02-28 20:18:49.105 -08 000000057 INF: ======================================
17-02-28 20:18:49.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.106 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.107 -08 000000018 INF: ETF Best Z: -0.04944612 mm (12962 DAC)
17-02-28 20:18:49.107 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.108 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.108 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:18:49.108 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.109 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:18:49.115 -08 000000018 INF: Swath 1 position calculated to be: {X=13.86234, Y=39.70494} from estimated center X= 14.357, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:49.115 -08 000000018 INF: Swath 2 position calculated to be: {X=14.97034, Y=39.70494} from estimated center X= 14.357, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:18:49.544 -08 000000018 INF: Swath 0: Converted transform from (94.98832, -37.32796) pixels to (0.032775, -0.012765) mm.
17-02-28 20:18:49.550 -08 000000018 INF: Swath 1: Converted transform from (74.5028, -34.32217) pixels to (0.025875, -0.01173) mm.
17-02-28 20:18:49.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:18:49.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:18:49.551 -08 000000018 INF: Transformed XStagePosition from 13.86234 mm to 13.8951102048159 mm.
17-02-28 20:18:49.563 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4821807401031 mm.
17-02-28 20:18:49.563 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2821807401031 mm.
17-02-28 20:18:49.563 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3729307401031 mm.
17-02-28 20:18:49.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:49.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:18:49.565 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:49.566 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:18:49.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:49.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:49.573 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:18:49.573 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:49.573 -08 000000077 INF: ===================MoveEmissionFilters===================
17-02-28 20:18:49.574 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:18:49.574 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:18:49.574 -08 000000053 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:18:49.574 -08 000000053 INF: Z Motor: Moving to -0.0694 mm, started at -0.0100 mm
17-02-28 20:18:49.574 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:49.574 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:49.574 -08 000000053 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:18:49.574 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:49.574 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:49.575 -08 000000073 INF: ===================Move X Motor without settling===================
17-02-28 20:18:49.575 -08 000000073 INF: X Motor: Xmit PR VM\n
17-02-28 20:18:49.575 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:49.575 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:49.575 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:49.575 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:18:49.575 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:18:49.576 -08 000000058 INF: Y Motor: Moving to 64.4822 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:18:49.576 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:49.576 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:49.576 -08 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:18:49.576 -08 000000047 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:18:49.576 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:18:49.576 -08 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:18:49.576 -08 000000108 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:18:49.576 -08 000000081 INF: ======================================
17-02-28 20:18:49.577 -08 000000090 INF: ======================================
17-02-28 20:18:49.577 -08 000000108 INF: ======================================
17-02-28 20:18:49.577 -08 000000030 INF: ======================================
17-02-28 20:18:49.577 -08 000000047 INF: ======================================
17-02-28 20:18:49.578 -08 000000010 INF: ======================================
17-02-28 20:18:49.578 -08 000000057 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:18:49.579 -08 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:18:49.579 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:18:49.579 -08 000000078 INF: ======================================
17-02-28 20:18:49.579 -08 000000057 INF: ======================================
17-02-28 20:18:49.580 -08 000000087 INF: ======================================
17-02-28 20:18:49.580 -08 000000025 INF: ======================================
17-02-28 20:18:49.580 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:18:49.581 -08 000000051 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:18:49.582 -08 000000069 INF: ======================================
17-02-28 20:18:49.582 -08 000000051 INF: ======================================
17-02-28 20:18:49.583 -08 000000077 INF: ======================================
17-02-28 20:18:49.601 -08 000000066 INF: FPGA: Recv ZTRG 
17-02-28 20:18:49.601 -08 000000053 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:18:49.603 -08 000000073 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:18:49.603 -08 000000073 INF: X Motor: Xmit PR VI\n
17-02-28 20:18:49.603 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.603 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:49.603 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:49.663 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:18:49.663 -08 000000053 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:18:49.663 -08 000000053 INF: FPGA: Xmit ZMV 18205\n
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:18:49.665 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Moving to 13.8951 mm @15.000 mm/sec, started at 14.4346 mm
17-02-28 20:18:49.665 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:49.665 -08 000000073 INF: X Motor: Xmit MA -18475\n
17-02-28 20:18:49.726 -08 000000072 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:18:49.726 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:49.727 -08 000000073 INF: X Motor: Recv MA -18475\r\n>
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Set target position to 5948218 encoder counts
17-02-28 20:18:49.727 -08 000000058 INF: Y Motor: Xmit s r0xca 5948218\r
17-02-28 20:18:49.727 -08 000000073 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:18:49.787 -08 000000060 INF: FPGA: Recv ZMV 
17-02-28 20:18:49.787 -08 000000053 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.0656 ms
17-02-28 20:18:49.787 -08 000000053 INF: FPGA: Xmit ZDACR\n
17-02-28 20:18:49.791 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.791 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:18:49.791 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:49.849 -08 000000052 INF: FPGA: Recv ZDACR 18205
17-02-28 20:18:49.849 -08 000000053 INF: Z Motor: MoveAndTrigger took 274.8483 ms w/comms
17-02-28 20:18:49.849 -08 000000053 INF: Z Motor: After move to -0.0694, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:18:49.849 -08 000000053 INF: Z Motor: MoveAbsStepped took 275.0855 ms
17-02-28 20:18:49.850 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:49.851 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:49.851 -08 000000058 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:18:49.851 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:49.851 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:18:49.852 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:49.852 -08 000000064 INF: ===================Camera Arm TDI===================
17-02-28 20:18:49.853 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:49.853 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:49.853 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:49.854 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:49.854 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:49.854 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:18:49.914 -08 000000057 INF: FPGA: Recv ZSEL 
17-02-28 20:18:49.915 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:49.915 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:18:49.976 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:18:49.976 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:18:49.977 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:18:49.978 -08 000000058 INF: Y Motor: Unshifted Position: 5873049
17-02-28 20:18:49.978 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:49.979 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:18:49.979 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:18:49.980 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:18:50.028 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:50.037 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:18:50.037 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:50.039 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:18:50.039 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:50.041 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:18:50.041 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:18:50.041 -08 000000087 INF: Z Motor: Arming to move to -0.0294 mm
17-02-28 20:18:50.041 -08 000000087 INF: FPGA: Xmit ZYT 6428218 4\n
17-02-28 20:18:50.099 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:18:50.099 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6373049 enc / 63.730 mm / ) = 6428218 enc / 64.282 mm
17-02-28 20:18:50.099 -08 000000087 INF: FPGA: Xmit ZARM 7719\n
17-02-28 20:18:50.151 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:50.161 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:18:50.161 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8572 ms
17-02-28 20:18:50.161 -08 000000087 INF: Z Motor: ArmAbsStepped took 119.9292 ms
17-02-28 20:18:50.161 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:18:50.163 -08 000000073 INF: X Motor: Xmit PR ER\n
17-02-28 20:18:50.163 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:50.164 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:18:50.165 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:50.166 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:18:50.166 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:18:50.168 -08 000000087 INF: ======================================
17-02-28 20:18:50.228 -08 000000073 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:18:50.228 -08 000000073 INF: X Motor: Moved to 13.8950 after 500 ms
17-02-28 20:18:50.228 -08 000000073 INF: ======================================
17-02-28 20:18:50.290 -08 000000058 INF: Y Motor: Unshifted Position: 5948219
17-02-28 20:18:50.290 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:18:50.290 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:50.352 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:50.352 -08 000000058 INF: Y Motor: Moved to 64.4822 after 501 ms
17-02-28 20:18:50.352 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:18:50.414 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:18:50.414 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:18:50.414 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:50.476 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:50.476 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:50.476 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:18:50.538 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:18:50.600 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:50.662 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:50.662 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:18:50.662 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:50.727 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:18:50.727 -08 000000058 INF: ======================================
17-02-28 20:18:50.728 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:18:50.729 -08 000000105 INF: ======================================
17-02-28 20:18:50.796 -08 000000064 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:50.796 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:50.796 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:50.811 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:50.813 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:18:51.835 -08 000000064 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:18:51.835 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:18:51.836 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:18:51.851 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:18:51.853 -08 000000064 INF: ===================Camera Arm TDI===================
17-02-28 20:18:51.854 -08 000000064 INF: ======================================
17-02-28 20:18:51.855 -08 000000053 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:18:51.856 -08 000000053 INF: ======================================
17-02-28 20:18:51.857 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:18:51.858 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:51.858 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:18:51.858 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:18:51.911 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:18:51.911 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:18:51.971 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:18:51.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:18:51.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:51.971 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:18:52.034 -08 000000025 INF: FPGA: Recv TDIYERD 6448219
17-02-28 20:18:52.034 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448219 counts (64.482 mm)
17-02-28 20:18:52.034 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:52.035 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:52.035 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:52.035 -08 000000060 INF: ===================Set YMotor gains for scans===================
17-02-28 20:18:52.036 -08 000000060 INF: ======================================
17-02-28 20:18:52.036 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:52.037 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:18:52.037 -08 000000051 INF: FPGA: Xmit TDIYPOS 6337293\n
17-02-28 20:18:52.096 -08 000000072 INF: FPGA: Recv TDIYPOS
17-02-28 20:18:52.096 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:52.097 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:18:52.098 -08 000000051 INF: FPGA: Xmit TDIYARM3 139264 6428218 1 1\n
17-02-28 20:18:52.158 -08 000000035 INF: FPGA: Recv TDIYARM3
17-02-28 20:18:52.158 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:18:52.159 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:18:52.160 -08 000000051 INF: ======================================
17-02-28 20:18:52.161 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:18:52.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:18:52.162 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.163 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.164 -08 000000109 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:18:52.164 -08 000000075 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:18:52.164 -08 000000109 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:18:52.164 -08 000000109 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:18:52.164 -08 000000109 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:18:52.164 -08 000000109 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:18:52.164 -08 000000075 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:18:52.164 -08 000000075 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:18:52.164 -08 000000075 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:18:52.165 -08 000000075 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:18:52.533 -08 000000057 INF: FPGA: Recv EX2MV
17-02-28 20:18:52.533 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:18:52.533 -08 000000109 INF: Excitation Filter 2: Moved -107 steps in 368.7368 ms
17-02-28 20:18:52.533 -08 000000075 INF: Excitation Filter 1: Moved -107 steps in 368.6136 ms
17-02-28 20:18:52.533 -08 000000109 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.8402 ms
17-02-28 20:18:52.533 -08 000000109 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.9448 ms
17-02-28 20:18:52.533 -08 000000075 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7433 ms
17-02-28 20:18:52.533 -08 000000075 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9246 ms
17-02-28 20:18:52.533 -08 000000109 INF: ======================================
17-02-28 20:18:52.533 -08 000000075 INF: ======================================
17-02-28 20:18:52.534 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.535 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:18:52.536 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:18:52.536 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:18:52.536 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:18:52.536 -08 000000066 INF: ===================FPGA Z Wait===================
17-02-28 20:18:52.537 -08 000000066 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:18:52.537 -08 000000069 INF: Y Motor: Moving to 14.8338 mm @6.500 mm/sec, started at 64.4822 mm
17-02-28 20:18:52.537 -08 000000101 INF: ===================Camera TDI, Parallel===================
17-02-28 20:18:52.537 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:18:52.537 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:18:52.537 -08 000000077 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:18:52.538 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:18:52.538 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:18:52.539 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.539 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.540 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.540 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.543 -08 000000077 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:18:52.597 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.597 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:18:52.597 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:18:52.660 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.660 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:18:52.690 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.690 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.690 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.690 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Set target position to 983384 encoder counts
17-02-28 20:18:52.724 -08 000000069 INF: Y Motor: Xmit s r0xca 983384\r
17-02-28 20:18:52.786 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.786 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:18:52.786 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:18:52.840 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.840 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:18:52.840 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.840 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:18:52.849 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:18:52.849 -08 000000069 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:18:52.849 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:52.908 -08 000000045 INF: FPGA: Recv ZWAIT 
17-02-28 20:18:52.908 -08 000000066 INF: ======================================
17-02-28 20:18:52.972 -08 000000069 INF: Y Motor: Unshifted Position: 5886578
17-02-28 20:18:52.990 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:52.990 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:18:52.990 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:52.990 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:18:52.990 -08 000000078 INF: ===================Camera #0 Frame #4===================
17-02-28 20:18:52.990 -08 000000052 INF: ===================Camera #2 Frame #4===================
17-02-28 20:18:53.022 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.150 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.152 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:18:53.152 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:18:53.152 -08 000000078 INF: ===================Camera #0 Frame #10===================
17-02-28 20:18:53.153 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:18:53.153 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:18:53.153 -08 000000052 INF: ===================Camera #2 Frame #10===================
17-02-28 20:18:53.284 -08 000000069 INF: Y Motor: Unshifted Position: 5683561
17-02-28 20:18:53.320 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:53.320 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:53.320 -08 000000078 INF: ===================Camera #0 Frame #17===================
17-02-28 20:18:53.322 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:18:53.322 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:18:53.322 -08 000000052 INF: ===================Camera #2 Frame #17===================
17-02-28 20:18:53.334 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.458 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.491 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:53.491 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:53.491 -08 000000078 INF: ===================Camera #0 Frame #23===================
17-02-28 20:18:53.494 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:18:53.494 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:18:53.494 -08 000000052 INF: ===================Camera #2 Frame #23===================
17-02-28 20:18:53.597 -08 000000069 INF: Y Motor: Unshifted Position: 5480122
17-02-28 20:18:53.647 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.659 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:53.659 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:53.659 -08 000000078 INF: ===================Camera #0 Frame #29===================
17-02-28 20:18:53.663 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:18:53.663 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:18:53.663 -08 000000052 INF: ===================Camera #2 Frame #29===================
17-02-28 20:18:53.772 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.827 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:18:53.827 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:18:53.827 -08 000000078 INF: ===================Camera #0 Frame #35===================
17-02-28 20:18:53.832 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:18:53.832 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:18:53.832 -08 000000052 INF: ===================Camera #2 Frame #35===================
17-02-28 20:18:53.907 -08 000000069 INF: Y Motor: Unshifted Position: 5278400
17-02-28 20:18:53.957 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:53.995 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 40, frameCount = 41.
17-02-28 20:18:53.995 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 41
17-02-28 20:18:53.995 -08 000000078 INF: ===================Camera #0 Frame #41===================
17-02-28 20:18:54.001 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:18:54.001 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:18:54.001 -08 000000052 INF: ===================Camera #2 Frame #42===================
17-02-28 20:18:54.084 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.163 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:54.163 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:54.163 -08 000000078 INF: ===================Camera #0 Frame #48===================
17-02-28 20:18:54.174 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:18:54.174 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:18:54.174 -08 000000052 INF: ===================Camera #2 Frame #48===================
17-02-28 20:18:54.221 -08 000000069 INF: Y Motor: Unshifted Position: 5074085
17-02-28 20:18:54.271 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.335 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:18:54.335 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:18:54.335 -08 000000078 INF: ===================Camera #0 Frame #54===================
17-02-28 20:18:54.344 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:18:54.344 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:18:54.344 -08 000000052 INF: ===================Camera #2 Frame #54===================
17-02-28 20:18:54.395 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.504 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:18:54.504 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:18:54.504 -08 000000078 INF: ===================Camera #0 Frame #60===================
17-02-28 20:18:54.514 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:18:54.514 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:18:54.514 -08 000000052 INF: ===================Camera #2 Frame #61===================
17-02-28 20:18:54.531 -08 000000069 INF: Y Motor: Unshifted Position: 4872583
17-02-28 20:18:54.581 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.673 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 65, frameCount = 66.
17-02-28 20:18:54.673 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 66
17-02-28 20:18:54.673 -08 000000078 INF: ===================Camera #0 Frame #66===================
17-02-28 20:18:54.687 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:18:54.687 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:18:54.687 -08 000000052 INF: ===================Camera #2 Frame #67===================
17-02-28 20:18:54.708 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:54.842 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:18:54.842 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:18:54.842 -08 000000078 INF: ===================Camera #0 Frame #73===================
17-02-28 20:18:54.844 -08 000000069 INF: Y Motor: Unshifted Position: 4668920
17-02-28 20:18:54.858 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:18:54.858 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:18:54.858 -08 000000052 INF: ===================Camera #2 Frame #73===================
17-02-28 20:18:54.894 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.014 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:18:55.014 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:18:55.015 -08 000000078 INF: ===================Camera #0 Frame #79===================
17-02-28 20:18:55.018 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.028 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:18:55.028 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:18:55.028 -08 000000052 INF: ===================Camera #2 Frame #80===================
17-02-28 20:18:55.157 -08 000000069 INF: Y Motor: Unshifted Position: 4465455
17-02-28 20:18:55.184 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:18:55.184 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:18:55.184 -08 000000078 INF: ===================Camera #0 Frame #85===================
17-02-28 20:18:55.201 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:18:55.201 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:18:55.201 -08 000000052 INF: ===================Camera #2 Frame #86===================
17-02-28 20:18:55.207 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.331 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.354 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:18:55.354 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:18:55.354 -08 000000078 INF: ===================Camera #0 Frame #92===================
17-02-28 20:18:55.371 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:18:55.371 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:18:55.371 -08 000000052 INF: ===================Camera #2 Frame #92===================
17-02-28 20:18:55.469 -08 000000069 INF: Y Motor: Unshifted Position: 4263738
17-02-28 20:18:55.519 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.527 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:18:55.527 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:18:55.527 -08 000000078 INF: ===================Camera #0 Frame #98===================
17-02-28 20:18:55.541 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:18:55.541 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:18:55.541 -08 000000052 INF: ===================Camera #2 Frame #98===================
17-02-28 20:18:55.644 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.696 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:18:55.696 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:18:55.696 -08 000000078 INF: ===================Camera #0 Frame #104===================
17-02-28 20:18:55.711 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:18:55.711 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:18:55.711 -08 000000052 INF: ===================Camera #2 Frame #105===================
17-02-28 20:18:55.780 -08 000000069 INF: Y Motor: Unshifted Position: 4060286
17-02-28 20:18:55.830 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:55.865 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:18:55.865 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:18:55.865 -08 000000078 INF: ===================Camera #0 Frame #110===================
17-02-28 20:18:55.885 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:18:55.885 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:18:55.885 -08 000000052 INF: ===================Camera #2 Frame #111===================
17-02-28 20:18:55.954 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.035 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:18:56.035 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:18:56.035 -08 000000078 INF: ===================Camera #0 Frame #117===================
17-02-28 20:18:56.056 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:18:56.056 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:18:56.056 -08 000000052 INF: ===================Camera #2 Frame #117===================
17-02-28 20:18:56.093 -08 000000069 INF: Y Motor: Unshifted Position: 3856620
17-02-28 20:18:56.143 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.208 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:18:56.208 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:18:56.208 -08 000000078 INF: ===================Camera #0 Frame #123===================
17-02-28 20:18:56.227 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:18:56.227 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:18:56.227 -08 000000052 INF: ===================Camera #2 Frame #124===================
17-02-28 20:18:56.269 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.378 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:18:56.378 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:18:56.378 -08 000000078 INF: ===================Camera #0 Frame #129===================
17-02-28 20:18:56.403 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:18:56.403 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:18:56.403 -08 000000052 INF: ===================Camera #2 Frame #130===================
17-02-28 20:18:56.405 -08 000000069 INF: Y Motor: Unshifted Position: 3654467
17-02-28 20:18:56.455 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.546 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:18:56.546 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:18:56.546 -08 000000078 INF: ===================Camera #0 Frame #135===================
17-02-28 20:18:56.573 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:18:56.573 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:18:56.573 -08 000000052 INF: ===================Camera #2 Frame #136===================
17-02-28 20:18:56.577 -08 000000064 INF: RunCopyService queue size at 2/28/2017 8:18:56 PM is 2
17-02-28 20:18:56.579 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.716 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:18:56.716 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:18:56.716 -08 000000078 INF: ===================Camera #0 Frame #142===================
17-02-28 20:18:56.718 -08 000000069 INF: Y Motor: Unshifted Position: 3450798
17-02-28 20:18:56.743 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:18:56.743 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:18:56.743 -08 000000052 INF: ===================Camera #2 Frame #143===================
17-02-28 20:18:56.768 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.888 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:18:56.888 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:18:56.888 -08 000000078 INF: ===================Camera #0 Frame #148===================
17-02-28 20:18:56.892 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:56.917 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:18:56.917 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:18:56.917 -08 000000052 INF: ===================Camera #2 Frame #149===================
17-02-28 20:18:57.028 -08 000000069 INF: Y Motor: Unshifted Position: 3249304
17-02-28 20:18:57.058 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:18:57.058 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:18:57.058 -08 000000078 INF: ===================Camera #0 Frame #154===================
17-02-28 20:18:57.078 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.088 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:18:57.088 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:18:57.088 -08 000000052 INF: ===================Camera #2 Frame #155===================
17-02-28 20:18:57.205 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.228 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:18:57.228 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:18:57.228 -08 000000078 INF: ===================Camera #0 Frame #160===================
17-02-28 20:18:57.259 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:18:57.259 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:18:57.259 -08 000000052 INF: ===================Camera #2 Frame #162===================
17-02-28 20:18:57.341 -08 000000069 INF: Y Motor: Unshifted Position: 3045640
17-02-28 20:18:57.391 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.398 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:18:57.398 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:18:57.398 -08 000000078 INF: ===================Camera #0 Frame #167===================
17-02-28 20:18:57.433 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:18:57.433 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:18:57.433 -08 000000052 INF: ===================Camera #2 Frame #168===================
17-02-28 20:18:57.515 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.571 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:18:57.571 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:18:57.571 -08 000000078 INF: ===================Camera #0 Frame #173===================
17-02-28 20:18:57.604 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:18:57.604 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:18:57.604 -08 000000052 INF: ===================Camera #2 Frame #174===================
17-02-28 20:18:57.655 -08 000000069 INF: Y Motor: Unshifted Position: 2844144
17-02-28 20:18:57.705 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.741 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:18:57.741 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:18:57.741 -08 000000078 INF: ===================Camera #0 Frame #179===================
17-02-28 20:18:57.775 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:18:57.775 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:18:57.775 -08 000000052 INF: ===================Camera #2 Frame #181===================
17-02-28 20:18:57.829 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:57.911 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:18:57.911 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:18:57.911 -08 000000078 INF: ===================Camera #0 Frame #186===================
17-02-28 20:18:57.949 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:18:57.949 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:18:57.949 -08 000000052 INF: ===================Camera #2 Frame #187===================
17-02-28 20:18:57.965 -08 000000069 INF: Y Motor: Unshifted Position: 2639822
17-02-28 20:18:58.015 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.084 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:18:58.084 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:18:58.084 -08 000000078 INF: ===================Camera #0 Frame #192===================
17-02-28 20:18:58.120 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:18:58.120 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:18:58.120 -08 000000052 INF: ===================Camera #2 Frame #193===================
17-02-28 20:18:58.139 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.254 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:18:58.254 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:18:58.254 -08 000000078 INF: ===================Camera #0 Frame #198===================
17-02-28 20:18:58.279 -08 000000069 INF: Y Motor: Unshifted Position: 2438343
17-02-28 20:18:58.291 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:18:58.291 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:18:58.291 -08 000000052 INF: ===================Camera #2 Frame #200===================
17-02-28 20:18:58.329 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.424 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:18:58.424 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:18:58.424 -08 000000078 INF: ===================Camera #0 Frame #205===================
17-02-28 20:18:58.453 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.465 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:18:58.465 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:18:58.465 -08 000000052 INF: ===================Camera #2 Frame #206===================
17-02-28 20:18:58.589 -08 000000069 INF: Y Motor: Unshifted Position: 2234015
17-02-28 20:18:58.597 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:18:58.597 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:18:58.597 -08 000000078 INF: ===================Camera #0 Frame #211===================
17-02-28 20:18:58.635 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:18:58.635 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:18:58.635 -08 000000052 INF: ===================Camera #2 Frame #212===================
17-02-28 20:18:58.639 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.763 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.768 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:18:58.768 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:18:58.768 -08 000000078 INF: ===================Camera #0 Frame #217===================
17-02-28 20:18:58.806 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:18:58.806 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:18:58.806 -08 000000052 INF: ===================Camera #2 Frame #219===================
17-02-28 20:18:58.903 -08 000000069 INF: Y Motor: Unshifted Position: 2032301
17-02-28 20:18:58.936 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:18:58.936 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:18:58.936 -08 000000078 INF: ===================Camera #0 Frame #223===================
17-02-28 20:18:58.953 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:58.980 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:18:58.980 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:18:58.980 -08 000000052 INF: ===================Camera #2 Frame #225===================
17-02-28 20:18:59.077 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.106 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:18:59.106 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:18:59.106 -08 000000078 INF: ===================Camera #0 Frame #230===================
17-02-28 20:18:59.151 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:18:59.151 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:18:59.151 -08 000000052 INF: ===================Camera #2 Frame #231===================
17-02-28 20:18:59.215 -08 000000069 INF: Y Motor: Unshifted Position: 1828197
17-02-28 20:18:59.265 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.279 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:18:59.279 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:18:59.279 -08 000000078 INF: ===================Camera #0 Frame #236===================
17-02-28 20:18:59.322 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:18:59.322 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:18:59.322 -08 000000052 INF: ===================Camera #2 Frame #238===================
17-02-28 20:18:59.389 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.449 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:18:59.449 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:18:59.449 -08 000000078 INF: ===================Camera #0 Frame #242===================
17-02-28 20:18:59.496 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:18:59.496 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:18:59.496 -08 000000052 INF: ===================Camera #2 Frame #244===================
17-02-28 20:18:59.525 -08 000000069 INF: Y Motor: Unshifted Position: 1625401
17-02-28 20:18:59.575 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.619 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:18:59.619 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:18:59.619 -08 000000078 INF: ===================Camera #0 Frame #249===================
17-02-28 20:18:59.667 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:18:59.667 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:18:59.667 -08 000000052 INF: ===================Camera #2 Frame #250===================
17-02-28 20:18:59.699 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.792 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:18:59.792 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:18:59.792 -08 000000078 INF: ===================Camera #0 Frame #255===================
17-02-28 20:18:59.838 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:18:59.838 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:18:59.838 -08 000000052 INF: ===================Camera #2 Frame #257===================
17-02-28 20:18:59.839 -08 000000069 INF: Y Motor: Unshifted Position: 1423674
17-02-28 20:18:59.889 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:18:59.962 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:18:59.962 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:18:59.962 -08 000000078 INF: ===================Camera #0 Frame #261===================
17-02-28 20:19:00.013 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.013 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:19:00.013 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:19:00.013 -08 000000052 INF: ===================Camera #2 Frame #263===================
17-02-28 20:19:00.132 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:19:00.132 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:19:00.132 -08 000000078 INF: ===================Camera #0 Frame #267===================
17-02-28 20:19:00.148 -08 000000069 INF: Y Motor: Unshifted Position: 1219573
17-02-28 20:19:00.184 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:19:00.184 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:19:00.184 -08 000000052 INF: ===================Camera #2 Frame #269===================
17-02-28 20:19:00.198 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.273 -08 000000081 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:00.273 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:00.275 -08 000000077 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:00.276 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:00.276 -08 000000035 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:00.276 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:00.276 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:00.276 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:00.276 -08 000000035 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:00.276 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:00.276 -08 000000035 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:00.276 -08 000000035 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:00.279 -08 000000035 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:00.301 -08 000000078 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:00.301 -08 000000078 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:00.301 -08 000000078 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:00.317 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:00.318 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:00.325 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.461 -08 000000069 INF: Y Motor: Unshifted Position: 1016555
17-02-28 20:19:00.480 -08 000000078 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:00.480 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:00.480 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:00.480 -08 000000052 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:00.480 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:19:00.489 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:00.490 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:00.511 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:00.513 -08 000000078 INF: ======================================
17-02-28 20:19:00.645 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:19:00.645 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 368.9166 ms
17-02-28 20:19:00.645 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.0626 ms
17-02-28 20:19:00.645 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.1326 ms
17-02-28 20:19:00.646 -08 000000073 INF: ======================================
17-02-28 20:19:00.647 -08 000000069 INF: Y Motor: Unshifted Position: 983384
17-02-28 20:19:00.647 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:00.647 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:00.689 -08 000000052 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:00.689 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:19:00.708 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:19:00.708 -08 000000035 INF: Excitation Filter 1: Moved 107 steps in 431.3886 ms
17-02-28 20:19:00.708 -08 000000035 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 431.5266 ms
17-02-28 20:19:00.708 -08 000000035 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 431.6083 ms
17-02-28 20:19:00.708 -08 000000035 INF: ======================================
17-02-28 20:19:00.709 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:00.709 -08 000000069 INF: Y Motor: Moved to 14.8338 after 7860 ms
17-02-28 20:19:00.709 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:00.709 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:00.710 -08 000000077 INF: ======================================
17-02-28 20:19:00.723 -08 000000052 INF: ======================================
17-02-28 20:19:00.724 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:19:00.725 -08 000000101 INF: ======================================
17-02-28 20:19:00.775 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:00.775 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:00.775 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:00.834 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:00.834 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:00.834 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:00.899 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:00.961 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:01.023 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.023 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:01.023 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:01.085 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.085 -08 000000069 INF: ======================================
17-02-28 20:19:01.086 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:01.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:01.088 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.088 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:01.144 -08 000000086 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:01.144 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:01.206 -08 000000089 INF: FPGA: Recv TDIYERD 1483385
17-02-28 20:19:01.206 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:01.271 -08 000000039 INF: FPGA: Recv ZADCR 17175
17-02-28 20:19:01.271 -08 000000018 INF: At scan end Y pos = 14.834 and Z pos = -0.066. Y moved -48.539 mm
17-02-28 20:19:01.271 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:01.333 -08 000000051 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:01.333 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:01.333 -08 000000018 INF: TDIScan finished after 11781.0677 ms
17-02-28 20:19:01.333 -08 000000018 INF: Image[0]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:19:01.333 -08 000000018 INF: Image[2]: Y should trigger at 63.373 mm, 2nd row was at 64.282 mm (error = 0.909 mm)
17-02-28 20:19:01.335 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.368 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.909 um
17-02-28 20:19:01.368 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.369 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:01.395 -08 000000060 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:01.396 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.396 -08 000000035 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:01.396 -08 000000108 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:01.396 -08 000000052 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:01.396 -08 000000025 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:01.396 -08 000000052 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:01.397 -08 000000052 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:01.397 -08 000000025 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:01.397 -08 000000025 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:01.397 -08 000000108 INF: ======================================
17-02-28 20:19:01.397 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:01.397 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:01.398 -08 000000085 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:01.400 -08 000000064 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:01.425 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:01.426 -08 000000064 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:01.427 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.427 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.427 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.427 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.427 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:01.457 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:01.457 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:19:01.457 -08 000000085 INF: FPGA: Xmit ZDACW 18205\n
17-02-28 20:19:01.457 -08 000000025 INF: ======================================
17-02-28 20:19:01.459 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.459 -08 000000052 INF: ======================================
17-02-28 20:19:01.503 -08 000000082 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.504 -08 000000057 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.504 -08 000000051 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.504 -08 000000033 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:01.519 -08 000000010 INF: FPGA: Recv ZDACW 
17-02-28 20:19:01.519 -08 000000085 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:01.519 -08 000000085 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:01.581 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:19:01.581 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:01.582 -08 000000085 INF: ======================================
17-02-28 20:19:01.655 -08 000000082 INF: LFT found best fwhm score 2.023821 in 151 ms
17-02-28 20:19:01.655 -08 000000082 INF: LFT found good score at index 8577 with fwhm value 2.023821. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000057 INF: LFT found best fwhm score 2.000459 in 151 ms
17-02-28 20:19:01.655 -08 000000057 INF: LFT found good score at index 713 with fwhm value 2.000459. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000051 INF: LFT found best fwhm score 2.000367 in 151 ms
17-02-28 20:19:01.655 -08 000000033 INF: LFT found best fwhm score 2.000358 in 151 ms
17-02-28 20:19:01.655 -08 000000051 INF: LFT found good score at index 7753 with fwhm value 2.000367. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000033 INF: LFT found good score at index 697 with fwhm value 2.000358. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:01.655 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:19:01.655 -08 000000057 INF: ======================================
17-02-28 20:19:01.655 -08 000000082 INF: ======================================
17-02-28 20:19:01.656 -08 000000033 INF: ======================================
17-02-28 20:19:01.656 -08 000000051 INF: ======================================
17-02-28 20:19:01.657 -08 000000064 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:01.658 -08 000000064 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:4,B
17-02-28 20:19:01.658 -08 000000064 INF: ======================================
17-02-28 20:19:01.659 -08 000000035 INF: ======================================
17-02-28 20:19:01.660 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.661 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.662 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:19:01.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:19:01.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:01.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 13.86234 Y = 39.70494===================
17-02-28 20:19:01.664 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:01.664 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:01.687 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:01.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:01.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:01.687 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:01.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:01.688 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:01.688 -08 000000018 INF: Transformed XStagePosition from 14.97034 mm to 14.996210006997 mm.
17-02-28 20:19:01.699 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4832157393694 mm.
17-02-28 20:19:01.699 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2832157393694 mm.
17-02-28 20:19:01.700 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3739657393694 mm.
17-02-28 20:19:01.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:01.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:01.703 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -69.4 um, section = D_1
17-02-28 20:19:01.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:01.705 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:01.707 -08 000000075 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:01.728 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":4,"Tile":2101,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF228","HCSMMF212","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.747 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:01.747 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:01.747 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:19:01.748 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:01.748 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:01.748 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:01.748 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:01.755 -08 000000108 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:01.755 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:01.757 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:01.757 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:01.759 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:01.759 -08 000000082 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:01.759 -08 000000010 INF: ===================Move X Motor without settling===================
17-02-28 20:19:01.759 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:01.759 -08 000000010 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:01.760 -08 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:01.760 -08 000000066 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:01.760 -08 000000101 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:01.760 -08 000000101 INF: ======================================
17-02-28 20:19:01.760 -08 000000086 INF: ======================================
17-02-28 20:19:01.761 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:01.761 -08 000000066 INF: ======================================
17-02-28 20:19:01.762 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:01.762 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:01.762 -08 000000086 INF: Y Motor: Moving to 64.4832 mm @25.000 mm/sec, started at 14.8338 mm
17-02-28 20:19:01.763 -08 000000034 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:01.763 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:01.763 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:01.763 -08 000000101 INF: ======================================
17-02-28 20:19:01.763 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:01.763 -08 000000053 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:01.763 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:01.763 -08 000000034 INF: ======================================
17-02-28 20:19:01.763 -08 000000053 INF: ======================================
17-02-28 20:19:01.763 -08 000000077 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:01.764 -08 000000066 INF: ======================================
17-02-28 20:19:01.764 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:01.764 -08 000000077 INF: ======================================
17-02-28 20:19:01.764 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:01.765 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:19:01.765 -08 000000025 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:01.765 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:01.765 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.766 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:01.766 -08 000000089 INF: ======================================
17-02-28 20:19:01.766 -08 000000025 INF: ======================================
17-02-28 20:19:01.766 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:01.767 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:01.768 -08 000000036 INF: ======================================
17-02-28 20:19:01.768 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:01.768 -08 000000060 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:01.769 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:01.770 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":4,"Tile":2102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF260","HCSMMF188","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.770 -08 000000105 INF: ======================================
17-02-28 20:19:01.771 -08 000000075 INF: ======================================
17-02-28 20:19:01.818 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":4,"Tile":2104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF195","HCSMMF269","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.822 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":4,"Tile":2103,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF287","HCSMMF241","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.825 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":4,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF253","HCSMMF246","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.828 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":4,"Tile":2106,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF282","HCSMMF220","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.837 -08 000000073 INF: FPGA: Recv ZSEL 
17-02-28 20:19:01.839 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.839 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:01.839 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:01.839 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:01.839 -08 000000060 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:01.840 -08 000000010 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:01.840 -08 000000010 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:01.890 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":4,"Tile":2110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF276","HCSMMF263","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.891 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":4,"Tile":2107,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF285","HCSMMF189","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.893 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:19:01.893 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:01.894 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":4,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF245","HCSMMF221","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.895 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":4,"Tile":2105,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF274","HCSMMF176","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:01.895 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:01.895 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:01.895 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Moving to 14.9962 mm @15.000 mm/sec, started at 13.8950 mm
17-02-28 20:19:01.895 -08 000000010 INF: X Motor: Xmit MA -18024\n
17-02-28 20:19:01.895 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.895 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":4,"Tile":2112,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF194","HCSMMF267","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.896 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":4,"Tile":2111,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF272","HCSMMF217","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.897 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":4,"Tile":2116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF235","HCSMMF191","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.897 -08 000000060 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:01.897 -08 000000060 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:01.897 -08 000000060 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:01.897 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":4,"Tile":2117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF183","HCSMMF200","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.899 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":4,"Tile":2114,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF280","HCSMMF256","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.900 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":4,"Tile":2120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF227","HCSMMF261","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.903 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":4,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF273","HCSMMF206","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.904 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":4,"Tile":2118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF199","HCSMMF181","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.905 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":4,"Tile":2119,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF230","HCSMMF240","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.905 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":4,"Tile":2113,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF266","HCSMMF184","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.907 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":4,"Tile":2121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF225","HCSMMF249","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.908 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":4,"Tile":2123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF182","HCSMMF178","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.909 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":4,"Tile":2124,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF233","HCSMMF218","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.909 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":4,"Tile":2125,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF275","HCSMMF201","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.911 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":4,"Tile":2127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF185","HCSMMF202","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.911 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":4,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF203","HCSMMF238","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.912 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":4,"Tile":2126,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF193","HCSMMF236","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.914 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":4,"Tile":2122,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF216","HCSMMF187","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:01.917 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:01.923 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:01.955 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:01.955 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.957 -08 000000010 INF: X Motor: Recv MA -18024\r\n>
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:01.957 -08 000000010 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Set target position to 5948322 encoder counts
17-02-28 20:19:01.957 -08 000000086 INF: Y Motor: Xmit s r0xca 5948322\r
17-02-28 20:19:01.957 -08 000000060 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:01.957 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:01.959 -08 000000060 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:01.959 -08 000000060 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:01.959 -08 000000060 INF: Z Motor: Arming to move to -0.0294 mm
17-02-28 20:19:01.959 -08 000000060 INF: FPGA: Xmit ZYT 6428322 4\n
17-02-28 20:19:02.017 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.017 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:02.022 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:19:02.022 -08 000000060 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483384 enc / 14.834 mm / ) = 6428322 enc / 64.283 mm
17-02-28 20:19:02.022 -08 000000060 INF: FPGA: Xmit ZARM 7719\n
17-02-28 20:19:02.023 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:02.023 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:19:02.023 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:02.077 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.080 -08 000000105 INF: FPGA: Recv ZARM
17-02-28 20:19:02.080 -08 000000060 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.1529 ms
17-02-28 20:19:02.080 -08 000000060 INF: Z Motor: ArmAbsStepped took 120.6754 ms
17-02-28 20:19:02.080 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:02.082 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:02.082 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:02.082 -08 000000086 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:19:02.082 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.083 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:02.083 -08 000000060 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:02.084 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:02.085 -08 000000060 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:02.086 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:19:02.087 -08 000000060 INF: ======================================
17-02-28 20:19:02.179 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.185 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:02.207 -08 000000086 INF: Y Motor: Unshifted Position: 1061064
17-02-28 20:19:02.257 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.295 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.301 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:02.363 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:02.363 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:02.363 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:02.378 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:02.380 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:02.382 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.418 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:02.521 -08 000000086 INF: Y Motor: Unshifted Position: 1762547
17-02-28 20:19:02.571 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.583 -08 000000010 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:02.645 -08 000000010 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:02.645 -08 000000010 INF: X Motor: Moved to 14.9961 after 688 ms
17-02-28 20:19:02.645 -08 000000010 INF: ======================================
17-02-28 20:19:02.695 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.705 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:02.831 -08 000000086 INF: Y Motor: Unshifted Position: 2545891
17-02-28 20:19:02.881 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:02.978 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:02.978 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:02.978 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:02.993 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:02.995 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:19:02.996 -08 000000101 INF: ======================================
17-02-28 20:19:02.998 -08 000000082 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:02.999 -08 000000082 INF: ======================================
17-02-28 20:19:03.009 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.145 -08 000000086 INF: Y Motor: Unshifted Position: 3323362
17-02-28 20:19:03.195 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.321 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.459 -08 000000086 INF: Y Motor: Unshifted Position: 4104250
17-02-28 20:19:03.509 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.631 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.768 -08 000000086 INF: Y Motor: Unshifted Position: 4886680
17-02-28 20:19:03.818 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:03.945 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.081 -08 000000086 INF: Y Motor: Unshifted Position: 5666561
17-02-28 20:19:04.131 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.254 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.393 -08 000000086 INF: Y Motor: Unshifted Position: 5948324
17-02-28 20:19:04.443 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:04.579 -08 000000086 INF: Y Motor: Unshifted Position: 5948323
17-02-28 20:19:04.579 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:04.579 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:04.641 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:04.641 -08 000000086 INF: Y Motor: Moved to 64.4832 after 2559 ms
17-02-28 20:19:04.641 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:04.704 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:04.704 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:04.704 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:04.767 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:04.767 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:04.767 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:04.831 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:04.890 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:04.954 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:04.954 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:04.954 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:05.017 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.017 -08 000000086 INF: ======================================
17-02-28 20:19:05.018 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:19:05.019 -08 000000108 INF: ======================================
17-02-28 20:19:05.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:05.021 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:05.022 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:19:05.022 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:19:05.079 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.079 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:19:05.139 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:05.140 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:05.140 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:05.140 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:05.200 -08 000000035 INF: FPGA: Recv TDIYERD 6448323
17-02-28 20:19:05.200 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448323 counts (64.483 mm)
17-02-28 20:19:05.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:05.201 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:05.202 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:05.202 -08 000000050 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:05.202 -08 000000050 INF: ======================================
17-02-28 20:19:05.203 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:05.203 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:05.204 -08 000000030 INF: FPGA: Xmit TDIYPOS 6337397\n
17-02-28 20:19:05.262 -08 000000078 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:05.262 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:05.264 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:05.264 -08 000000030 INF: FPGA: Xmit TDIYARM3 139264 6428322 1 1\n
17-02-28 20:19:05.327 -08 000000069 INF: FPGA: Recv TDIYARM3
17-02-28 20:19:05.327 -08 000000030 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:05.329 -08 000000030 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:05.330 -08 000000030 INF: ======================================
17-02-28 20:19:05.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:05.332 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:05.332 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.333 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.334 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.335 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:05.335 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:05.335 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:05.335 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:05.335 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:05.335 -08 000000053 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:05.335 -08 000000053 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:05.335 -08 000000053 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:05.335 -08 000000053 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:05.336 -08 000000053 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:05.761 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:19:05.761 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:19:05.761 -08 000000053 INF: Excitation Filter 1: Moved -107 steps in 425.7857 ms
17-02-28 20:19:05.761 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 426.3552 ms
17-02-28 20:19:05.761 -08 000000053 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 425.9579 ms
17-02-28 20:19:05.761 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.511 ms
17-02-28 20:19:05.761 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.6178 ms
17-02-28 20:19:05.762 -08 000000053 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.1137 ms
17-02-28 20:19:05.762 -08 000000047 INF: ======================================
17-02-28 20:19:05.762 -08 000000053 INF: ======================================
17-02-28 20:19:05.763 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:05.765 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:05.765 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:05.765 -08 000000078 INF: ===================FPGA Z Wait===================
17-02-28 20:19:05.766 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:05.766 -08 000000078 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:05.766 -08 000000075 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:05.766 -08 000000050 INF: Y Motor: Moving to 14.8349 mm @6.500 mm/sec, started at 64.4832 mm
17-02-28 20:19:05.766 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:05.766 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:05.766 -08 000000033 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:05.767 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:05.767 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:19:05.769 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.769 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.769 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.769 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.771 -08 000000033 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:05.828 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.828 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:05.828 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:05.890 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:05.890 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:05.919 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.919 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.919 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:05.919 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Set target position to 983488 encoder counts
17-02-28 20:19:05.952 -08 000000050 INF: Y Motor: Xmit s r0xca 983488\r
17-02-28 20:19:06.014 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:06.014 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:19:06.014 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:06.069 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:06.069 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:06.069 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:06.069 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:06.078 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:06.078 -08 000000050 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:19:06.078 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.136 -08 000000073 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:06.136 -08 000000078 INF: ======================================
17-02-28 20:19:06.200 -08 000000050 INF: Y Motor: Unshifted Position: 5886683
17-02-28 20:19:06.219 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:06.219 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:06.219 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:06.219 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:06.219 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:06.219 -08 000000034 INF: ===================Camera #0 Frame #5===================
17-02-28 20:19:06.250 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.376 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.392 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:19:06.392 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:19:06.392 -08 000000034 INF: ===================Camera #0 Frame #11===================
17-02-28 20:19:06.393 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:19:06.393 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:19:06.393 -08 000000085 INF: ===================Camera #2 Frame #11===================
17-02-28 20:19:06.515 -08 000000050 INF: Y Motor: Unshifted Position: 5682369
17-02-28 20:19:06.560 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:06.560 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:06.560 -08 000000034 INF: ===================Camera #0 Frame #17===================
17-02-28 20:19:06.565 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.571 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:06.571 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:06.571 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:19:06.689 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.730 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:06.730 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:06.730 -08 000000034 INF: ===================Camera #0 Frame #23===================
17-02-28 20:19:06.745 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:19:06.745 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:19:06.745 -08 000000085 INF: ===================Camera #2 Frame #24===================
17-02-28 20:19:06.825 -08 000000050 INF: Y Motor: Unshifted Position: 5480872
17-02-28 20:19:06.875 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:06.898 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:19:06.898 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:19:06.898 -08 000000034 INF: ===================Camera #0 Frame #29===================
17-02-28 20:19:06.927 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:19:06.927 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:19:06.927 -08 000000085 INF: ===================Camera #2 Frame #31===================
17-02-28 20:19:07.003 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.076 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:19:07.076 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:19:07.076 -08 000000034 INF: ===================Camera #0 Frame #36===================
17-02-28 20:19:07.108 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:19:07.108 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:19:07.108 -08 000000085 INF: ===================Camera #2 Frame #37===================
17-02-28 20:19:07.138 -08 000000050 INF: Y Motor: Unshifted Position: 5277203
17-02-28 20:19:07.188 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.256 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:19:07.256 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:19:07.256 -08 000000034 INF: ===================Camera #0 Frame #43===================
17-02-28 20:19:07.286 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:19:07.286 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:19:07.286 -08 000000085 INF: ===================Camera #2 Frame #44===================
17-02-28 20:19:07.312 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.428 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:19:07.428 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:19:07.428 -08 000000034 INF: ===================Camera #0 Frame #49===================
17-02-28 20:19:07.451 -08 000000050 INF: Y Motor: Unshifted Position: 5071810
17-02-28 20:19:07.459 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:19:07.459 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:19:07.459 -08 000000085 INF: ===================Camera #2 Frame #50===================
17-02-28 20:19:07.501 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.606 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:19:07.606 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:19:07.606 -08 000000034 INF: ===================Camera #0 Frame #56===================
17-02-28 20:19:07.628 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.633 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:19:07.633 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:19:07.633 -08 000000085 INF: ===================Camera #2 Frame #57===================
17-02-28 20:19:07.761 -08 000000050 INF: Y Motor: Unshifted Position: 4872043
17-02-28 20:19:07.777 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:19:07.777 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:19:07.777 -08 000000034 INF: ===================Camera #0 Frame #62===================
17-02-28 20:19:07.811 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.815 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:19:07.815 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:19:07.815 -08 000000085 INF: ===================Camera #2 Frame #63===================
17-02-28 20:19:07.938 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:07.952 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:19:07.952 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:19:07.952 -08 000000034 INF: ===================Camera #0 Frame #68===================
17-02-28 20:19:07.993 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:19:07.993 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:19:07.993 -08 000000085 INF: ===================Camera #2 Frame #70===================
17-02-28 20:19:08.074 -08 000000050 INF: Y Motor: Unshifted Position: 4668591
17-02-28 20:19:08.121 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:19:08.121 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:19:08.121 -08 000000034 INF: ===================Camera #0 Frame #75===================
17-02-28 20:19:08.124 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.176 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:19:08.176 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:19:08.176 -08 000000085 INF: ===================Camera #2 Frame #77===================
17-02-28 20:19:08.248 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.293 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:19:08.293 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:19:08.293 -08 000000034 INF: ===================Camera #0 Frame #81===================
17-02-28 20:19:08.348 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:19:08.348 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:19:08.348 -08 000000085 INF: ===================Camera #2 Frame #83===================
17-02-28 20:19:08.385 -08 000000050 INF: Y Motor: Unshifted Position: 4466212
17-02-28 20:19:08.435 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.461 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:19:08.461 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:19:08.461 -08 000000034 INF: ===================Camera #0 Frame #87===================
17-02-28 20:19:08.517 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:19:08.517 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:19:08.517 -08 000000085 INF: ===================Camera #2 Frame #89===================
17-02-28 20:19:08.563 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.629 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:19:08.629 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:19:08.629 -08 000000034 INF: ===================Camera #0 Frame #93===================
17-02-28 20:19:08.686 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:19:08.686 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:19:08.686 -08 000000085 INF: ===================Camera #2 Frame #95===================
17-02-28 20:19:08.698 -08 000000050 INF: Y Motor: Unshifted Position: 4261462
17-02-28 20:19:08.748 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.797 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:19:08.797 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:19:08.797 -08 000000034 INF: ===================Camera #0 Frame #99===================
17-02-28 20:19:08.855 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:19:08.855 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:19:08.855 -08 000000085 INF: ===================Camera #2 Frame #102===================
17-02-28 20:19:08.872 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:08.965 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:19:08.965 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:19:08.965 -08 000000034 INF: ===================Camera #0 Frame #106===================
17-02-28 20:19:09.011 -08 000000050 INF: Y Motor: Unshifted Position: 4057790
17-02-28 20:19:09.027 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:19:09.027 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:19:09.027 -08 000000085 INF: ===================Camera #2 Frame #108===================
17-02-28 20:19:09.061 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.137 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:19:09.137 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:19:09.137 -08 000000034 INF: ===================Camera #0 Frame #112===================
17-02-28 20:19:09.186 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.197 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:19:09.197 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:19:09.197 -08 000000085 INF: ===================Camera #2 Frame #114===================
17-02-28 20:19:09.306 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:19:09.306 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:19:09.306 -08 000000034 INF: ===================Camera #0 Frame #118===================
17-02-28 20:19:09.321 -08 000000050 INF: Y Motor: Unshifted Position: 3857589
17-02-28 20:19:09.366 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:19:09.366 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:19:09.366 -08 000000085 INF: ===================Camera #2 Frame #120===================
17-02-28 20:19:09.371 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.474 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:19:09.474 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:19:09.474 -08 000000034 INF: ===================Camera #0 Frame #124===================
17-02-28 20:19:09.498 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.535 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:19:09.535 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:19:09.535 -08 000000085 INF: ===================Camera #2 Frame #127===================
17-02-28 20:19:09.634 -08 000000050 INF: Y Motor: Unshifted Position: 3653274
17-02-28 20:19:09.642 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:19:09.642 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:19:09.642 -08 000000034 INF: ===================Camera #0 Frame #131===================
17-02-28 20:19:09.684 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.707 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:19:09.707 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:19:09.707 -08 000000085 INF: ===================Camera #2 Frame #133===================
17-02-28 20:19:09.808 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:09.813 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:19:09.813 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:19:09.813 -08 000000034 INF: ===================Camera #0 Frame #137===================
17-02-28 20:19:09.876 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:19:09.876 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:19:09.876 -08 000000085 INF: ===================Camera #2 Frame #139===================
17-02-28 20:19:09.947 -08 000000050 INF: Y Motor: Unshifted Position: 3450251
17-02-28 20:19:09.981 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:19:09.981 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:19:09.981 -08 000000034 INF: ===================Camera #0 Frame #143===================
17-02-28 20:19:09.997 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.045 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:19:10.045 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:19:10.045 -08 000000085 INF: ===================Camera #2 Frame #145===================
17-02-28 20:19:10.121 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.149 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:19:10.149 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:19:10.149 -08 000000034 INF: ===================Camera #0 Frame #149===================
17-02-28 20:19:10.214 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:19:10.214 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:19:10.214 -08 000000085 INF: ===================Camera #2 Frame #152===================
17-02-28 20:19:10.257 -08 000000050 INF: Y Motor: Unshifted Position: 3248758
17-02-28 20:19:10.307 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.317 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:19:10.317 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:19:10.317 -08 000000034 INF: ===================Camera #0 Frame #155===================
17-02-28 20:19:10.386 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:19:10.386 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:19:10.386 -08 000000085 INF: ===================Camera #2 Frame #158===================
17-02-28 20:19:10.432 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.485 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:19:10.485 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:19:10.485 -08 000000034 INF: ===================Camera #0 Frame #162===================
17-02-28 20:19:10.555 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:19:10.555 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:19:10.555 -08 000000085 INF: ===================Camera #2 Frame #164===================
17-02-28 20:19:10.571 -08 000000050 INF: Y Motor: Unshifted Position: 3044664
17-02-28 20:19:10.621 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.656 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:19:10.656 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:19:10.656 -08 000000034 INF: ===================Camera #0 Frame #168===================
17-02-28 20:19:10.724 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:19:10.724 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:19:10.724 -08 000000085 INF: ===================Camera #2 Frame #170===================
17-02-28 20:19:10.745 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.824 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:19:10.824 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:19:10.824 -08 000000034 INF: ===================Camera #0 Frame #174===================
17-02-28 20:19:10.881 -08 000000050 INF: Y Motor: Unshifted Position: 2842950
17-02-28 20:19:10.893 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:19:10.893 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:19:10.893 -08 000000085 INF: ===================Camera #2 Frame #177===================
17-02-28 20:19:10.931 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:10.992 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:19:10.992 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:19:10.992 -08 000000034 INF: ===================Camera #0 Frame #180===================
17-02-28 20:19:11.058 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.065 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:19:11.065 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:19:11.065 -08 000000085 INF: ===================Camera #2 Frame #183===================
17-02-28 20:19:11.160 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:19:11.160 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:19:11.160 -08 000000034 INF: ===================Camera #0 Frame #186===================
17-02-28 20:19:11.194 -08 000000050 INF: Y Motor: Unshifted Position: 2639281
17-02-28 20:19:11.234 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:19:11.234 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:19:11.234 -08 000000085 INF: ===================Camera #2 Frame #189===================
17-02-28 20:19:11.244 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.328 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:19:11.328 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:19:11.328 -08 000000034 INF: ===================Camera #0 Frame #193===================
17-02-28 20:19:11.368 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.403 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:19:11.403 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:19:11.403 -08 000000085 INF: ===================Camera #2 Frame #195===================
17-02-28 20:19:11.499 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:19:11.499 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:19:11.499 -08 000000034 INF: ===================Camera #0 Frame #199===================
17-02-28 20:19:11.507 -08 000000050 INF: Y Motor: Unshifted Position: 2435843
17-02-28 20:19:11.557 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.572 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:19:11.572 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:19:11.572 -08 000000085 INF: ===================Camera #2 Frame #202===================
17-02-28 20:19:11.667 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:19:11.667 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:19:11.667 -08 000000034 INF: ===================Camera #0 Frame #205===================
17-02-28 20:19:11.681 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.744 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:19:11.744 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:19:11.744 -08 000000085 INF: ===================Camera #2 Frame #208===================
17-02-28 20:19:11.817 -08 000000050 INF: Y Motor: Unshifted Position: 2234120
17-02-28 20:19:11.835 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:19:11.835 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:19:11.835 -08 000000034 INF: ===================Camera #0 Frame #211===================
17-02-28 20:19:11.867 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:11.913 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:19:11.913 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:19:11.913 -08 000000085 INF: ===================Camera #2 Frame #214===================
17-02-28 20:19:11.994 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.003 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:19:12.003 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:19:12.003 -08 000000034 INF: ===================Camera #0 Frame #217===================
17-02-28 20:19:12.082 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:19:12.082 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:19:12.082 -08 000000085 INF: ===================Camera #2 Frame #220===================
17-02-28 20:19:12.130 -08 000000050 INF: Y Motor: Unshifted Position: 2030667
17-02-28 20:19:12.173 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:19:12.173 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:19:12.173 -08 000000034 INF: ===================Camera #0 Frame #224===================
17-02-28 20:19:12.180 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.251 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:19:12.251 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:19:12.251 -08 000000085 INF: ===================Camera #2 Frame #227===================
17-02-28 20:19:12.304 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.346 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:19:12.346 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:19:12.346 -08 000000034 INF: ===================Camera #0 Frame #230===================
17-02-28 20:19:12.423 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:19:12.423 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:19:12.423 -08 000000085 INF: ===================Camera #2 Frame #233===================
17-02-28 20:19:12.441 -08 000000050 INF: Y Motor: Unshifted Position: 1828302
17-02-28 20:19:12.491 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.516 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:19:12.516 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:19:12.516 -08 000000034 INF: ===================Camera #0 Frame #236===================
17-02-28 20:19:12.592 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:19:12.592 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:19:12.592 -08 000000085 INF: ===================Camera #2 Frame #239===================
17-02-28 20:19:12.620 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.686 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:19:12.686 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:19:12.686 -08 000000034 INF: ===================Camera #0 Frame #243===================
17-02-28 20:19:12.754 -08 000000050 INF: Y Motor: Unshifted Position: 1624851
17-02-28 20:19:12.761 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:19:12.761 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:19:12.761 -08 000000085 INF: ===================Camera #2 Frame #245===================
17-02-28 20:19:12.804 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.860 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:19:12.860 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:19:12.860 -08 000000034 INF: ===================Camera #0 Frame #249===================
17-02-28 20:19:12.929 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:12.930 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:19:12.930 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:19:12.930 -08 000000085 INF: ===================Camera #2 Frame #252===================
17-02-28 20:19:13.030 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:19:13.030 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:19:13.030 -08 000000034 INF: ===================Camera #0 Frame #255===================
17-02-28 20:19:13.067 -08 000000050 INF: Y Motor: Unshifted Position: 1423131
17-02-28 20:19:13.102 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:19:13.102 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:19:13.102 -08 000000085 INF: ===================Camera #2 Frame #258===================
17-02-28 20:19:13.117 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.200 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:19:13.200 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:19:13.200 -08 000000034 INF: ===================Camera #0 Frame #262===================
17-02-28 20:19:13.241 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.273 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:19:13.273 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:19:13.273 -08 000000085 INF: ===================Camera #2 Frame #264===================
17-02-28 20:19:13.374 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:19:13.374 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:19:13.374 -08 000000034 INF: ===================Camera #0 Frame #268===================
17-02-28 20:19:13.379 -08 000000050 INF: Y Motor: Unshifted Position: 1220328
17-02-28 20:19:13.429 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.444 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:19:13.444 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:19:13.444 -08 000000085 INF: ===================Camera #2 Frame #270===================
17-02-28 20:19:13.501 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:13.501 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:13.503 -08 000000033 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:13.504 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:13.504 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:13.504 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:13.504 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:13.504 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:13.504 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:13.504 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:13.504 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:13.504 -08 000000072 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:13.505 -08 000000072 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:13.543 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:13.543 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:13.543 -08 000000034 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:13.553 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.556 -08 000000034 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:13.557 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:13.689 -08 000000050 INF: Y Motor: Unshifted Position: 1016658
17-02-28 20:19:13.690 -08 000000034 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:13.690 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:13.690 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:13.690 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:13.690 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:19:13.696 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:13.697 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:13.720 -08 000000034 INF: ======================================
17-02-28 20:19:13.739 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:13.864 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:13.864 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:13.876 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:19:13.876 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:19:13.876 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 372.0812 ms
17-02-28 20:19:13.876 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2138 ms
17-02-28 20:19:13.876 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2853 ms
17-02-28 20:19:13.876 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 372.283 ms
17-02-28 20:19:13.876 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.4856 ms
17-02-28 20:19:13.876 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5955 ms
17-02-28 20:19:13.876 -08 000000072 INF: ======================================
17-02-28 20:19:13.877 -08 000000060 INF: ======================================
17-02-28 20:19:13.878 -08 000000050 INF: Y Motor: Unshifted Position: 983487
17-02-28 20:19:13.878 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:13.878 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:13.878 -08 000000033 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:13.879 -08 000000033 INF: ======================================
17-02-28 20:19:13.899 -08 000000085 INF: ======================================
17-02-28 20:19:13.900 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:13.901 -08 000000075 INF: ======================================
17-02-28 20:19:13.941 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:13.941 -08 000000050 INF: Y Motor: Moved to 14.8349 after 7862 ms
17-02-28 20:19:13.941 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:14.002 -08 000000050 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:14.002 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:14.002 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:14.066 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:14.066 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:14.066 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:14.126 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:14.189 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:14.250 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:14.250 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:14.250 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:14.315 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:19:14.315 -08 000000050 INF: ======================================
17-02-28 20:19:14.316 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:14.317 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:14.318 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.318 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:14.373 -08 000000072 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:14.373 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:14.438 -08 000000081 INF: FPGA: Recv TDIYERD 1483489
17-02-28 20:19:14.438 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:14.500 -08 000000035 INF: FPGA: Recv ZADCR 17386
17-02-28 20:19:14.500 -08 000000018 INF: At scan end Y pos = 14.835 and Z pos = -0.067. Y moved -48.539 mm
17-02-28 20:19:14.500 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:14.562 -08 000000025 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:14.562 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:14.562 -08 000000018 INF: TDIScan finished after 12873.8027 ms
17-02-28 20:19:14.562 -08 000000018 INF: Image[0]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:19:14.562 -08 000000018 INF: Image[2]: Y should trigger at 63.374 mm, 2nd row was at 64.283 mm (error = 0.909 mm)
17-02-28 20:19:14.564 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.599 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.852 um
17-02-28 20:19:14.599 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.600 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:14.624 -08 000000072 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:14.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.625 -08 000000090 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:14.625 -08 000000052 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:14.625 -08 000000108 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:14.625 -08 000000050 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:14.625 -08 000000108 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:14.625 -08 000000108 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:14.625 -08 000000050 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:14.625 -08 000000050 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:14.626 -08 000000052 INF: ======================================
17-02-28 20:19:14.626 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:14.626 -08 000000047 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:14.627 -08 000000047 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:14.629 -08 000000030 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:14.654 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:14.655 -08 000000030 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:14.656 -08 000000036 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.656 -08 000000036 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.656 -08 000000025 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.657 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.657 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:14.686 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:14.686 -08 000000081 INF: FPGA: Recv ZSEL 
17-02-28 20:19:14.686 -08 000000047 INF: FPGA: Xmit ZDACW 18205\n
17-02-28 20:19:14.686 -08 000000050 INF: ======================================
17-02-28 20:19:14.689 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:19:14.689 -08 000000108 INF: ======================================
17-02-28 20:19:14.731 -08 000000036 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.731 -08 000000025 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.731 -08 000000057 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.731 -08 000000038 INF: FC:A, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:14.748 -08 000000058 INF: FPGA: Recv ZDACW 
17-02-28 20:19:14.749 -08 000000047 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:14.749 -08 000000047 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:14.810 -08 000000010 INF: FPGA: Recv TDIBB
17-02-28 20:19:14.810 -08 000000047 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:14.811 -08 000000047 INF: ======================================
17-02-28 20:19:14.882 -08 000000025 INF: LFT found best fwhm score 2.000293 in 151 ms
17-02-28 20:19:14.882 -08 000000025 INF: LFT found good score at index 433 with fwhm value 2.000293. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:4,B
17-02-28 20:19:14.882 -08 000000036 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:19:14.882 -08 000000036 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.049088946378686 in the next cycle, cycle 4 FC:A, C:3,L:4,B
17-02-28 20:19:14.882 -08 000000025 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.882 -08 000000036 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.882 -08 000000057 INF: LFT found best fwhm score 2.000069 in 151 ms
17-02-28 20:19:14.882 -08 000000057 INF: LFT found good score at index 7373 with fwhm value 2.000069. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:14.882 -08 000000025 INF: ======================================
17-02-28 20:19:14.882 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.883 -08 000000036 INF: ======================================
17-02-28 20:19:14.883 -08 000000038 INF: LFT found best fwhm score 2.000072 in 152 ms
17-02-28 20:19:14.883 -08 000000057 INF: ======================================
17-02-28 20:19:14.883 -08 000000038 INF: LFT found good score at index 3657 with fwhm value 2.000072. Next cycle, cycle 4 starting Z position for bottom surface is at -0.049 mm FC:A, C:3,L:4,B
17-02-28 20:19:14.883 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:19:14.883 -08 000000038 INF: ======================================
17-02-28 20:19:14.884 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:14.885 -08 000000030 INF: LFT weighted average best Z for bottom surface is at -0.049mm FC:A, C:3,L:4,B
17-02-28 20:19:14.885 -08 000000030 INF: ======================================
17-02-28 20:19:14.886 -08 000000090 INF: ======================================
17-02-28 20:19:14.887 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:14.888 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:14.889 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 14.97034 Y = 39.70494===================
17-02-28 20:19:14.890 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:14.891 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:14.914 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:14.914 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:14.914 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:14.914 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:14.914 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:14.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:19:14.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:19:14.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:14.937 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:14.937 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:14.937 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:14.968 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":4,"Tile":2204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF221","HCSMMF277","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.004 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.005 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.005 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:15.005 -08 000000018 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:15.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.006 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.009 -08 000000045 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:15.010 -08 000000045 INF: ======================================
17-02-28 20:19:15.011 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:15.011 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:15.012 -08 000000058 INF: ======================================
17-02-28 20:19:15.012 -08 000000087 INF: ======================================
17-02-28 20:19:15.013 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.014 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:15.024 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:19:15.125 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:19:15.126 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:15.126 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:15.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.132 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":4,"Tile":2209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF184","HCSMMF189","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.134 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:19:15.135 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":4,"Tile":2201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF187","HCSMMF229","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.135 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:19:15.135 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:19:15.137 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":4,"Tile":2202,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF203","HCSMMF236","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.140 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":4,"Tile":2208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF239","HCSMMF282","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.142 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":4,"Tile":2206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF263","HCSMMF207","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.144 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":4,"Tile":2217,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF235","HCSMMF230","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.146 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":4,"Tile":2207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF285","HCSMMF281","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.149 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":4,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF255","HCSMMF208","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.151 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":4,"Tile":2211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF220","HCSMMF260","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.152 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":4,"Tile":2214,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF176","HCSMMF251","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.153 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":4,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF223","HCSMMF197","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.154 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":4,"Tile":2213,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF262","HCSMMF272","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.156 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":4,"Tile":2219,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF199","HCSMMF271","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.186 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:15.187 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.187 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:15.187 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0694 mm
17-02-28 20:19:15.187 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:15.200 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":4,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF185","HCSMMF266","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.202 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":4,"Tile":2210,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF248","HCSMMF242","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.202 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":4,"Tile":2216,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF186","HCSMMF233","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.203 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":4,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF238","HCSMMF244","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.204 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":4,"Tile":2218,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF215","HCSMMF210","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.205 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":4,"Tile":2227,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF178","HCSMMF200","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.206 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":4,"Tile":2220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF243","HCSMMF275","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.206 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":4,"Tile":2221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF227","HCSMMF261","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.207 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":4,"Tile":2225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF246","HCSMMF257","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.208 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":4,"Tile":2226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF182","HCSMMF234","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.209 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":4,"Tile":2224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF267","HCSMMF180","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.210 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":4,"Tile":2222,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF250","HCSMMF252","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.212 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":4,"Tile":2223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF265","HCSMMF228","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.215 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":4,"Tile":2228,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF237","HCSMMF194","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:15.231 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.237 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:15.248 -08 000000105 INF: FPGA: Recv ZTRG 
17-02-28 20:19:15.248 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:15.311 -08 000000066 INF: FPGA: Recv ZYT 
17-02-28 20:19:15.311 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:15.311 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:19:15.332 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.332 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:15.369 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.374 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:15.374 -08 000000034 INF: FPGA: Recv ZMV 
17-02-28 20:19:15.374 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:15.374 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 63.0871 ms
17-02-28 20:19:15.374 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:15.375 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:15.436 -08 000000035 INF: FPGA: Recv ZDACR 60292
17-02-28 20:19:15.436 -08 000000018 INF: Z Motor: MoveAndTrigger took 249.0701 ms w/comms
17-02-28 20:19:15.436 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:15.436 -08 000000018 INF: Z Motor: MoveAbsStepped took 249.2396 ms
17-02-28 20:19:15.437 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.437 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.446 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:19:15.446 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:19:15.467 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.472 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:15.498 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:15.518 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:15.518 -08 000000018 INF: Transformed XStagePosition from 17.19893 mm to 17.1989307403564 mm.
17-02-28 20:19:15.526 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:15.526 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.526 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:15.529 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:19:15.529 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:15.530 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:15.531 -08 000000010 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:15.531 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:19:15.532 -08 000000085 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:15.532 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:15.532 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:15.532 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:15.532 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:15.532 -08 000000035 INF: ===================Move X Motor without settling===================
17-02-28 20:19:15.533 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000035 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:15.533 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:15.533 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:15.533 -08 000000086 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8349 mm
17-02-28 20:19:15.534 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:15.534 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:15.534 -08 000000053 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000050 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:15.534 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:15.534 -08 000000077 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:15.534 -08 000000064 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000072 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000025 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:15.534 -08 000000081 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:15.534 -08 000000053 INF: ======================================
17-02-28 20:19:15.534 -08 000000064 INF: ======================================
17-02-28 20:19:15.535 -08 000000081 INF: ======================================
17-02-28 20:19:15.535 -08 000000050 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:15.535 -08 000000109 INF: ======================================
17-02-28 20:19:15.535 -08 000000050 INF: ======================================
17-02-28 20:19:15.535 -08 000000025 INF: ======================================
17-02-28 20:19:15.536 -08 000000045 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:15.537 -08 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:15.537 -08 000000077 INF: ======================================
17-02-28 20:19:15.537 -08 000000072 INF: ======================================
17-02-28 20:19:15.538 -08 000000045 INF: ======================================
17-02-28 20:19:15.538 -08 000000066 INF: ======================================
17-02-28 20:19:15.539 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:15.539 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:15.540 -08 000000036 INF: ======================================
17-02-28 20:19:15.540 -08 000000052 INF: ======================================
17-02-28 20:19:15.541 -08 000000010 INF: ======================================
17-02-28 20:19:15.563 -08 000000035 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:15.563 -08 000000035 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:15.580 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.586 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:15.624 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.624 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:15.624 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Moving to 17.1989 mm @15.000 mm/sec, started at 14.9961 mm
17-02-28 20:19:15.624 -08 000000035 INF: X Motor: Xmit MA -17122\n
17-02-28 20:19:15.686 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.686 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:15.687 -08 000000035 INF: X Motor: Recv MA -17122\r\n>
17-02-28 20:19:15.687 -08 000000035 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:19:15.694 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:19:15.748 -08 000000086 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:19:15.810 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.810 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:19:15.810 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:15.876 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:15.876 -08 000000086 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:19:15.876 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.000 -08 000000086 INF: Y Motor: Unshifted Position: 1069760
17-02-28 20:19:16.013 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:16.050 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.174 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.313 -08 000000035 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:16.313 -08 000000086 INF: Y Motor: Unshifted Position: 1772657
17-02-28 20:19:16.363 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.375 -08 000000035 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:16.375 -08 000000035 INF: X Motor: Moved to 17.1982 after 687 ms
17-02-28 20:19:16.375 -08 000000035 INF: ======================================
17-02-28 20:19:16.487 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.623 -08 000000086 INF: Y Motor: Unshifted Position: 2555170
17-02-28 20:19:16.673 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.798 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:16.934 -08 000000086 INF: Y Motor: Unshifted Position: 3333455
17-02-28 20:19:16.984 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.111 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.247 -08 000000086 INF: Y Motor: Unshifted Position: 4119354
17-02-28 20:19:17.297 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.422 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.558 -08 000000086 INF: Y Motor: Unshifted Position: 4894291
17-02-28 20:19:17.608 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.735 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:17.871 -08 000000086 INF: Y Motor: Unshifted Position: 5675948
17-02-28 20:19:17.921 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:18.045 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:18.182 -08 000000086 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:19:18.182 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:18.182 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:18.247 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:18.247 -08 000000086 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:19:18.247 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:18.307 -08 000000086 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:18.307 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:18.307 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:18.375 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:18.375 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:18.375 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:18.434 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:18.496 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:18.558 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:18.558 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:18.558 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:18.623 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:19:18.623 -08 000000086 INF: ======================================
17-02-28 20:19:18.625 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:19:18.626 -08 000000085 INF: ======================================
17-02-28 20:19:18.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:18.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:18.628 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:19:18.628 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:19:18.682 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:18.682 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:19:18.744 -08 000000045 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:18.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:18.745 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:18.745 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:18.804 -08 000000082 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:19:18.804 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:19:18.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:18.805 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:18.806 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.806 -08 000000072 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:18.807 -08 000000057 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:18.807 -08 000000072 INF: ======================================
17-02-28 20:19:18.807 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.808 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:18.809 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:18.809 -08 000000057 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:19:18.869 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:18.869 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:18.871 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:18.871 -08 000000057 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:19:18.936 -08 000000053 INF: FPGA: Recv TDIYARM2
17-02-28 20:19:18.936 -08 000000057 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:18.937 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.939 -08 000000057 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:18.939 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:18.941 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:18.941 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:18.942 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:19.311 -08 000000057 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:19.311 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:19.311 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:19.326 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:19.328 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:19.708 -08 000000057 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53955465288 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:19.708 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:19.708 -08 000000057 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:19.723 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:19.725 -08 000000057 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:19.726 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:19.727 -08 000000057 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:19.728 -08 000000057 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:19.728 -08 000000057 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:19.730 -08 000000057 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:19.730 -08 000000057 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:19.730 -08 000000057 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:19:19.730 -08 000000057 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:19:19.805 -08 000000025 INF: FPGA: Recv ZYT 
17-02-28 20:19:19.805 -08 000000057 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:19:19.805 -08 000000057 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:19:19.867 -08 000000108 INF: FPGA: Recv ZARM
17-02-28 20:19:19.867 -08 000000057 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9884 ms
17-02-28 20:19:19.867 -08 000000057 INF: Z Motor: ArmAbsStepped took 136.9111 ms
17-02-28 20:19:19.868 -08 000000057 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:19.869 -08 000000057 INF: ===================TDI Scan Setup===================
17-02-28 20:19:19.870 -08 000000057 INF: ======================================
17-02-28 20:19:19.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:19.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:19.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:19.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:19.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:19.874 -08 000000010 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:19.874 -08 000000087 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:19.874 -08 000000010 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:19.874 -08 000000010 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:19.874 -08 000000010 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:19.874 -08 000000087 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:19.874 -08 000000010 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:19.874 -08 000000087 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:19.874 -08 000000087 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:19.875 -08 000000087 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:20.244 -08 000000045 INF: FPGA: Recv EX2MV
17-02-28 20:19:20.244 -08 000000045 INF: FPGA: Recv EX1MV
17-02-28 20:19:20.244 -08 000000087 INF: Excitation Filter 1: Moved -107 steps in 369.569 ms
17-02-28 20:19:20.244 -08 000000010 INF: Excitation Filter 2: Moved -107 steps in 369.7096 ms
17-02-28 20:19:20.244 -08 000000087 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.7397 ms
17-02-28 20:19:20.244 -08 000000087 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.9822 ms
17-02-28 20:19:20.244 -08 000000010 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.9955 ms
17-02-28 20:19:20.244 -08 000000010 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.2274 ms
17-02-28 20:19:20.245 -08 000000087 INF: ======================================
17-02-28 20:19:20.245 -08 000000010 INF: ======================================
17-02-28 20:19:20.247 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:20.248 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:20.249 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:20.249 -08 000000038 INF: ===================Serial===================
17-02-28 20:19:20.249 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:20.249 -08 000000078 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:20.250 -08 000000085 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:20.250 -08 000000078 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:19:20.250 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:20.250 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:20.250 -08 000000038 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:19:20.251 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:20.251 -08 000000039 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:20.251 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:19:20.251 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:19:20.252 -08 000000039 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:20.252 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.252 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.254 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.254 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.304 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.304 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:20.304 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:20.366 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.366 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:20.403 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.403 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.404 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.404 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:19:20.433 -08 000000078 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:19:20.493 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.493 -08 000000078 INF: Y Motor: Start the move command
17-02-28 20:19:20.493 -08 000000078 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:20.553 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.553 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.554 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.554 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.555 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:20.555 -08 000000078 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:19:20.555 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:20.679 -08 000000078 INF: Y Motor: Unshifted Position: 5929081
17-02-28 20:19:20.703 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.703 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.704 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:20.704 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:20.729 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:20.853 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:20.853 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:20.853 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:20.853 -08 000000086 INF: ===================Camera #2 Frame #1===================
17-02-28 20:19:20.854 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:20.854 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:20.854 -08 000000047 INF: ===================Camera #0 Frame #1===================
17-02-28 20:19:20.992 -08 000000078 INF: Y Motor: Unshifted Position: 5882079
17-02-28 20:19:21.009 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:21.009 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:21.009 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:21.009 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:21.009 -08 000000086 INF: ===================Camera #2 Frame #3===================
17-02-28 20:19:21.009 -08 000000047 INF: ===================Camera #0 Frame #3===================
17-02-28 20:19:21.042 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.166 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.168 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:21.168 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:21.168 -08 000000047 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:21.169 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:21.169 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:21.169 -08 000000086 INF: ===================Camera #2 Frame #4===================
17-02-28 20:19:21.302 -08 000000078 INF: Y Motor: Unshifted Position: 5835575
17-02-28 20:19:21.322 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:21.322 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:21.322 -08 000000047 INF: ===================Camera #0 Frame #5===================
17-02-28 20:19:21.322 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:21.322 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:21.323 -08 000000086 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:21.352 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.365 -08 000000051 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:21.365 -08 000000038 INF: ===================Serial===================
17-02-28 20:19:21.367 -08 000000038 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:19:21.368 -08 000000038 INF: ===================Serial===================
17-02-28 20:19:21.369 -08 000000038 INF: ======================================
17-02-28 20:19:21.426 -08 000000075 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:21.427 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:21.428 -08 000000039 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:21.429 -08 000000051 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:21.429 -08 000000109 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:21.429 -08 000000051 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:21.429 -08 000000051 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:21.429 -08 000000109 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:21.430 -08 000000051 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:21.430 -08 000000109 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:21.430 -08 000000109 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:21.430 -08 000000051 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:21.431 -08 000000109 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:21.475 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:21.475 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:21.475 -08 000000047 INF: ===================Camera #0 Frame #6===================
17-02-28 20:19:21.476 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:21.476 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:21.476 -08 000000086 INF: ===================Camera #2 Frame #6===================
17-02-28 20:19:21.478 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.478 -08 000000047 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:21.479 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:21.481 -08 000000086 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:21.482 -08 000000086 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:21.506 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:21.506 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:19:21.507 -08 000000047 INF: ======================================
17-02-28 20:19:21.532 -08 000000086 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:21.532 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:19:21.533 -08 000000086 INF: ======================================
17-02-28 20:19:21.535 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:21.536 -08 000000085 INF: ======================================
17-02-28 20:19:21.614 -08 000000078 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:19:21.664 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:21.801 -08 000000075 INF: FPGA: Recv EX1MV
17-02-28 20:19:21.801 -08 000000075 INF: FPGA: Recv EX2MV
17-02-28 20:19:21.801 -08 000000109 INF: Excitation Filter 2: Moved 107 steps in 371.3767 ms
17-02-28 20:19:21.801 -08 000000109 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.596 ms
17-02-28 20:19:21.801 -08 000000109 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.6725 ms
17-02-28 20:19:21.801 -08 000000051 INF: Excitation Filter 1: Moved 107 steps in 371.5177 ms
17-02-28 20:19:21.801 -08 000000051 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9341 ms
17-02-28 20:19:21.801 -08 000000051 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1176 ms
17-02-28 20:19:21.802 -08 000000109 INF: ======================================
17-02-28 20:19:21.802 -08 000000051 INF: ======================================
17-02-28 20:19:21.803 -08 000000078 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:19:21.803 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:21.803 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:21.803 -08 000000039 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:21.804 -08 000000039 INF: ======================================
17-02-28 20:19:21.865 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:21.865 -08 000000078 INF: Y Motor: Moved to 62.9074 after 1310 ms
17-02-28 20:19:21.865 -08 000000078 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:21.927 -08 000000078 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:21.927 -08 000000078 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:21.927 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:21.989 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:21.989 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:21.989 -08 000000078 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:22.051 -08 000000078 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:22.113 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:22.178 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:22.178 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:22.178 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:22.241 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:19:22.241 -08 000000078 INF: ======================================
17-02-28 20:19:22.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:22.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:22.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.244 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:22.300 -08 000000085 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:22.300 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:22.362 -08 000000073 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:19:22.362 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:22.424 -08 000000039 INF: FPGA: Recv ZADCR 2426
17-02-28 20:19:22.424 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:19:22.424 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:22.486 -08 000000073 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:19:22.486 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:19:22.486 -08 000000018 INF: TDIScan finished after 6967.3449 ms
17-02-28 20:19:22.486 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:22.486 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:22.487 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:22.548 -08 000000039 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:22.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.550 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.550 -08 000000060 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:22.551 -08 000000045 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:22.551 -08 000000045 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:22.551 -08 000000045 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:22.551 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:22.551 -08 000000060 INF: ======================================
17-02-28 20:19:22.552 -08 000000047 INF: ======================================
17-02-28 20:19:22.617 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:22.617 -08 000000045 INF: ======================================
17-02-28 20:19:22.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:22.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.659 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:22.697 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.698 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:22.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.733 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:22.765 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:22.766 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:22.766 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:22.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:19:22.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:22.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:19:22.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:19:23.404 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:19:23.427 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0507554057137063Best Z position at top surface = -0.121601308017947Best Z position at top surface + compensator offset = -0.0989013080179472 C:3,L:5,B
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.121601308017947
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.72905
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0507554057137063
17-02-28 20:19:23.428 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.38784
17-02-28 20:19:23.428 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0507554057137063.
17-02-28 20:19:23.429 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:23.562 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:23.562 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:23.611 -08 000000052 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:23.611 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:19:23.613 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.613 -08 000000018 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:23.613 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.614 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.615 -08 000000010 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:23.615 -08 000000060 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:23.615 -08 000000051 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:23.615 -08 000000010 INF: ======================================
17-02-28 20:19:23.615 -08 000000060 INF: ======================================
17-02-28 20:19:23.615 -08 000000051 INF: ======================================
17-02-28 20:19:23.616 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.617 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.618 -08 000000018 INF: ETF Best Z: -0.0507554 mm (13305 DAC)
17-02-28 20:19:23.618 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.619 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:23.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:23.626 -08 000000018 INF: Swath 1 position calculated to be: {X=16.62733, Y=39.70494} from estimated center X= 17.122, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:23.626 -08 000000018 INF: Swath 2 position calculated to be: {X=17.73533, Y=39.70494} from estimated center X= 17.122, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:24.082 -08 000000018 INF: Swath 0: Converted transform from (86.65143, -28.18295) pixels to (0.030015, -0.00966) mm.
17-02-28 20:19:24.087 -08 000000018 INF: Swath 1: Converted transform from (70.31225, -23.32251) pixels to (0.02415, -0.007935) mm.
17-02-28 20:19:24.088 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:24.089 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:24.089 -08 000000018 INF: Transformed XStagePosition from 16.62733 mm to 16.6573495939374 mm.
17-02-28 20:19:24.101 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4852857397646 mm.
17-02-28 20:19:24.101 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2852857397646 mm.
17-02-28 20:19:24.101 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3760357397646 mm.
17-02-28 20:19:24.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:24.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:24.103 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:24.103 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:19:24.110 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:24.110 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:24.111 -08 000000058 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:24.111 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:19:24.111 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:24.112 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:24.112 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:24.112 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:24.112 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:24.112 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:24.112 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:24.112 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:24.113 -08 000000052 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:24.113 -08 000000052 INF: Z Motor: Moving to -0.0708 mm, started at -0.0100 mm
17-02-28 20:19:24.113 -08 000000052 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:24.113 -08 000000109 INF: ===================Move X Motor without settling===================
17-02-28 20:19:24.113 -08 000000109 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:24.113 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:24.113 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:24.114 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:24.114 -08 000000069 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:24.114 -08 000000087 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:24.114 -08 000000066 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:24.114 -08 000000108 INF: ======================================
17-02-28 20:19:24.114 -08 000000086 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:24.114 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:24.114 -08 000000036 INF: ======================================
17-02-28 20:19:24.114 -08 000000086 INF: ======================================
17-02-28 20:19:24.114 -08 000000030 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:24.114 -08 000000030 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:24.115 -08 000000066 INF: ======================================
17-02-28 20:19:24.115 -08 000000101 INF: Y Motor: Moving to 64.4853 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:19:24.115 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:24.115 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:24.115 -08 000000030 INF: ======================================
17-02-28 20:19:24.115 -08 000000078 INF: ======================================
17-02-28 20:19:24.116 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:24.116 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:24.117 -08 000000069 INF: ======================================
17-02-28 20:19:24.117 -08 000000087 INF: ======================================
17-02-28 20:19:24.117 -08 000000090 INF: ======================================
17-02-28 20:19:24.118 -08 000000051 INF: ======================================
17-02-28 20:19:24.118 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:24.118 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:24.119 -08 000000010 INF: ======================================
17-02-28 20:19:24.119 -08 000000060 INF: ======================================
17-02-28 20:19:24.120 -08 000000058 INF: ======================================
17-02-28 20:19:24.139 -08 000000064 INF: FPGA: Recv ZTRG 
17-02-28 20:19:24.139 -08 000000052 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:24.141 -08 000000109 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:24.141 -08 000000109 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:24.141 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.141 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:24.141 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:24.204 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:19:24.204 -08 000000052 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:24.204 -08 000000052 INF: FPGA: Xmit ZMV 18548\n
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:24.206 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.206 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Moving to 16.6573 mm @15.000 mm/sec, started at 17.1982 mm
17-02-28 20:19:24.206 -08 000000109 INF: X Motor: Xmit MA -17344\n
17-02-28 20:19:24.266 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:24.266 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Set target position to 5948529 encoder counts
17-02-28 20:19:24.268 -08 000000101 INF: Y Motor: Xmit s r0xca 5948529\r
17-02-28 20:19:24.269 -08 000000109 INF: X Motor: Recv MA -17344\r\n>
17-02-28 20:19:24.269 -08 000000109 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:19:24.328 -08 000000038 INF: FPGA: Recv ZMV 
17-02-28 20:19:24.328 -08 000000052 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.7402 ms
17-02-28 20:19:24.328 -08 000000052 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:24.330 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.330 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:19:24.330 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:24.390 -08 000000077 INF: FPGA: Recv ZDACR 18548
17-02-28 20:19:24.390 -08 000000052 INF: Z Motor: MoveAndTrigger took 277.0077 ms w/comms
17-02-28 20:19:24.390 -08 000000052 INF: Z Motor: After move to -0.0708, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:24.390 -08 000000052 INF: Z Motor: MoveAbsStepped took 277.1746 ms
17-02-28 20:19:24.390 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:24.392 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:24.392 -08 000000101 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:19:24.392 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:24.392 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:24.393 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.393 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:19:24.393 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.394 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:24.394 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:24.394 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:24.395 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:24.395 -08 000000086 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:24.452 -08 000000081 INF: FPGA: Recv ZSEL 
17-02-28 20:19:24.453 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:24.453 -08 000000086 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:24.515 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:19:24.515 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:24.516 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:24.517 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.518 -08 000000101 INF: Y Motor: Unshifted Position: 5875106
17-02-28 20:19:24.518 -08 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:24.519 -08 000000086 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:24.519 -08 000000086 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:24.568 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:24.576 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:24.576 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.578 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:24.578 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.580 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:24.580 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:24.580 -08 000000086 INF: Z Motor: Arming to move to -0.0308 mm
17-02-28 20:19:24.580 -08 000000086 INF: FPGA: Xmit ZYT 6428529 4\n
17-02-28 20:19:24.639 -08 000000077 INF: FPGA: Recv ZYT 
17-02-28 20:19:24.639 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6375106 enc / 63.751 mm / ) = 6428529 enc / 64.285 mm
17-02-28 20:19:24.639 -08 000000086 INF: FPGA: Xmit ZARM 8062\n
17-02-28 20:19:24.692 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:24.703 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:19:24.703 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.9907 ms
17-02-28 20:19:24.703 -08 000000086 INF: Z Motor: ArmAbsStepped took 122.669 ms
17-02-28 20:19:24.703 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:24.705 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.705 -08 000000109 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:24.706 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:24.707 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.708 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:24.708 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:24.710 -08 000000086 INF: ======================================
17-02-28 20:19:24.767 -08 000000109 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:24.767 -08 000000109 INF: X Motor: Moved to 16.6563 after 498 ms
17-02-28 20:19:24.767 -08 000000109 INF: ======================================
17-02-28 20:19:24.829 -08 000000101 INF: Y Motor: Unshifted Position: 5948530
17-02-28 20:19:24.829 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:24.829 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:24.891 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:24.891 -08 000000101 INF: Y Motor: Moved to 64.4853 after 499 ms
17-02-28 20:19:24.891 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:24.953 -08 000000101 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:24.953 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:24.953 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:25.015 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:25.015 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:25.015 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:25.077 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:25.142 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:25.204 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:25.204 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:25.204 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:25.266 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:19:25.266 -08 000000101 INF: ======================================
17-02-28 20:19:25.267 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:19:25.268 -08 000000105 INF: ======================================
17-02-28 20:19:25.357 -08 000000073 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:25.358 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:25.358 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:25.373 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:25.375 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:26.417 -08 000000073 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:26.417 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:26.417 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:26.433 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:26.435 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:19:26.436 -08 000000073 INF: ======================================
17-02-28 20:19:26.437 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:26.438 -08 000000052 INF: ======================================
17-02-28 20:19:26.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:26.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:26.440 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:19:26.440 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:19:26.513 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:26.513 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:19:26.576 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:26.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:26.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:26.576 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:26.592 -08 000000073 INF: RunCopyService queue size at 2/28/2017 8:19:26 PM is 2
17-02-28 20:19:26.636 -08 000000089 INF: FPGA: Recv TDIYERD 6448530
17-02-28 20:19:26.636 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448530 counts (64.485 mm)
17-02-28 20:19:26.636 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:26.637 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:26.637 -08 000000078 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:26.637 -08 000000075 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:26.638 -08 000000075 INF: ======================================
17-02-28 20:19:26.638 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:26.639 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:26.639 -08 000000078 INF: FPGA: Xmit TDIYPOS 6337604\n
17-02-28 20:19:26.701 -08 000000072 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:26.701 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:26.703 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:26.703 -08 000000078 INF: FPGA: Xmit TDIYARM3 139264 6428529 1 1\n
17-02-28 20:19:26.763 -08 000000058 INF: FPGA: Recv TDIYARM3
17-02-28 20:19:26.763 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:26.764 -08 000000078 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:26.765 -08 000000078 INF: ======================================
17-02-28 20:19:26.766 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:26.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:26.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:26.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:26.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:26.769 -08 000000109 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:26.769 -08 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:26.769 -08 000000109 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:26.769 -08 000000109 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:26.769 -08 000000109 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:26.769 -08 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:26.769 -08 000000109 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:26.769 -08 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:26.769 -08 000000025 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:26.772 -08 000000025 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:27.135 -08 000000057 INF: FPGA: Recv EX1MV
17-02-28 20:19:27.135 -08 000000057 INF: FPGA: Recv EX2MV
17-02-28 20:19:27.135 -08 000000025 INF: Excitation Filter 2: Moved -107 steps in 365.5278 ms
17-02-28 20:19:27.135 -08 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.6544 ms
17-02-28 20:19:27.135 -08 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.7255 ms
17-02-28 20:19:27.135 -08 000000109 INF: Excitation Filter 1: Moved -107 steps in 365.7244 ms
17-02-28 20:19:27.135 -08 000000109 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.9121 ms
17-02-28 20:19:27.135 -08 000000109 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.9783 ms
17-02-28 20:19:27.135 -08 000000025 INF: ======================================
17-02-28 20:19:27.135 -08 000000109 INF: ======================================
17-02-28 20:19:27.136 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:27.137 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:27.138 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:19:27.138 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:27.138 -08 000000060 INF: ===================FPGA Z Wait===================
17-02-28 20:19:27.138 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:27.138 -08 000000045 INF: Y Motor: Moving to 14.8369 mm @6.500 mm/sec, started at 64.4853 mm
17-02-28 20:19:27.139 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:27.139 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:27.139 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:27.139 -08 000000050 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:27.139 -08 000000050 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:27.140 -08 000000060 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:27.140 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:19:27.140 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:27.142 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.142 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.144 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.144 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.202 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.202 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:27.202 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:27.264 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.264 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:27.292 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.292 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.294 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.294 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Set target position to 983695 encoder counts
17-02-28 20:19:27.326 -08 000000045 INF: Y Motor: Xmit s r0xca 983695\r
17-02-28 20:19:27.390 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.390 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:19:27.390 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:27.442 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.442 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.444 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:27.444 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:27.450 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:27.450 -08 000000045 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:19:27.450 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:27.511 -08 000000086 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:27.512 -08 000000060 INF: ======================================
17-02-28 20:19:27.575 -08 000000045 INF: Y Motor: Unshifted Position: 5886461
17-02-28 20:19:27.592 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:27.592 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:27.592 -08 000000033 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:27.594 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:27.594 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:27.594 -08 000000085 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:27.625 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:27.749 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:27.755 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:19:27.755 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:19:27.755 -08 000000033 INF: ===================Camera #0 Frame #10===================
17-02-28 20:19:27.761 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:19:27.761 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:19:27.761 -08 000000085 INF: ===================Camera #2 Frame #11===================
17-02-28 20:19:27.890 -08 000000045 INF: Y Motor: Unshifted Position: 5683009
17-02-28 20:19:27.923 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:27.923 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:27.923 -08 000000033 INF: ===================Camera #0 Frame #17===================
17-02-28 20:19:27.930 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:27.930 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:27.930 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:19:27.940 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.062 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.095 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:28.095 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:28.095 -08 000000033 INF: ===================Camera #0 Frame #23===================
17-02-28 20:19:28.099 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:28.099 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:28.099 -08 000000085 INF: ===================Camera #2 Frame #23===================
17-02-28 20:19:28.198 -08 000000045 INF: Y Motor: Unshifted Position: 5481945
17-02-28 20:19:28.248 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.263 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:19:28.263 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:19:28.263 -08 000000033 INF: ===================Camera #0 Frame #29===================
17-02-28 20:19:28.268 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:19:28.268 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:19:28.268 -08 000000085 INF: ===================Camera #2 Frame #29===================
17-02-28 20:19:28.375 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.431 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:19:28.431 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:19:28.431 -08 000000033 INF: ===================Camera #0 Frame #35===================
17-02-28 20:19:28.437 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:19:28.437 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:19:28.437 -08 000000085 INF: ===================Camera #2 Frame #36===================
17-02-28 20:19:28.512 -08 000000045 INF: Y Motor: Unshifted Position: 5278495
17-02-28 20:19:28.562 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.600 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:19:28.600 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:19:28.600 -08 000000033 INF: ===================Camera #0 Frame #42===================
17-02-28 20:19:28.610 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:19:28.610 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:19:28.610 -08 000000085 INF: ===================Camera #2 Frame #42===================
17-02-28 20:19:28.685 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.772 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:19:28.772 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:19:28.772 -08 000000033 INF: ===================Camera #0 Frame #48===================
17-02-28 20:19:28.779 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:19:28.779 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:19:28.779 -08 000000085 INF: ===================Camera #2 Frame #48===================
17-02-28 20:19:28.824 -08 000000045 INF: Y Motor: Unshifted Position: 5074823
17-02-28 20:19:28.874 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:28.942 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:19:28.942 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:19:28.942 -08 000000033 INF: ===================Camera #0 Frame #54===================
17-02-28 20:19:28.949 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:19:28.949 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:19:28.949 -08 000000085 INF: ===================Camera #2 Frame #54===================
17-02-28 20:19:28.998 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.112 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:19:29.112 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:19:29.112 -08 000000033 INF: ===================Camera #0 Frame #60===================
17-02-28 20:19:29.120 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:19:29.120 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:19:29.120 -08 000000085 INF: ===================Camera #2 Frame #61===================
17-02-28 20:19:29.135 -08 000000045 INF: Y Motor: Unshifted Position: 4872676
17-02-28 20:19:29.185 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.282 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:19:29.282 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:19:29.282 -08 000000033 INF: ===================Camera #0 Frame #67===================
17-02-28 20:19:29.294 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:19:29.294 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:19:29.294 -08 000000085 INF: ===================Camera #2 Frame #67===================
17-02-28 20:19:29.311 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.447 -08 000000045 INF: Y Motor: Unshifted Position: 4669657
17-02-28 20:19:29.455 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:19:29.455 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:19:29.455 -08 000000033 INF: ===================Camera #0 Frame #73===================
17-02-28 20:19:29.465 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:19:29.465 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:19:29.465 -08 000000085 INF: ===================Camera #2 Frame #73===================
17-02-28 20:19:29.497 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.621 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.625 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:19:29.625 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:19:29.625 -08 000000033 INF: ===================Camera #0 Frame #79===================
17-02-28 20:19:29.635 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:19:29.635 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:19:29.635 -08 000000085 INF: ===================Camera #2 Frame #80===================
17-02-28 20:19:29.776 -08 000000045 INF: Y Motor: Unshifted Position: 4457745
17-02-28 20:19:29.795 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:19:29.795 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:19:29.795 -08 000000033 INF: ===================Camera #0 Frame #86===================
17-02-28 20:19:29.808 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:19:29.808 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:19:29.808 -08 000000085 INF: ===================Camera #2 Frame #86===================
17-02-28 20:19:29.826 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.949 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:29.968 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:19:29.968 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:19:29.968 -08 000000033 INF: ===================Camera #0 Frame #92===================
17-02-28 20:19:29.979 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:19:29.979 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:19:29.979 -08 000000085 INF: ===================Camera #2 Frame #92===================
17-02-28 20:19:30.087 -08 000000045 INF: Y Motor: Unshifted Position: 4253442
17-02-28 20:19:30.137 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.138 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:19:30.138 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:19:30.138 -08 000000033 INF: ===================Camera #0 Frame #98===================
17-02-28 20:19:30.149 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:19:30.149 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:19:30.150 -08 000000085 INF: ===================Camera #2 Frame #99===================
17-02-28 20:19:30.260 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.308 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:19:30.308 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:19:30.308 -08 000000033 INF: ===================Camera #0 Frame #104===================
17-02-28 20:19:30.324 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:19:30.324 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:19:30.324 -08 000000085 INF: ===================Camera #2 Frame #105===================
17-02-28 20:19:30.398 -08 000000045 INF: Y Motor: Unshifted Position: 4051280
17-02-28 20:19:30.448 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.478 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:19:30.478 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:19:30.479 -08 000000033 INF: ===================Camera #0 Frame #111===================
17-02-28 20:19:30.495 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:19:30.495 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:19:30.495 -08 000000085 INF: ===================Camera #2 Frame #111===================
17-02-28 20:19:30.574 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.652 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:19:30.652 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:19:30.652 -08 000000033 INF: ===================Camera #0 Frame #117===================
17-02-28 20:19:30.666 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:19:30.666 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:19:30.666 -08 000000085 INF: ===================Camera #2 Frame #118===================
17-02-28 20:19:30.710 -08 000000045 INF: Y Motor: Unshifted Position: 3848264
17-02-28 20:19:30.760 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.821 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:19:30.821 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:19:30.821 -08 000000033 INF: ===================Camera #0 Frame #123===================
17-02-28 20:19:30.840 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:19:30.840 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:19:30.840 -08 000000085 INF: ===================Camera #2 Frame #124===================
17-02-28 20:19:30.886 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:30.991 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:19:30.991 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:19:30.991 -08 000000033 INF: ===================Camera #0 Frame #130===================
17-02-28 20:19:31.011 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:19:31.011 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:19:31.011 -08 000000085 INF: ===================Camera #2 Frame #130===================
17-02-28 20:19:31.024 -08 000000045 INF: Y Motor: Unshifted Position: 3646111
17-02-28 20:19:31.074 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.164 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:19:31.164 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:19:31.164 -08 000000033 INF: ===================Camera #0 Frame #136===================
17-02-28 20:19:31.182 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:19:31.182 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:19:31.182 -08 000000085 INF: ===================Camera #2 Frame #137===================
17-02-28 20:19:31.197 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.333 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:19:31.333 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:19:31.333 -08 000000033 INF: ===================Camera #0 Frame #142===================
17-02-28 20:19:31.335 -08 000000045 INF: Y Motor: Unshifted Position: 3441795
17-02-28 20:19:31.356 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:19:31.356 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:19:31.356 -08 000000085 INF: ===================Camera #2 Frame #143===================
17-02-28 20:19:31.385 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.502 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:19:31.502 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:19:31.502 -08 000000033 INF: ===================Camera #0 Frame #148===================
17-02-28 20:19:31.508 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.527 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:19:31.527 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:19:31.527 -08 000000085 INF: ===================Camera #2 Frame #149===================
17-02-28 20:19:31.648 -08 000000045 INF: Y Motor: Unshifted Position: 3240080
17-02-28 20:19:31.671 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:19:31.671 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:19:31.671 -08 000000033 INF: ===================Camera #0 Frame #155===================
17-02-28 20:19:31.698 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.698 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:19:31.698 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:19:31.698 -08 000000085 INF: ===================Camera #2 Frame #156===================
17-02-28 20:19:31.821 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:31.844 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:19:31.844 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:19:31.844 -08 000000033 INF: ===================Camera #0 Frame #161===================
17-02-28 20:19:31.872 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:19:31.872 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:19:31.872 -08 000000085 INF: ===================Camera #2 Frame #162===================
17-02-28 20:19:31.959 -08 000000045 INF: Y Motor: Unshifted Position: 3035985
17-02-28 20:19:32.009 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.014 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:19:32.014 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:19:32.014 -08 000000033 INF: ===================Camera #0 Frame #167===================
17-02-28 20:19:32.043 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:19:32.043 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:19:32.043 -08 000000085 INF: ===================Camera #2 Frame #168===================
17-02-28 20:19:32.132 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.184 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:19:32.184 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:19:32.184 -08 000000033 INF: ===================Camera #0 Frame #173===================
17-02-28 20:19:32.214 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:19:32.214 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:19:32.214 -08 000000085 INF: ===================Camera #2 Frame #175===================
17-02-28 20:19:32.270 -08 000000045 INF: Y Motor: Unshifted Position: 2833835
17-02-28 20:19:32.320 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.354 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:19:32.354 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:19:32.354 -08 000000033 INF: ===================Camera #0 Frame #180===================
17-02-28 20:19:32.388 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:19:32.388 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:19:32.388 -08 000000085 INF: ===================Camera #2 Frame #181===================
17-02-28 20:19:32.446 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.527 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:19:32.527 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:19:32.527 -08 000000033 INF: ===================Camera #0 Frame #186===================
17-02-28 20:19:32.559 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:19:32.559 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:19:32.559 -08 000000085 INF: ===================Camera #2 Frame #187===================
17-02-28 20:19:32.582 -08 000000045 INF: Y Motor: Unshifted Position: 2631478
17-02-28 20:19:32.632 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.696 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:19:32.696 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:19:32.696 -08 000000033 INF: ===================Camera #0 Frame #192===================
17-02-28 20:19:32.730 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:19:32.730 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:19:32.730 -08 000000085 INF: ===================Camera #2 Frame #194===================
17-02-28 20:19:32.758 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:32.866 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:19:32.866 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:19:32.866 -08 000000033 INF: ===================Camera #0 Frame #199===================
17-02-28 20:19:32.893 -08 000000045 INF: Y Motor: Unshifted Position: 2428678
17-02-28 20:19:32.904 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:19:32.904 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:19:32.904 -08 000000085 INF: ===================Camera #2 Frame #200===================
17-02-28 20:19:32.943 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.039 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:19:33.039 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:19:33.039 -08 000000033 INF: ===================Camera #0 Frame #205===================
17-02-28 20:19:33.069 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.075 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:19:33.075 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:19:33.075 -08 000000085 INF: ===================Camera #2 Frame #206===================
17-02-28 20:19:33.207 -08 000000045 INF: Y Motor: Unshifted Position: 2224366
17-02-28 20:19:33.209 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:19:33.209 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:19:33.209 -08 000000033 INF: ===================Camera #0 Frame #211===================
17-02-28 20:19:33.246 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:19:33.246 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:19:33.246 -08 000000085 INF: ===================Camera #2 Frame #213===================
17-02-28 20:19:33.257 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.378 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:19:33.378 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:19:33.378 -08 000000033 INF: ===================Camera #0 Frame #217===================
17-02-28 20:19:33.380 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.419 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:19:33.419 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:19:33.419 -08 000000085 INF: ===================Camera #2 Frame #219===================
17-02-28 20:19:33.518 -08 000000045 INF: Y Motor: Unshifted Position: 2022003
17-02-28 20:19:33.548 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:19:33.548 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:19:33.548 -08 000000033 INF: ===================Camera #0 Frame #224===================
17-02-28 20:19:33.568 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.588 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:19:33.588 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:19:33.588 -08 000000085 INF: ===================Camera #2 Frame #225===================
17-02-28 20:19:33.694 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.721 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:19:33.721 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:19:33.721 -08 000000033 INF: ===================Camera #0 Frame #230===================
17-02-28 20:19:33.759 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:19:33.759 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:19:33.759 -08 000000085 INF: ===================Camera #2 Frame #231===================
17-02-28 20:19:33.829 -08 000000045 INF: Y Motor: Unshifted Position: 1819840
17-02-28 20:19:33.879 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:33.891 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:19:33.891 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:19:33.891 -08 000000033 INF: ===================Camera #0 Frame #236===================
17-02-28 20:19:33.930 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:19:33.930 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:19:33.930 -08 000000085 INF: ===================Camera #2 Frame #238===================
17-02-28 20:19:34.005 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.061 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:19:34.061 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:19:34.061 -08 000000033 INF: ===================Camera #0 Frame #243===================
17-02-28 20:19:34.104 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:19:34.104 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:19:34.104 -08 000000085 INF: ===================Camera #2 Frame #244===================
17-02-28 20:19:34.143 -08 000000045 INF: Y Motor: Unshifted Position: 1615747
17-02-28 20:19:34.193 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.234 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:19:34.234 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:19:34.234 -08 000000033 INF: ===================Camera #0 Frame #249===================
17-02-28 20:19:34.275 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:19:34.275 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:19:34.275 -08 000000085 INF: ===================Camera #2 Frame #250===================
17-02-28 20:19:34.316 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.404 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:19:34.404 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:19:34.404 -08 000000033 INF: ===================Camera #0 Frame #255===================
17-02-28 20:19:34.446 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:19:34.446 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:19:34.446 -08 000000085 INF: ===================Camera #2 Frame #257===================
17-02-28 20:19:34.454 -08 000000045 INF: Y Motor: Unshifted Position: 1413372
17-02-28 20:19:34.504 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.574 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:19:34.574 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:19:34.574 -08 000000033 INF: ===================Camera #0 Frame #261===================
17-02-28 20:19:34.619 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:19:34.619 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:19:34.619 -08 000000085 INF: ===================Camera #2 Frame #263===================
17-02-28 20:19:34.630 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.744 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:19:34.744 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:19:34.744 -08 000000033 INF: ===================Camera #0 Frame #268===================
17-02-28 20:19:34.766 -08 000000045 INF: Y Motor: Unshifted Position: 1210352
17-02-28 20:19:34.790 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:19:34.790 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:19:34.790 -08 000000085 INF: ===================Camera #2 Frame #269===================
17-02-28 20:19:34.816 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:34.875 -08 000000025 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:34.875 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:34.877 -08 000000050 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:34.878 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:34.878 -08 000000073 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:34.878 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:34.878 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:34.878 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:34.878 -08 000000073 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:34.878 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:34.878 -08 000000073 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:34.878 -08 000000073 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:34.879 -08 000000073 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:34.916 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:34.916 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:34.916 -08 000000033 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:34.929 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:34.930 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:34.942 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:35.077 -08 000000045 INF: Y Motor: Unshifted Position: 1008211
17-02-28 20:19:35.090 -08 000000033 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:35.090 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:35.090 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:35.090 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:35.090 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:19:35.099 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:35.100 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:35.123 -08 000000033 INF: ======================================
17-02-28 20:19:35.127 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:35.249 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:19:35.249 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:19:35.249 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 370.573 ms
17-02-28 20:19:35.249 -08 000000073 INF: Excitation Filter 2: Moved 107 steps in 370.4582 ms
17-02-28 20:19:35.249 -08 000000073 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.665 ms
17-02-28 20:19:35.249 -08 000000073 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.7741 ms
17-02-28 20:19:35.249 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.684 ms
17-02-28 20:19:35.249 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1961 ms
17-02-28 20:19:35.249 -08 000000073 INF: ======================================
17-02-28 20:19:35.249 -08 000000060 INF: ======================================
17-02-28 20:19:35.251 -08 000000050 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:35.252 -08 000000050 INF: ======================================
17-02-28 20:19:35.265 -08 000000045 INF: Y Motor: Unshifted Position: 983693
17-02-28 20:19:35.265 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:35.265 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:35.294 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:35.294 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:19:35.329 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:35.329 -08 000000045 INF: Y Motor: Moved to 14.8369 after 7879 ms
17-02-28 20:19:35.329 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:35.329 -08 000000085 INF: ======================================
17-02-28 20:19:35.330 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:19:35.331 -08 000000036 INF: ======================================
17-02-28 20:19:35.391 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:35.391 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:35.391 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:35.453 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:35.453 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:35.453 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:35.514 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:35.579 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:35.639 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:35.639 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:35.639 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:35.701 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:19:35.701 -08 000000045 INF: ======================================
17-02-28 20:19:35.702 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:35.703 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:35.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.704 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:35.748 -08 000000078 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:35.748 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:35.812 -08 000000057 INF: FPGA: Recv TDIYERD 1483696
17-02-28 20:19:35.812 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:35.872 -08 000000030 INF: FPGA: Recv ZADCR 17753
17-02-28 20:19:35.872 -08 000000018 INF: At scan end Y pos = 14.837 and Z pos = -0.068. Y moved -48.539 mm
17-02-28 20:19:35.872 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:35.935 -08 000000053 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:35.935 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:35.936 -08 000000018 INF: TDIScan finished after 11846.0464 ms
17-02-28 20:19:35.936 -08 000000018 INF: Image[0]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:19:35.936 -08 000000018 INF: Image[2]: Y should trigger at 63.376 mm, 2nd row was at 64.285 mm (error = 0.909 mm)
17-02-28 20:19:35.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.971 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.890 um
17-02-28 20:19:35.971 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.972 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:35.998 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:35.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:35.999 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:35.999 -08 000000082 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:35.999 -08 000000077 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:35.999 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:36.000 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:36.000 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:36.000 -08 000000082 INF: ======================================
17-02-28 20:19:36.000 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:36.000 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:36.000 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:36.000 -08 000000025 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:36.001 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:36.003 -08 000000025 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:36.029 -08 000000025 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:36.029 -08 000000025 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:36.030 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.030 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.031 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.031 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.031 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:36.061 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:36.061 -08 000000045 INF: FPGA: Recv ZSEL 
17-02-28 20:19:36.061 -08 000000058 INF: FPGA: Xmit ZDACW 18548\n
17-02-28 20:19:36.062 -08 000000064 INF: ======================================
17-02-28 20:19:36.077 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.077 -08 000000077 INF: ======================================
17-02-28 20:19:36.107 -08 000000078 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.107 -08 000000052 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.107 -08 000000081 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.107 -08 000000047 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:36.121 -08 000000050 INF: FPGA: Recv ZDACW 
17-02-28 20:19:36.121 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:36.122 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:36.184 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:19:36.184 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:36.185 -08 000000058 INF: ======================================
17-02-28 20:19:36.260 -08 000000078 INF: LFT found best fwhm score 2.000102 in 152 ms
17-02-28 20:19:36.260 -08 000000052 INF: LFT found best fwhm score 2.006898 in 152 ms
17-02-28 20:19:36.260 -08 000000078 INF: LFT found good score at index 3645 with fwhm value 2.000102. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.260 -08 000000052 INF: LFT found good score at index 7097 with fwhm value 2.006898. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.260 -08 000000081 INF: LFT found best fwhm score 2.00003 in 152 ms
17-02-28 20:19:36.260 -08 000000081 INF: LFT found good score at index 2713 with fwhm value 2.00003. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.260 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.260 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.260 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.261 -08 000000078 INF: ======================================
17-02-28 20:19:36.261 -08 000000047 INF: LFT found best fwhm score 2.000798 in 153 ms
17-02-28 20:19:36.261 -08 000000047 INF: LFT found good score at index 3713 with fwhm value 2.000798. Next cycle, cycle 4 starting Z position for bottom surface is at -0.050 mm FC:A, C:3,L:5,B
17-02-28 20:19:36.261 -08 000000081 INF: ======================================
17-02-28 20:19:36.261 -08 000000052 INF: ======================================
17-02-28 20:19:36.261 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:19:36.261 -08 000000047 INF: ======================================
17-02-28 20:19:36.262 -08 000000025 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:36.263 -08 000000025 INF: LFT weighted average best Z for bottom surface is at -0.050mm FC:A, C:3,L:5,B
17-02-28 20:19:36.263 -08 000000025 INF: ======================================
17-02-28 20:19:36.264 -08 000000034 INF: ======================================
17-02-28 20:19:36.265 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:36.266 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:36.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 16.62733 Y = 39.70494===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:36.268 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:36.291 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:36.291 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:36.292 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:36.292 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.292 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:36.292 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:36.292 -08 000000018 INF: Transformed XStagePosition from 17.73533 mm to 17.7594843972474 mm.
17-02-28 20:19:36.333 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4870107400939 mm.
17-02-28 20:19:36.333 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2870107400939 mm.
17-02-28 20:19:36.333 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3777607400939 mm.
17-02-28 20:19:36.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.340 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:36.340 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:36.341 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -70.8 um, section = E_1
17-02-28 20:19:36.343 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":5,"Tile":2104,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF244","HCSMMF237","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.344 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:36.345 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:36.349 -08 000000050 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:36.363 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:36.363 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:36.363 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:36.364 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:36.364 -08 000000038 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:36.364 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:36.366 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:36.367 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:36.367 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:36.371 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:36.371 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:36.372 -08 000000087 INF: ======================================
17-02-28 20:19:36.372 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:36.372 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.373 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.373 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:36.374 -08 000000052 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:36.374 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:19:36.374 -08 000000030 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:36.374 -08 000000030 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:36.374 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:36.374 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:36.374 -08 000000030 INF: ======================================
17-02-28 20:19:36.374 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:36.374 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:36.375 -08 000000066 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:36.375 -08 000000052 INF: ======================================
17-02-28 20:19:36.376 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:36.376 -08 000000034 INF: ===================Camera Arm TDI===================
17-02-28 20:19:36.376 -08 000000030 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:36.377 -08 000000030 INF: ======================================
17-02-28 20:19:36.377 -08 000000052 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:36.377 -08 000000086 INF: ======================================
17-02-28 20:19:36.377 -08 000000025 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:36.377 -08 000000034 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:36.377 -08 000000052 INF: ======================================
17-02-28 20:19:36.378 -08 000000025 INF: ======================================
17-02-28 20:19:36.378 -08 000000075 INF: ===================Move X Motor without settling===================
17-02-28 20:19:36.378 -08 000000075 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:36.378 -08 000000034 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:36.379 -08 000000030 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:36.379 -08 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:36.379 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:36.379 -08 000000030 INF: ======================================
17-02-28 20:19:36.379 -08 000000052 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:36.379 -08 000000052 INF: Y Motor: Moving to 64.4870 mm @25.000 mm/sec, started at 14.8369 mm
17-02-28 20:19:36.380 -08 000000086 INF: ======================================
17-02-28 20:19:36.380 -08 000000052 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:36.380 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:36.380 -08 000000078 INF: ======================================
17-02-28 20:19:36.380 -08 000000073 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:36.381 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:36.382 -08 000000073 INF: ======================================
17-02-28 20:19:36.382 -08 000000087 INF: ======================================
17-02-28 20:19:36.383 -08 000000050 INF: ======================================
17-02-28 20:19:36.435 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:19:36.436 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:36.437 -08 000000066 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:36.453 -08 000000075 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:36.453 -08 000000075 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:36.453 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.453 -08 000000052 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:36.453 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:36.502 -08 000000085 INF: FPGA: Recv TDIBB
17-02-28 20:19:36.503 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:36.504 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":5,"Tile":2103,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF194","HCSMMF180","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.504 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:36.504 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":5,"Tile":2106,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF254","HCSMMF267","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.505 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.505 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":5,"Tile":2102,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF205","HCSMMF287","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.506 -08 000000066 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:36.507 -08 000000066 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:36.507 -08 000000066 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:36.507 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":5,"Tile":2105,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF273","HCSMMF250","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.507 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":5,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF243","HCSMMF213","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.508 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":5,"Tile":2112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF222","HCSMMF202","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.509 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":5,"Tile":2107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF193","HCSMMF179","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.510 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":5,"Tile":2101,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF228","HCSMMF265","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.510 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":5,"Tile":2109,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF232","HCSMMF284","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.511 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":5,"Tile":2110,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF269","HCSMMF214","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.512 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":5,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF263","HCSMMF196","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.512 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":5,"Tile":2113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF255","HCSMMF203","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.513 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.513 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Moving to 17.7595 mm @15.000 mm/sec, started at 16.6563 mm
17-02-28 20:19:36.513 -08 000000075 INF: X Motor: Xmit MA -16892\n
17-02-28 20:19:36.513 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":5,"Tile":2114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF207","HCSMMF230","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.514 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":5,"Tile":2116,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF268","HCSMMF282","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.515 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":5,"Tile":2118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF285","HCSMMF281","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.515 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":5,"Tile":2115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF185","HCSMMF240","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.516 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":5,"Tile":2119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF239","HCSMMF276","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.517 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":5,"Tile":2117,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF283","HCSMMF187","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.518 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":5,"Tile":2121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF278","HCSMMF286","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.519 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":5,"Tile":2120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF209","HCSMMF257","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.520 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":5,"Tile":2122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF201","HCSMMF272","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.520 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":5,"Tile":2123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF274","HCSMMF198","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.521 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":5,"Tile":2124,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF260","HCSMMF176","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.522 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":5,"Tile":2125,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF181","HCSMMF271","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.522 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":5,"Tile":2127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF226","HCSMMF192","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.525 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":5,"Tile":2126,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF251","HCSMMF277","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.527 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":5,"Tile":2128,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF225","HCSMMF215","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:36.542 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.548 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:36.562 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:36.563 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.565 -08 000000066 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:36.565 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.567 -08 000000066 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:36.567 -08 000000066 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:36.567 -08 000000066 INF: Z Motor: Arming to move to -0.0308 mm
17-02-28 20:19:36.567 -08 000000066 INF: FPGA: Xmit ZYT 6428701 4\n
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:36.577 -08 000000075 INF: X Motor: Recv MA -16892\r\n>
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Set target position to 5948701 encoder counts
17-02-28 20:19:36.577 -08 000000052 INF: Y Motor: Xmit s r0xca 5948701\r
17-02-28 20:19:36.577 -08 000000075 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:19:36.622 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:19:36.622 -08 000000066 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483693 enc / 14.837 mm / ) = 6428701 enc / 64.287 mm
17-02-28 20:19:36.622 -08 000000066 INF: FPGA: Xmit ZARM 8062\n
17-02-28 20:19:36.638 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.638 -08 000000052 INF: Y Motor: Start the move command
17-02-28 20:19:36.638 -08 000000052 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:36.640 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.640 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:36.677 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.683 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:36.685 -08 000000053 INF: FPGA: Recv ZARM
17-02-28 20:19:36.685 -08 000000066 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.8913 ms
17-02-28 20:19:36.685 -08 000000066 INF: Z Motor: ArmAbsStepped took 118.007 ms
17-02-28 20:19:36.685 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:36.687 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.688 -08 000000066 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:36.688 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.690 -08 000000066 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:36.690 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:19:36.692 -08 000000066 INF: ======================================
17-02-28 20:19:36.703 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:36.703 -08 000000052 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:19:36.703 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:36.766 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.772 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:36.826 -08 000000052 INF: Y Motor: Unshifted Position: 1067447
17-02-28 20:19:36.863 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.869 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:36.876 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:36.966 -08 000000034 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:36.966 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:36.966 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:36.976 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:36.981 -08 000000034 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:36.983 -08 000000034 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:37.002 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.137 -08 000000052 INF: Y Motor: Unshifted Position: 1772033
17-02-28 20:19:37.187 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.201 -08 000000075 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:37.261 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:37.263 -08 000000075 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:37.263 -08 000000075 INF: X Motor: Moved to 17.7598 after 686 ms
17-02-28 20:19:37.263 -08 000000075 INF: ======================================
17-02-28 20:19:37.313 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.451 -08 000000052 INF: Y Motor: Unshifted Position: 2557884
17-02-28 20:19:37.501 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.578 -08 000000034 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:37.578 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:37.579 -08 000000034 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:37.594 -08 000000034 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:37.596 -08 000000034 INF: ===================Camera Arm TDI===================
17-02-28 20:19:37.597 -08 000000034 INF: ======================================
17-02-28 20:19:37.598 -08 000000038 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:37.599 -08 000000038 INF: ======================================
17-02-28 20:19:37.624 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.762 -08 000000052 INF: Y Motor: Unshifted Position: 3336158
17-02-28 20:19:37.812 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:37.938 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.073 -08 000000052 INF: Y Motor: Unshifted Position: 4113729
17-02-28 20:19:38.123 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.249 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.387 -08 000000052 INF: Y Motor: Unshifted Position: 4898664
17-02-28 20:19:38.437 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.560 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.699 -08 000000052 INF: Y Motor: Unshifted Position: 5675486
17-02-28 20:19:38.749 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:38.872 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:39.010 -08 000000052 INF: Y Motor: Unshifted Position: 5948704
17-02-28 20:19:39.010 -08 000000052 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:39.010 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:39.074 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:39.074 -08 000000052 INF: Y Motor: Moved to 64.4870 after 2371 ms
17-02-28 20:19:39.074 -08 000000052 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:39.136 -08 000000052 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:39.136 -08 000000052 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:39.136 -08 000000052 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:39.198 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:39.198 -08 000000052 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:39.198 -08 000000052 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:39.259 -08 000000052 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: Recv v 0\r
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:39.321 -08 000000052 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:39.385 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:39.385 -08 000000052 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:39.385 -08 000000052 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:39.447 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:19:39.447 -08 000000052 INF: ======================================
17-02-28 20:19:39.449 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:19:39.450 -08 000000058 INF: ======================================
17-02-28 20:19:39.451 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:39.452 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:39.452 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:19:39.452 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:19:39.509 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:39.509 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:19:39.553 -08 000000087 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:39.554 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:39.618 -08 000000060 INF: FPGA: Recv TDIYERD 6448702
17-02-28 20:19:39.618 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448702 counts (64.487 mm)
17-02-28 20:19:39.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:39.619 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:39.620 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:39.620 -08 000000069 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:39.621 -08 000000069 INF: ======================================
17-02-28 20:19:39.621 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:39.621 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:39.621 -08 000000033 INF: FPGA: Xmit TDIYPOS 6337776\n
17-02-28 20:19:39.680 -08 000000053 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:39.681 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:39.683 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:39.683 -08 000000033 INF: FPGA: Xmit TDIYARM3 139264 6428701 1 1\n
17-02-28 20:19:39.742 -08 000000060 INF: FPGA: Recv TDIYARM3
17-02-28 20:19:39.743 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:19:39.744 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:19:39.745 -08 000000033 INF: ======================================
17-02-28 20:19:39.746 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:39.747 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:39.747 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:39.747 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:39.748 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:39.749 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:39.749 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:39.749 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:39.749 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:39.749 -08 000000085 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:39.749 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:39.749 -08 000000085 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:39.749 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:39.749 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:39.750 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:40.117 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:19:40.117 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:19:40.117 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 368.1152 ms
17-02-28 20:19:40.117 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 368.3107 ms
17-02-28 20:19:40.117 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2646 ms
17-02-28 20:19:40.117 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4084 ms
17-02-28 20:19:40.117 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.4932 ms
17-02-28 20:19:40.117 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.3696 ms
17-02-28 20:19:40.118 -08 000000085 INF: ======================================
17-02-28 20:19:40.118 -08 000000058 INF: ======================================
17-02-28 20:19:40.119 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:40.120 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:40.121 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:19:40.121 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:40.121 -08 000000057 INF: ===================FPGA Z Wait===================
17-02-28 20:19:40.121 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:40.121 -08 000000089 INF: Y Motor: Moving to 14.8387 mm @6.500 mm/sec, started at 64.4870 mm
17-02-28 20:19:40.122 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:40.122 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:40.122 -08 000000081 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:40.122 -08 000000086 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:40.122 -08 000000086 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:40.123 -08 000000057 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:40.123 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:19:40.123 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:19:40.125 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.125 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.125 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.125 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.196 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.196 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:40.196 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:40.258 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.258 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:40.275 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.275 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.275 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.275 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Set target position to 983867 encoder counts
17-02-28 20:19:40.320 -08 000000089 INF: Y Motor: Xmit s r0xca 983867\r
17-02-28 20:19:40.384 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.384 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:19:40.384 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:40.425 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.425 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.425 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:40.425 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:40.446 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:40.446 -08 000000089 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:19:40.446 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:40.552 -08 000000038 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:40.552 -08 000000057 INF: ======================================
17-02-28 20:19:40.569 -08 000000089 INF: Y Motor: Unshifted Position: 5887496
17-02-28 20:19:40.575 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:40.575 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:40.575 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:40.575 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:40.575 -08 000000090 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:40.575 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:19:40.619 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:40.744 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:40.744 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:19:40.744 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:19:40.744 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:19:40.744 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:19:40.744 -08 000000090 INF: ===================Camera #0 Frame #10===================
17-02-28 20:19:40.744 -08 000000064 INF: ===================Camera #2 Frame #10===================
17-02-28 20:19:40.882 -08 000000089 INF: Y Motor: Unshifted Position: 5683828
17-02-28 20:19:40.912 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 15, frameCount = 16.
17-02-28 20:19:40.912 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 16
17-02-28 20:19:40.912 -08 000000090 INF: ===================Camera #0 Frame #16===================
17-02-28 20:19:40.922 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:19:40.922 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:19:40.922 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:19:40.933 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.058 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.088 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:41.088 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:41.088 -08 000000090 INF: ===================Camera #0 Frame #23===================
17-02-28 20:19:41.101 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:19:41.101 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:19:41.101 -08 000000064 INF: ===================Camera #2 Frame #23===================
17-02-28 20:19:41.193 -08 000000089 INF: Y Motor: Unshifted Position: 5481469
17-02-28 20:19:41.243 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.269 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:19:41.269 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:19:41.269 -08 000000090 INF: ===================Camera #0 Frame #30===================
17-02-28 20:19:41.279 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:19:41.279 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:19:41.279 -08 000000064 INF: ===================Camera #2 Frame #30===================
17-02-28 20:19:41.369 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.443 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:19:41.443 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:19:41.443 -08 000000090 INF: ===================Camera #0 Frame #36===================
17-02-28 20:19:41.459 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:19:41.459 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:19:41.459 -08 000000064 INF: ===================Camera #2 Frame #37===================
17-02-28 20:19:41.507 -08 000000089 INF: Y Motor: Unshifted Position: 5277578
17-02-28 20:19:41.557 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.616 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:19:41.616 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:19:41.616 -08 000000090 INF: ===================Camera #0 Frame #42===================
17-02-28 20:19:41.640 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:19:41.640 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:19:41.640 -08 000000064 INF: ===================Camera #2 Frame #43===================
17-02-28 20:19:41.680 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.785 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:19:41.785 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:19:41.785 -08 000000090 INF: ===================Camera #0 Frame #49===================
17-02-28 20:19:41.810 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:19:41.810 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:19:41.810 -08 000000064 INF: ===================Camera #2 Frame #49===================
17-02-28 20:19:41.819 -08 000000089 INF: Y Motor: Unshifted Position: 5074352
17-02-28 20:19:41.869 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:41.967 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:19:41.967 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:19:41.967 -08 000000090 INF: ===================Camera #0 Frame #55===================
17-02-28 20:19:41.987 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:19:41.987 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:19:41.987 -08 000000064 INF: ===================Camera #2 Frame #56===================
17-02-28 20:19:41.992 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.130 -08 000000089 INF: Y Motor: Unshifted Position: 4872204
17-02-28 20:19:42.145 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:19:42.145 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:19:42.145 -08 000000090 INF: ===================Camera #0 Frame #62===================
17-02-28 20:19:42.161 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:19:42.161 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:19:42.161 -08 000000064 INF: ===================Camera #2 Frame #62===================
17-02-28 20:19:42.180 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.306 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.327 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:19:42.327 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:19:42.327 -08 000000090 INF: ===================Camera #0 Frame #69===================
17-02-28 20:19:42.340 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:19:42.340 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:19:42.340 -08 000000064 INF: ===================Camera #2 Frame #69===================
17-02-28 20:19:42.441 -08 000000089 INF: Y Motor: Unshifted Position: 4670052
17-02-28 20:19:42.491 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.508 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:19:42.508 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:19:42.508 -08 000000090 INF: ===================Camera #0 Frame #75===================
17-02-28 20:19:42.522 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:19:42.522 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:19:42.522 -08 000000064 INF: ===================Camera #2 Frame #76===================
17-02-28 20:19:42.617 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.682 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:19:42.682 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:19:42.682 -08 000000090 INF: ===================Camera #0 Frame #82===================
17-02-28 20:19:42.699 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:19:42.699 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:19:42.699 -08 000000064 INF: ===================Camera #2 Frame #82===================
17-02-28 20:19:42.753 -08 000000089 INF: Y Motor: Unshifted Position: 4465720
17-02-28 20:19:42.803 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:42.853 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:19:42.853 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:19:42.853 -08 000000090 INF: ===================Camera #0 Frame #88===================
17-02-28 20:19:42.868 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:19:42.868 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:19:42.868 -08 000000064 INF: ===================Camera #2 Frame #88===================
17-02-28 20:19:42.929 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.022 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:19:43.022 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:19:43.022 -08 000000090 INF: ===================Camera #0 Frame #94===================
17-02-28 20:19:43.038 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:19:43.038 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:19:43.038 -08 000000064 INF: ===================Camera #2 Frame #95===================
17-02-28 20:19:43.067 -08 000000089 INF: Y Motor: Unshifted Position: 4262708
17-02-28 20:19:43.117 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.191 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:19:43.191 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:19:43.191 -08 000000090 INF: ===================Camera #0 Frame #100===================
17-02-28 20:19:43.211 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:19:43.211 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:19:43.211 -08 000000064 INF: ===================Camera #2 Frame #101===================
17-02-28 20:19:43.240 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.359 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:19:43.359 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:19:43.359 -08 000000090 INF: ===================Camera #0 Frame #107===================
17-02-28 20:19:43.378 -08 000000089 INF: Y Motor: Unshifted Position: 4060549
17-02-28 20:19:43.380 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:19:43.380 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:19:43.380 -08 000000064 INF: ===================Camera #2 Frame #107===================
17-02-28 20:19:43.428 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.531 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:19:43.531 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:19:43.531 -08 000000090 INF: ===================Camera #0 Frame #113===================
17-02-28 20:19:43.549 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:19:43.549 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:19:43.549 -08 000000064 INF: ===================Camera #2 Frame #114===================
17-02-28 20:19:43.554 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.689 -08 000000089 INF: Y Motor: Unshifted Position: 3858186
17-02-28 20:19:43.699 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:19:43.699 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:19:43.699 -08 000000090 INF: ===================Camera #0 Frame #119===================
17-02-28 20:19:43.722 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:19:43.722 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:19:43.722 -08 000000064 INF: ===================Camera #2 Frame #120===================
17-02-28 20:19:43.739 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.866 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:43.868 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:19:43.868 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:19:43.868 -08 000000090 INF: ===================Camera #0 Frame #125===================
17-02-28 20:19:43.891 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:19:43.891 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:19:43.891 -08 000000064 INF: ===================Camera #2 Frame #126===================
17-02-28 20:19:44.001 -08 000000089 INF: Y Motor: Unshifted Position: 3655381
17-02-28 20:19:44.037 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:19:44.037 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:19:44.037 -08 000000090 INF: ===================Camera #0 Frame #131===================
17-02-28 20:19:44.051 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.060 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:19:44.060 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:19:44.060 -08 000000064 INF: ===================Camera #2 Frame #132===================
17-02-28 20:19:44.177 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.206 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:19:44.206 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:19:44.206 -08 000000090 INF: ===================Camera #0 Frame #138===================
17-02-28 20:19:44.229 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:19:44.229 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:19:44.229 -08 000000064 INF: ===================Camera #2 Frame #139===================
17-02-28 20:19:44.315 -08 000000089 INF: Y Motor: Unshifted Position: 3451280
17-02-28 20:19:44.365 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.377 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:19:44.377 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:19:44.377 -08 000000090 INF: ===================Camera #0 Frame #144===================
17-02-28 20:19:44.401 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:19:44.401 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:19:44.401 -08 000000064 INF: ===================Camera #2 Frame #145===================
17-02-28 20:19:44.488 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.545 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:19:44.545 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:19:44.545 -08 000000090 INF: ===================Camera #0 Frame #150===================
17-02-28 20:19:44.570 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:19:44.570 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:19:44.570 -08 000000064 INF: ===================Camera #2 Frame #151===================
17-02-28 20:19:44.626 -08 000000089 INF: Y Motor: Unshifted Position: 3248921
17-02-28 20:19:44.676 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.713 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:19:44.713 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:19:44.713 -08 000000090 INF: ===================Camera #0 Frame #156===================
17-02-28 20:19:44.739 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:19:44.739 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:19:44.739 -08 000000064 INF: ===================Camera #2 Frame #157===================
17-02-28 20:19:44.800 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:44.881 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:19:44.881 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:19:44.881 -08 000000090 INF: ===================Camera #0 Frame #163===================
17-02-28 20:19:44.907 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:19:44.907 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:19:44.907 -08 000000064 INF: ===================Camera #2 Frame #164===================
17-02-28 20:19:44.938 -08 000000089 INF: Y Motor: Unshifted Position: 3046122
17-02-28 20:19:44.988 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.052 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:19:45.052 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:19:45.052 -08 000000090 INF: ===================Camera #0 Frame #169===================
17-02-28 20:19:45.079 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:19:45.079 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:19:45.079 -08 000000064 INF: ===================Camera #2 Frame #170===================
17-02-28 20:19:45.114 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.220 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:19:45.220 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:19:45.220 -08 000000090 INF: ===================Camera #0 Frame #175===================
17-02-28 20:19:45.248 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:19:45.248 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:19:45.248 -08 000000064 INF: ===================Camera #2 Frame #176===================
17-02-28 20:19:45.249 -08 000000089 INF: Y Motor: Unshifted Position: 2843759
17-02-28 20:19:45.299 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.388 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:19:45.388 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:19:45.388 -08 000000090 INF: ===================Camera #0 Frame #181===================
17-02-28 20:19:45.417 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:19:45.417 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:19:45.417 -08 000000064 INF: ===================Camera #2 Frame #182===================
17-02-28 20:19:45.425 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.556 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:19:45.556 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:19:45.556 -08 000000090 INF: ===================Camera #0 Frame #187===================
17-02-28 20:19:45.563 -08 000000089 INF: Y Motor: Unshifted Position: 2639655
17-02-28 20:19:45.586 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:19:45.586 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:19:45.586 -08 000000064 INF: ===================Camera #2 Frame #189===================
17-02-28 20:19:45.613 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.724 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:19:45.724 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:19:45.724 -08 000000090 INF: ===================Camera #0 Frame #194===================
17-02-28 20:19:45.736 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.758 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:19:45.758 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:19:45.758 -08 000000064 INF: ===================Camera #2 Frame #195===================
17-02-28 20:19:45.875 -08 000000089 INF: Y Motor: Unshifted Position: 2436651
17-02-28 20:19:45.895 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:19:45.895 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:19:45.895 -08 000000090 INF: ===================Camera #0 Frame #200===================
17-02-28 20:19:45.925 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:45.927 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:19:45.927 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:19:45.927 -08 000000064 INF: ===================Camera #2 Frame #201===================
17-02-28 20:19:46.048 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.063 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:19:46.063 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:19:46.063 -08 000000090 INF: ===================Camera #0 Frame #206===================
17-02-28 20:19:46.096 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:19:46.096 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:19:46.096 -08 000000064 INF: ===================Camera #2 Frame #207===================
17-02-28 20:19:46.186 -08 000000089 INF: Y Motor: Unshifted Position: 2234500
17-02-28 20:19:46.231 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:19:46.231 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:19:46.231 -08 000000090 INF: ===================Camera #0 Frame #212===================
17-02-28 20:19:46.236 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.266 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:19:46.266 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:19:46.266 -08 000000064 INF: ===================Camera #2 Frame #214===================
17-02-28 20:19:46.363 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.400 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:19:46.400 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:19:46.400 -08 000000090 INF: ===================Camera #0 Frame #218===================
17-02-28 20:19:46.438 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:19:46.438 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:19:46.438 -08 000000064 INF: ===================Camera #2 Frame #220===================
17-02-28 20:19:46.498 -08 000000089 INF: Y Motor: Unshifted Position: 2032133
17-02-28 20:19:46.548 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.568 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:19:46.568 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:19:46.568 -08 000000090 INF: ===================Camera #0 Frame #225===================
17-02-28 20:19:46.607 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:19:46.607 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:19:46.607 -08 000000064 INF: ===================Camera #2 Frame #226===================
17-02-28 20:19:46.674 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.739 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:19:46.739 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:19:46.739 -08 000000090 INF: ===================Camera #0 Frame #231===================
17-02-28 20:19:46.776 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:19:46.776 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:19:46.776 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:19:46.810 -08 000000089 INF: Y Motor: Unshifted Position: 1827805
17-02-28 20:19:46.860 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:46.907 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:19:46.907 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:19:46.907 -08 000000090 INF: ===================Camera #0 Frame #237===================
17-02-28 20:19:46.945 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:19:46.945 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:19:46.945 -08 000000064 INF: ===================Camera #2 Frame #239===================
17-02-28 20:19:46.986 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.075 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:19:47.075 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:19:47.075 -08 000000090 INF: ===================Camera #0 Frame #243===================
17-02-28 20:19:47.118 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:19:47.118 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:19:47.118 -08 000000064 INF: ===================Camera #2 Frame #245===================
17-02-28 20:19:47.124 -08 000000089 INF: Y Motor: Unshifted Position: 1625013
17-02-28 20:19:47.174 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.243 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:19:47.243 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:19:47.243 -08 000000090 INF: ===================Camera #0 Frame #249===================
17-02-28 20:19:47.289 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:19:47.289 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:19:47.289 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:19:47.297 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.413 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:19:47.413 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:19:47.413 -08 000000090 INF: ===================Camera #0 Frame #256===================
17-02-28 20:19:47.436 -08 000000089 INF: Y Motor: Unshifted Position: 1421990
17-02-28 20:19:47.460 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:19:47.460 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:19:47.460 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:19:47.486 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.587 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:19:47.587 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:19:47.587 -08 000000090 INF: ===================Camera #0 Frame #262===================
17-02-28 20:19:47.609 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.631 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:19:47.631 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:19:47.631 -08 000000064 INF: ===================Camera #2 Frame #264===================
17-02-28 20:19:47.747 -08 000000089 INF: Y Motor: Unshifted Position: 1219838
17-02-28 20:19:47.757 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:19:47.757 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:19:47.757 -08 000000090 INF: ===================Camera #0 Frame #268===================
17-02-28 20:19:47.797 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.805 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:19:47.805 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:19:47.805 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:19:47.855 -08 000000045 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:47.855 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:47.857 -08 000000086 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:47.858 -08 000000108 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:47.858 -08 000000025 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:47.858 -08 000000108 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:47.858 -08 000000108 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:47.858 -08 000000108 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:47.858 -08 000000025 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:47.858 -08 000000025 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:47.858 -08 000000025 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:47.858 -08 000000108 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:47.859 -08 000000025 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:47.921 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:47.927 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:47.927 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:47.927 -08 000000090 INF: ===================Camera #0 Frame #272===================
17-02-28 20:19:47.940 -08 000000090 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:47.941 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:48.059 -08 000000089 INF: Y Motor: Unshifted Position: 1016820
17-02-28 20:19:48.071 -08 000000090 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:48.071 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:19:48.071 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:19:48.071 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:19:48.071 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:19:48.077 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:19:48.078 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:48.101 -08 000000090 INF: ======================================
17-02-28 20:19:48.109 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:48.231 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:19:48.231 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:19:48.232 -08 000000025 INF: Excitation Filter 2: Moved 107 steps in 373.5421 ms
17-02-28 20:19:48.232 -08 000000108 INF: Excitation Filter 1: Moved 107 steps in 373.7113 ms
17-02-28 20:19:48.232 -08 000000025 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.69 ms
17-02-28 20:19:48.232 -08 000000025 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.8056 ms
17-02-28 20:19:48.232 -08 000000108 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.8428 ms
17-02-28 20:19:48.232 -08 000000108 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.0519 ms
17-02-28 20:19:48.232 -08 000000025 INF: ======================================
17-02-28 20:19:48.232 -08 000000108 INF: ======================================
17-02-28 20:19:48.233 -08 000000086 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:48.235 -08 000000086 INF: ======================================
17-02-28 20:19:48.245 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:48.245 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:19:48.246 -08 000000089 INF: Y Motor: Unshifted Position: 983865
17-02-28 20:19:48.246 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:48.246 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:48.279 -08 000000064 INF: ======================================
17-02-28 20:19:48.280 -08 000000081 INF: ===================Camera TDI===================
17-02-28 20:19:48.281 -08 000000081 INF: ======================================
17-02-28 20:19:48.308 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:48.308 -08 000000089 INF: Y Motor: Moved to 14.8387 after 7861 ms
17-02-28 20:19:48.308 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:48.370 -08 000000089 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:48.370 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:48.370 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:48.434 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:48.434 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:48.434 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:48.496 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:48.557 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:48.619 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:48.619 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:48.619 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:48.684 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:19:48.684 -08 000000089 INF: ======================================
17-02-28 20:19:48.685 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:48.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:19:48.687 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.687 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:48.731 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:48.731 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:48.790 -08 000000052 INF: FPGA: Recv TDIYERD 1483869
17-02-28 20:19:48.790 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:48.853 -08 000000053 INF: FPGA: Recv ZADCR 17913
17-02-28 20:19:48.853 -08 000000018 INF: At scan end Y pos = 14.839 and Z pos = -0.069. Y moved -48.539 mm
17-02-28 20:19:48.853 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:48.915 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:19:48.915 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:19:48.915 -08 000000018 INF: TDIScan finished after 12621.9715 ms
17-02-28 20:19:48.915 -08 000000018 INF: Image[0]: Y should trigger at 63.378 mm, 2nd row was at 64.287 mm (error = 0.909 mm)
17-02-28 20:19:48.915 -08 000000018 INF: Image[2]: Y should trigger at 63.378 mm, 2nd row was at 64.287 mm (error = 0.909 mm)
17-02-28 20:19:48.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.952 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.840 um
17-02-28 20:19:48.952 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.953 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:48.978 -08 000000025 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:48.978 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:48.979 -08 000000050 INF: ===================Dither Clean Up Command===================
17-02-28 20:19:48.979 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:48.979 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:48.979 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:48.979 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:48.979 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:48.979 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:48.979 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:48.980 -08 000000086 INF: ======================================
17-02-28 20:19:48.980 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:48.980 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:48.981 -08 000000010 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:19:48.983 -08 000000058 INF: ===================LFT:Extracting coords===================
17-02-28 20:19:49.009 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:49.009 -08 000000058 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:19:49.010 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.010 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.010 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.011 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.011 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.011 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.011 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.012 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:19:49.040 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:49.040 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:19:49.040 -08 000000010 INF: FPGA: Xmit ZDACW 18548\n
17-02-28 20:19:49.041 -08 000000064 INF: ======================================
17-02-28 20:19:49.057 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:19:49.057 -08 000000038 INF: ======================================
17-02-28 20:19:49.085 -08 000000108 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.085 -08 000000075 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.085 -08 000000089 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.086 -08 000000077 INF: FC:A, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:19:49.102 -08 000000039 INF: FPGA: Recv ZDACW 
17-02-28 20:19:49.103 -08 000000010 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:19:49.103 -08 000000010 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:19:49.163 -08 000000052 INF: FPGA: Recv TDIBB
17-02-28 20:19:49.163 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:19:49.164 -08 000000010 INF: ======================================
17-02-28 20:19:49.236 -08 000000108 INF: LFT found best fwhm score 2.000005 in 151 ms
17-02-28 20:19:49.236 -08 000000108 INF: LFT found good score at index 469 with fwhm value 2.000005. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.236 -08 000000075 INF: LFT found best fwhm score 2.001784 in 151 ms
17-02-28 20:19:49.236 -08 000000075 INF: LFT found good score at index 1773 with fwhm value 2.001784. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.236 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.236 -08 000000089 INF: LFT found best fwhm score 2.000092 in 151 ms
17-02-28 20:19:49.237 -08 000000089 INF: LFT found good score at index 7921 with fwhm value 2.000092. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.237 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.237 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.237 -08 000000108 INF: ======================================
17-02-28 20:19:49.237 -08 000000077 INF: LFT found best fwhm score 2.003173 in 151 ms
17-02-28 20:19:49.237 -08 000000077 INF: LFT found good score at index 1097 with fwhm value 2.003173. Next cycle, cycle 4 starting Z position for bottom surface is at -0.051 mm FC:A, C:3,L:5,B
17-02-28 20:19:49.237 -08 000000075 INF: ======================================
17-02-28 20:19:49.237 -08 000000089 INF: ======================================
17-02-28 20:19:49.237 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:19:49.237 -08 000000077 INF: ======================================
17-02-28 20:19:49.238 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:19:49.239 -08 000000058 INF: LFT weighted average best Z for bottom surface is at -0.051mm FC:A, C:3,L:5,B
17-02-28 20:19:49.239 -08 000000058 INF: ======================================
17-02-28 20:19:49.240 -08 000000050 INF: ======================================
17-02-28 20:19:49.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:49.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:49.243 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:49.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:49.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:49.244 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:19:49.245 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 17.73533 Y = 39.70494===================
17-02-28 20:19:49.245 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:19:49.245 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:19:49.267 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:19:49.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:49.268 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:49.268 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:19:49.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:19:49.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:19:49.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.287 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:49.287 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:49.310 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":5,"Tile":2201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF225","HCSMMF279","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.347 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:49.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.349 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:49.350 -08 000000018 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:49.351 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.354 -08 000000060 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:49.354 -08 000000060 INF: ======================================
17-02-28 20:19:49.354 -08 000000072 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:49.359 -08 000000105 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:49.359 -08 000000072 INF: ======================================
17-02-28 20:19:49.360 -08 000000105 INF: ======================================
17-02-28 20:19:49.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.362 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:49.393 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:19:49.396 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":5,"Tile":2202,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF221","HCSMMF256","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.406 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:19:49.406 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:49.406 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:19:49.407 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.415 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:19:49.415 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:19:49.415 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:19:49.429 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":5,"Tile":2208,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF214","HCSMMF269","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.431 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:49.516 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":5,"Tile":2210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF194","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.517 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:49.517 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0708 mm
17-02-28 20:19:49.518 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:49.518 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":5,"Tile":2207,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF216","HCSMMF204","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.520 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":5,"Tile":2205,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF242","HCSMMF263","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.530 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":5,"Tile":2203,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF208","HCSMMF277","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.540 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":5,"Tile":2214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF219","HCSMMF176","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.542 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":5,"Tile":2206,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF200","HCSMMF245","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.543 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":5,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF235","HCSMMF270","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.545 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":5,"Tile":2213,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF250","HCSMMF177","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.546 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":5,"Tile":2209,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF268","HCSMMF228","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.547 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":5,"Tile":2204,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF271","HCSMMF251","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.548 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":5,"Tile":2211,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF285","HCSMMF195","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.549 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":5,"Tile":2216,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF212","HCSMMF227","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.550 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":5,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF239","HCSMMF237","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.551 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":5,"Tile":2212,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF262","HCSMMF286","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.551 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":5,"Tile":2219,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF276","HCSMMF284","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.552 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":5,"Tile":2222,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF259","HCSMMF272","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.553 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":5,"Tile":2227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF248","HCSMMF203","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.554 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":5,"Tile":2225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF218","HCSMMF266","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.554 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":5,"Tile":2228,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF255","HCSMMF186","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.555 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":5,"Tile":2217,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF287","HCSMMF229","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.556 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":5,"Tile":2224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF201","HCSMMF254","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.557 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":5,"Tile":2221,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF184","HCSMMF240","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.558 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":5,"Tile":2226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF264","HCSMMF179","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.559 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":5,"Tile":2223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF178","HCSMMF213","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.560 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":5,"Tile":2220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF244","HCSMMF206","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:19:49.564 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.569 -08 000000035 INF: FPGA: Recv ZTRG 
17-02-28 20:19:49.569 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:49.570 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:19:49.631 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:19:49.631 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:49.631 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:19:49.664 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.664 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:19:49.697 -08 000000075 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:49.697 -08 000000075 INF: FPGA: Recv ZMV 
17-02-28 20:19:49.697 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:49.697 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.9752 ms
17-02-28 20:19:49.697 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:49.703 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.708 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:19:49.756 -08 000000010 INF: FPGA: Recv ZDACR 60292
17-02-28 20:19:49.756 -08 000000018 INF: Z Motor: MoveAndTrigger took 239.1032 ms w/comms
17-02-28 20:19:49.756 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:49.756 -08 000000018 INF: Z Motor: MoveAbsStepped took 239.2679 ms
17-02-28 20:19:49.757 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.757 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.766 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:19:49.766 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:19:49.793 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.799 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:19:49.821 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:49.842 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:49.843 -08 000000018 INF: Transformed XStagePosition from 19.96393 mm to 19.9639301300049 mm.
17-02-28 20:19:49.851 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:19:49.851 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.851 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:19:49.853 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:49.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:49.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:49.854 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:19:49.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:49.855 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:49.856 -08 000000039 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:49.856 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:19:49.856 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:49.856 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:49.856 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:49.857 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:49.857 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:49.857 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:49.857 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:49.857 -08 000000069 INF: ===================Move X Motor without settling===================
17-02-28 20:19:49.857 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:49.858 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:49.858 -08 000000069 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:49.858 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:49.858 -08 000000058 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:49.858 -08 000000053 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:49.858 -08 000000035 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:49.858 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:49.858 -08 000000082 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:49.858 -08 000000060 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:49.859 -08 000000058 INF: ======================================
17-02-28 20:19:49.859 -08 000000034 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:49.859 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:49.859 -08 000000082 INF: ======================================
17-02-28 20:19:49.859 -08 000000087 INF: ======================================
17-02-28 20:19:49.859 -08 000000035 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:49.859 -08 000000034 INF: ======================================
17-02-28 20:19:49.860 -08 000000035 INF: ======================================
17-02-28 20:19:49.860 -08 000000060 INF: ======================================
17-02-28 20:19:49.860 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:49.860 -08 000000077 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8387 mm
17-02-28 20:19:49.861 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:49.861 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:49.861 -08 000000057 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:49.861 -08 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:49.861 -08 000000053 INF: ======================================
17-02-28 20:19:49.862 -08 000000051 INF: ======================================
17-02-28 20:19:49.862 -08 000000010 INF: ======================================
17-02-28 20:19:49.862 -08 000000057 INF: ======================================
17-02-28 20:19:49.862 -08 000000025 INF: ======================================
17-02-28 20:19:49.863 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:49.864 -08 000000090 INF: ======================================
17-02-28 20:19:49.865 -08 000000039 INF: ======================================
17-02-28 20:19:49.891 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:49.897 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:19:49.945 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:49.945 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:49.945 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:49.945 -08 000000069 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:49.945 -08 000000069 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:50.000 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:50.011 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Moving to 19.9639 mm @15.000 mm/sec, started at 17.7598 mm
17-02-28 20:19:50.011 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:50.011 -08 000000069 INF: X Motor: Xmit MA -15989\n
17-02-28 20:19:50.072 -08 000000069 INF: X Motor: Recv MA -15989\r\n>
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:50.072 -08 000000069 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:19:50.072 -08 000000077 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:19:50.135 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:50.135 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:19:50.135 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:50.197 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:50.197 -08 000000077 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:19:50.197 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.281 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:19:50.321 -08 000000077 INF: Y Motor: Unshifted Position: 1066648
17-02-28 20:19:50.371 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.495 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.635 -08 000000077 INF: Y Motor: Unshifted Position: 1771374
17-02-28 20:19:50.685 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.694 -08 000000069 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:50.759 -08 000000069 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:50.759 -08 000000069 INF: X Motor: Moved to 19.9644 after 687 ms
17-02-28 20:19:50.760 -08 000000069 INF: ======================================
17-02-28 20:19:50.809 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:50.947 -08 000000077 INF: Y Motor: Unshifted Position: 2546380
17-02-28 20:19:50.997 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.121 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.257 -08 000000077 INF: Y Motor: Unshifted Position: 3351327
17-02-28 20:19:51.307 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.431 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.571 -08 000000077 INF: Y Motor: Unshifted Position: 4107231
17-02-28 20:19:51.621 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.747 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:51.882 -08 000000077 INF: Y Motor: Unshifted Position: 4892998
17-02-28 20:19:51.932 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.055 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.195 -08 000000077 INF: Y Motor: Unshifted Position: 5666957
17-02-28 20:19:52.245 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.368 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:52.505 -08 000000077 INF: Y Motor: Unshifted Position: 5947055
17-02-28 20:19:52.505 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:52.505 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:52.567 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:52.567 -08 000000077 INF: Y Motor: Moved to 64.4706 after 2370 ms
17-02-28 20:19:52.567 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:52.629 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:52.629 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:52.629 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:52.691 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:52.691 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:52.691 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:52.753 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:52.819 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:52.880 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:52.880 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:52.880 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:52.942 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:52.942 -08 000000077 INF: ======================================
17-02-28 20:19:52.944 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:19:52.945 -08 000000030 INF: ======================================
17-02-28 20:19:52.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:52.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:52.948 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:19:52.948 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:19:53.004 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:19:53.004 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:19:53.065 -08 000000086 INF: FPGA: Recv ZFREQCL
17-02-28 20:19:53.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:19:53.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:53.067 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:53.127 -08 000000082 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:19:53.127 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:19:53.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:53.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:53.129 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.129 -08 000000064 INF: ===================Set YMotor gains for scans===================
17-02-28 20:19:53.129 -08 000000064 INF: ======================================
17-02-28 20:19:53.130 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:53.130 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.131 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:53.132 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:19:53.132 -08 000000086 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:19:53.188 -08 000000081 INF: FPGA: Recv TDIYPOS
17-02-28 20:19:53.189 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:53.190 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:19:53.191 -08 000000086 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:19:53.250 -08 000000050 INF: FPGA: Recv TDIYARM2
17-02-28 20:19:53.250 -08 000000086 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:19:53.252 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.253 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:53.253 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:53.255 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:53.256 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:53.256 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:53.628 -08 000000086 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:53.628 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:53.629 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:53.644 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:53.646 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:54.025 -08 000000086 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:19:54.025 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:19:54.025 -08 000000086 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:54.040 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:19:54.042 -08 000000086 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:19:54.044 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:54.046 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:54.047 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:54.048 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:54.051 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:54.051 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:54.051 -08 000000086 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:19:54.051 -08 000000086 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:19:54.065 -08 000000073 INF: FPGA: Recv ZYT 
17-02-28 20:19:54.065 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:19:54.065 -08 000000086 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:19:54.124 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:19:54.124 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.0257 ms
17-02-28 20:19:54.124 -08 000000086 INF: Z Motor: ArmAbsStepped took 72.8836 ms
17-02-28 20:19:54.125 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:54.126 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:19:54.127 -08 000000086 INF: ======================================
17-02-28 20:19:54.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:19:54.129 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:54.129 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.130 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.130 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.131 -08 000000082 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:19:54.131 -08 000000082 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:19:54.131 -08 000000082 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:19:54.131 -08 000000082 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:19:54.131 -08 000000082 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:19:54.132 -08 000000047 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:19:54.132 -08 000000047 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:19:54.132 -08 000000047 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:19:54.132 -08 000000047 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:19:54.133 -08 000000047 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:19:54.499 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:19:54.499 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:19:54.499 -08 000000047 INF: Excitation Filter 2: Moved -107 steps in 367.1393 ms
17-02-28 20:19:54.499 -08 000000047 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.2911 ms
17-02-28 20:19:54.499 -08 000000082 INF: Excitation Filter 1: Moved -107 steps in 367.6662 ms
17-02-28 20:19:54.499 -08 000000082 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.8229 ms
17-02-28 20:19:54.499 -08 000000047 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.4013 ms
17-02-28 20:19:54.499 -08 000000082 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.9031 ms
17-02-28 20:19:54.500 -08 000000047 INF: ======================================
17-02-28 20:19:54.500 -08 000000082 INF: ======================================
17-02-28 20:19:54.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.502 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:54.503 -08 000000086 INF: ===================Serial===================
17-02-28 20:19:54.503 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:54.504 -08 000000069 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:19:54.504 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:54.504 -08 000000108 INF: ===================Camera TDI===================
17-02-28 20:19:54.504 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:54.504 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:54.504 -08 000000086 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:19:54.504 -08 000000086 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:19:54.505 -08 000000090 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:19:54.505 -08 000000090 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:19:54.505 -08 000000108 INF: ===================Camera TDI, Parallel===================
17-02-28 20:19:54.506 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:19:54.507 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:54.507 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.507 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.508 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.508 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.563 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.563 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:54.563 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:54.625 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.625 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:54.657 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.657 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.658 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.658 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:19:54.691 -08 000000069 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:19:54.750 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.750 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:19:54.750 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:54.807 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.807 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.808 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.808 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.812 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:54.812 -08 000000069 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:19:54.812 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:54.937 -08 000000069 INF: Y Motor: Unshifted Position: 5928587
17-02-28 20:19:54.957 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.957 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.958 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:19:54.958 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:19:54.987 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.107 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:55.107 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:55.107 -08 000000010 INF: ===================Camera #0 Frame #1===================
17-02-28 20:19:55.108 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:19:55.108 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:19:55.108 -08 000000075 INF: ===================Camera #2 Frame #1===================
17-02-28 20:19:55.114 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.251 -08 000000069 INF: Y Motor: Unshifted Position: 5881775
17-02-28 20:19:55.262 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:55.262 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:55.262 -08 000000010 INF: ===================Camera #0 Frame #3===================
17-02-28 20:19:55.263 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:19:55.263 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:19:55.263 -08 000000075 INF: ===================Camera #2 Frame #3===================
17-02-28 20:19:55.301 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.421 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:55.421 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:55.421 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:19:55.422 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:19:55.422 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:19:55.422 -08 000000075 INF: ===================Camera #2 Frame #4===================
17-02-28 20:19:55.425 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.561 -08 000000069 INF: Y Motor: Unshifted Position: 5835229
17-02-28 20:19:55.576 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:55.576 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:55.576 -08 000000010 INF: ===================Camera #0 Frame #5===================
17-02-28 20:19:55.577 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:19:55.577 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:19:55.577 -08 000000075 INF: ===================Camera #2 Frame #5===================
17-02-28 20:19:55.611 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.625 -08 000000036 INF: FPGA: Recv ZWAIT 
17-02-28 20:19:55.625 -08 000000036 INF: FPGA: Recv TDIYWAIT
17-02-28 20:19:55.625 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:55.626 -08 000000086 INF: ===================Serial===================
17-02-28 20:19:55.627 -08 000000090 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:19:55.628 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:19:55.628 -08 000000034 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:19:55.628 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:19:55.628 -08 000000086 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:19:55.628 -08 000000034 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:19:55.628 -08 000000034 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:19:55.628 -08 000000034 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:19:55.629 -08 000000034 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:19:55.629 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:19:55.629 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:19:55.629 -08 000000086 INF: ===================Serial===================
17-02-28 20:19:55.631 -08 000000086 INF: ======================================
17-02-28 20:19:55.635 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:19:55.730 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:55.730 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:55.730 -08 000000010 INF: ===================Camera #0 Frame #6===================
17-02-28 20:19:55.731 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:19:55.731 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:19:55.731 -08 000000075 INF: ===================Camera #2 Frame #6===================
17-02-28 20:19:55.733 -08 000000010 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:55.734 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:55.734 -08 000000075 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:19:55.735 -08 000000075 INF: ===================CameraTDI Cleanup===================
17-02-28 20:19:55.740 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:55.759 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:19:55.759 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:19:55.760 -08 000000010 INF: ======================================
17-02-28 20:19:55.784 -08 000000075 INF: Camera #2 ReleaseBuffer
17-02-28 20:19:55.784 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:19:55.785 -08 000000075 INF: ======================================
17-02-28 20:19:55.787 -08 000000108 INF: ===================Camera TDI===================
17-02-28 20:19:55.788 -08 000000108 INF: ======================================
17-02-28 20:19:55.875 -08 000000069 INF: Y Motor: Unshifted Position: 5790758
17-02-28 20:19:55.925 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:56.058 -08 000000058 INF: FPGA: Recv EX2MV
17-02-28 20:19:56.058 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:19:56.058 -08 000000034 INF: Excitation Filter 2: Moved 107 steps in 429.4201 ms
17-02-28 20:19:56.058 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 429.2714 ms
17-02-28 20:19:56.058 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 429.79 ms
17-02-28 20:19:56.058 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 429.8709 ms
17-02-28 20:19:56.058 -08 000000034 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 429.582 ms
17-02-28 20:19:56.058 -08 000000034 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 429.9683 ms
17-02-28 20:19:56.059 -08 000000050 INF: ======================================
17-02-28 20:19:56.059 -08 000000034 INF: ======================================
17-02-28 20:19:56.060 -08 000000069 INF: Y Motor: Unshifted Position: 5790744
17-02-28 20:19:56.060 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:56.060 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:56.060 -08 000000090 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:19:56.061 -08 000000090 INF: ======================================
17-02-28 20:19:56.125 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:56.125 -08 000000069 INF: Y Motor: Moved to 62.9074 after 1313 ms
17-02-28 20:19:56.125 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:56.187 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:19:56.187 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:56.187 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:56.249 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:56.249 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:56.249 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:56.314 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:56.376 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:56.436 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:56.436 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:56.436 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:56.498 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:19:56.498 -08 000000069 INF: ======================================
17-02-28 20:19:56.499 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:56.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:19:56.501 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.502 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:19:56.559 -08 000000066 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:19:56.559 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:19:56.608 -08 000000025 INF: RunCopyService queue size at 2/28/2017 8:19:56 PM is 4
17-02-28 20:19:56.625 -08 000000078 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:19:56.626 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:19:56.685 -08 000000087 INF: FPGA: Recv ZADCR 2425
17-02-28 20:19:56.685 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:19:56.685 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:19:56.747 -08 000000057 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:19:56.747 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:19:56.747 -08 000000018 INF: TDIScan finished after 6903.8583 ms
17-02-28 20:19:56.747 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:56.747 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:19:56.748 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:19:56.810 -08 000000073 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:19:56.811 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.811 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.812 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:19:56.812 -08 000000078 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:19:56.812 -08 000000077 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:19:56.813 -08 000000087 INF: ======================================
17-02-28 20:19:56.813 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:19:56.813 -08 000000078 INF: ======================================
17-02-28 20:19:56.813 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:19:56.873 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:19:56.873 -08 000000077 INF: ======================================
17-02-28 20:19:56.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.876 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:19:56.920 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:19:56.969 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:56.969 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:19:57.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:57.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:19:57.049 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:19:57.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.050 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:19:57.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:19:57.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:19:57.686 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:19:57.709 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0523143805926639Best Z position at top surface = -0.124095667824279Best Z position at top surface + compensator offset = -0.101395667824279 C:3,L:6,B
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.124095667824279
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.74112
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0523143805926639
17-02-28 20:19:57.711 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.39543
17-02-28 20:19:57.711 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0523143805926639.
17-02-28 20:19:57.711 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.846 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:19:57.846 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:19:57.869 -08 000000060 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:57.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:19:57.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.871 -08 000000018 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:19:57.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.873 -08 000000072 INF: ===================Move Tilt Motor 1===================
17-02-28 20:19:57.873 -08 000000036 INF: ===================Move Tilt Motor 3===================
17-02-28 20:19:57.873 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:19:57.873 -08 000000072 INF: ======================================
17-02-28 20:19:57.873 -08 000000058 INF: ======================================
17-02-28 20:19:57.873 -08 000000036 INF: ======================================
17-02-28 20:19:57.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.875 -08 000000018 INF: ETF Best Z: -0.05231438 mm (13714 DAC)
17-02-28 20:19:57.875 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.876 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.876 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:19:57.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:19:57.883 -08 000000018 INF: Swath 1 position calculated to be: {X=19.39233, Y=39.70494} from estimated center X= 19.887, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:57.883 -08 000000018 INF: Swath 2 position calculated to be: {X=20.50033, Y=39.70494} from estimated center X= 19.887, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:19:58.278 -08 000000018 INF: Swath 0: Converted transform from (98.76729, -20.16876) pixels to (0.034155, -0.0069) mm.
17-02-28 20:19:58.284 -08 000000018 INF: Swath 1: Converted transform from (73.66492, -15.52068) pixels to (0.02553, -0.00552) mm.
17-02-28 20:19:58.285 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:19:58.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:19:58.286 -08 000000018 INF: Transformed XStagePosition from 19.39233 mm to 19.4264889843762 mm.
17-02-28 20:19:58.298 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4880457398258 mm.
17-02-28 20:19:58.298 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2880457398258 mm.
17-02-28 20:19:58.298 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3787957398258 mm.
17-02-28 20:19:58.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:58.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:19:58.301 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:19:58.301 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:19:58.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:58.307 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:19:58.308 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:19:58.308 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:19:58.308 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:58.309 -08 000000052 INF: ===================Move X,Y, Parallel===================
17-02-28 20:19:58.309 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:58.309 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:58.309 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:19:58.309 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:58.309 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:58.310 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:19:58.310 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:19:58.310 -08 000000060 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:19:58.310 -08 000000060 INF: Z Motor: Moving to -0.0723 mm, started at -0.0100 mm
17-02-28 20:19:58.310 -08 000000039 INF: Y Motor: Moving to 64.4880 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:19:58.310 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:58.310 -08 000000060 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:19:58.310 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:58.310 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:19:58.310 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:58.310 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:19:58.310 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:19:58.311 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:19:58.311 -08 000000082 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:19:58.311 -08 000000025 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:19:58.311 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:19:58.311 -08 000000064 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000025 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:19:58.311 -08 000000075 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:19:58.311 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:19:58.312 -08 000000047 INF: ======================================
17-02-28 20:19:58.312 -08 000000086 INF: ======================================
17-02-28 20:19:58.312 -08 000000064 INF: ======================================
17-02-28 20:19:58.312 -08 000000077 INF: ======================================
17-02-28 20:19:58.312 -08 000000030 INF: ======================================
17-02-28 20:19:58.313 -08 000000075 INF: ======================================
17-02-28 20:19:58.313 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:19:58.313 -08 000000072 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:19:58.314 -08 000000058 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:19:58.314 -08 000000082 INF: ======================================
17-02-28 20:19:58.314 -08 000000036 INF: ======================================
17-02-28 20:19:58.314 -08 000000025 INF: ======================================
17-02-28 20:19:58.315 -08 000000072 INF: ======================================
17-02-28 20:19:58.315 -08 000000058 INF: ======================================
17-02-28 20:19:58.315 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:19:58.317 -08 000000034 INF: ======================================
17-02-28 20:19:58.318 -08 000000066 INF: ======================================
17-02-28 20:19:58.384 -08 000000034 INF: FPGA: Recv ZTRG 
17-02-28 20:19:58.384 -08 000000060 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:19:58.386 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:19:58.386 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.386 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:19:58.386 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:19:58.386 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:58.448 -08 000000089 INF: FPGA: Recv ZYT 
17-02-28 20:19:58.448 -08 000000060 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:19:58.448 -08 000000060 INF: FPGA: Xmit ZMV 18956\n
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Moving to 19.4265 mm @15.000 mm/sec, started at 19.9644 mm
17-02-28 20:19:58.450 -08 000000051 INF: X Motor: Xmit MA -16209\n
17-02-28 20:19:58.452 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.452 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:58.510 -08 000000034 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:19:58.510 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:19:58.512 -08 000000051 INF: X Motor: Recv MA -16209\r\n>
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:58.512 -08 000000051 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Set target position to 5948805 encoder counts
17-02-28 20:19:58.512 -08 000000039 INF: Y Motor: Xmit s r0xca 5948805\r
17-02-28 20:19:58.571 -08 000000047 INF: FPGA: Recv ZMV 
17-02-28 20:19:58.571 -08 000000060 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.2301 ms
17-02-28 20:19:58.571 -08 000000060 INF: FPGA: Xmit ZDACR\n
17-02-28 20:19:58.573 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.573 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:19:58.573 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:19:58.633 -08 000000082 INF: FPGA: Recv ZDACR 18956
17-02-28 20:19:58.633 -08 000000060 INF: Z Motor: MoveAndTrigger took 323.088 ms w/comms
17-02-28 20:19:58.633 -08 000000060 INF: Z Motor: After move to -0.0723, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:19:58.633 -08 000000060 INF: Z Motor: MoveAbsStepped took 323.2983 ms
17-02-28 20:19:58.634 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:19:58.635 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:19:58.636 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:58.636 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.636 -08 000000039 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:19:58.636 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:58.636 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:19:58.636 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.637 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:58.637 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:58.638 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:58.638 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:19:58.638 -08 000000064 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:19:58.698 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:19:58.699 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:58.699 -08 000000064 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:19:58.759 -08 000000047 INF: FPGA: Recv TDIBB
17-02-28 20:19:58.759 -08 000000064 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:19:58.760 -08 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:19:58.761 -08 000000039 INF: Y Motor: Unshifted Position: 5875930
17-02-28 20:19:58.761 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.762 -08 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:19:58.763 -08 000000064 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:19:58.763 -08 000000064 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:19:58.811 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:58.821 -08 000000082 INF: FPGA: Recv ZSTEP 
17-02-28 20:19:58.821 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.823 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:19:58.823 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.825 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:19:58.825 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:19:58.825 -08 000000064 INF: Z Motor: Arming to move to -0.0323 mm
17-02-28 20:19:58.825 -08 000000064 INF: FPGA: Xmit ZYT 6428805 4\n
17-02-28 20:19:58.885 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:19:58.885 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6375930 enc / 63.759 mm / ) = 6428805 enc / 64.288 mm
17-02-28 20:19:58.885 -08 000000064 INF: FPGA: Xmit ZARM 8471\n
17-02-28 20:19:58.937 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:19:58.948 -08 000000047 INF: FPGA: Recv ZARM
17-02-28 20:19:58.948 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.8285 ms
17-02-28 20:19:58.948 -08 000000064 INF: Z Motor: ArmAbsStepped took 122.6891 ms
17-02-28 20:19:58.948 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:19:58.949 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:19:58.949 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.951 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:19:58.951 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.953 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:19:58.953 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:19:58.954 -08 000000064 INF: ======================================
17-02-28 20:19:59.011 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:19:59.011 -08 000000051 INF: X Motor: Moved to 19.4272 after 499 ms
17-02-28 20:19:59.011 -08 000000051 INF: ======================================
17-02-28 20:19:59.072 -08 000000039 INF: Y Motor: Unshifted Position: 5948807
17-02-28 20:19:59.072 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:19:59.072 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:59.137 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:59.137 -08 000000039 INF: Y Motor: Moved to 64.4881 after 501 ms
17-02-28 20:19:59.137 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:19:59.198 -08 000000039 INF: Y Motor: Recv v 4096\r
17-02-28 20:19:59.198 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:19:59.198 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:19:59.260 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:59.260 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:19:59.260 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: Recv v 402653184\r
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:19:59.322 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:19:59.386 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:19:59.448 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:59.448 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:19:59.448 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:19:59.509 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:19:59.509 -08 000000039 INF: ======================================
17-02-28 20:19:59.510 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:19:59.511 -08 000000052 INF: ======================================
17-02-28 20:19:59.587 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:19:59.587 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:19:59.587 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:19:59.602 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:19:59.604 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:00.608 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:00.608 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:00.608 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:00.624 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:00.626 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:20:00.627 -08 000000058 INF: ======================================
17-02-28 20:20:00.628 -08 000000060 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:00.629 -08 000000060 INF: ======================================
17-02-28 20:20:00.630 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:00.631 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:00.631 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:00.631 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:00.696 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:00.696 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:00.757 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:00.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:00.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:00.758 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:00.817 -08 000000089 INF: FPGA: Recv TDIYERD 6448806
17-02-28 20:20:00.817 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448806 counts (64.488 mm)
17-02-28 20:20:00.817 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:00.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:00.818 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:00.818 -08 000000030 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:00.819 -08 000000030 INF: ======================================
17-02-28 20:20:00.819 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:00.820 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:00.820 -08 000000073 INF: FPGA: Xmit TDIYPOS 6337880\n
17-02-28 20:20:00.879 -08 000000033 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:00.879 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:00.880 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:00.880 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6428805 1 1\n
17-02-28 20:20:00.943 -08 000000051 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:00.943 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:00.944 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:00.945 -08 000000073 INF: ======================================
17-02-28 20:20:00.946 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:00.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:00.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:00.947 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:00.948 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:00.949 -08 000000057 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:00.949 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:00.949 -08 000000057 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:00.949 -08 000000057 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:00.949 -08 000000057 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:00.949 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:00.949 -08 000000057 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:00.949 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:00.949 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:00.950 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:01.317 -08 000000109 INF: FPGA: Recv EX2MV
17-02-28 20:20:01.317 -08 000000109 INF: FPGA: Recv EX1MV
17-02-28 20:20:01.317 -08 000000057 INF: Excitation Filter 2: Moved -107 steps in 367.7552 ms
17-02-28 20:20:01.317 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 367.6465 ms
17-02-28 20:20:01.317 -08 000000057 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.8571 ms
17-02-28 20:20:01.317 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.7997 ms
17-02-28 20:20:01.317 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.916 ms
17-02-28 20:20:01.317 -08 000000057 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9617 ms
17-02-28 20:20:01.317 -08 000000050 INF: ======================================
17-02-28 20:20:01.317 -08 000000057 INF: ======================================
17-02-28 20:20:01.318 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:01.319 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:01.320 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:20:01.320 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:01.320 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:20:01.320 -08 000000060 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:01.321 -08 000000060 INF: Y Motor: Moving to 14.8397 mm @6.500 mm/sec, started at 64.4881 mm
17-02-28 20:20:01.321 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:01.321 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:01.321 -08 000000082 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:01.321 -08 000000089 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:01.321 -08 000000089 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:01.322 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:20:01.322 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:20:01.324 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.324 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.324 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.324 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.324 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:01.383 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.383 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:01.383 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:01.445 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.445 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:01.474 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.474 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.474 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.474 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Set target position to 983971 encoder counts
17-02-28 20:20:01.508 -08 000000060 INF: Y Motor: Xmit s r0xca 983971\r
17-02-28 20:20:01.568 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.568 -08 000000060 INF: Y Motor: Start the move command
17-02-28 20:20:01.568 -08 000000060 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:01.624 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.624 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.624 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:01.624 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:01.630 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:01.630 -08 000000060 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:01.630 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:01.692 -08 000000069 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:01.692 -08 000000039 INF: ======================================
17-02-28 20:20:01.756 -08 000000060 INF: Y Motor: Unshifted Position: 5885647
17-02-28 20:20:01.774 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:01.774 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:01.774 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:01.774 -08 000000038 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:01.774 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:01.774 -08 000000033 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:01.806 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:01.932 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:01.940 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:01.940 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:01.940 -08 000000033 INF: ===================Camera #2 Frame #11===================
17-02-28 20:20:01.941 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:01.941 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:01.941 -08 000000038 INF: ===================Camera #0 Frame #11===================
17-02-28 20:20:02.067 -08 000000060 INF: Y Motor: Unshifted Position: 5683286
17-02-28 20:20:02.109 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:02.109 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:02.109 -08 000000033 INF: ===================Camera #2 Frame #17===================
17-02-28 20:20:02.113 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:02.113 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:02.113 -08 000000038 INF: ===================Camera #0 Frame #17===================
17-02-28 20:20:02.117 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.243 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.278 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:02.278 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:02.278 -08 000000033 INF: ===================Camera #2 Frame #23===================
17-02-28 20:20:02.284 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:02.284 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:02.284 -08 000000038 INF: ===================Camera #0 Frame #23===================
17-02-28 20:20:02.379 -08 000000060 INF: Y Motor: Unshifted Position: 5480491
17-02-28 20:20:02.429 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.449 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:20:02.449 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:20:02.449 -08 000000033 INF: ===================Camera #2 Frame #29===================
17-02-28 20:20:02.454 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:20:02.454 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:20:02.454 -08 000000038 INF: ===================Camera #0 Frame #30===================
17-02-28 20:20:02.555 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.620 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:02.620 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:02.620 -08 000000033 INF: ===================Camera #2 Frame #36===================
17-02-28 20:20:02.627 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:02.627 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:02.627 -08 000000038 INF: ===================Camera #0 Frame #36===================
17-02-28 20:20:02.693 -08 000000060 INF: Y Motor: Unshifted Position: 5276172
17-02-28 20:20:02.743 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.794 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:02.794 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:02.794 -08 000000033 INF: ===================Camera #2 Frame #42===================
17-02-28 20:20:02.797 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:02.797 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:02.797 -08 000000038 INF: ===================Camera #0 Frame #42===================
17-02-28 20:20:02.866 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:02.965 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:02.965 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:02.965 -08 000000033 INF: ===================Camera #2 Frame #48===================
17-02-28 20:20:02.967 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:02.967 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:02.967 -08 000000038 INF: ===================Camera #0 Frame #48===================
17-02-28 20:20:03.004 -08 000000060 INF: Y Motor: Unshifted Position: 5074020
17-02-28 20:20:03.054 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.136 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:03.136 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:03.136 -08 000000033 INF: ===================Camera #2 Frame #55===================
17-02-28 20:20:03.137 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:03.137 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:03.137 -08 000000038 INF: ===================Camera #0 Frame #55===================
17-02-28 20:20:03.180 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.310 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:03.310 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:03.310 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:03.310 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:03.310 -08 000000033 INF: ===================Camera #2 Frame #61===================
17-02-28 20:20:03.310 -08 000000038 INF: ===================Camera #0 Frame #61===================
17-02-28 20:20:03.315 -08 000000060 INF: Y Motor: Unshifted Position: 4871651
17-02-28 20:20:03.365 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.480 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:03.480 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:03.480 -08 000000038 INF: ===================Camera #0 Frame #67===================
17-02-28 20:20:03.481 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:03.481 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:03.481 -08 000000033 INF: ===================Camera #2 Frame #67===================
17-02-28 20:20:03.492 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.629 -08 000000060 INF: Y Motor: Unshifted Position: 4668637
17-02-28 20:20:03.650 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:20:03.650 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:20:03.650 -08 000000038 INF: ===================Camera #0 Frame #74===================
17-02-28 20:20:03.652 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:20:03.652 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:20:03.652 -08 000000033 INF: ===================Camera #2 Frame #74===================
17-02-28 20:20:03.679 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.803 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.824 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:20:03.824 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:20:03.824 -08 000000038 INF: ===================Camera #0 Frame #80===================
17-02-28 20:20:03.826 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:20:03.826 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:20:03.826 -08 000000033 INF: ===================Camera #2 Frame #80===================
17-02-28 20:20:03.941 -08 000000060 INF: Y Motor: Unshifted Position: 4464526
17-02-28 20:20:03.991 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:03.994 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:03.994 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:03.994 -08 000000038 INF: ===================Camera #0 Frame #86===================
17-02-28 20:20:03.997 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:03.997 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:03.997 -08 000000033 INF: ===================Camera #2 Frame #86===================
17-02-28 20:20:04.114 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.164 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:20:04.164 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:20:04.164 -08 000000038 INF: ===================Camera #0 Frame #93===================
17-02-28 20:20:04.168 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:20:04.168 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:20:04.168 -08 000000033 INF: ===================Camera #2 Frame #93===================
17-02-28 20:20:04.252 -08 000000060 INF: Y Motor: Unshifted Position: 4262384
17-02-28 20:20:04.302 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.335 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:20:04.335 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:20:04.335 -08 000000038 INF: ===================Camera #0 Frame #99===================
17-02-28 20:20:04.340 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:20:04.340 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:20:04.340 -08 000000033 INF: ===================Camera #2 Frame #99===================
17-02-28 20:20:04.428 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.503 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:20:04.503 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:20:04.503 -08 000000038 INF: ===================Camera #0 Frame #105===================
17-02-28 20:20:04.509 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:20:04.509 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:20:04.509 -08 000000033 INF: ===================Camera #2 Frame #105===================
17-02-28 20:20:04.563 -08 000000060 INF: Y Motor: Unshifted Position: 4060003
17-02-28 20:20:04.613 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.672 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:04.672 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:04.672 -08 000000038 INF: ===================Camera #0 Frame #111===================
17-02-28 20:20:04.678 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:04.678 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:04.678 -08 000000033 INF: ===================Camera #2 Frame #111===================
17-02-28 20:20:04.739 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:04.841 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:20:04.841 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:20:04.841 -08 000000038 INF: ===================Camera #0 Frame #117===================
17-02-28 20:20:04.847 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:20:04.847 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:20:04.847 -08 000000033 INF: ===================Camera #2 Frame #118===================
17-02-28 20:20:04.877 -08 000000060 INF: Y Motor: Unshifted Position: 3857856
17-02-28 20:20:04.927 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.010 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:20:05.010 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:20:05.010 -08 000000038 INF: ===================Camera #0 Frame #124===================
17-02-28 20:20:05.020 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:20:05.020 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:20:05.020 -08 000000033 INF: ===================Camera #2 Frame #124===================
17-02-28 20:20:05.050 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.182 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:20:05.182 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:20:05.182 -08 000000038 INF: ===================Camera #0 Frame #130===================
17-02-28 20:20:05.188 -08 000000060 INF: Y Motor: Unshifted Position: 3653540
17-02-28 20:20:05.189 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:20:05.189 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:20:05.189 -08 000000033 INF: ===================Camera #2 Frame #130===================
17-02-28 20:20:05.238 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.350 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:20:05.350 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:20:05.350 -08 000000038 INF: ===================Camera #0 Frame #136===================
17-02-28 20:20:05.358 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:20:05.358 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:20:05.358 -08 000000033 INF: ===================Camera #2 Frame #137===================
17-02-28 20:20:05.364 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.500 -08 000000060 INF: Y Motor: Unshifted Position: 3450737
17-02-28 20:20:05.519 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:20:05.519 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:20:05.519 -08 000000038 INF: ===================Camera #0 Frame #142===================
17-02-28 20:20:05.530 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:20:05.530 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:20:05.530 -08 000000033 INF: ===================Camera #2 Frame #143===================
17-02-28 20:20:05.550 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.676 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.687 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:20:05.687 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:20:05.687 -08 000000038 INF: ===================Camera #0 Frame #149===================
17-02-28 20:20:05.699 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:20:05.699 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:20:05.699 -08 000000033 INF: ===================Camera #2 Frame #149===================
17-02-28 20:20:05.811 -08 000000060 INF: Y Motor: Unshifted Position: 3248373
17-02-28 20:20:05.859 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:20:05.859 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:20:05.859 -08 000000038 INF: ===================Camera #0 Frame #155===================
17-02-28 20:20:05.861 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:05.869 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:20:05.869 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:20:05.869 -08 000000033 INF: ===================Camera #2 Frame #155===================
17-02-28 20:20:05.987 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.028 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:20:06.028 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:20:06.028 -08 000000038 INF: ===================Camera #0 Frame #161===================
17-02-28 20:20:06.039 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:20:06.039 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:20:06.039 -08 000000033 INF: ===================Camera #2 Frame #162===================
17-02-28 20:20:06.125 -08 000000060 INF: Y Motor: Unshifted Position: 3044930
17-02-28 20:20:06.175 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.197 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:20:06.197 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:20:06.197 -08 000000038 INF: ===================Camera #0 Frame #167===================
17-02-28 20:20:06.212 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:20:06.212 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:20:06.212 -08 000000033 INF: ===================Camera #2 Frame #168===================
17-02-28 20:20:06.299 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.367 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:20:06.367 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:20:06.367 -08 000000038 INF: ===================Camera #0 Frame #174===================
17-02-28 20:20:06.383 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:20:06.383 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:20:06.383 -08 000000033 INF: ===================Camera #2 Frame #174===================
17-02-28 20:20:06.439 -08 000000060 INF: Y Motor: Unshifted Position: 2843216
17-02-28 20:20:06.489 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.539 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:20:06.539 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:20:06.539 -08 000000038 INF: ===================Camera #0 Frame #180===================
17-02-28 20:20:06.553 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:20:06.553 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:20:06.553 -08 000000033 INF: ===================Camera #2 Frame #180===================
17-02-28 20:20:06.611 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.708 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:20:06.708 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:20:06.708 -08 000000038 INF: ===================Camera #0 Frame #186===================
17-02-28 20:20:06.723 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:20:06.723 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:20:06.723 -08 000000033 INF: ===================Camera #2 Frame #187===================
17-02-28 20:20:06.749 -08 000000060 INF: Y Motor: Unshifted Position: 2639112
17-02-28 20:20:06.799 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:06.877 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:20:06.877 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:20:06.877 -08 000000038 INF: ===================Camera #0 Frame #192===================
17-02-28 20:20:06.897 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:20:06.897 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:20:06.897 -08 000000033 INF: ===================Camera #2 Frame #193===================
17-02-28 20:20:06.925 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.047 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:20:07.047 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:20:07.047 -08 000000038 INF: ===================Camera #0 Frame #199===================
17-02-28 20:20:07.060 -08 000000060 INF: Y Motor: Unshifted Position: 2436759
17-02-28 20:20:07.067 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:20:07.067 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:20:07.067 -08 000000033 INF: ===================Camera #2 Frame #199===================
17-02-28 20:20:07.110 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.220 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:20:07.220 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:20:07.220 -08 000000038 INF: ===================Camera #0 Frame #205===================
17-02-28 20:20:07.237 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.237 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:20:07.237 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:20:07.237 -08 000000033 INF: ===================Camera #2 Frame #206===================
17-02-28 20:20:07.374 -08 000000060 INF: Y Motor: Unshifted Position: 2234601
17-02-28 20:20:07.390 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:20:07.390 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:20:07.390 -08 000000038 INF: ===================Camera #0 Frame #211===================
17-02-28 20:20:07.410 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:20:07.410 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:20:07.410 -08 000000033 INF: ===================Camera #2 Frame #212===================
17-02-28 20:20:07.424 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.548 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.560 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:20:07.560 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:20:07.560 -08 000000038 INF: ===================Camera #0 Frame #218===================
17-02-28 20:20:07.580 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:20:07.580 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:20:07.580 -08 000000033 INF: ===================Camera #2 Frame #218===================
17-02-28 20:20:07.686 -08 000000060 INF: Y Motor: Unshifted Position: 2031584
17-02-28 20:20:07.733 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:20:07.733 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:20:07.733 -08 000000038 INF: ===================Camera #0 Frame #224===================
17-02-28 20:20:07.736 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.751 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:20:07.751 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:20:07.751 -08 000000033 INF: ===================Camera #2 Frame #225===================
17-02-28 20:20:07.859 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:07.903 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:20:07.903 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:20:07.903 -08 000000038 INF: ===================Camera #0 Frame #230===================
17-02-28 20:20:07.925 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:20:07.925 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:20:07.925 -08 000000033 INF: ===================Camera #2 Frame #231===================
17-02-28 20:20:07.997 -08 000000060 INF: Y Motor: Unshifted Position: 1827481
17-02-28 20:20:08.047 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.073 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:20:08.073 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:20:08.073 -08 000000038 INF: ===================Camera #0 Frame #236===================
17-02-28 20:20:08.096 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:20:08.096 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:20:08.096 -08 000000033 INF: ===================Camera #2 Frame #237===================
17-02-28 20:20:08.170 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.243 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:20:08.243 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:20:08.243 -08 000000038 INF: ===================Camera #0 Frame #243===================
17-02-28 20:20:08.266 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:20:08.266 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:20:08.266 -08 000000033 INF: ===================Camera #2 Frame #244===================
17-02-28 20:20:08.308 -08 000000060 INF: Y Motor: Unshifted Position: 1624902
17-02-28 20:20:08.358 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.416 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:20:08.416 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:20:08.416 -08 000000038 INF: ===================Camera #0 Frame #249===================
17-02-28 20:20:08.440 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:20:08.440 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:20:08.440 -08 000000033 INF: ===================Camera #2 Frame #250===================
17-02-28 20:20:08.482 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.586 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:20:08.586 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:20:08.586 -08 000000038 INF: ===================Camera #0 Frame #255===================
17-02-28 20:20:08.610 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:20:08.610 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:20:08.610 -08 000000033 INF: ===================Camera #2 Frame #256===================
17-02-28 20:20:08.620 -08 000000060 INF: Y Motor: Unshifted Position: 1422097
17-02-28 20:20:08.670 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.756 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:20:08.756 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:20:08.756 -08 000000038 INF: ===================Camera #0 Frame #262===================
17-02-28 20:20:08.780 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:20:08.780 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:20:08.780 -08 000000033 INF: ===================Camera #2 Frame #262===================
17-02-28 20:20:08.796 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:08.929 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:20:08.929 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:20:08.929 -08 000000038 INF: ===================Camera #0 Frame #268===================
17-02-28 20:20:08.934 -08 000000060 INF: Y Motor: Unshifted Position: 1219939
17-02-28 20:20:08.950 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:20:08.950 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:20:08.950 -08 000000033 INF: ===================Camera #2 Frame #269===================
17-02-28 20:20:08.984 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:09.055 -08 000000039 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:09.055 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:09.057 -08 000000089 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:09.058 -08 000000109 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:09.058 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:09.058 -08 000000109 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:09.058 -08 000000109 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:09.058 -08 000000109 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:09.058 -08 000000109 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:09.058 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:09.058 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:09.058 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:09.059 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:09.099 -08 000000038 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:09.099 -08 000000038 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:09.099 -08 000000038 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:09.107 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:09.112 -08 000000038 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:09.113 -08 000000038 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:09.245 -08 000000060 INF: Y Motor: Unshifted Position: 1015626
17-02-28 20:20:09.277 -08 000000038 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:09.277 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:09.277 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:09.277 -08 000000033 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:09.277 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:20:09.286 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:09.287 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:09.295 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:09.310 -08 000000038 INF: ======================================
17-02-28 20:20:09.429 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:20:09.429 -08 000000078 INF: FPGA: Recv EX2MV
17-02-28 20:20:09.429 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 370.6057 ms
17-02-28 20:20:09.429 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.7201 ms
17-02-28 20:20:09.429 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.8243 ms
17-02-28 20:20:09.429 -08 000000109 INF: Excitation Filter 1: Moved 107 steps in 370.8338 ms
17-02-28 20:20:09.429 -08 000000109 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.041 ms
17-02-28 20:20:09.429 -08 000000109 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1649 ms
17-02-28 20:20:09.429 -08 000000058 INF: ======================================
17-02-28 20:20:09.429 -08 000000109 INF: ======================================
17-02-28 20:20:09.431 -08 000000060 INF: Y Motor: Unshifted Position: 983971
17-02-28 20:20:09.431 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:09.431 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:09.431 -08 000000089 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:09.432 -08 000000089 INF: ======================================
17-02-28 20:20:09.484 -08 000000033 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:09.484 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:20:09.495 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:09.495 -08 000000060 INF: Y Motor: Moved to 14.8397 after 7864 ms
17-02-28 20:20:09.495 -08 000000060 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:09.519 -08 000000033 INF: ======================================
17-02-28 20:20:09.520 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:20:09.521 -08 000000082 INF: ======================================
17-02-28 20:20:09.557 -08 000000060 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:09.557 -08 000000060 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:09.557 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:09.619 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:09.619 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:09.619 -08 000000060 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:09.680 -08 000000060 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:09.745 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:09.806 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:09.806 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:09.806 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:09.870 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:20:09.870 -08 000000060 INF: ======================================
17-02-28 20:20:09.871 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:09.872 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:09.873 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:09.873 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:09.928 -08 000000050 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:09.928 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:09.992 -08 000000010 INF: FPGA: Recv TDIYERD 1483972
17-02-28 20:20:09.992 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:10.054 -08 000000085 INF: FPGA: Recv ZADCR 18321
17-02-28 20:20:10.054 -08 000000018 INF: At scan end Y pos = 14.840 and Z pos = -0.070. Y moved -48.539 mm
17-02-28 20:20:10.054 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:10.116 -08 000000078 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:10.116 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:10.116 -08 000000018 INF: TDIScan finished after 11829.5274 ms
17-02-28 20:20:10.116 -08 000000018 INF: Image[0]: Y should trigger at 63.379 mm, 2nd row was at 64.288 mm (error = 0.909 mm)
17-02-28 20:20:10.116 -08 000000018 INF: Image[2]: Y should trigger at 63.379 mm, 2nd row was at 64.288 mm (error = 0.909 mm)
17-02-28 20:20:10.118 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.152 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.825 um
17-02-28 20:20:10.152 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.153 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:10.180 -08 000000047 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:10.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.181 -08 000000069 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:10.181 -08 000000025 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:10.181 -08 000000101 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:10.181 -08 000000064 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:10.182 -08 000000025 INF: ======================================
17-02-28 20:20:10.182 -08 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:10.182 -08 000000064 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:10.182 -08 000000101 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:10.182 -08 000000101 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:10.182 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:10.182 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:10.183 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:10.185 -08 000000089 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:10.210 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:10.211 -08 000000089 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:10.212 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.212 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.212 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.212 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.212 -08 000000057 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:10.242 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:10.242 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:20:10.242 -08 000000073 INF: FPGA: Xmit ZDACW 18956\n
17-02-28 20:20:10.242 -08 000000064 INF: ======================================
17-02-28 20:20:10.244 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.244 -08 000000101 INF: ======================================
17-02-28 20:20:10.286 -08 000000033 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.286 -08 000000039 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.286 -08 000000058 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.287 -08 000000057 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:10.303 -08 000000087 INF: FPGA: Recv ZDACW 
17-02-28 20:20:10.303 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:10.304 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:10.365 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:20:10.365 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:10.366 -08 000000073 INF: ======================================
17-02-28 20:20:10.437 -08 000000033 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:20:10.438 -08 000000033 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0523143805926639 in the next cycle, cycle 4 FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000058 INF: LFT found best fwhm score 2.000112 in 151 ms
17-02-28 20:20:10.438 -08 000000058 INF: LFT found good score at index 3645 with fwhm value 2.000112. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000039 INF: LFT found best fwhm score 2.000099 in 152 ms
17-02-28 20:20:10.438 -08 000000039 INF: LFT found good score at index 5121 with fwhm value 2.000099. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000057 INF: LFT found best fwhm score 2.026447 in 151 ms
17-02-28 20:20:10.438 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000057 INF: LFT found good score at index 7325 with fwhm value 2.026447. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:10.438 -08 000000058 INF: ======================================
17-02-28 20:20:10.438 -08 000000033 INF: ======================================
17-02-28 20:20:10.438 -08 000000057 INF: ===================LookupFocusTracking===================
17-02-28 20:20:10.438 -08 000000039 INF: ======================================
17-02-28 20:20:10.439 -08 000000057 INF: ======================================
17-02-28 20:20:10.440 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:10.441 -08 000000089 INF: LFT weighted average best Z for bottom surface is at -0.052mm FC:A, C:3,L:6,B
17-02-28 20:20:10.441 -08 000000089 INF: ======================================
17-02-28 20:20:10.442 -08 000000069 INF: ======================================
17-02-28 20:20:10.443 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:20:10.445 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 19.39233 Y = 39.70494===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:20:10.446 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:20:10.469 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:20:10.469 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:10.470 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:10.470 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.470 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:10.470 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:10.470 -08 000000018 INF: Transformed XStagePosition from 20.50033 mm to 20.5258637852967 mm.
17-02-28 20:20:10.483 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4894257396236 mm.
17-02-28 20:20:10.483 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2894257396236 mm.
17-02-28 20:20:10.483 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3801757396236 mm.
17-02-28 20:20:10.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:10.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:10.486 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -72.3 um, section = F_1
17-02-28 20:20:10.519 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:10.520 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:10.521 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:20:10.521 -08 000000081 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:10.522 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:10.522 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:10.523 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:20:10.523 -08 000000057 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:10.523 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:10.524 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:10.524 -08 000000072 INF: ===================Move X Motor without settling===================
17-02-28 20:20:10.525 -08 000000072 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:10.525 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:20:10.525 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:10.527 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:10.528 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:10.529 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:10.529 -08 000000077 INF: Y Motor: Moving to 64.4894 mm @25.000 mm/sec, started at 14.8397 mm
17-02-28 20:20:10.529 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:10.529 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:10.529 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":6,"Tile":2104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF178","HCSMMF184","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.530 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.530 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.531 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:10.531 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:10.532 -08 000000078 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:20:10.532 -08 000000060 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:10.533 -08 000000060 INF: ======================================
17-02-28 20:20:10.535 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:10.535 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:10.547 -08 000000058 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:10.548 -08 000000058 INF: ======================================
17-02-28 20:20:10.550 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:20:10.550 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:10.550 -08 000000109 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:10.551 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:10.551 -08 000000109 INF: ======================================
17-02-28 20:20:10.551 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:10.551 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:10.552 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:10.552 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:10.552 -08 000000075 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:10.553 -08 000000039 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:10.553 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:10.553 -08 000000075 INF: ======================================
17-02-28 20:20:10.553 -08 000000109 INF: ======================================
17-02-28 20:20:10.554 -08 000000035 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:10.554 -08 000000039 INF: ======================================
17-02-28 20:20:10.554 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:10.554 -08 000000038 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:10.555 -08 000000035 INF: ======================================
17-02-28 20:20:10.555 -08 000000038 INF: ======================================
17-02-28 20:20:10.556 -08 000000064 INF: ======================================
17-02-28 20:20:10.561 -08 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:10.562 -08 000000060 INF: ======================================
17-02-28 20:20:10.566 -08 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:10.568 -08 000000086 INF: ======================================
17-02-28 20:20:10.575 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:20:10.577 -08 000000072 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:10.577 -08 000000072 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:10.578 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:10.578 -08 000000078 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:20:10.579 -08 000000010 INF: ======================================
17-02-28 20:20:10.580 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.580 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:10.580 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:10.581 -08 000000081 INF: ======================================
17-02-28 20:20:10.603 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":6,"Tile":2101,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF233","HCSMMF206","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.622 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":6,"Tile":2110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF261","HCSMMF185","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.633 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":6,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF183","HCSMMF252","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.635 -08 000000030 INF: FPGA: Recv TDIBB
17-02-28 20:20:10.635 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":6,"Tile":2109,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF268","HCSMMF176","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.636 -08 000000078 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:10.637 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.637 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:10.637 -08 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Moving to 20.5259 mm @15.000 mm/sec, started at 19.4272 mm
17-02-28 20:20:10.637 -08 000000072 INF: X Motor: Xmit MA -15759\n
17-02-28 20:20:10.637 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.639 -08 000000078 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:20:10.639 -08 000000078 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:20:10.639 -08 000000078 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:20:10.674 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":6,"Tile":2106,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF264","HCSMMF235","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.677 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":6,"Tile":2102,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF250","HCSMMF270","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.678 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":6,"Tile":2108,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF228","HCSMMF280","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.687 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":6,"Tile":2103,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF246","HCSMMF240","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.688 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":6,"Tile":2112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF177","HCSMMF242","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.688 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":6,"Tile":2113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF251","HCSMMF191","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.690 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":6,"Tile":2111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF187","HCSMMF238","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.691 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":6,"Tile":2105,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF205","HCSMMF237","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.692 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":6,"Tile":2115,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF216","HCSMMF274","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.692 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":6,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF284","HCSMMF276","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.694 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:10.694 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":6,"Tile":2114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF236","HCSMMF275","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.694 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.695 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":6,"Tile":2116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF201","HCSMMF267","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:10.696 -08 000000072 INF: X Motor: Recv MA -15759\r\n>
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:10.696 -08 000000072 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:20:10.696 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":6,"Tile":2118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF202","HCSMMF266","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.696 -08 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Set target position to 5948943 encoder counts
17-02-28 20:20:10.696 -08 000000077 INF: Y Motor: Xmit s r0xca 5948943\r
17-02-28 20:20:10.696 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.697 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":6,"Tile":2117,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF254","HCSMMF255","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.698 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":6,"Tile":2121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF287","HCSMMF188","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.698 -08 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:10.698 -08 000000078 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:10.698 -08 000000078 INF: Z Motor: Arming to move to -0.0323 mm
17-02-28 20:20:10.698 -08 000000078 INF: FPGA: Xmit ZYT 6428943 4\n
17-02-28 20:20:10.699 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":6,"Tile":2120,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF247","HCSMMF245","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.699 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":6,"Tile":2122,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF282","HCSMMF241","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.700 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":6,"Tile":2128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF279","HCSMMF215","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.701 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":6,"Tile":2125,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF281","HCSMMF180","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.702 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":6,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF214","HCSMMF258","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.703 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":6,"Tile":2126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF232","HCSMMF182","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.704 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":6,"Tile":2124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF200","HCSMMF223","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.706 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":6,"Tile":2123,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF208","HCSMMF259","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:10.709 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.715 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:10.756 -08 000000060 INF: FPGA: Recv ZYT 
17-02-28 20:20:10.756 -08 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1483971 enc / 14.840 mm / ) = 6428943 enc / 64.289 mm
17-02-28 20:20:10.756 -08 000000078 INF: FPGA: Xmit ZARM 8471\n
17-02-28 20:20:10.758 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.758 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:20:10.758 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:10.809 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.809 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:10.818 -08 000000064 INF: FPGA: Recv ZARM
17-02-28 20:20:10.818 -08 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8895 ms
17-02-28 20:20:10.818 -08 000000078 INF: Z Motor: ArmAbsStepped took 119.6812 ms
17-02-28 20:20:10.818 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:10.820 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:10.820 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.820 -08 000000077 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:20:10.820 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:10.821 -08 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:10.822 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.823 -08 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:10.823 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:20:10.825 -08 000000078 INF: ======================================
17-02-28 20:20:10.845 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.850 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:10.936 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:10.942 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:10.944 -08 000000077 INF: Y Motor: Unshifted Position: 1065524
17-02-28 20:20:10.994 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.048 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:11.054 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:11.124 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.141 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:11.141 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:11.141 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:11.156 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:11.158 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:11.165 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:11.258 -08 000000077 INF: Y Motor: Unshifted Position: 1776473
17-02-28 20:20:11.308 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.320 -08 000000072 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:11.382 -08 000000072 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:11.382 -08 000000072 INF: X Motor: Moved to 20.5259 after 686 ms
17-02-28 20:20:11.382 -08 000000072 INF: ======================================
17-02-28 20:20:11.432 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.474 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:11.570 -08 000000077 INF: Y Motor: Unshifted Position: 2558993
17-02-28 20:20:11.620 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.744 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:11.763 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:11.763 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:11.763 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:11.778 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:11.780 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:20:11.781 -08 000000058 INF: ======================================
17-02-28 20:20:11.782 -08 000000057 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:11.783 -08 000000057 INF: ======================================
17-02-28 20:20:11.880 -08 000000077 INF: Y Motor: Unshifted Position: 3331439
17-02-28 20:20:11.930 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.059 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.196 -08 000000077 INF: Y Motor: Unshifted Position: 4109838
17-02-28 20:20:12.246 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.368 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.504 -08 000000077 INF: Y Motor: Unshifted Position: 4893107
17-02-28 20:20:12.554 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.682 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.818 -08 000000077 INF: Y Motor: Unshifted Position: 5669511
17-02-28 20:20:12.868 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:12.992 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:13.128 -08 000000077 INF: Y Motor: Unshifted Position: 5948945
17-02-28 20:20:13.128 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:13.128 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:13.190 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:13.190 -08 000000077 INF: Y Motor: Moved to 64.4895 after 2369 ms
17-02-28 20:20:13.190 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:13.256 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:13.256 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:13.256 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:13.330 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:13.330 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:13.330 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:13.377 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:13.442 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:13.502 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:13.502 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:13.502 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:13.567 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:20:13.567 -08 000000077 INF: ======================================
17-02-28 20:20:13.569 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:20:13.570 -08 000000069 INF: ======================================
17-02-28 20:20:13.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:13.572 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:13.572 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:13.572 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:13.628 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:13.628 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:13.642 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:13.642 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:13.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:13.643 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:13.703 -08 000000105 INF: FPGA: Recv TDIYERD 6448945
17-02-28 20:20:13.703 -08 000000018 INF: Before scan, Y encoder from FPGA = 6448945 counts (64.489 mm)
17-02-28 20:20:13.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:13.704 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:13.705 -08 000000073 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:13.705 -08 000000064 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:13.705 -08 000000073 INF: ======================================
17-02-28 20:20:13.706 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:13.707 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:13.707 -08 000000064 INF: FPGA: Xmit TDIYPOS 6338018\n
17-02-28 20:20:13.765 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:13.765 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:13.767 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:13.767 -08 000000064 INF: FPGA: Xmit TDIYARM3 139264 6428943 1 1\n
17-02-28 20:20:13.832 -08 000000073 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:13.832 -08 000000064 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:13.833 -08 000000064 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:13.834 -08 000000064 INF: ======================================
17-02-28 20:20:13.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:13.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:13.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:13.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:13.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:13.838 -08 000000058 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:13.838 -08 000000058 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:13.838 -08 000000058 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:13.838 -08 000000058 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:13.839 -08 000000058 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:13.839 -08 000000066 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:13.839 -08 000000066 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:13.839 -08 000000066 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:13.839 -08 000000066 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:13.840 -08 000000066 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:14.203 -08 000000073 INF: FPGA: Recv EX2MV
17-02-28 20:20:14.203 -08 000000073 INF: FPGA: Recv EX1MV
17-02-28 20:20:14.203 -08 000000066 INF: Excitation Filter 1: Moved -107 steps in 363.6737 ms
17-02-28 20:20:14.203 -08 000000066 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 363.9152 ms
17-02-28 20:20:14.203 -08 000000066 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 363.9874 ms
17-02-28 20:20:14.203 -08 000000058 INF: Excitation Filter 2: Moved -107 steps in 364.5208 ms
17-02-28 20:20:14.203 -08 000000058 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 364.95 ms
17-02-28 20:20:14.203 -08 000000058 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.0298 ms
17-02-28 20:20:14.204 -08 000000066 INF: ======================================
17-02-28 20:20:14.204 -08 000000058 INF: ======================================
17-02-28 20:20:14.205 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:14.206 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:14.207 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:14.207 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:14.207 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:14.207 -08 000000045 INF: Y Motor: Moving to 14.8411 mm @6.500 mm/sec, started at 64.4895 mm
17-02-28 20:20:14.208 -08 000000033 INF: ===================FPGA Z Wait===================
17-02-28 20:20:14.208 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:14.208 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:14.208 -08 000000033 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:14.208 -08 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:14.208 -08 000000075 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:14.209 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:20:14.209 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:20:14.211 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.211 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.211 -08 000000064 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:14.211 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.211 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.251 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.251 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:14.251 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:14.313 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.313 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:14.361 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.361 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.361 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.361 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Set target position to 984109 encoder counts
17-02-28 20:20:14.376 -08 000000045 INF: Y Motor: Xmit s r0xca 984109\r
17-02-28 20:20:14.440 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.440 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:20:14.440 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:14.501 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:14.501 -08 000000045 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:14.501 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:14.511 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.511 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.511 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:14.511 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:14.579 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:14.579 -08 000000033 INF: ======================================
17-02-28 20:20:14.627 -08 000000045 INF: Y Motor: Unshifted Position: 5886654
17-02-28 20:20:14.661 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:14.661 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:14.661 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:14.661 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:14.661 -08 000000053 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:14.661 -08 000000047 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:14.677 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:14.801 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:14.831 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:14.831 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:14.831 -08 000000047 INF: ===================Camera #0 Frame #11===================
17-02-28 20:20:14.835 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:20:14.835 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:20:14.835 -08 000000053 INF: ===================Camera #2 Frame #12===================
17-02-28 20:20:14.938 -08 000000045 INF: Y Motor: Unshifted Position: 5684293
17-02-28 20:20:14.988 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.009 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:20:15.009 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:20:15.009 -08 000000047 INF: ===================Camera #0 Frame #18===================
17-02-28 20:20:15.018 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:20:15.018 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:20:15.018 -08 000000053 INF: ===================Camera #2 Frame #18===================
17-02-28 20:20:15.114 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.186 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:20:15.186 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:20:15.186 -08 000000047 INF: ===================Camera #0 Frame #24===================
17-02-28 20:20:15.187 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:20:15.187 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:20:15.187 -08 000000053 INF: ===================Camera #2 Frame #24===================
17-02-28 20:20:15.249 -08 000000045 INF: Y Motor: Unshifted Position: 5482147
17-02-28 20:20:15.299 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.356 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:20:15.356 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:20:15.356 -08 000000053 INF: ===================Camera #2 Frame #31===================
17-02-28 20:20:15.363 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:20:15.363 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:20:15.363 -08 000000047 INF: ===================Camera #0 Frame #31===================
17-02-28 20:20:15.425 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.533 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:15.533 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:20:15.533 -08 000000053 INF: ===================Camera #2 Frame #37===================
17-02-28 20:20:15.541 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:15.541 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:20:15.541 -08 000000047 INF: ===================Camera #0 Frame #38===================
17-02-28 20:20:15.561 -08 000000045 INF: Y Motor: Unshifted Position: 5279124
17-02-28 20:20:15.611 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.711 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:20:15.711 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:20:15.711 -08 000000053 INF: ===================Camera #2 Frame #44===================
17-02-28 20:20:15.722 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:20:15.722 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:20:15.722 -08 000000047 INF: ===================Camera #0 Frame #44===================
17-02-28 20:20:15.737 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:15.875 -08 000000045 INF: Y Motor: Unshifted Position: 5074805
17-02-28 20:20:15.885 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:20:15.885 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:20:15.885 -08 000000053 INF: ===================Camera #2 Frame #50===================
17-02-28 20:20:15.898 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:20:15.898 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:20:15.898 -08 000000047 INF: ===================Camera #0 Frame #51===================
17-02-28 20:20:15.925 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.048 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.058 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:20:16.058 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:20:16.058 -08 000000053 INF: ===================Camera #2 Frame #57===================
17-02-28 20:20:16.080 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:20:16.080 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:20:16.081 -08 000000047 INF: ===================Camera #0 Frame #57===================
17-02-28 20:20:16.186 -08 000000045 INF: Y Motor: Unshifted Position: 4872659
17-02-28 20:20:16.230 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:20:16.230 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:20:16.230 -08 000000053 INF: ===================Camera #2 Frame #63===================
17-02-28 20:20:16.236 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.249 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:20:16.249 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:20:16.249 -08 000000047 INF: ===================Camera #0 Frame #64===================
17-02-28 20:20:16.363 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.410 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:20:16.410 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:20:16.410 -08 000000053 INF: ===================Camera #2 Frame #69===================
17-02-28 20:20:16.426 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:20:16.426 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:20:16.426 -08 000000047 INF: ===================Camera #0 Frame #70===================
17-02-28 20:20:16.498 -08 000000045 INF: Y Motor: Unshifted Position: 4670297
17-02-28 20:20:16.548 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.588 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:20:16.588 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:20:16.588 -08 000000053 INF: ===================Camera #2 Frame #76===================
17-02-28 20:20:16.603 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:20:16.603 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:20:16.603 -08 000000047 INF: ===================Camera #0 Frame #77===================
17-02-28 20:20:16.675 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.771 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:20:16.771 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:20:16.771 -08 000000053 INF: ===================Camera #2 Frame #83===================
17-02-28 20:20:16.785 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:20:16.785 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:20:16.785 -08 000000047 INF: ===================Camera #0 Frame #83===================
17-02-28 20:20:16.810 -08 000000045 INF: Y Motor: Unshifted Position: 4466826
17-02-28 20:20:16.860 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:16.944 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:20:16.944 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:20:16.944 -08 000000053 INF: ===================Camera #2 Frame #89===================
17-02-28 20:20:16.960 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:20:16.960 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:20:16.960 -08 000000047 INF: ===================Camera #0 Frame #90===================
17-02-28 20:20:16.986 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.113 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:20:17.113 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:20:17.113 -08 000000053 INF: ===================Camera #2 Frame #95===================
17-02-28 20:20:17.124 -08 000000045 INF: Y Motor: Unshifted Position: 4263168
17-02-28 20:20:17.132 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:20:17.132 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:20:17.132 -08 000000047 INF: ===================Camera #0 Frame #96===================
17-02-28 20:20:17.174 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.283 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:20:17.283 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:20:17.283 -08 000000053 INF: ===================Camera #2 Frame #102===================
17-02-28 20:20:17.297 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.307 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:20:17.307 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:20:17.307 -08 000000047 INF: ===================Camera #0 Frame #102===================
17-02-28 20:20:17.434 -08 000000045 INF: Y Motor: Unshifted Position: 4061656
17-02-28 20:20:17.456 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:20:17.456 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:20:17.456 -08 000000053 INF: ===================Camera #2 Frame #108===================
17-02-28 20:20:17.475 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:20:17.475 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:20:17.475 -08 000000047 INF: ===================Camera #0 Frame #109===================
17-02-28 20:20:17.484 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.609 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.625 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:20:17.625 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:20:17.625 -08 000000053 INF: ===================Camera #2 Frame #114===================
17-02-28 20:20:17.647 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:20:17.647 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:20:17.647 -08 000000047 INF: ===================Camera #0 Frame #115===================
17-02-28 20:20:17.747 -08 000000045 INF: Y Motor: Unshifted Position: 3857994
17-02-28 20:20:17.794 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:20:17.794 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:20:17.794 -08 000000053 INF: ===================Camera #2 Frame #120===================
17-02-28 20:20:17.797 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.815 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:20:17.815 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:20:17.815 -08 000000047 INF: ===================Camera #0 Frame #121===================
17-02-28 20:20:17.923 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:17.964 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:20:17.964 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:20:17.964 -08 000000053 INF: ===================Camera #2 Frame #127===================
17-02-28 20:20:17.984 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:20:17.984 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:20:17.984 -08 000000047 INF: ===================Camera #0 Frame #127===================
17-02-28 20:20:18.058 -08 000000045 INF: Y Motor: Unshifted Position: 3654544
17-02-28 20:20:18.108 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.136 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:20:18.136 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:20:18.136 -08 000000053 INF: ===================Camera #2 Frame #133===================
17-02-28 20:20:18.152 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:20:18.152 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:20:18.152 -08 000000047 INF: ===================Camera #0 Frame #134===================
17-02-28 20:20:18.234 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.305 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:20:18.305 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:20:18.305 -08 000000053 INF: ===================Camera #2 Frame #139===================
17-02-28 20:20:18.324 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:20:18.324 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:20:18.324 -08 000000047 INF: ===================Camera #0 Frame #140===================
17-02-28 20:20:18.372 -08 000000045 INF: Y Motor: Unshifted Position: 3451520
17-02-28 20:20:18.422 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.474 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:20:18.474 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:20:18.474 -08 000000053 INF: ===================Camera #2 Frame #145===================
17-02-28 20:20:18.492 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:20:18.492 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:20:18.492 -08 000000047 INF: ===================Camera #0 Frame #146===================
17-02-28 20:20:18.545 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.643 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:20:18.643 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:20:18.643 -08 000000053 INF: ===================Camera #2 Frame #152===================
17-02-28 20:20:18.660 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:20:18.660 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:20:18.660 -08 000000047 INF: ===================Camera #0 Frame #152===================
17-02-28 20:20:18.683 -08 000000045 INF: Y Motor: Unshifted Position: 3249378
17-02-28 20:20:18.733 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.815 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:20:18.815 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:20:18.815 -08 000000053 INF: ===================Camera #2 Frame #158===================
17-02-28 20:20:18.828 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:20:18.828 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:20:18.828 -08 000000047 INF: ===================Camera #0 Frame #158===================
17-02-28 20:20:18.859 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:18.986 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:20:18.986 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:20:18.986 -08 000000053 INF: ===================Camera #2 Frame #164===================
17-02-28 20:20:18.994 -08 000000045 INF: Y Motor: Unshifted Position: 3047018
17-02-28 20:20:18.997 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:20:18.997 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:20:18.997 -08 000000047 INF: ===================Camera #0 Frame #165===================
17-02-28 20:20:19.044 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.155 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:20:19.155 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:20:19.155 -08 000000053 INF: ===================Camera #2 Frame #171===================
17-02-28 20:20:19.168 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:20:19.168 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:20:19.168 -08 000000047 INF: ===================Camera #0 Frame #171===================
17-02-28 20:20:19.170 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.308 -08 000000045 INF: Y Motor: Unshifted Position: 2842922
17-02-28 20:20:19.327 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:20:19.327 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:20:19.327 -08 000000053 INF: ===================Camera #2 Frame #177===================
17-02-28 20:20:19.336 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:20:19.336 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:20:19.336 -08 000000047 INF: ===================Camera #0 Frame #177===================
17-02-28 20:20:19.358 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.481 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.496 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:20:19.496 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:20:19.496 -08 000000053 INF: ===================Camera #2 Frame #183===================
17-02-28 20:20:19.504 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:20:19.504 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:20:19.504 -08 000000047 INF: ===================Camera #0 Frame #183===================
17-02-28 20:20:19.618 -08 000000045 INF: Y Motor: Unshifted Position: 2641207
17-02-28 20:20:19.665 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:20:19.665 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:20:19.665 -08 000000053 INF: ===================Camera #2 Frame #189===================
17-02-28 20:20:19.668 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.672 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:20:19.672 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:20:19.672 -08 000000047 INF: ===================Camera #0 Frame #190===================
17-02-28 20:20:19.794 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:19.834 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:20:19.834 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:20:19.834 -08 000000053 INF: ===================Camera #2 Frame #196===================
17-02-28 20:20:19.843 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:20:19.843 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:20:19.843 -08 000000047 INF: ===================Camera #0 Frame #196===================
17-02-28 20:20:19.932 -08 000000045 INF: Y Motor: Unshifted Position: 2437118
17-02-28 20:20:19.982 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.006 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:20:20.006 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:20:20.006 -08 000000053 INF: ===================Camera #2 Frame #202===================
17-02-28 20:20:20.011 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:20:20.011 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:20:20.011 -08 000000047 INF: ===================Camera #0 Frame #202===================
17-02-28 20:20:20.105 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.175 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:20:20.175 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:20:20.175 -08 000000053 INF: ===================Camera #2 Frame #208===================
17-02-28 20:20:20.179 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:20:20.179 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:20:20.179 -08 000000047 INF: ===================Camera #0 Frame #208===================
17-02-28 20:20:20.243 -08 000000045 INF: Y Motor: Unshifted Position: 2234743
17-02-28 20:20:20.293 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.344 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:20:20.344 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:20:20.344 -08 000000053 INF: ===================Camera #2 Frame #214===================
17-02-28 20:20:20.347 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:20:20.347 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:20:20.347 -08 000000047 INF: ===================Camera #0 Frame #214===================
17-02-28 20:20:20.419 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.513 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:20:20.513 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:20:20.513 -08 000000053 INF: ===================Camera #2 Frame #221===================
17-02-28 20:20:20.515 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:20:20.515 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:20:20.515 -08 000000047 INF: ===================Camera #0 Frame #221===================
17-02-28 20:20:20.554 -08 000000045 INF: Y Motor: Unshifted Position: 2032592
17-02-28 20:20:20.604 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.685 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:20:20.685 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:20:20.685 -08 000000053 INF: ===================Camera #2 Frame #227===================
17-02-28 20:20:20.686 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:20:20.686 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:20:20.686 -08 000000047 INF: ===================Camera #0 Frame #227===================
17-02-28 20:20:20.731 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:20.854 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:20:20.854 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:20:20.854 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:20:20.854 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:20:20.854 -08 000000047 INF: ===================Camera #0 Frame #233===================
17-02-28 20:20:20.854 -08 000000053 INF: ===================Camera #2 Frame #233===================
17-02-28 20:20:20.866 -08 000000045 INF: Y Motor: Unshifted Position: 1829571
17-02-28 20:20:20.916 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.023 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:20:21.023 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:20:21.023 -08 000000047 INF: ===================Camera #0 Frame #239===================
17-02-28 20:20:21.024 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:20:21.024 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:20:21.024 -08 000000053 INF: ===================Camera #2 Frame #239===================
17-02-28 20:20:21.042 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.132 -08 000000045 INF: Y Motor: Unshifted Position: 1648223
17-02-28 20:20:21.182 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.191 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:20:21.191 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:20:21.191 -08 000000047 INF: ===================Camera #0 Frame #245===================
17-02-28 20:20:21.193 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:20:21.193 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:20:21.193 -08 000000053 INF: ===================Camera #2 Frame #246===================
17-02-28 20:20:21.308 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.359 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:20:21.359 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:20:21.359 -08 000000047 INF: ===================Camera #0 Frame #252===================
17-02-28 20:20:21.365 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:20:21.365 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:20:21.365 -08 000000053 INF: ===================Camera #2 Frame #252===================
17-02-28 20:20:21.443 -08 000000045 INF: Y Motor: Unshifted Position: 1454293
17-02-28 20:20:21.493 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.530 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:20:21.530 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:20:21.530 -08 000000047 INF: ===================Camera #0 Frame #258===================
17-02-28 20:20:21.534 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:20:21.534 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:20:21.534 -08 000000053 INF: ===================Camera #2 Frame #258===================
17-02-28 20:20:21.620 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.699 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:20:21.699 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:20:21.699 -08 000000047 INF: ===================Camera #0 Frame #264===================
17-02-28 20:20:21.704 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:20:21.704 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:20:21.704 -08 000000053 INF: ===================Camera #2 Frame #264===================
17-02-28 20:20:21.755 -08 000000045 INF: Y Motor: Unshifted Position: 1251500
17-02-28 20:20:21.805 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.868 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:20:21.868 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:20:21.868 -08 000000047 INF: ===================Camera #0 Frame #270===================
17-02-28 20:20:21.874 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:20:21.874 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:20:21.874 -08 000000053 INF: ===================Camera #2 Frame #271===================
17-02-28 20:20:21.931 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:21.956 -08 000000050 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:21.956 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:21.958 -08 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:21.959 -08 000000108 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:21.959 -08 000000109 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:21.959 -08 000000108 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:21.959 -08 000000108 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:21.959 -08 000000108 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:21.959 -08 000000109 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:21.959 -08 000000108 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:21.959 -08 000000109 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:21.959 -08 000000109 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:21.960 -08 000000109 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:22.037 -08 000000047 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:22.037 -08 000000047 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:22.037 -08 000000047 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:22.044 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:22.045 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:22.072 -08 000000045 INF: Y Motor: Unshifted Position: 1047396
17-02-28 20:20:22.122 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:22.177 -08 000000047 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:22.177 -08 000000053 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:22.177 -08 000000053 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:22.177 -08 000000053 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:22.177 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:20:22.180 -08 000000053 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:22.181 -08 000000053 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:22.208 -08 000000047 INF: ======================================
17-02-28 20:20:22.242 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:22.331 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:20:22.331 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:20:22.331 -08 000000109 INF: Excitation Filter 2: Moved 107 steps in 371.7185 ms
17-02-28 20:20:22.331 -08 000000108 INF: Excitation Filter 1: Moved 107 steps in 371.9067 ms
17-02-28 20:20:22.331 -08 000000109 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8686 ms
17-02-28 20:20:22.331 -08 000000109 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9812 ms
17-02-28 20:20:22.331 -08 000000108 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9994 ms
17-02-28 20:20:22.331 -08 000000108 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1686 ms
17-02-28 20:20:22.331 -08 000000109 INF: ======================================
17-02-28 20:20:22.331 -08 000000108 INF: ======================================
17-02-28 20:20:22.333 -08 000000064 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:22.334 -08 000000064 INF: ======================================
17-02-28 20:20:22.352 -08 000000053 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:22.352 -08 000000053 INF: ===================Camera TDI===================
17-02-28 20:20:22.380 -08 000000045 INF: Y Motor: Unshifted Position: 984109
17-02-28 20:20:22.380 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:22.380 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:22.387 -08 000000053 INF: ======================================
17-02-28 20:20:22.389 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:22.390 -08 000000075 INF: ======================================
17-02-28 20:20:22.444 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:22.444 -08 000000045 INF: Y Motor: Moved to 14.8411 after 7942 ms
17-02-28 20:20:22.444 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:22.506 -08 000000045 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:22.506 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:22.506 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:22.567 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:22.567 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:22.567 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:22.629 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:22.691 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:22.755 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:22.755 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:22.755 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:22.817 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:20:22.817 -08 000000045 INF: ======================================
17-02-28 20:20:22.818 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:22.819 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:22.820 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:22.820 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:22.892 -08 000000057 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:22.892 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:22.956 -08 000000039 INF: FPGA: Recv TDIYERD 1484110
17-02-28 20:20:22.956 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:23.018 -08 000000050 INF: FPGA: Recv ZADCR 18496
17-02-28 20:20:23.018 -08 000000018 INF: At scan end Y pos = 14.841 and Z pos = -0.071. Y moved -48.539 mm
17-02-28 20:20:23.018 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:23.079 -08 000000057 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:23.079 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:23.079 -08 000000018 INF: TDIScan finished after 12608.0035 ms
17-02-28 20:20:23.079 -08 000000018 INF: Image[0]: Y should trigger at 63.380 mm, 2nd row was at 64.289 mm (error = 0.909 mm)
17-02-28 20:20:23.079 -08 000000018 INF: Image[2]: Y should trigger at 63.380 mm, 2nd row was at 64.289 mm (error = 0.909 mm)
17-02-28 20:20:23.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.116 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.749 um
17-02-28 20:20:23.116 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.117 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:23.144 -08 000000082 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:23.145 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.145 -08 000000069 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:23.145 -08 000000108 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:23.145 -08 000000073 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:23.145 -08 000000077 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:23.146 -08 000000073 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:23.146 -08 000000073 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:23.146 -08 000000077 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:23.146 -08 000000077 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:23.146 -08 000000108 INF: ======================================
17-02-28 20:20:23.146 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:23.146 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:23.147 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:23.150 -08 000000109 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:23.179 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:23.179 -08 000000109 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:23.180 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.181 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.181 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.181 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.181 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:23.192 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:20:23.192 -08 000000073 INF: ======================================
17-02-28 20:20:23.206 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:23.206 -08 000000086 INF: FPGA: Recv ZSEL 
17-02-28 20:20:23.206 -08 000000058 INF: FPGA: Xmit ZDACW 18956\n
17-02-28 20:20:23.206 -08 000000077 INF: ======================================
17-02-28 20:20:23.255 -08 000000064 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.255 -08 000000033 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.255 -08 000000060 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.255 -08 000000052 INF: FC:A, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:23.267 -08 000000085 INF: FPGA: Recv ZDACW 
17-02-28 20:20:23.267 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:23.268 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:23.329 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:20:23.329 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:23.330 -08 000000058 INF: ======================================
17-02-28 20:20:23.406 -08 000000064 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:20:23.406 -08 000000064 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0517739436525566 in the next cycle, cycle 4 FC:A, C:3,L:6,B
17-02-28 20:20:23.406 -08 000000033 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:20:23.406 -08 000000033 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0517739436525566 in the next cycle, cycle 4 FC:A, C:3,L:6,B
17-02-28 20:20:23.406 -08 000000060 INF: LFT found best fwhm score 2.000144 in 151 ms
17-02-28 20:20:23.406 -08 000000060 INF: LFT found good score at index 4633 with fwhm value 2.000144. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:23.406 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.406 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.407 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.407 -08 000000052 INF: LFT found best fwhm score 2.000238 in 152 ms
17-02-28 20:20:23.407 -08 000000052 INF: LFT found good score at index 1733 with fwhm value 2.000238. Next cycle, cycle 4 starting Z position for bottom surface is at -0.052 mm FC:A, C:3,L:6,B
17-02-28 20:20:23.407 -08 000000064 INF: ======================================
17-02-28 20:20:23.407 -08 000000033 INF: ======================================
17-02-28 20:20:23.407 -08 000000060 INF: ======================================
17-02-28 20:20:23.407 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:20:23.407 -08 000000052 INF: ======================================
17-02-28 20:20:23.408 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:23.409 -08 000000109 INF: LFT weighted average best Z for bottom surface is at -0.052mm FC:A, C:3,L:6,B
17-02-28 20:20:23.409 -08 000000109 INF: ======================================
17-02-28 20:20:23.411 -08 000000069 INF: ======================================
17-02-28 20:20:23.412 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:23.413 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:23.414 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 20.50033 Y = 39.70494===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:20:23.415 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:20:23.438 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:20:23.438 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:23.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:23.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:23.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:23.439 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:20:23.440 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:20:23.457 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.459 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.459 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:23.459 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:23.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:23.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:23.476 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:23.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:23.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:23.477 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:23.483 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":6,"Tile":2204,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF199","HCSMMF211","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.522 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:23.523 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Selecting Reagent HSM (3)===================
17-02-28 20:20:23.523 -08 000000042 INF: Valve B1: Go to position 3
17-02-28 20:20:23.523 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:20:23.526 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:23.526 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.527 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:20:23.527 -08 000000018 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:20:23.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.528 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.529 -08 000000086 INF: ===================Move Tilt Motor 1===================
17-02-28 20:20:23.529 -08 000000086 INF: ======================================
17-02-28 20:20:23.530 -08 000000086 INF: ===================Move Tilt Motor 2===================
17-02-28 20:20:23.531 -08 000000086 INF: ======================================
17-02-28 20:20:23.545 -08 000000090 INF: ===================Move Tilt Motor 3===================
17-02-28 20:20:23.545 -08 000000090 INF: ======================================
17-02-28 20:20:23.546 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.547 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":6,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF227","HCSMMF258","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:23.556 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:20:23.567 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:20:23.567 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:23.567 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:23.567 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.568 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.573 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":6,"Tile":2206,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF228","HCSMMF284","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.575 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:20:23.575 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:20:23.575 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:20:23.586 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 8\r
17-02-28 20:20:23.586 -08 000000042 INF: Valve B1: 233.629 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:20:23.586 -08 000000042 INF: Valve B1: Taking shortest path 'CW' from 8 to 3
17-02-28 20:20:23.586 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CW3\r
17-02-28 20:20:23.587 -08 000000042 INF: SerialPort B1 (VICIB1): Recv  (discarded)
17-02-28 20:20:23.587 -08 000000042 INF: SerialPort B1 (VICIB1): Xmit CP\r
17-02-28 20:20:23.617 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":6,"Tile":2208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF204","HCSMMF189","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.689 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":6,"Tile":2205,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF280","HCSMMF239","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.689 -08 000000057 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:23.692 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.692 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:23.692 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0723 mm
17-02-28 20:20:23.693 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:20:23.699 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":6,"Tile":2210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF205","HCSMMF193","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.701 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":6,"Tile":2209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF287","HCSMMF207","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.702 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":6,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF178","HCSMMF179","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.703 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":6,"Tile":2202,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF259","HCSMMF225","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.704 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":6,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF274","HCSMMF203","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.705 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":6,"Tile":2201,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF223","HCSMMF256","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.706 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":6,"Tile":2216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF282","HCSMMF251","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.707 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":6,"Tile":2213,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF264","HCSMMF253","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.707 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":6,"Tile":2215,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF231","HCSMMF181","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.708 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":6,"Tile":2211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF246","HCSMMF187","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.709 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":6,"Tile":2214,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF245","HCSMMF192","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.710 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":6,"Tile":2220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF222","HCSMMF286","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.711 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":6,"Tile":2224,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF236","HCSMMF252","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.712 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":6,"Tile":2223,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF209","HCSMMF229","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.713 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":6,"Tile":2217,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF241","HCSMMF183","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.714 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":6,"Tile":2228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF201","HCSMMF230","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.715 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":6,"Tile":2222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF268","HCSMMF249","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.717 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":6,"Tile":2218,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF281","HCSMMF242","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.718 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":6,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF190","HCSMMF180","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.720 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":6,"Tile":2221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF176","HCSMMF206","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.721 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":6,"Tile":2219,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF217","HCSMMF195","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.722 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":6,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF266","HCSMMF221","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.723 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":6,"Tile":2227,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF218","HCSMMF257","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:23.751 -08 000000053 INF: FPGA: Recv ZTRG 
17-02-28 20:20:23.751 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:20:23.813 -08 000000057 INF: FPGA: Recv ZYT 
17-02-28 20:20:23.813 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:20:23.813 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:20:23.856 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:23.862 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:23.875 -08 000000058 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:20:23.875 -08 000000058 INF: FPGA: Recv ZMV 
17-02-28 20:20:23.875 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:20:23.875 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.915 ms
17-02-28 20:20:23.875 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:20:23.937 -08 000000108 INF: FPGA: Recv ZDACR 60292
17-02-28 20:20:23.937 -08 000000018 INF: Z Motor: MoveAndTrigger took 244.575 ms w/comms
17-02-28 20:20:23.937 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:23.937 -08 000000018 INF: Z Motor: MoveAbsStepped took 244.7761 ms
17-02-28 20:20:23.938 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:23.938 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:23.947 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:20:23.947 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:20:23.961 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:23.961 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:24.000 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:24.006 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.012 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:24.020 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:24.020 -08 000000018 INF: Transformed XStagePosition from 22.72893 mm to 22.728931427002 mm.
17-02-28 20:20:24.029 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:24.029 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:24.029 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:24.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:24.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:24.031 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:24.031 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:20:24.032 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:24.032 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:24.033 -08 000000109 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:24.033 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:20:24.034 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:24.034 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:24.034 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:24.034 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:24.035 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:24.035 -08 000000066 INF: ===================Move X Motor without settling===================
17-02-28 20:20:24.035 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:24.035 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000047 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8411 mm
17-02-28 20:20:24.035 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:24.035 -08 000000066 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:24.036 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:24.036 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:24.036 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:24.036 -08 000000073 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:24.036 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:24.036 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:24.036 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:24.036 -08 000000039 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:24.037 -08 000000085 INF: ======================================
17-02-28 20:20:24.037 -08 000000039 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:24.037 -08 000000073 INF: ======================================
17-02-28 20:20:24.037 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:24.037 -08 000000101 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:24.037 -08 000000039 INF: ======================================
17-02-28 20:20:24.038 -08 000000101 INF: ======================================
17-02-28 20:20:24.038 -08 000000082 INF: ======================================
17-02-28 20:20:24.038 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:24.039 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:24.040 -08 000000045 INF: ======================================
17-02-28 20:20:24.040 -08 000000064 INF: ======================================
17-02-28 20:20:24.040 -08 000000108 INF: ======================================
17-02-28 20:20:24.040 -08 000000038 INF: ======================================
17-02-28 20:20:24.040 -08 000000051 INF: ======================================
17-02-28 20:20:24.041 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:24.041 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:24.042 -08 000000075 INF: ======================================
17-02-28 20:20:24.042 -08 000000036 INF: ======================================
17-02-28 20:20:24.044 -08 000000109 INF: ======================================
17-02-28 20:20:24.068 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.068 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:24.068 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:24.070 -08 000000066 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:24.070 -08 000000066 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:24.105 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.111 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:24.126 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.126 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Moving to 22.7289 mm @15.000 mm/sec, started at 20.5259 mm
17-02-28 20:20:24.126 -08 000000066 INF: X Motor: Xmit MA -14857\n
17-02-28 20:20:24.190 -08 000000042 INF: SerialPort B1 (VICIB1): Recv Position is  = 3\r
17-02-28 20:20:24.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:24.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Opening shutoff valve===================
17-02-28 20:20:24.191 -08 000000066 INF: X Motor: Recv MA -14857\r\n>
17-02-28 20:20:24.191 -08 000000066 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:20:24.193 -08 000000047 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:20:24.203 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.209 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:24.255 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.255 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:20:24.255 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:24.306 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:24.315 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:24.315 -08 000000047 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:20:24.315 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.439 -08 000000047 INF: Y Motor: Unshifted Position: 1056121
17-02-28 20:20:24.489 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:24.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:24.588 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:24.613 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.622 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:24.687 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:24.695 -08 000000042 INF: KloehnPump B (KLOEHNB): Pumping from 3, aspirate port PortB, aspiration rate 250, dispense rate 2000, volume 70, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=3, Children=0, Thread="Run", Parent="Prepare for scanning", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:20:24.750 -08 000000047 INF: Y Motor: Unshifted Position: 1749119
17-02-28 20:20:24.787 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:20:24.800 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.815 -08 000000066 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:24.877 -08 000000066 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:24.877 -08 000000066 INF: X Motor: Moved to 22.7280 after 686 ms
17-02-28 20:20:24.877 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:20:24.877 -08 000000042 INF: Current Position of Pump is: 0
17-02-28 20:20:24.877 -08 000000066 INF: ======================================
17-02-28 20:20:24.927 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:24.977 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r
17-02-28 20:20:25.063 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:25.063 -08 000000047 INF: Y Motor: Unshifted Position: 2532444
17-02-28 20:20:25.113 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.163 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:25.237 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.250 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:25.374 -08 000000047 INF: Y Motor: Unshifted Position: 3319922
17-02-28 20:20:25.424 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:25.551 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.562 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:25.662 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r
17-02-28 20:20:25.688 -08 000000047 INF: Y Motor: Unshifted Position: 4093301
17-02-28 20:20:25.738 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.749 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:25.849 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:25.862 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:25.935 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:25.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Aspirating port PortB===================
17-02-28 20:20:26.000 -08 000000047 INF: Y Motor: Unshifted Position: 4870718
17-02-28 20:20:26.035 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V800IP13440R\r
17-02-28 20:20:26.050 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.123 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.174 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.223 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:26.249 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.313 -08 000000047 INF: Y Motor: Unshifted Position: 5651338
17-02-28 20:20:26.363 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.495 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:26.500 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:26.563 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.623 -08 000000047 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:20:26.623 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:26.623 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:26.631 -08 000000089 INF: RunCopyService queue size at 2/28/2017 8:20:26 PM is 2
17-02-28 20:20:26.688 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:26.688 -08 000000047 INF: Y Motor: Moved to 64.4706 after 2372 ms
17-02-28 20:20:26.688 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:26.751 -08 000000047 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:26.751 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:26.751 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:26.812 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:26.812 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:26.812 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:26.813 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:26.873 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:26.874 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:26.935 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:27.002 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:27.002 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:27.002 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:27.061 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:20:27.061 -08 000000047 INF: ======================================
17-02-28 20:20:27.062 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:20:27.063 -08 000000035 INF: ======================================
17-02-28 20:20:27.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:27.065 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:27.066 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:20:27.066 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:20:27.123 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:27.124 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:27.124 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:20:27.188 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:27.188 -08 000000060 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:27.189 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:27.189 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:27.189 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:27.245 -08 000000030 INF: FPGA: Recv TDIYERD 6447056
17-02-28 20:20:27.245 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447056 counts (64.471 mm)
17-02-28 20:20:27.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:27.246 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:27.247 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.247 -08 000000035 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:27.247 -08 000000035 INF: ======================================
17-02-28 20:20:27.248 -08 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:27.248 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.249 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:20:27.250 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:27.250 -08 000000047 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:20:27.310 -08 000000045 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:27.311 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:20:27.312 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:27.312 -08 000000047 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:20:27.370 -08 000000030 INF: FPGA: Recv TDIYARM2
17-02-28 20:20:27.371 -08 000000047 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:20:27.373 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.375 -08 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:27.375 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:27.378 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:20:27.379 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:20:27.380 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:27.438 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:27.496 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:27.746 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:27.753 -08 000000047 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:20:27.753 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:20:27.753 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:27.769 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:20:27.771 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:27.808 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.058 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.121 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.153 -08 000000047 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:20:28.153 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:20:28.153 -08 000000047 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:28.168 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:20:28.171 -08 000000047 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:20:28.173 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:28.175 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:28.176 -08 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:28.177 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:28.179 -08 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:28.179 -08 000000047 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:28.179 -08 000000047 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:20:28.179 -08 000000047 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:20:28.244 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:20:28.244 -08 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:20:28.244 -08 000000047 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:20:28.306 -08 000000030 INF: FPGA: Recv ZARM
17-02-28 20:20:28.306 -08 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2312 ms
17-02-28 20:20:28.306 -08 000000047 INF: Z Motor: ArmAbsStepped took 126.8273 ms
17-02-28 20:20:28.307 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:28.309 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:20:28.311 -08 000000047 INF: ======================================
17-02-28 20:20:28.312 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:28.313 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:28.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.314 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.315 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.316 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:28.316 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:28.316 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:28.316 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:28.316 -08 000000066 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:28.316 -08 000000066 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:28.316 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:28.316 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:28.316 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:28.317 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:28.371 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.435 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.681 -08 000000033 INF: FPGA: Recv EX2MV
17-02-28 20:20:28.681 -08 000000033 INF: FPGA: Recv EX1MV
17-02-28 20:20:28.681 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 365.0949 ms
17-02-28 20:20:28.681 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 365.3062 ms
17-02-28 20:20:28.681 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.2351 ms
17-02-28 20:20:28.681 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.3875 ms
17-02-28 20:20:28.681 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.4598 ms
17-02-28 20:20:28.681 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.6309 ms
17-02-28 20:20:28.682 -08 000000050 INF: ======================================
17-02-28 20:20:28.682 -08 000000066 INF: ======================================
17-02-28 20:20:28.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:28.685 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.685 -08 000000064 INF: ===================Serial===================
17-02-28 20:20:28.685 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:20:28.685 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:28.685 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:28.686 -08 000000051 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:20:28.686 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:28.686 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:28.686 -08 000000064 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:20:28.686 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:28.686 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:28.686 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:28.687 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:28.687 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:20:28.687 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:28.688 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.688 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.689 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.689 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.744 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:28.745 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.745 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:28.745 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:28.807 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.807 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:28.838 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.838 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.839 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.839 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:20:28.869 -08 000000051 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:20:28.934 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.934 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:20:28.934 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:28.988 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.988 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.989 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:28.989 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:28.994 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:28.997 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:28.997 -08 000000051 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:20:28.997 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.057 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:29.121 -08 000000051 INF: Y Motor: Unshifted Position: 5929034
17-02-28 20:20:29.138 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:29.138 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:29.139 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:29.139 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:29.171 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.288 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:20:29.288 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:20:29.288 -08 000000075 INF: ===================Camera #2 Frame #1===================
17-02-28 20:20:29.289 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:20:29.289 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:20:29.289 -08 000000010 INF: ===================Camera #0 Frame #1===================
17-02-28 20:20:29.294 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.307 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:29.370 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:29.433 -08 000000051 INF: Y Motor: Unshifted Position: 5882030
17-02-28 20:20:29.443 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:20:29.443 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:20:29.443 -08 000000075 INF: ===================Camera #2 Frame #3===================
17-02-28 20:20:29.444 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:20:29.444 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:20:29.444 -08 000000010 INF: ===================Camera #0 Frame #3===================
17-02-28 20:20:29.483 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.599 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:29.599 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:29.599 -08 000000075 INF: ===================Camera #2 Frame #4===================
17-02-28 20:20:29.603 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:29.603 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:29.603 -08 000000010 INF: ===================Camera #0 Frame #4===================
17-02-28 20:20:29.607 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.620 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:29.680 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:29.743 -08 000000051 INF: Y Motor: Unshifted Position: 5835525
17-02-28 20:20:29.754 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:29.754 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:29.754 -08 000000075 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:29.758 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:29.758 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:29.758 -08 000000010 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:29.793 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.806 -08 000000053 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:29.806 -08 000000053 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:29.806 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:29.806 -08 000000064 INF: ===================Serial===================
17-02-28 20:20:29.808 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:29.808 -08 000000064 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:20:29.808 -08 000000064 INF: ===================Serial===================
17-02-28 20:20:29.809 -08 000000078 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:29.809 -08 000000034 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:29.809 -08 000000078 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:29.809 -08 000000078 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:29.809 -08 000000078 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:29.809 -08 000000078 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:29.809 -08 000000034 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:29.809 -08 000000034 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:29.809 -08 000000034 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:29.809 -08 000000064 INF: ======================================
17-02-28 20:20:29.810 -08 000000034 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:29.908 -08 000000075 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:20:29.908 -08 000000075 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:20:29.908 -08 000000075 INF: ===================Camera #2 Frame #6===================
17-02-28 20:20:29.911 -08 000000010 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:20:29.911 -08 000000010 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:20:29.911 -08 000000010 INF: ===================Camera #0 Frame #6===================
17-02-28 20:20:29.911 -08 000000075 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:20:29.912 -08 000000075 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:29.914 -08 000000010 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:20:29.915 -08 000000010 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:29.920 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:29.930 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:29.937 -08 000000075 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:29.937 -08 000000075 INF: ===================Camera TDI===================
17-02-28 20:20:29.938 -08 000000075 INF: ======================================
17-02-28 20:20:29.962 -08 000000010 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:29.962 -08 000000010 INF: ===================Camera TDI===================
17-02-28 20:20:29.964 -08 000000010 INF: ======================================
17-02-28 20:20:29.966 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:20:29.967 -08 000000036 INF: ======================================
17-02-28 20:20:29.995 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.059 -08 000000051 INF: Y Motor: Unshifted Position: 5790761
17-02-28 20:20:30.109 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:30.179 -08 000000075 INF: FPGA: Recv EX1MV
17-02-28 20:20:30.179 -08 000000075 INF: FPGA: Recv EX2MV
17-02-28 20:20:30.179 -08 000000034 INF: Excitation Filter 2: Moved 107 steps in 369.8792 ms
17-02-28 20:20:30.179 -08 000000034 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.0461 ms
17-02-28 20:20:30.179 -08 000000034 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1312 ms
17-02-28 20:20:30.179 -08 000000078 INF: Excitation Filter 1: Moved 107 steps in 370.0693 ms
17-02-28 20:20:30.179 -08 000000078 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4723 ms
17-02-28 20:20:30.179 -08 000000078 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.5453 ms
17-02-28 20:20:30.180 -08 000000034 INF: ======================================
17-02-28 20:20:30.180 -08 000000078 INF: ======================================
17-02-28 20:20:30.181 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:30.182 -08 000000047 INF: ======================================
17-02-28 20:20:30.244 -08 000000051 INF: Y Motor: Unshifted Position: 5790746
17-02-28 20:20:30.244 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:30.244 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:30.245 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:30.305 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.306 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:30.306 -08 000000051 INF: Y Motor: Moved to 62.9075 after 1309 ms
17-02-28 20:20:30.306 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:30.368 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:30.368 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:30.368 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:30.430 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:30.430 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:30.430 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:30.493 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:30.554 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:30.555 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:30.619 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.620 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:30.620 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:30.620 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:30.681 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:20:30.681 -08 000000051 INF: ======================================
17-02-28 20:20:30.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:30.683 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:20:30.684 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:30.684 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:30.739 -08 000000033 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:30.739 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:30.804 -08 000000025 INF: FPGA: Recv TDIYERD 6290744
17-02-28 20:20:30.804 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:30.864 -08 000000010 INF: FPGA: Recv ZADCR 2428
17-02-28 20:20:30.864 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:20:30.864 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:30.869 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:30.931 -08 000000077 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:20:30.931 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:20:30.931 -08 000000018 INF: TDIScan finished after 6910.1193 ms
17-02-28 20:20:30.931 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:20:30.931 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:20:30.931 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:30.932 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:30.989 -08 000000108 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:30.990 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:30.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:30.992 -08 000000090 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:30.992 -08 000000089 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:30.992 -08 000000090 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:30.992 -08 000000090 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:30.992 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:30.992 -08 000000089 INF: ======================================
17-02-28 20:20:30.992 -08 000000086 INF: ======================================
17-02-28 20:20:31.053 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:20:31.053 -08 000000090 INF: ======================================
17-02-28 20:20:31.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.056 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:31.090 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.090 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:31.139 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.139 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:31.182 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:31.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.190 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:31.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:31.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:31.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:31.233 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:20:31.241 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:31.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:31.241 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:20:31.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:20:31.491 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:31.554 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:31.804 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:31.863 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:31.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:20:31.902 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0540381251742756Best Z position at top surface = -0.124606453902507Best Z position at top surface + compensator offset = -0.101906453902507 C:3,L:7,B
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.124606453902507
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.74354
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0540381251742756
17-02-28 20:20:31.904 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.4037
17-02-28 20:20:31.904 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0540381251742756.
17-02-28 20:20:31.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:32.038 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:32.038 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:32.052 -08 000000077 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:32.052 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:20:32.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.054 -08 000000018 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.178552, m2=5.243068, m3=5.271008
17-02-28 20:20:32.054 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.055 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.056 -08 000000064 INF: ===================Move Tilt Motor 2===================
17-02-28 20:20:32.056 -08 000000082 INF: ===================Move Tilt Motor 3===================
17-02-28 20:20:32.056 -08 000000085 INF: ===================Move Tilt Motor 1===================
17-02-28 20:20:32.056 -08 000000085 INF: ======================================
17-02-28 20:20:32.056 -08 000000082 INF: ======================================
17-02-28 20:20:32.057 -08 000000064 INF: ======================================
17-02-28 20:20:32.058 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.059 -08 000000018 INF: ETF Best Z: -0.05403813 mm (14166 DAC)
17-02-28 20:20:32.059 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.060 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.060 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:20:32.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.061 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:32.067 -08 000000018 INF: Swath 1 position calculated to be: {X=22.15734, Y=39.70494} from estimated center X= 22.652, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:20:32.067 -08 000000018 INF: Swath 2 position calculated to be: {X=23.26534, Y=39.70494} from estimated center X= 22.652, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:20:32.461 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:32.474 -08 000000018 INF: Swath 0: Converted transform from (92.96733, -11.40828) pixels to (0.032085, -0.003795) mm.
17-02-28 20:20:32.479 -08 000000018 INF: Swath 1: Converted transform from (71.06396, -7.51053) pixels to (0.024495, -0.00276) mm.
17-02-28 20:20:32.480 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:32.481 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:32.481 -08 000000018 INF: Transformed XStagePosition from 22.15734 mm to 22.1894202828407 mm.
17-02-28 20:20:32.492 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4911507397201 mm.
17-02-28 20:20:32.492 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2911507397201 mm.
17-02-28 20:20:32.492 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3819007397201 mm.
17-02-28 20:20:32.494 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:32.495 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:32.495 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:32.495 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:20:32.503 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:32.503 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:32.504 -08 000000033 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:32.504 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:20:32.504 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:32.505 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:32.505 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:32.505 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:20:32.505 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:32.505 -08 000000077 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:32.505 -08 000000081 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:32.505 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:32.505 -08 000000081 INF: Z Motor: Moving to -0.0740 mm, started at -0.0100 mm
17-02-28 20:20:32.505 -08 000000081 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:20:32.506 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:32.506 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:32.506 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:32.506 -08 000000051 INF: ===================Move X Motor without settling===================
17-02-28 20:20:32.507 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:32.507 -08 000000051 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:32.507 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:32.507 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:32.507 -08 000000089 INF: Y Motor: Moving to 64.4912 mm @25.000 mm/sec, started at 62.9075 mm
17-02-28 20:20:32.507 -08 000000053 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:32.507 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:32.507 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:32.507 -08 000000066 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:32.507 -08 000000108 INF: ======================================
17-02-28 20:20:32.507 -08 000000052 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:32.507 -08 000000053 INF: ======================================
17-02-28 20:20:32.507 -08 000000066 INF: ======================================
17-02-28 20:20:32.508 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:32.508 -08 000000105 INF: ======================================
17-02-28 20:20:32.508 -08 000000052 INF: ======================================
17-02-28 20:20:32.508 -08 000000078 INF: ======================================
17-02-28 20:20:32.509 -08 000000082 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:32.509 -08 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:32.509 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:32.510 -08 000000082 INF: ======================================
17-02-28 20:20:32.510 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:32.510 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:32.510 -08 000000064 INF: ======================================
17-02-28 20:20:32.510 -08 000000087 INF: ======================================
17-02-28 20:20:32.511 -08 000000082 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:32.511 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:32.512 -08 000000050 INF: ======================================
17-02-28 20:20:32.512 -08 000000082 INF: ======================================
17-02-28 20:20:32.513 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:32.515 -08 000000025 INF: ======================================
17-02-28 20:20:32.516 -08 000000033 INF: ======================================
17-02-28 20:20:32.520 -08 000000090 INF: FPGA: Recv ZTRG 
17-02-28 20:20:32.520 -08 000000081 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:20:32.521 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:32.582 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:20:32.583 -08 000000081 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:20:32.583 -08 000000081 INF: FPGA: Xmit ZMV 19408\n
17-02-28 20:20:32.584 -08 000000051 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:32.584 -08 000000051 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:32.584 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.584 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:32.584 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:32.642 -08 000000010 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:20:32.642 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:32.644 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Moving to 22.1894 mm @15.000 mm/sec, started at 22.7280 mm
17-02-28 20:20:32.644 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:32.644 -08 000000051 INF: X Motor: Xmit MA -15078\n
17-02-28 20:20:32.707 -08 000000073 INF: FPGA: Recv ZMV 
17-02-28 20:20:32.707 -08 000000081 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.1398 ms
17-02-28 20:20:32.707 -08 000000081 INF: FPGA: Xmit ZDACR\n
17-02-28 20:20:32.709 -08 000000051 INF: X Motor: Recv MA -15078\r\n>
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:32.709 -08 000000051 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Set target position to 5949115 encoder counts
17-02-28 20:20:32.709 -08 000000089 INF: Y Motor: Xmit s r0xca 5949115\r
17-02-28 20:20:32.767 -08 000000038 INF: FPGA: Recv ZDACR 19408
17-02-28 20:20:32.767 -08 000000081 INF: Z Motor: MoveAndTrigger took 261.5562 ms w/comms
17-02-28 20:20:32.767 -08 000000081 INF: Z Motor: After move to -0.0740, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:32.767 -08 000000081 INF: Z Motor: MoveAbsStepped took 261.728 ms
17-02-28 20:20:32.767 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:32.769 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.769 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:20:32.769 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:32.769 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:20:32.770 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:20:32.770 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:32.771 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:32.771 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.771 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:32.771 -08 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:32.772 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:32.772 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:32.772 -08 000000082 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:20:32.832 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:20:32.833 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:32.833 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:32.833 -08 000000082 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:20:32.834 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:32.834 -08 000000089 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:20:32.834 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:32.894 -08 000000105 INF: FPGA: Recv TDIBB
17-02-28 20:20:32.894 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:32.896 -08 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:32.896 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.898 -08 000000082 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:20:32.898 -08 000000082 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:20:32.898 -08 000000082 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:20:32.956 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:32.956 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.958 -08 000000089 INF: Y Motor: Unshifted Position: 5875539
17-02-28 20:20:32.958 -08 000000082 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:32.958 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:32.960 -08 000000082 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:32.960 -08 000000082 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:32.960 -08 000000082 INF: Z Motor: Arming to move to -0.0340 mm
17-02-28 20:20:32.960 -08 000000082 INF: FPGA: Xmit ZYT 6429115 4\n
17-02-28 20:20:33.008 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:33.019 -08 000000075 INF: FPGA: Recv ZYT 
17-02-28 20:20:33.019 -08 000000082 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6375539 enc / 63.755 mm / ) = 6429115 enc / 64.291 mm
17-02-28 20:20:33.019 -08 000000082 INF: FPGA: Xmit ZARM 8923\n
17-02-28 20:20:33.081 -08 000000036 INF: FPGA: Recv ZARM
17-02-28 20:20:33.081 -08 000000082 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9792 ms
17-02-28 20:20:33.081 -08 000000082 INF: Z Motor: ArmAbsStepped took 120.7894 ms
17-02-28 20:20:33.081 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:33.083 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:33.083 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:33.084 -08 000000082 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:33.085 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:33.086 -08 000000082 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:33.087 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:20:33.088 -08 000000082 INF: ======================================
17-02-28 20:20:33.133 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:33.145 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:33.146 -08 000000051 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:33.208 -08 000000051 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:33.208 -08 000000051 INF: X Motor: Moved to 22.1885 after 499 ms
17-02-28 20:20:33.208 -08 000000051 INF: ======================================
17-02-28 20:20:33.269 -08 000000089 INF: Y Motor: Unshifted Position: 5949116
17-02-28 20:20:33.269 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:33.269 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:33.331 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:33.331 -08 000000089 INF: Y Motor: Moved to 64.4912 after 497 ms
17-02-28 20:20:33.331 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:33.393 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:33.393 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:33.393 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:33.395 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:33.456 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:33.457 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:33.457 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:33.457 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:33.519 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:33.582 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:33.644 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:33.644 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:33.644 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:33.706 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:33.707 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:20:33.707 -08 000000089 INF: ======================================
17-02-28 20:20:33.708 -08 000000077 INF: ===================Move X,Y===================
17-02-28 20:20:33.709 -08 000000077 INF: ======================================
17-02-28 20:20:33.739 -08 000000073 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:33.739 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:33.740 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:33.755 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:33.757 -08 000000073 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:33.769 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.019 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.080 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.330 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.391 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.641 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.703 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:34.810 -08 000000073 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:34.810 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:34.810 -08 000000073 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:34.825 -08 000000073 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:34.827 -08 000000073 INF: ===================Camera Arm TDI===================
17-02-28 20:20:34.828 -08 000000073 INF: ======================================
17-02-28 20:20:34.829 -08 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:34.830 -08 000000081 INF: ======================================
17-02-28 20:20:34.831 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:34.832 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:34.832 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:34.832 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:34.893 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:34.893 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:34.953 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:34.955 -08 000000010 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:34.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:34.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:34.956 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:35.015 -08 000000051 INF: FPGA: Recv TDIYERD 6449116
17-02-28 20:20:35.015 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449116 counts (64.491 mm)
17-02-28 20:20:35.015 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:35.016 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.016 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:35.017 -08 000000060 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:35.017 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:35.017 -08 000000039 INF: ======================================
17-02-28 20:20:35.017 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:35.018 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:35.018 -08 000000060 INF: FPGA: Xmit TDIYPOS 6338190\n
17-02-28 20:20:35.077 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:35.077 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:35.078 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:35.079 -08 000000060 INF: FPGA: Xmit TDIYARM3 139264 6429115 1 1\n
17-02-28 20:20:35.139 -08 000000089 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:35.139 -08 000000060 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:35.140 -08 000000060 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:35.141 -08 000000060 INF: ======================================
17-02-28 20:20:35.142 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:35.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:35.143 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.145 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:35.145 -08 000000036 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:35.145 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:35.145 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:35.145 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:35.145 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:35.145 -08 000000036 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:35.145 -08 000000036 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:35.145 -08 000000036 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:35.149 -08 000000036 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:35.266 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:35.329 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.513 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:20:35.513 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:20:35.513 -08 000000036 INF: Excitation Filter 1: Moved -107 steps in 367.4838 ms
17-02-28 20:20:35.513 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 367.7567 ms
17-02-28 20:20:35.513 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.864 ms
17-02-28 20:20:35.513 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9316 ms
17-02-28 20:20:35.513 -08 000000036 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.5845 ms
17-02-28 20:20:35.513 -08 000000036 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.0784 ms
17-02-28 20:20:35.513 -08 000000105 INF: ======================================
17-02-28 20:20:35.514 -08 000000036 INF: ======================================
17-02-28 20:20:35.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.516 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:35.516 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:20:35.516 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:35.516 -08 000000057 INF: ===================FPGA Z Wait===================
17-02-28 20:20:35.516 -08 000000038 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:35.517 -08 000000057 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:35.517 -08 000000038 INF: Y Motor: Moving to 14.8428 mm @6.500 mm/sec, started at 64.4912 mm
17-02-28 20:20:35.517 -08 000000038 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:35.517 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:35.517 -08 000000035 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:35.517 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:35.518 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:20:35.518 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:20:35.518 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:35.520 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.520 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.520 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.520 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.577 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.577 -08 000000038 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:35.577 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:35.579 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:35.640 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.641 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.641 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:35.670 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.670 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.670 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.670 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Set target position to 984281 encoder counts
17-02-28 20:20:35.703 -08 000000038 INF: Y Motor: Xmit s r0xca 984281\r
17-02-28 20:20:35.767 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.767 -08 000000038 INF: Y Motor: Start the move command
17-02-28 20:20:35.767 -08 000000038 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:35.820 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.820 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.820 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:35.820 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:35.829 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:35.829 -08 000000038 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:35.829 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:35.887 -08 000000073 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:35.887 -08 000000057 INF: ======================================
17-02-28 20:20:35.890 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:35.950 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:35.951 -08 000000038 INF: Y Motor: Unshifted Position: 5888557
17-02-28 20:20:35.970 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:35.970 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:35.970 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:35.970 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:20:35.970 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:20:35.970 -08 000000077 INF: ===================Camera #0 Frame #4===================
17-02-28 20:20:36.001 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.127 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.133 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:20:36.133 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:20:36.133 -08 000000077 INF: ===================Camera #0 Frame #10===================
17-02-28 20:20:36.134 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:20:36.134 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:20:36.134 -08 000000064 INF: ===================Camera #2 Frame #10===================
17-02-28 20:20:36.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:36.265 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:36.266 -08 000000038 INF: Y Motor: Unshifted Position: 5684463
17-02-28 20:20:36.304 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:36.304 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:36.304 -08 000000077 INF: ===================Camera #0 Frame #17===================
17-02-28 20:20:36.306 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:36.306 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:36.306 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:20:36.316 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.441 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.477 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:36.477 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:36.477 -08 000000077 INF: ===================Camera #0 Frame #23===================
17-02-28 20:20:36.480 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:36.480 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:36.480 -08 000000064 INF: ===================Camera #2 Frame #23===================
17-02-28 20:20:36.515 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:36.576 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:36.577 -08 000000038 INF: Y Motor: Unshifted Position: 5482102
17-02-28 20:20:36.627 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.647 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:20:36.647 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:20:36.647 -08 000000077 INF: ===================Camera #0 Frame #29===================
17-02-28 20:20:36.650 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:20:36.650 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:20:36.650 -08 000000064 INF: ===================Camera #2 Frame #29===================
17-02-28 20:20:36.753 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.817 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:36.817 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:36.817 -08 000000077 INF: ===================Camera #0 Frame #36===================
17-02-28 20:20:36.821 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:20:36.821 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:20:36.821 -08 000000064 INF: ===================Camera #2 Frame #36===================
17-02-28 20:20:36.826 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:36.889 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:36.890 -08 000000038 INF: Y Motor: Unshifted Position: 5277345
17-02-28 20:20:36.940 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:36.989 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:36.989 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:36.989 -08 000000077 INF: ===================Camera #0 Frame #42===================
17-02-28 20:20:36.994 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:20:36.994 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:20:36.994 -08 000000064 INF: ===================Camera #2 Frame #42===================
17-02-28 20:20:37.065 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.139 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:37.157 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:37.157 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:37.157 -08 000000077 INF: ===================Camera #0 Frame #48===================
17-02-28 20:20:37.163 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:20:37.163 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:20:37.163 -08 000000064 INF: ===================Camera #2 Frame #48===================
17-02-28 20:20:37.200 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:37.201 -08 000000038 INF: Y Motor: Unshifted Position: 5076283
17-02-28 20:20:37.251 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.327 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:20:37.327 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:20:37.327 -08 000000077 INF: ===================Camera #0 Frame #54===================
17-02-28 20:20:37.333 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:37.333 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:37.333 -08 000000064 INF: ===================Camera #2 Frame #55===================
17-02-28 20:20:37.375 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.450 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:37.495 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:37.495 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:37.495 -08 000000077 INF: ===================Camera #0 Frame #61===================
17-02-28 20:20:37.506 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:20:37.506 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:20:37.506 -08 000000064 INF: ===================Camera #2 Frame #61===================
17-02-28 20:20:37.511 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:37.512 -08 000000038 INF: Y Motor: Unshifted Position: 4873480
17-02-28 20:20:37.562 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.667 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:37.667 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:37.667 -08 000000077 INF: ===================Camera #0 Frame #67===================
17-02-28 20:20:37.676 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:20:37.676 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:20:37.676 -08 000000064 INF: ===================Camera #2 Frame #67===================
17-02-28 20:20:37.688 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.761 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:37.823 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:37.824 -08 000000038 INF: Y Motor: Unshifted Position: 4671114
17-02-28 20:20:37.836 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:20:37.836 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:20:37.836 -08 000000077 INF: ===================Camera #0 Frame #73===================
17-02-28 20:20:37.846 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:20:37.846 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:20:37.846 -08 000000064 INF: ===================Camera #2 Frame #73===================
17-02-28 20:20:37.874 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:37.999 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.005 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:20:38.005 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:20:38.005 -08 000000077 INF: ===================Camera #0 Frame #79===================
17-02-28 20:20:38.016 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:20:38.016 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:20:38.016 -08 000000064 INF: ===================Camera #2 Frame #80===================
17-02-28 20:20:38.075 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:38.136 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:38.136 -08 000000038 INF: Y Motor: Unshifted Position: 4466783
17-02-28 20:20:38.175 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:38.175 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:38.175 -08 000000077 INF: ===================Camera #0 Frame #86===================
17-02-28 20:20:38.186 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.190 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:20:38.190 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:20:38.190 -08 000000064 INF: ===================Camera #2 Frame #86===================
17-02-28 20:20:38.312 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.347 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:20:38.347 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:20:38.347 -08 000000077 INF: ===================Camera #0 Frame #92===================
17-02-28 20:20:38.360 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:20:38.360 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:20:38.360 -08 000000064 INF: ===================Camera #2 Frame #92===================
17-02-28 20:20:38.386 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:38.451 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:38.452 -08 000000038 INF: Y Motor: Unshifted Position: 4258575
17-02-28 20:20:38.502 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.516 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:20:38.516 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:20:38.516 -08 000000077 INF: ===================Camera #0 Frame #98===================
17-02-28 20:20:38.530 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:20:38.530 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:20:38.530 -08 000000064 INF: ===================Camera #2 Frame #99===================
17-02-28 20:20:38.627 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.685 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:20:38.685 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:20:38.685 -08 000000077 INF: ===================Camera #0 Frame #104===================
17-02-28 20:20:38.701 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:38.703 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:20:38.703 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:20:38.703 -08 000000064 INF: ===================Camera #2 Frame #105===================
17-02-28 20:20:38.760 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:38.761 -08 000000038 INF: Y Motor: Unshifted Position: 4061828
17-02-28 20:20:38.811 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:38.854 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:38.854 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:38.854 -08 000000077 INF: ===================Camera #0 Frame #111===================
17-02-28 20:20:38.874 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:20:38.874 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:20:38.874 -08 000000064 INF: ===================Camera #2 Frame #111===================
17-02-28 20:20:38.935 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.010 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:39.027 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:20:39.027 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:20:39.027 -08 000000077 INF: ===================Camera #0 Frame #117===================
17-02-28 20:20:39.044 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:20:39.044 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:20:39.044 -08 000000064 INF: ===================Camera #2 Frame #118===================
17-02-28 20:20:39.072 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:39.073 -08 000000038 INF: Y Motor: Unshifted Position: 3858814
17-02-28 20:20:39.123 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.197 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:20:39.197 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:20:39.197 -08 000000077 INF: ===================Camera #0 Frame #123===================
17-02-28 20:20:39.218 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:20:39.218 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:20:39.218 -08 000000064 INF: ===================Camera #2 Frame #124===================
17-02-28 20:20:39.249 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.322 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:39.367 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:20:39.367 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:20:39.367 -08 000000077 INF: ===================Camera #0 Frame #129===================
17-02-28 20:20:39.384 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:39.385 -08 000000038 INF: Y Motor: Unshifted Position: 3656015
17-02-28 20:20:39.389 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:20:39.389 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:20:39.389 -08 000000064 INF: ===================Camera #2 Frame #130===================
17-02-28 20:20:39.435 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.536 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:20:39.536 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:20:39.536 -08 000000077 INF: ===================Camera #0 Frame #136===================
17-02-28 20:20:39.559 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.560 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:20:39.560 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:20:39.560 -08 000000064 INF: ===================Camera #2 Frame #137===================
17-02-28 20:20:39.634 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:39.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:39.697 -08 000000038 INF: Y Motor: Unshifted Position: 3452995
17-02-28 20:20:39.709 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:20:39.709 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:20:39.709 -08 000000077 INF: ===================Camera #0 Frame #142===================
17-02-28 20:20:39.734 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:20:39.734 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:20:39.734 -08 000000064 INF: ===================Camera #2 Frame #143===================
17-02-28 20:20:39.747 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.875 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:39.879 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:20:39.879 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:20:39.879 -08 000000077 INF: ===================Camera #0 Frame #148===================
17-02-28 20:20:39.904 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:20:39.904 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:20:39.904 -08 000000064 INF: ===================Camera #2 Frame #149===================
17-02-28 20:20:39.946 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.009 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.010 -08 000000038 INF: Y Motor: Unshifted Position: 3250635
17-02-28 20:20:40.049 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:20:40.049 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:20:40.049 -08 000000077 INF: ===================Camera #0 Frame #155===================
17-02-28 20:20:40.060 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.075 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:20:40.075 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:20:40.075 -08 000000064 INF: ===================Camera #2 Frame #156===================
17-02-28 20:20:40.185 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.222 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:20:40.222 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:20:40.222 -08 000000077 INF: ===================Camera #0 Frame #161===================
17-02-28 20:20:40.249 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:20:40.249 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:20:40.249 -08 000000064 INF: ===================Camera #2 Frame #162===================
17-02-28 20:20:40.259 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.321 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.322 -08 000000038 INF: Y Motor: Unshifted Position: 3046538
17-02-28 20:20:40.372 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.392 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:20:40.392 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:20:40.392 -08 000000077 INF: ===================Camera #0 Frame #167===================
17-02-28 20:20:40.419 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:20:40.419 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:20:40.419 -08 000000064 INF: ===================Camera #2 Frame #168===================
17-02-28 20:20:40.496 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.562 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:20:40.562 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:20:40.562 -08 000000077 INF: ===================Camera #0 Frame #173===================
17-02-28 20:20:40.571 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.590 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:20:40.590 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:20:40.590 -08 000000064 INF: ===================Camera #2 Frame #175===================
17-02-28 20:20:40.632 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.633 -08 000000038 INF: Y Motor: Unshifted Position: 2844395
17-02-28 20:20:40.683 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.732 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:20:40.732 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:20:40.732 -08 000000077 INF: ===================Camera #0 Frame #180===================
17-02-28 20:20:40.764 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:20:40.764 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:20:40.764 -08 000000064 INF: ===================Camera #2 Frame #181===================
17-02-28 20:20:40.809 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:40.882 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:40.905 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:20:40.905 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:20:40.905 -08 000000077 INF: ===================Camera #0 Frame #186===================
17-02-28 20:20:40.935 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:20:40.935 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:20:40.935 -08 000000064 INF: ===================Camera #2 Frame #187===================
17-02-28 20:20:40.945 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:40.946 -08 000000038 INF: Y Motor: Unshifted Position: 2640074
17-02-28 20:20:40.996 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.074 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:20:41.074 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:20:41.074 -08 000000077 INF: ===================Camera #0 Frame #192===================
17-02-28 20:20:41.106 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:20:41.106 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:20:41.106 -08 000000064 INF: ===================Camera #2 Frame #194===================
17-02-28 20:20:41.120 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.195 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:41.243 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:20:41.243 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:20:41.243 -08 000000077 INF: ===================Camera #0 Frame #199===================
17-02-28 20:20:41.257 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:41.258 -08 000000038 INF: Y Motor: Unshifted Position: 2436419
17-02-28 20:20:41.280 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:20:41.280 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:20:41.280 -08 000000064 INF: ===================Camera #2 Frame #200===================
17-02-28 20:20:41.308 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.415 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:20:41.415 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:20:41.415 -08 000000077 INF: ===================Camera #0 Frame #205===================
17-02-28 20:20:41.433 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.451 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:20:41.451 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:20:41.451 -08 000000064 INF: ===================Camera #2 Frame #206===================
17-02-28 20:20:41.507 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:41.568 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:41.569 -08 000000038 INF: Y Motor: Unshifted Position: 2235561
17-02-28 20:20:41.584 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:20:41.584 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:20:41.584 -08 000000077 INF: ===================Camera #0 Frame #211===================
17-02-28 20:20:41.619 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.622 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:20:41.622 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:20:41.622 -08 000000064 INF: ===================Camera #2 Frame #213===================
17-02-28 20:20:41.744 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.754 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:20:41.754 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:20:41.754 -08 000000077 INF: ===================Camera #0 Frame #217===================
17-02-28 20:20:41.796 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:20:41.796 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:20:41.796 -08 000000064 INF: ===================Camera #2 Frame #219===================
17-02-28 20:20:41.818 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:41.879 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:41.880 -08 000000038 INF: Y Motor: Unshifted Position: 2032762
17-02-28 20:20:41.924 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:20:41.924 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:20:41.924 -08 000000077 INF: ===================Camera #0 Frame #224===================
17-02-28 20:20:41.930 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:41.967 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:20:41.967 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:20:41.967 -08 000000064 INF: ===================Camera #2 Frame #225===================
17-02-28 20:20:42.056 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.096 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:20:42.096 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:20:42.096 -08 000000077 INF: ===================Camera #0 Frame #230===================
17-02-28 20:20:42.129 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:42.138 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:20:42.138 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:20:42.138 -08 000000064 INF: ===================Camera #2 Frame #232===================
17-02-28 20:20:42.194 -08 000000038 INF: Y Motor: Unshifted Position: 1830394
17-02-28 20:20:42.195 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:42.244 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.265 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:20:42.265 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:20:42.265 -08 000000077 INF: ===================Camera #0 Frame #236===================
17-02-28 20:20:42.312 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:20:42.312 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:20:42.312 -08 000000064 INF: ===================Camera #2 Frame #238===================
17-02-28 20:20:42.371 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.433 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:20:42.433 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:20:42.433 -08 000000077 INF: ===================Camera #0 Frame #242===================
17-02-28 20:20:42.445 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:42.483 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:20:42.483 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:20:42.483 -08 000000064 INF: ===================Camera #2 Frame #244===================
17-02-28 20:20:42.505 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:42.506 -08 000000038 INF: Y Motor: Unshifted Position: 1626081
17-02-28 20:20:42.556 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.603 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:20:42.603 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:20:42.603 -08 000000077 INF: ===================Camera #0 Frame #249===================
17-02-28 20:20:42.654 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:20:42.654 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:20:42.654 -08 000000064 INF: ===================Camera #2 Frame #251===================
17-02-28 20:20:42.679 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.755 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:42.776 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:20:42.776 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:20:42.776 -08 000000077 INF: ===================Camera #0 Frame #255===================
17-02-28 20:20:42.816 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:42.817 -08 000000038 INF: Y Motor: Unshifted Position: 1423923
17-02-28 20:20:42.828 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:20:42.828 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:20:42.828 -08 000000064 INF: ===================Camera #2 Frame #257===================
17-02-28 20:20:42.867 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.946 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:20:42.946 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:20:42.946 -08 000000077 INF: ===================Camera #0 Frame #261===================
17-02-28 20:20:42.993 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:42.999 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:20:42.999 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:20:42.999 -08 000000064 INF: ===================Camera #2 Frame #263===================
17-02-28 20:20:43.066 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:43.116 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:20:43.116 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:20:43.116 -08 000000077 INF: ===================Camera #0 Frame #268===================
17-02-28 20:20:43.129 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:43.130 -08 000000038 INF: Y Motor: Unshifted Position: 1220469
17-02-28 20:20:43.170 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:20:43.170 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:20:43.170 -08 000000064 INF: ===================Camera #2 Frame #270===================
17-02-28 20:20:43.180 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:43.252 -08 000000086 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:43.252 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:43.254 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:43.255 -08 000000089 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:43.255 -08 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:43.255 -08 000000089 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:43.255 -08 000000089 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:43.255 -08 000000089 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:43.255 -08 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:43.255 -08 000000089 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:43.255 -08 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:43.255 -08 000000045 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:43.263 -08 000000045 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:43.288 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:43.288 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:43.288 -08 000000077 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:43.301 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:43.302 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:43.304 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:43.379 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:43.441 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:43.442 -08 000000038 INF: Y Motor: Unshifted Position: 1017453
17-02-28 20:20:43.463 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:43.463 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:43.463 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:43.463 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:43.463 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:20:43.469 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:43.470 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:43.492 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:43.493 -08 000000077 INF: ======================================
17-02-28 20:20:43.625 -08 000000060 INF: FPGA: Recv EX1MV
17-02-28 20:20:43.625 -08 000000089 INF: Excitation Filter 1: Moved 107 steps in 369.9401 ms
17-02-28 20:20:43.625 -08 000000089 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.0605 ms
17-02-28 20:20:43.625 -08 000000089 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.1312 ms
17-02-28 20:20:43.625 -08 000000089 INF: ======================================
17-02-28 20:20:43.628 -08 000000038 INF: Y Motor: Unshifted Position: 984281
17-02-28 20:20:43.628 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:43.628 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:43.668 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:43.668 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:20:43.690 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:20:43.690 -08 000000045 INF: Excitation Filter 2: Moved 107 steps in 434.723 ms
17-02-28 20:20:43.690 -08 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 434.8541 ms
17-02-28 20:20:43.690 -08 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 434.9393 ms
17-02-28 20:20:43.690 -08 000000045 INF: ======================================
17-02-28 20:20:43.691 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:43.691 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:43.692 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:43.692 -08 000000038 INF: Y Motor: Moved to 14.8428 after 7863 ms
17-02-28 20:20:43.692 -08 000000038 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:43.693 -08 000000108 INF: ======================================
17-02-28 20:20:43.703 -08 000000064 INF: ======================================
17-02-28 20:20:43.705 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:20:43.706 -08 000000035 INF: ======================================
17-02-28 20:20:43.753 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:43.754 -08 000000038 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:43.754 -08 000000038 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:43.754 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:43.816 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:43.816 -08 000000038 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:43.816 -08 000000038 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:43.878 -08 000000038 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:43.940 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:44.002 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.002 -08 000000038 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:44.002 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:44.003 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:44.064 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.064 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:44.064 -08 000000038 INF: ======================================
17-02-28 20:20:44.066 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:44.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:44.067 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.068 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:44.124 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:44.124 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:44.190 -08 000000064 INF: FPGA: Recv TDIYERD 1484283
17-02-28 20:20:44.190 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:44.251 -08 000000086 INF: FPGA: Recv ZADCR 18952
17-02-28 20:20:44.251 -08 000000018 INF: At scan end Y pos = 14.843 and Z pos = -0.073. Y moved -48.539 mm
17-02-28 20:20:44.251 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:44.313 -08 000000010 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:44.313 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:44.313 -08 000000018 INF: TDIScan finished after 11831.6951 ms
17-02-28 20:20:44.313 -08 000000018 INF: Image[0]: Y should trigger at 63.382 mm, 2nd row was at 64.291 mm (error = 0.909 mm)
17-02-28 20:20:44.313 -08 000000018 INF: Image[2]: Y should trigger at 63.382 mm, 2nd row was at 64.291 mm (error = 0.909 mm)
17-02-28 20:20:44.314 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:44.315 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.348 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.848 um
17-02-28 20:20:44.349 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.350 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:44.374 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:44.375 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:44.375 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:44.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:44.375 -08 000000052 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:44.375 -08 000000108 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:44.376 -08 000000105 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:44.376 -08 000000042 INF: WaitCommand(5000) start
17-02-28 20:20:44.376 -08 000000050 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:44.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:20:44.376 -08 000000105 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:44.376 -08 000000105 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:44.376 -08 000000050 INF: ======================================
17-02-28 20:20:44.376 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:44.376 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:44.376 -08 000000108 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:44.376 -08 000000108 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:44.377 -08 000000072 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:44.380 -08 000000045 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:44.405 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:44.406 -08 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:44.406 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.406 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.407 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.407 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.407 -08 000000010 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.407 -08 000000038 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.407 -08 000000066 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.407 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:44.436 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:44.436 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:20:44.436 -08 000000072 INF: FPGA: Xmit ZDACW 19408\n
17-02-28 20:20:44.436 -08 000000105 INF: ======================================
17-02-28 20:20:44.438 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.438 -08 000000108 INF: ======================================
17-02-28 20:20:44.481 -08 000000010 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.481 -08 000000038 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.481 -08 000000066 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.481 -08 000000039 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:44.503 -08 000000075 INF: FPGA: Recv ZDACW 
17-02-28 20:20:44.503 -08 000000072 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:44.504 -08 000000072 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:44.564 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:20:44.565 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:44.566 -08 000000072 INF: ======================================
17-02-28 20:20:44.632 -08 000000010 INF: LFT found best fwhm score 2.000258 in 151 ms
17-02-28 20:20:44.632 -08 000000038 INF: LFT found best fwhm score 2.000108 in 151 ms
17-02-28 20:20:44.632 -08 000000010 INF: LFT found good score at index 1669 with fwhm value 2.000258. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.632 -08 000000038 INF: LFT found good score at index 1733 with fwhm value 2.000108. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.632 -08 000000039 INF: LFT found best fwhm score 2.000017 in 151 ms
17-02-28 20:20:44.632 -08 000000039 INF: LFT found good score at index 7561 with fwhm value 2.000017. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.632 -08 000000010 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.632 -08 000000038 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.633 -08 000000066 INF: LFT found best fwhm score 2.000284 in 151 ms
17-02-28 20:20:44.633 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.633 -08 000000066 INF: LFT found good score at index 3093 with fwhm value 2.000284. Next cycle, cycle 4 starting Z position for bottom surface is at -0.053 mm FC:A, C:3,L:7,B
17-02-28 20:20:44.633 -08 000000010 INF: ======================================
17-02-28 20:20:44.633 -08 000000066 INF: ===================LookupFocusTracking===================
17-02-28 20:20:44.633 -08 000000038 INF: ======================================
17-02-28 20:20:44.633 -08 000000039 INF: ======================================
17-02-28 20:20:44.633 -08 000000066 INF: ======================================
17-02-28 20:20:44.634 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:44.635 -08 000000045 INF: LFT weighted average best Z for bottom surface is at -0.054mm FC:A, C:3,L:7,B
17-02-28 20:20:44.635 -08 000000045 INF: ======================================
17-02-28 20:20:44.636 -08 000000052 INF: ======================================
17-02-28 20:20:44.637 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.638 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.639 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:44.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:44.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:44.640 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 22.15734 Y = 39.70494===================
17-02-28 20:20:44.641 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:20:44.641 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:20:44.663 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:20:44.663 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:44.664 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:44.664 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:44.664 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:44.664 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:44.664 -08 000000018 INF: Transformed XStagePosition from 23.26534 mm to 23.2898300830275 mm.
17-02-28 20:20:44.676 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4921857396849 mm.
17-02-28 20:20:44.676 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2921857396849 mm.
17-02-28 20:20:44.676 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3829357396848 mm.
17-02-28 20:20:44.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:44.679 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:44.680 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -74.0 um, section = G_1
17-02-28 20:20:44.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:44.682 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:44.698 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:20:44.698 -08 000000075 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:44.698 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:44.699 -08 000000025 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:44.699 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:20:44.699 -08 000000073 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:44.700 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:44.701 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:20:44.702 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:44.702 -08 000000036 INF: ===================Move X Motor without settling===================
17-02-28 20:20:44.702 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:44.702 -08 000000036 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:44.703 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:44.703 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:44.703 -08 000000058 INF: Y Motor: Moving to 64.4922 mm @25.000 mm/sec, started at 14.8428 mm
17-02-28 20:20:44.703 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:44.703 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:44.703 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:44.704 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:44.704 -08 000000038 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:44.704 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:44.705 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:44.705 -08 000000038 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:44.705 -08 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:44.705 -08 000000085 INF: ======================================
17-02-28 20:20:44.705 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.706 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:44.707 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:44.707 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:20:44.707 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:20:44.707 -08 000000085 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:44.708 -08 000000053 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:44.708 -08 000000085 INF: ======================================
17-02-28 20:20:44.708 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:44.708 -08 000000053 INF: ======================================
17-02-28 20:20:44.708 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:44.708 -08 000000105 INF: ======================================
17-02-28 20:20:44.709 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:44.709 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":7,"Tile":2103,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF213","HCSMMF244","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.709 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:44.710 -08 000000085 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:44.710 -08 000000064 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:44.710 -08 000000064 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:44.710 -08 000000085 INF: ======================================
17-02-28 20:20:44.710 -08 000000053 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:44.711 -08 000000064 INF: ======================================
17-02-28 20:20:44.711 -08 000000047 INF: ======================================
17-02-28 20:20:44.711 -08 000000053 INF: ======================================
17-02-28 20:20:44.712 -08 000000010 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:44.713 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:44.713 -08 000000010 INF: ======================================
17-02-28 20:20:44.714 -08 000000030 INF: ======================================
17-02-28 20:20:44.730 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:44.731 -08 000000105 INF: ======================================
17-02-28 20:20:44.733 -08 000000038 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:44.734 -08 000000038 INF: ======================================
17-02-28 20:20:44.735 -08 000000075 INF: ======================================
17-02-28 20:20:44.750 -08 000000064 INF: FPGA: Recv ZSEL 
17-02-28 20:20:44.752 -08 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:44.752 -08 000000036 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:44.752 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.752 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:44.752 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:44.752 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:44.753 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:20:44.808 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":7,"Tile":2101,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF218","HCSMMF257","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.815 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:20:44.816 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:44.817 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:44.817 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Moving to 23.2898 mm @15.000 mm/sec, started at 22.1885 mm
17-02-28 20:20:44.817 -08 000000036 INF: X Motor: Xmit MA -14627\n
17-02-28 20:20:44.820 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:20:44.821 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.826 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:20:44.827 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:20:44.827 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:20:44.832 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":7,"Tile":2104,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF221","HCSMMF197","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.842 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":7,"Tile":2105,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF216","HCSMMF266","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.843 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":7,"Tile":2106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF206","HCSMMF268","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.868 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":7,"Tile":2102,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF249","HCSMMF278","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.869 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":7,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF274","HCSMMF240","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.870 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":7,"Tile":2110,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF181","HCSMMF183","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.872 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":7,"Tile":2112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF241","HCSMMF231","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.873 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":7,"Tile":2107,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF261","HCSMMF263","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.874 -08 000000081 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:44.874 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.874 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":7,"Tile":2113,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF193","HCSMMF248","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.875 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":7,"Tile":2109,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF179","HCSMMF287","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.876 -08 000000036 INF: X Motor: Recv MA -14627\r\n>
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:44.876 -08 000000036 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Set target position to 5949219 encoder counts
17-02-28 20:20:44.876 -08 000000058 INF: Y Motor: Xmit s r0xca 5949219\r
17-02-28 20:20:44.876 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:20:44.876 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":7,"Tile":2111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF177","HCSMMF252","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.876 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:44.877 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":7,"Tile":2114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF202","HCSMMF271","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.878 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:20:44.878 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":7,"Tile":2116,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF205","HCSMMF280","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.878 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:20:44.878 -08 000000087 INF: Z Motor: Arming to move to -0.0340 mm
17-02-28 20:20:44.878 -08 000000087 INF: FPGA: Xmit ZYT 6429219 4\n
17-02-28 20:20:44.879 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":7,"Tile":2115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF255","HCSMMF190","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.880 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":7,"Tile":2117,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF192","HCSMMF242","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.881 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":7,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF282","HCSMMF277","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.881 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":7,"Tile":2120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF209","HCSMMF243","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.882 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":7,"Tile":2118,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF189","HCSMMF279","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.883 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":7,"Tile":2121,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF229","HCSMMF225","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.884 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":7,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF269","HCSMMF224","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.885 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":7,"Tile":2122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF230","HCSMMF186","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.886 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":7,"Tile":2124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF200","HCSMMF286","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.887 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":7,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF272","HCSMMF258","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.888 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":7,"Tile":2125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF256","HCSMMF211","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.889 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":7,"Tile":2127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF276","HCSMMF264","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.890 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":7,"Tile":2126,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF223","HCSMMF253","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:44.892 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:44.898 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:44.938 -08 000000081 INF: FPGA: Recv ZYT 
17-02-28 20:20:44.938 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1484281 enc / 14.843 mm / ) = 6429219 enc / 64.292 mm
17-02-28 20:20:44.938 -08 000000087 INF: FPGA: Xmit ZARM 8923\n
17-02-28 20:20:44.939 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:44.939 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:20:44.939 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:44.994 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:44.994 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:44.999 -08 000000108 INF: FPGA: Recv ZARM
17-02-28 20:20:44.999 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.1254 ms
17-02-28 20:20:44.999 -08 000000087 INF: Z Motor: ArmAbsStepped took 120.6609 ms
17-02-28 20:20:44.999 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:20:45.001 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:45.001 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:45.001 -08 000000058 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:20:45.001 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.002 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:20:45.003 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:45.004 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:20:45.004 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:20:45.006 -08 000000087 INF: ======================================
17-02-28 20:20:45.030 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.036 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:45.125 -08 000000058 INF: Y Motor: Unshifted Position: 1065656
17-02-28 20:20:45.125 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.131 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:45.175 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.213 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.219 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:45.299 -08 000000082 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:45.300 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:45.300 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:45.303 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.315 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:45.317 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:20:45.322 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:45.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:45.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 4 of 5 seconds left===================
17-02-28 20:20:45.439 -08 000000058 INF: Y Motor: Unshifted Position: 1773453
17-02-28 20:20:45.489 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.500 -08 000000036 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:45.562 -08 000000036 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:45.562 -08 000000036 INF: X Motor: Moved to 23.2896 after 686 ms
17-02-28 20:20:45.562 -08 000000036 INF: ======================================
17-02-28 20:20:45.611 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:45.612 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.752 -08 000000058 INF: Y Motor: Unshifted Position: 2549292
17-02-28 20:20:45.802 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.916 -08 000000082 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:20:45.916 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:20:45.916 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:20:45.926 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:45.931 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:20:45.933 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:20:45.934 -08 000000082 INF: ======================================
17-02-28 20:20:45.935 -08 000000073 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:20:45.936 -08 000000073 INF: ======================================
17-02-28 20:20:46.064 -08 000000058 INF: Y Motor: Unshifted Position: 3329250
17-02-28 20:20:46.114 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.238 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.375 -08 000000058 INF: Y Motor: Unshifted Position: 4115149
17-02-28 20:20:46.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:46.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 3 of 5 seconds left===================
17-02-28 20:20:46.425 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.551 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.691 -08 000000058 INF: Y Motor: Unshifted Position: 4890086
17-02-28 20:20:46.741 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.863 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:46.998 -08 000000058 INF: Y Motor: Unshifted Position: 5672172
17-02-28 20:20:47.048 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:47.175 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:47.316 -08 000000058 INF: Y Motor: Unshifted Position: 5949220
17-02-28 20:20:47.316 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:47.316 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:47.375 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:47.375 -08 000000058 INF: Y Motor: Moved to 64.4922 after 2373 ms
17-02-28 20:20:47.375 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:47.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:47.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 2 of 5 seconds left===================
17-02-28 20:20:47.437 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:20:47.437 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:47.437 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:47.499 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:47.499 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:47.499 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:47.561 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:47.623 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:47.685 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:47.685 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:47.685 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:47.748 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:20:47.748 -08 000000058 INF: ======================================
17-02-28 20:20:47.750 -08 000000025 INF: ===================Move X,Y===================
17-02-28 20:20:47.752 -08 000000025 INF: ======================================
17-02-28 20:20:47.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:47.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:47.755 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:20:47.755 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:20:47.809 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:47.809 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:20:47.869 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:20:47.869 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:20:47.870 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:47.870 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:47.935 -08 000000073 INF: FPGA: Recv TDIYERD 6449220
17-02-28 20:20:47.935 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449220 counts (64.492 mm)
17-02-28 20:20:47.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:47.936 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:47.937 -08 000000038 INF: ===================Set YMotor gains for scans===================
17-02-28 20:20:47.937 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:47.937 -08 000000038 INF: ======================================
17-02-28 20:20:47.938 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:47.938 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:20:47.938 -08 000000045 INF: FPGA: Xmit TDIYPOS 6338294\n
17-02-28 20:20:47.996 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:20:47.996 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:47.998 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:20:47.998 -08 000000045 INF: FPGA: Xmit TDIYARM3 139264 6429219 1 1\n
17-02-28 20:20:48.058 -08 000000072 INF: FPGA: Recv TDIYARM3
17-02-28 20:20:48.058 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:20:48.060 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:20:48.061 -08 000000045 INF: ======================================
17-02-28 20:20:48.062 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:20:48.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:48.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.063 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.064 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.064 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:20:48.065 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:20:48.065 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:20:48.065 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:20:48.065 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:20:48.065 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:20:48.065 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:20:48.065 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:20:48.065 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:20:48.066 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:20:48.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:48.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 1 of 5 seconds left===================
17-02-28 20:20:48.446 -08 000000025 INF: FPGA: Recv EX2MV
17-02-28 20:20:48.446 -08 000000025 INF: FPGA: Recv EX1MV
17-02-28 20:20:48.446 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 381.1431 ms
17-02-28 20:20:48.446 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 381.0595 ms
17-02-28 20:20:48.446 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 381.299 ms
17-02-28 20:20:48.446 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 381.3751 ms
17-02-28 20:20:48.446 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 381.2857 ms
17-02-28 20:20:48.446 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 381.7673 ms
17-02-28 20:20:48.447 -08 000000050 INF: ======================================
17-02-28 20:20:48.447 -08 000000078 INF: ======================================
17-02-28 20:20:48.448 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:48.450 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:20:48.450 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:48.450 -08 000000105 INF: ===================FPGA Z Wait===================
17-02-28 20:20:48.450 -08 000000086 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:48.450 -08 000000086 INF: Y Motor: Moving to 14.8438 mm @6.500 mm/sec, started at 64.4922 mm
17-02-28 20:20:48.450 -08 000000086 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:48.450 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:48.451 -08 000000109 INF: ===================Camera TDI, Parallel===================
17-02-28 20:20:48.451 -08 000000073 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:20:48.451 -08 000000073 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:20:48.451 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:20:48.451 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:20:48.452 -08 000000105 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:20:48.453 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.453 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.454 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.454 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.513 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.513 -08 000000086 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:48.513 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:48.576 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.576 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:48.603 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.603 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.604 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.604 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Set target position to 984385 encoder counts
17-02-28 20:20:48.637 -08 000000086 INF: Y Motor: Xmit s r0xca 984385\r
17-02-28 20:20:48.699 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.699 -08 000000086 INF: Y Motor: Start the move command
17-02-28 20:20:48.699 -08 000000086 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:48.753 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.753 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.754 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:20:48.754 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:20:48.761 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:48.761 -08 000000086 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:20:48.761 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:48.821 -08 000000060 INF: FPGA: Recv ZWAIT 
17-02-28 20:20:48.822 -08 000000105 INF: ======================================
17-02-28 20:20:48.885 -08 000000086 INF: Y Motor: Unshifted Position: 5887364
17-02-28 20:20:48.903 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:20:48.903 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:48.903 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:20:48.904 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:20:48.904 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:20:48.904 -08 000000069 INF: ===================Camera #2 Frame #5===================
17-02-28 20:20:48.935 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.062 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.076 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:49.076 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:49.076 -08 000000085 INF: ===================Camera #0 Frame #11===================
17-02-28 20:20:49.078 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:20:49.078 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:20:49.078 -08 000000069 INF: ===================Camera #2 Frame #11===================
17-02-28 20:20:49.198 -08 000000086 INF: Y Motor: Unshifted Position: 5683691
17-02-28 20:20:49.244 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:20:49.244 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:20:49.244 -08 000000085 INF: ===================Camera #0 Frame #17===================
17-02-28 20:20:49.248 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.264 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:20:49.264 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:20:49.264 -08 000000069 INF: ===================Camera #2 Frame #18===================
17-02-28 20:20:49.372 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:49.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:49.377 -08 000000042 INF: WaitCommand(5000) end
17-02-28 20:20:49.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:49.417 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:20:49.417 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:20:49.417 -08 000000085 INF: ===================Camera #0 Frame #23===================
17-02-28 20:20:49.441 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:20:49.441 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:20:49.441 -08 000000069 INF: ===================Camera #2 Frame #24===================
17-02-28 20:20:49.476 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:20:49.510 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:20:49.510 -08 000000042 INF: Current Position of Pump is: 13440
17-02-28 20:20:49.511 -08 000000086 INF: Y Motor: Unshifted Position: 5480258
17-02-28 20:20:49.561 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.593 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:20:49.593 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:20:49.593 -08 000000085 INF: ===================Camera #0 Frame #30===================
17-02-28 20:20:49.610 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r
17-02-28 20:20:49.618 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:20:49.618 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:20:49.618 -08 000000069 INF: ===================Camera #2 Frame #31===================
17-02-28 20:20:49.685 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.696 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:20:49.696 -08 000000042 INF: Current Position of Pump is: 13440
17-02-28 20:20:49.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Dispensing port PortC===================
17-02-28 20:20:49.774 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:49.774 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:20:49.774 -08 000000085 INF: ===================Camera #0 Frame #37===================
17-02-28 20:20:49.792 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:20:49.792 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:20:49.792 -08 000000069 INF: ===================Camera #2 Frame #37===================
17-02-28 20:20:49.796 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V6400OD13440R\r
17-02-28 20:20:49.821 -08 000000086 INF: Y Motor: Unshifted Position: 5278528
17-02-28 20:20:49.871 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:49.885 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:49.946 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:20:49.946 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:20:49.946 -08 000000085 INF: ===================Camera #0 Frame #43===================
17-02-28 20:20:49.961 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:20:49.961 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:20:49.961 -08 000000069 INF: ===================Camera #2 Frame #43===================
17-02-28 20:20:49.985 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:49.998 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.072 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:50.115 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:20:50.115 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:20:50.115 -08 000000085 INF: ===================Camera #0 Frame #49===================
17-02-28 20:20:50.131 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:20:50.131 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:20:50.131 -08 000000069 INF: ===================Camera #2 Frame #50===================
17-02-28 20:20:50.135 -08 000000086 INF: Y Motor: Unshifted Position: 5074433
17-02-28 20:20:50.185 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.283 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:20:50.283 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:20:50.283 -08 000000085 INF: ===================Camera #0 Frame #55===================
17-02-28 20:20:50.304 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:20:50.304 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:20:50.304 -08 000000069 INF: ===================Camera #2 Frame #56===================
17-02-28 20:20:50.309 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.322 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:50.382 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:50.445 -08 000000086 INF: Y Motor: Unshifted Position: 4872937
17-02-28 20:20:50.453 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:20:50.453 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:20:50.453 -08 000000085 INF: ===================Camera #0 Frame #62===================
17-02-28 20:20:50.476 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:20:50.476 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:20:50.476 -08 000000069 INF: ===================Camera #2 Frame #62===================
17-02-28 20:20:50.495 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.622 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.632 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:50.635 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:20:50.635 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:20:50.635 -08 000000085 INF: ===================Camera #0 Frame #68===================
17-02-28 20:20:50.654 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:20:50.654 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:20:50.654 -08 000000069 INF: ===================Camera #2 Frame #69===================
17-02-28 20:20:50.695 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:50.758 -08 000000086 INF: Y Motor: Unshifted Position: 4669272
17-02-28 20:20:50.808 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.811 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:20:50.811 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:20:50.811 -08 000000085 INF: ===================Camera #0 Frame #75===================
17-02-28 20:20:50.826 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:20:50.826 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:20:50.826 -08 000000069 INF: ===================Camera #2 Frame #75===================
17-02-28 20:20:50.932 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:50.945 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:50.993 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:20:50.993 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:20:50.993 -08 000000085 INF: ===================Camera #0 Frame #81===================
17-02-28 20:20:50.996 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:20:50.996 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:20:50.996 -08 000000069 INF: ===================Camera #2 Frame #82===================
17-02-28 20:20:51.008 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:51.071 -08 000000086 INF: Y Motor: Unshifted Position: 4465807
17-02-28 20:20:51.121 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.161 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:20:51.161 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:20:51.161 -08 000000085 INF: ===================Camera #0 Frame #88===================
17-02-28 20:20:51.170 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:20:51.170 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:20:51.170 -08 000000069 INF: ===================Camera #2 Frame #88===================
17-02-28 20:20:51.245 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.258 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:51.318 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:51.333 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:20:51.333 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:20:51.333 -08 000000085 INF: ===================Camera #0 Frame #94===================
17-02-28 20:20:51.339 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:20:51.339 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:20:51.339 -08 000000069 INF: ===================Camera #2 Frame #94===================
17-02-28 20:20:51.382 -08 000000086 INF: Y Motor: Unshifted Position: 4264097
17-02-28 20:20:51.432 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.501 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:20:51.501 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:20:51.501 -08 000000085 INF: ===================Camera #0 Frame #100===================
17-02-28 20:20:51.508 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:20:51.508 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:20:51.508 -08 000000069 INF: ===================Camera #2 Frame #100===================
17-02-28 20:20:51.558 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.568 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:51.631 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:51.670 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:20:51.670 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:20:51.670 -08 000000085 INF: ===================Camera #0 Frame #106===================
17-02-28 20:20:51.677 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:20:51.677 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:20:51.677 -08 000000069 INF: ===================Camera #2 Frame #107===================
17-02-28 20:20:51.694 -08 000000086 INF: Y Motor: Unshifted Position: 4059985
17-02-28 20:20:51.744 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.839 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:20:51.839 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:20:51.839 -08 000000085 INF: ===================Camera #0 Frame #113===================
17-02-28 20:20:51.849 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:20:51.849 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:20:51.849 -08 000000069 INF: ===================Camera #2 Frame #113===================
17-02-28 20:20:51.868 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:51.881 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:51.944 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:52.006 -08 000000086 INF: Y Motor: Unshifted Position: 3856972
17-02-28 20:20:52.011 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:20:52.011 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:20:52.011 -08 000000085 INF: ===================Camera #0 Frame #119===================
17-02-28 20:20:52.019 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:20:52.019 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:20:52.019 -08 000000069 INF: ===================Camera #2 Frame #119===================
17-02-28 20:20:52.056 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.180 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:20:52.180 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:20:52.180 -08 000000085 INF: ===================Camera #0 Frame #125===================
17-02-28 20:20:52.182 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.189 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:20:52.189 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:20:52.189 -08 000000069 INF: ===================Camera #2 Frame #125===================
17-02-28 20:20:52.194 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:52.256 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:52.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:20:52.256 -08 000000042 INF: KloehnPump B (KLOEHNB): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:20:52.321 -08 000000086 INF: Y Motor: Unshifted Position: 3653954
17-02-28 20:20:52.349 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:20:52.349 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:20:52.349 -08 000000085 INF: ===================Camera #0 Frame #131===================
17-02-28 20:20:52.359 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:20:52.359 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:20:52.359 -08 000000069 INF: ===================Camera #2 Frame #132===================
17-02-28 20:20:52.371 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.493 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.517 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:20:52.517 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:20:52.517 -08 000000085 INF: ===================Camera #0 Frame #138===================
17-02-28 20:20:52.531 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:20:52.531 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:20:52.531 -08 000000069 INF: ===================Camera #2 Frame #138===================
17-02-28 20:20:52.631 -08 000000086 INF: Y Motor: Unshifted Position: 3452452
17-02-28 20:20:52.681 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.688 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:20:52.688 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:20:52.688 -08 000000085 INF: ===================Camera #0 Frame #144===================
17-02-28 20:20:52.700 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:20:52.700 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:20:52.700 -08 000000069 INF: ===================Camera #2 Frame #144===================
17-02-28 20:20:52.806 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:52.856 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:20:52.856 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:20:52.856 -08 000000085 INF: ===================Camera #0 Frame #150===================
17-02-28 20:20:52.869 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:20:52.869 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:20:52.869 -08 000000069 INF: ===================Camera #2 Frame #151===================
17-02-28 20:20:52.942 -08 000000086 INF: Y Motor: Unshifted Position: 3248789
17-02-28 20:20:52.992 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.025 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:20:53.025 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:20:53.025 -08 000000085 INF: ===================Camera #0 Frame #156===================
17-02-28 20:20:53.041 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:20:53.041 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:20:53.041 -08 000000069 INF: ===================Camera #2 Frame #157===================
17-02-28 20:20:53.116 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.193 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:20:53.193 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:20:53.193 -08 000000085 INF: ===================Camera #0 Frame #162===================
17-02-28 20:20:53.210 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:20:53.210 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:20:53.210 -08 000000069 INF: ===================Camera #2 Frame #163===================
17-02-28 20:20:53.255 -08 000000086 INF: Y Motor: Unshifted Position: 3045127
17-02-28 20:20:53.305 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.356 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r
17-02-28 20:20:53.361 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:20:53.361 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:20:53.361 -08 000000085 INF: ===================Camera #0 Frame #169===================
17-02-28 20:20:53.379 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:20:53.379 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:20:53.379 -08 000000069 INF: ===================Camera #2 Frame #169===================
17-02-28 20:20:53.429 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.440 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:53.532 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:20:53.532 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:20:53.532 -08 000000085 INF: ===================Camera #0 Frame #175===================
17-02-28 20:20:53.540 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:53.548 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:20:53.548 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:20:53.548 -08 000000069 INF: ===================Camera #2 Frame #176===================
17-02-28 20:20:53.565 -08 000000086 INF: Y Motor: Unshifted Position: 2843627
17-02-28 20:20:53.615 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.626 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:20:53.700 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:20:53.700 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:20:53.700 -08 000000085 INF: ===================Camera #0 Frame #181===================
17-02-28 20:20:53.720 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:20:53.720 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:20:53.720 -08 000000069 INF: ===================Camera #2 Frame #182===================
17-02-28 20:20:53.742 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.868 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:20:53.868 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:20:53.868 -08 000000085 INF: ===================Camera #0 Frame #187===================
17-02-28 20:20:53.876 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r
17-02-28 20:20:53.878 -08 000000086 INF: Y Motor: Unshifted Position: 2640180
17-02-28 20:20:53.889 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:20:53.889 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:20:53.889 -08 000000069 INF: ===================Camera #2 Frame #188===================
17-02-28 20:20:53.928 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:53.939 -08 000000042 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:20:53.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:53.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Closing shutoff valve===================
17-02-28 20:20:54.036 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:20:54.036 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:20:54.036 -08 000000085 INF: ===================Camera #0 Frame #193===================
17-02-28 20:20:54.053 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.058 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:20:54.058 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:20:54.058 -08 000000069 INF: ===================Camera #2 Frame #194===================
17-02-28 20:20:54.191 -08 000000086 INF: Y Motor: Unshifted Position: 2435870
17-02-28 20:20:54.204 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:20:54.204 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:20:54.204 -08 000000085 INF: ===================Camera #0 Frame #200===================
17-02-28 20:20:54.227 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:20:54.227 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:20:54.227 -08 000000069 INF: ===================Camera #2 Frame #201===================
17-02-28 20:20:54.241 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.312 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:20:54.365 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.375 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:20:54.375 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:20:54.376 -08 000000085 INF: ===================Camera #0 Frame #206===================
17-02-28 20:20:54.399 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:20:54.399 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:20:54.399 -08 000000069 INF: ===================Camera #2 Frame #207===================
17-02-28 20:20:54.501 -08 000000086 INF: Y Motor: Unshifted Position: 2233716
17-02-28 20:20:54.544 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:20:54.544 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:20:54.544 -08 000000085 INF: ===================Camera #0 Frame #212===================
17-02-28 20:20:54.551 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.568 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:20:54.568 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:20:54.568 -08 000000069 INF: ===================Camera #2 Frame #213===================
17-02-28 20:20:54.678 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.712 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:20:54.712 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:20:54.712 -08 000000085 INF: ===================Camera #0 Frame #218===================
17-02-28 20:20:54.737 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:20:54.737 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:20:54.737 -08 000000069 INF: ===================Camera #2 Frame #219===================
17-02-28 20:20:54.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.812 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:20:54.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.813 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.814 -08 000000086 INF: Y Motor: Unshifted Position: 2031350
17-02-28 20:20:54.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Resuming Chemistry===================
17-02-28 20:20:54.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:54.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:20:54.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:20:54.864 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:54.880 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:20:54.880 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:20:54.880 -08 000000085 INF: ===================Camera #0 Frame #225===================
17-02-28 20:20:54.906 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:20:54.906 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:20:54.906 -08 000000069 INF: ===================Camera #2 Frame #226===================
17-02-28 20:20:54.988 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.051 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:20:55.051 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:20:55.051 -08 000000085 INF: ===================Camera #0 Frame #231===================
17-02-28 20:20:55.078 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:20:55.078 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:20:55.078 -08 000000069 INF: ===================Camera #2 Frame #232===================
17-02-28 20:20:55.127 -08 000000086 INF: Y Motor: Unshifted Position: 1827893
17-02-28 20:20:55.177 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.219 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:20:55.219 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:20:55.219 -08 000000085 INF: ===================Camera #0 Frame #237===================
17-02-28 20:20:55.248 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:20:55.248 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:20:55.248 -08 000000069 INF: ===================Camera #2 Frame #238===================
17-02-28 20:20:55.301 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.387 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:20:55.387 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:20:55.387 -08 000000085 INF: ===================Camera #0 Frame #243===================
17-02-28 20:20:55.417 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:20:55.417 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:20:55.417 -08 000000069 INF: ===================Camera #2 Frame #244===================
17-02-28 20:20:55.437 -08 000000086 INF: Y Motor: Unshifted Position: 1626184
17-02-28 20:20:55.487 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.555 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:20:55.555 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:20:55.555 -08 000000085 INF: ===================Camera #0 Frame #249===================
17-02-28 20:20:55.586 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:20:55.586 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:20:55.586 -08 000000069 INF: ===================Camera #2 Frame #251===================
17-02-28 20:20:55.614 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.724 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:20:55.724 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:20:55.724 -08 000000085 INF: ===================Camera #0 Frame #256===================
17-02-28 20:20:55.750 -08 000000086 INF: Y Motor: Unshifted Position: 1422726
17-02-28 20:20:55.758 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:20:55.758 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:20:55.758 -08 000000069 INF: ===================Camera #2 Frame #257===================
17-02-28 20:20:55.800 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.895 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:20:55.895 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:20:55.895 -08 000000085 INF: ===================Camera #0 Frame #262===================
17-02-28 20:20:55.924 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:55.927 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:20:55.927 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:20:55.927 -08 000000069 INF: ===================Camera #2 Frame #263===================
17-02-28 20:20:56.061 -08 000000086 INF: Y Motor: Unshifted Position: 1220354
17-02-28 20:20:56.065 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:20:56.065 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:20:56.065 -08 000000085 INF: ===================Camera #0 Frame #268===================
17-02-28 20:20:56.097 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:20:56.097 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:20:56.097 -08 000000069 INF: ===================Camera #2 Frame #269===================
17-02-28 20:20:56.111 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:56.186 -08 000000035 INF: FPGA: Recv TDIYWAIT
17-02-28 20:20:56.186 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:56.188 -08 000000073 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:20:56.189 -08 000000105 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:20:56.189 -08 000000075 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:20:56.189 -08 000000105 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:20:56.189 -08 000000105 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:20:56.189 -08 000000105 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:20:56.189 -08 000000075 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:20:56.189 -08 000000105 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:20:56.189 -08 000000075 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:20:56.189 -08 000000075 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:20:56.190 -08 000000075 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:20:56.235 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:56.235 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:56.235 -08 000000085 INF: ===================Camera #0 Frame #272===================
17-02-28 20:20:56.238 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:56.249 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:56.250 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:56.377 -08 000000086 INF: Y Motor: Unshifted Position: 1016908
17-02-28 20:20:56.384 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:20:56.384 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:20:56.384 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:20:56.384 -08 000000069 INF: ===================Camera #2 Frame #272===================
17-02-28 20:20:56.384 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:20:56.393 -08 000000069 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:20:56.394 -08 000000069 INF: ===================CameraTDI Cleanup===================
17-02-28 20:20:56.414 -08 000000085 INF: ======================================
17-02-28 20:20:56.427 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:56.559 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:20:56.559 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:20:56.559 -08 000000075 INF: Excitation Filter 2: Moved 107 steps in 368.7345 ms
17-02-28 20:20:56.559 -08 000000075 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.8726 ms
17-02-28 20:20:56.559 -08 000000075 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.9774 ms
17-02-28 20:20:56.559 -08 000000105 INF: Excitation Filter 1: Moved 107 steps in 368.9315 ms
17-02-28 20:20:56.559 -08 000000105 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.1394 ms
17-02-28 20:20:56.559 -08 000000105 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.366 ms
17-02-28 20:20:56.559 -08 000000075 INF: ======================================
17-02-28 20:20:56.559 -08 000000105 INF: ======================================
17-02-28 20:20:56.561 -08 000000086 INF: Y Motor: Unshifted Position: 984384
17-02-28 20:20:56.561 -08 000000086 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:20:56.561 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:56.561 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:20:56.562 -08 000000069 INF: Camera #2 ReleaseBuffer
17-02-28 20:20:56.562 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:20:56.562 -08 000000073 INF: ======================================
17-02-28 20:20:56.598 -08 000000069 INF: ======================================
17-02-28 20:20:56.599 -08 000000109 INF: ===================Camera TDI===================
17-02-28 20:20:56.600 -08 000000109 INF: ======================================
17-02-28 20:20:56.623 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:56.623 -08 000000086 INF: Y Motor: Moved to 14.8438 after 7861 ms
17-02-28 20:20:56.623 -08 000000086 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:20:56.640 -08 000000060 INF: RunCopyService queue size at 2/28/2017 8:20:56 PM is 2
17-02-28 20:20:56.688 -08 000000086 INF: Y Motor: Recv v 4097\r
17-02-28 20:20:56.688 -08 000000086 INF: Y Motor: Status After move finished OK:
17-02-28 20:20:56.688 -08 000000086 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:56.750 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:56.750 -08 000000086 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:56.750 -08 000000086 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: Recv v 134217728\r
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:20:56.812 -08 000000086 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: Recv v 0\r
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:20:56.874 -08 000000086 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:56.936 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:56.936 -08 000000086 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:20:56.936 -08 000000086 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:56.998 -08 000000086 INF: Y Motor: Recv ok\r
17-02-28 20:20:56.998 -08 000000086 INF: ======================================
17-02-28 20:20:56.999 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:57.000 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:20:57.001 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.001 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:20:57.058 -08 000000025 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:20:57.058 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:20:57.124 -08 000000053 INF: FPGA: Recv TDIYERD 1484386
17-02-28 20:20:57.124 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:20:57.185 -08 000000085 INF: FPGA: Recv ZADCR 19192
17-02-28 20:20:57.185 -08 000000018 INF: At scan end Y pos = 14.844 and Z pos = -0.074. Y moved -48.539 mm
17-02-28 20:20:57.185 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:20:57.249 -08 000000105 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:20:57.250 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:20:57.250 -08 000000018 INF: TDIScan finished after 12583.9408 ms
17-02-28 20:20:57.250 -08 000000018 INF: Image[0]: Y should trigger at 63.383 mm, 2nd row was at 64.292 mm (error = 0.909 mm)
17-02-28 20:20:57.250 -08 000000018 INF: Image[2]: Y should trigger at 63.383 mm, 2nd row was at 64.292 mm (error = 0.909 mm)
17-02-28 20:20:57.252 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.286 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.833 um
17-02-28 20:20:57.286 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.287 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:20:57.309 -08 000000030 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:20:57.310 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.310 -08 000000109 INF: ===================Dither Clean Up Command===================
17-02-28 20:20:57.310 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:20:57.310 -08 000000034 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:20:57.310 -08 000000050 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:20:57.311 -08 000000034 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:57.311 -08 000000034 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:57.311 -08 000000039 INF: ======================================
17-02-28 20:20:57.311 -08 000000050 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:20:57.311 -08 000000050 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:20:57.311 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:57.311 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:57.312 -08 000000066 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:20:57.314 -08 000000069 INF: ===================LFT:Extracting coords===================
17-02-28 20:20:57.340 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:57.340 -08 000000069 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:20:57.341 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.341 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.341 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.342 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.342 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.342 -08 000000073 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.342 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.342 -08 000000064 INF: ===================Lookup Focus Tracking===================
17-02-28 20:20:57.371 -08 000000075 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:57.371 -08 000000075 INF: FPGA: Recv ZSEL 
17-02-28 20:20:57.371 -08 000000066 INF: FPGA: Xmit ZDACW 19408\n
17-02-28 20:20:57.371 -08 000000050 INF: ======================================
17-02-28 20:20:57.375 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:20:57.375 -08 000000034 INF: ======================================
17-02-28 20:20:57.416 -08 000000082 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.416 -08 000000073 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.416 -08 000000105 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.417 -08 000000064 INF: FC:A, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:20:57.433 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:20:57.434 -08 000000066 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:20:57.434 -08 000000066 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:20:57.495 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:20:57.495 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:20:57.496 -08 000000066 INF: ======================================
17-02-28 20:20:57.567 -08 000000073 INF: LFT found best fwhm score 2.000098 in 151 ms
17-02-28 20:20:57.567 -08 000000073 INF: LFT found good score at index 3193 with fwhm value 2.000098. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.567 -08 000000105 INF: LFT found best fwhm score 2 in 151 ms
17-02-28 20:20:57.567 -08 000000082 INF: LFT found best fwhm score 2.000872 in 151 ms
17-02-28 20:20:57.567 -08 000000105 INF: LFT found good score at index 6745 with fwhm value 2. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.567 -08 000000082 INF: LFT found good score at index 1157 with fwhm value 2.000872. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.567 -08 000000073 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.568 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.568 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.568 -08 000000073 INF: ======================================
17-02-28 20:20:57.568 -08 000000082 INF: ======================================
17-02-28 20:20:57.568 -08 000000105 INF: ======================================
17-02-28 20:20:57.569 -08 000000064 INF: LFT found best fwhm score 2.000385 in 152 ms
17-02-28 20:20:57.569 -08 000000064 INF: LFT found good score at index 3185 with fwhm value 2.000385. Next cycle, cycle 4 starting Z position for bottom surface is at -0.054 mm FC:A, C:3,L:7,B
17-02-28 20:20:57.570 -08 000000064 INF: ===================LookupFocusTracking===================
17-02-28 20:20:57.570 -08 000000064 INF: ======================================
17-02-28 20:20:57.571 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:20:57.572 -08 000000069 INF: LFT weighted average best Z for bottom surface is at -0.054mm FC:A, C:3,L:7,B
17-02-28 20:20:57.572 -08 000000069 INF: ======================================
17-02-28 20:20:57.574 -08 000000109 INF: ======================================
17-02-28 20:20:57.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.575 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.576 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:20:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:20:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:57.577 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 23.26534 Y = 39.70494===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:20:57.578 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:20:57.601 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:20:57.601 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:57.601 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:57.601 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:57.602 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:20:57.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:20:57.602 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:20:57.648 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":7,"Tile":2201,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF223","HCSMMF184","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.652 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.652 -08 000000018 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:20:57.652 -08 000000018 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:20:57.750 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:20:57.750 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.751 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:20:57.751 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.752 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:57.754 -08 000000073 INF: ===================Move Tilt Motor 1===================
17-02-28 20:20:57.754 -08 000000073 INF: Tilt Motor 1: Moving to 5.0845 mm, started at 5.1788 mm, delta = -0.0944 mm
17-02-28 20:20:57.754 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:57.756 -08 000000085 INF: ===================Move Tilt Motor 2===================
17-02-28 20:20:57.756 -08 000000085 INF: Tilt Motor 2: Moving to 5.2991 mm, started at 5.2431 mm, delta = 0.0560 mm
17-02-28 20:20:57.756 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:57.758 -08 000000089 INF: ===================Move Tilt Motor 3===================
17-02-28 20:20:57.758 -08 000000089 INF: Tilt Motor 3: Moving to 5.3257 mm, started at 5.2708 mm, delta = 0.0550 mm
17-02-28 20:20:57.758 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:57.849 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":7,"Tile":2202,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF264","HCSMMF199","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.849 -08 000000075 INF: FPGA: Recv T1RD 20388
17-02-28 20:20:57.849 -08 000000075 INF: FPGA: Recv T2RD 20642
17-02-28 20:20:57.849 -08 000000075 INF: FPGA: Recv T3RD 20750
17-02-28 20:20:57.850 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3440 + 2/6
17-02-28 20:20:57.850 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3458 + 2/6
17-02-28 20:20:57.850 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3398 + 0/6
17-02-28 20:20:57.850 -08 000000073 INF: Tilt Motor 1: Moving to 20018 encoder counts
17-02-28 20:20:57.850 -08 000000089 INF: Tilt Motor 3: Moving to 20967 encoder counts
17-02-28 20:20:57.850 -08 000000073 INF: FPGA: Xmit T1MOVETO 20018\n
17-02-28 20:20:57.850 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":7,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF208","HCSMMF236","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.851 -08 000000085 INF: Tilt Motor 2: Moving to 20862 encoder counts
17-02-28 20:20:57.851 -08 000000085 INF: FPGA: Xmit T2MOVETO 20862\n
17-02-28 20:20:57.852 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":7,"Tile":2207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF193","HCSMMF231","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.853 -08 000000089 INF: FPGA: Xmit T3MOVETO 20967\n
17-02-28 20:20:57.854 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":7,"Tile":2204,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF196","HCSMMF256","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.855 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":7,"Tile":2211,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF209","HCSMMF243","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.857 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":7,"Tile":2210,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF260","HCSMMF203","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.858 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":7,"Tile":2209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF265","HCSMMF283","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.859 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":7,"Tile":2203,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF276","HCSMMF272","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.865 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":7,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF204","HCSMMF246","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.867 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":7,"Tile":2219,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF233","HCSMMF250","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.868 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":7,"Tile":2206,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF234","HCSMMF241","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.869 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":7,"Tile":2214,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF191","HCSMMF274","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.872 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":7,"Tile":2208,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF189","HCSMMF185","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.873 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":7,"Tile":2215,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF252","HCSMMF262","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.874 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":7,"Tile":2216,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF177","HCSMMF187","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.876 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":7,"Tile":2218,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF205","HCSMMF215","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.877 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":7,"Tile":2217,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF287","HCSMMF230","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.878 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":7,"Tile":2213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF181","HCSMMF237","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.879 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":7,"Tile":2221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF277","HCSMMF259","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.881 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":7,"Tile":2224,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF212","HCSMMF194","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.882 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":7,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF278","HCSMMF239","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.883 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":7,"Tile":2220,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF267","HCSMMF244","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.884 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":7,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF195","HCSMMF219","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.885 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":7,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF200","HCSMMF269","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.886 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":7,"Tile":2223,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF285","HCSMMF273","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.887 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":7,"Tile":2227,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF270","HCSMMF221","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.890 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":7,"Tile":2228,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF224","HCSMMF217","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:20:57.894 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:57.900 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:20:57.991 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:57.991 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:20:58.028 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.028 -08 000000053 INF: FPGA: Recv T2MOVETO 36
17-02-28 20:20:58.028 -08 000000053 INF: FPGA: Recv T3MOVETO 35
17-02-28 20:20:58.028 -08 000000053 INF: FPGA: Recv T1MOVETO 61
17-02-28 20:20:58.029 -08 000000089 INF: Tilt Motor 3: To move from 5.271 to 5.326 (0.055 mm) should take 36 steps, but required 35 steps (0.053 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:20:58.029 -08 000000073 INF: Tilt Motor 1: To move from 5.179 to 5.084 (-0.094 mm) should take 62 steps, but required 61 steps (0.093 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:20:58.029 -08 000000085 INF: Tilt Motor 2: To move from 5.243 to 5.299 (0.056 mm) should take 37 steps, but required 36 steps (0.055 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:20:58.029 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:58.030 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:58.033 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:20:58.037 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:58.089 -08 000000010 INF: FPGA: Recv T3RD 20962
17-02-28 20:20:58.089 -08 000000010 INF: FPGA: Recv T1RD 20021
17-02-28 20:20:58.089 -08 000000010 INF: FPGA: Recv T2RD 20857
17-02-28 20:20:58.089 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:20:58.089 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:58.090 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3493 + 4/6
17-02-28 20:20:58.090 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:20:58.091 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:58.092 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:58.133 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.138 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:20:58.153 -08 000000081 INF: FPGA: Recv T1RD 20021
17-02-28 20:20:58.154 -08 000000081 INF: FPGA: Recv T2RD 20857
17-02-28 20:20:58.154 -08 000000081 INF: FPGA: Recv T3RD 20962
17-02-28 20:20:58.154 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3493 + 4/6
17-02-28 20:20:58.154 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:20:58.154 -08 000000089 INF: FPGA: Xmit T3RD\n
17-02-28 20:20:58.154 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:20:58.155 -08 000000085 INF: FPGA: Xmit T2RD\n
17-02-28 20:20:58.162 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:20:58.213 -08 000000035 INF: FPGA: Recv T3RD 20962
17-02-28 20:20:58.213 -08 000000035 INF: FPGA: Recv T2RD 20857
17-02-28 20:20:58.213 -08 000000035 INF: FPGA: Recv T1RD 20021
17-02-28 20:20:58.213 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:20:58.213 -08 000000089 INF: Tilt Motor 3: Encoder: at motor step 3493 + 4/6
17-02-28 20:20:58.213 -08 000000089 INF: Tilt Motor 3: After move to 5.3257, error = -0.0014, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.213 -08 000000085 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:20:58.213 -08 000000085 INF: Tilt Motor 2: After move to 5.2991, error = -0.0014, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.213 -08 000000089 INF: Tilt Motor 3: Moved to 5.3243 after 455.3154 ms
17-02-28 20:20:58.213 -08 000000085 INF: Tilt Motor 2: Moved to 5.2977 after 457.465 ms
17-02-28 20:20:58.213 -08 000000073 INF: Tilt Motor 1: After move to 5.0845, error = 0.0009, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.213 -08 000000073 INF: Tilt Motor 1: Moved to 5.0853 after 459.149 ms
17-02-28 20:20:58.214 -08 000000089 INF: ======================================
17-02-28 20:20:58.214 -08 000000085 INF: ======================================
17-02-28 20:20:58.214 -08 000000073 INF: ======================================
17-02-28 20:20:58.215 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:58.216 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:20:58.216 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=5.08445418705215, m2=5.29905181249686, m3=5.32572181249686
17-02-28 20:20:58.222 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:20:58.224 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.230 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:20:58.231 -08 000000018 INF: Transformed StartingYStagePosition from 40.4300300598145 mm to 40.4300300598145 mm.
17-02-28 20:20:58.231 -08 000000018 INF: Transformed StartingYStageITFPosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:58.231 -08 000000018 INF: Transformed TriggerYStagePosition from 40.2300300598145 mm to 40.2300300598145 mm.
17-02-28 20:20:58.231 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.235 -08 000000018 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:20:58.235 -08 000000018 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:20:58.235 -08 000000018 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:20:58.275 -08 000000101 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:58.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.276 -08 000000018 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:20:58.276 -08 000000018 INF: Z Motor: Moving to -0.2300 mm, started at -0.0740 mm
17-02-28 20:20:58.276 -08 000000018 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:20:58.328 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:20:58.337 -08 000000089 INF: FPGA: Recv ZTRG 
17-02-28 20:20:58.337 -08 000000018 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:20:58.402 -08 000000101 INF: FPGA: Recv ZYT 
17-02-28 20:20:58.402 -08 000000018 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:20:58.402 -08 000000018 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:20:58.464 -08 000000064 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:20:58.464 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:20:58.464 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:20:58.464 -08 000000018 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9861 ms
17-02-28 20:20:58.464 -08 000000018 INF: FPGA: Xmit ZDACR\n
17-02-28 20:20:58.526 -08 000000108 INF: FPGA: Recv ZDACR 60292
17-02-28 20:20:58.526 -08 000000018 INF: Z Motor: MoveAndTrigger took 250.3949 ms w/comms
17-02-28 20:20:58.526 -08 000000018 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:20:58.526 -08 000000018 INF: Z Motor: MoveAbsStepped took 250.5873 ms
17-02-28 20:20:58.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.527 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.536 -08 000000018 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:20:58.536 -08 000000018 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:20:58.588 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:20:58.608 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:20:58.609 -08 000000018 INF: Transformed XStagePosition from 25.49393 mm to 25.4939308166504 mm.
17-02-28 20:20:58.617 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:20:58.617 -08 000000018 INF: Transformed StartingYStagePosition from 64.4705383300781 mm to 64.4705383300781 mm.
17-02-28 20:20:58.617 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.617 -08 000000018 INF: Transformed TriggerYStagePosition from 64.2705383300781 mm to 64.2705383300781 mm.
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:20:58.620 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:20:58.620 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:58.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:20:58.622 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:20:58.622 -08 000000035 INF: ===================MoveEmissionFilters===================
17-02-28 20:20:58.623 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:20:58.623 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:58.623 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:58.623 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:58.623 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:58.623 -08 000000025 INF: ===================Move X Motor without settling===================
17-02-28 20:20:58.623 -08 000000082 INF: ===================Move Y Motor without settling===================
17-02-28 20:20:58.624 -08 000000025 INF: X Motor: Xmit PR VM\n
17-02-28 20:20:58.624 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:58.624 -08 000000082 INF: Y Motor: Moving to 64.4705 mm @25.000 mm/sec, started at 14.8438 mm
17-02-28 20:20:58.624 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:20:58.624 -08 000000082 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:20:58.624 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:20:58.624 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:58.624 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:20:58.625 -08 000000073 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:20:58.625 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:20:58.625 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:20:58.625 -08 000000066 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:20:58.625 -08 000000081 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000073 INF: ======================================
17-02-28 20:20:58.625 -08 000000034 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:20:58.625 -08 000000105 INF: ======================================
17-02-28 20:20:58.626 -08 000000034 INF: ======================================
17-02-28 20:20:58.626 -08 000000069 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:20:58.626 -08 000000081 INF: ======================================
17-02-28 20:20:58.626 -08 000000069 INF: ======================================
17-02-28 20:20:58.626 -08 000000066 INF: ======================================
17-02-28 20:20:58.626 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:20:58.628 -08 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:20:58.628 -08 000000087 INF: ======================================
17-02-28 20:20:58.628 -08 000000085 INF: ======================================
17-02-28 20:20:58.628 -08 000000109 INF: ======================================
17-02-28 20:20:58.629 -08 000000078 INF: ======================================
17-02-28 20:20:58.629 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:20:58.629 -08 000000010 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:20:58.631 -08 000000052 INF: ======================================
17-02-28 20:20:58.631 -08 000000010 INF: ======================================
17-02-28 20:20:58.632 -08 000000035 INF: ======================================
17-02-28 20:20:58.714 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.714 -08 000000082 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:20:58.714 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:20:58.714 -08 000000025 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:20:58.714 -08 000000025 INF: X Motor: Xmit PR VI\n
17-02-28 20:20:58.776 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.776 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Moving to 25.4939 mm @15.000 mm/sec, started at 23.2896 mm
17-02-28 20:20:58.778 -08 000000025 INF: X Motor: Xmit MA -13724\n
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:20:58.841 -08 000000025 INF: X Motor: Recv MA -13724\r\n>
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Set target position to 5947054 encoder counts
17-02-28 20:20:58.841 -08 000000082 INF: Y Motor: Xmit s r0xca 5947054\r
17-02-28 20:20:58.841 -08 000000025 INF: X Motor: WaitUntilStopped 60147
17-02-28 20:20:58.903 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.903 -08 000000082 INF: Y Motor: Start the move command
17-02-28 20:20:58.903 -08 000000082 INF: Y Motor: Xmit t 1\r
17-02-28 20:20:58.965 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:20:58.965 -08 000000082 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:20:58.965 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.091 -08 000000082 INF: Y Motor: Unshifted Position: 1065916
17-02-28 20:20:59.141 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.263 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.402 -08 000000082 INF: Y Motor: Unshifted Position: 1776049
17-02-28 20:20:59.452 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.466 -08 000000025 INF: X Motor: Xmit PR ER\n
17-02-28 20:20:59.526 -08 000000025 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:20:59.526 -08 000000025 INF: X Motor: Moved to 25.4941 after 684 ms
17-02-28 20:20:59.526 -08 000000025 INF: ======================================
17-02-28 20:20:59.576 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.713 -08 000000082 INF: Y Motor: Unshifted Position: 2549401
17-02-28 20:20:59.763 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:20:59.890 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.026 -08 000000082 INF: Y Motor: Unshifted Position: 3334350
17-02-28 20:21:00.076 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.200 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.336 -08 000000082 INF: Y Motor: Unshifted Position: 4110253
17-02-28 20:21:00.386 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.514 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.650 -08 000000082 INF: Y Motor: Unshifted Position: 4896022
17-02-28 20:21:00.700 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.825 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:00.960 -08 000000082 INF: Y Motor: Unshifted Position: 5669792
17-02-28 20:21:01.010 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:01.139 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:01.272 -08 000000082 INF: Y Motor: Unshifted Position: 5947056
17-02-28 20:21:01.272 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:01.272 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:01.334 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:21:01.334 -08 000000082 INF: Y Motor: Moved to 64.4706 after 2369 ms
17-02-28 20:21:01.334 -08 000000082 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:01.400 -08 000000082 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:01.400 -08 000000082 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:01.400 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:01.459 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:21:01.459 -08 000000082 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:01.459 -08 000000082 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:01.523 -08 000000082 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:01.584 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:01.646 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:21:01.646 -08 000000082 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:01.646 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:01.712 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:21:01.712 -08 000000082 INF: ======================================
17-02-28 20:21:01.713 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:21:01.715 -08 000000075 INF: ======================================
17-02-28 20:21:01.716 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:01.717 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:01.717 -08 000000018 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:21:01.717 -08 000000018 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:21:01.771 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:21:01.771 -08 000000018 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:21:01.834 -08 000000085 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:01.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:01.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:01.835 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:01.897 -08 000000025 INF: FPGA: Recv TDIYERD 6447055
17-02-28 20:21:01.897 -08 000000018 INF: Before scan, Y encoder from FPGA = 6447055 counts (64.471 mm)
17-02-28 20:21:01.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:01.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:01.899 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:01.899 -08 000000010 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:01.899 -08 000000010 INF: ======================================
17-02-28 20:21:01.900 -08 000000053 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:01.900 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:01.901 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:01.902 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:01.902 -08 000000053 INF: FPGA: Xmit TDIYPOS 6427054\n
17-02-28 20:21:01.958 -08 000000081 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:01.958 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:01.960 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:01.960 -08 000000053 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:21:02.020 -08 000000069 INF: FPGA: Recv TDIYARM2
17-02-28 20:21:02.021 -08 000000053 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:02.022 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.023 -08 000000053 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:02.024 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.025 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:21:02.026 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:02.027 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:02.398 -08 000000053 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:21:02.398 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:21:02.398 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:02.414 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:02.415 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:02.793 -08 000000053 INF: Camera #2 AttachBuffer (imageDataPtr = 53754138696 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:21:02.793 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:21:02.793 -08 000000053 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:02.808 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:02.810 -08 000000053 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:21:02.812 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.815 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:02.816 -08 000000053 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:02.816 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:02.819 -08 000000053 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:02.819 -08 000000053 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:02.819 -08 000000053 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:21:02.819 -08 000000053 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:21:02.832 -08 000000057 INF: FPGA: Recv ZYT 
17-02-28 20:21:02.832 -08 000000053 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:21:02.832 -08 000000053 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:21:02.894 -08 000000033 INF: FPGA: Recv ZARM
17-02-28 20:21:02.894 -08 000000053 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.045 ms
17-02-28 20:21:02.894 -08 000000053 INF: Z Motor: ArmAbsStepped took 74.8331 ms
17-02-28 20:21:02.895 -08 000000053 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:02.897 -08 000000053 INF: ===================TDI Scan Setup===================
17-02-28 20:21:02.898 -08 000000053 INF: ======================================
17-02-28 20:21:02.900 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:02.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:02.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:02.902 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:02.902 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:02.904 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:02.904 -08 000000075 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:02.904 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:02.904 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:02.904 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:02.904 -08 000000075 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:02.904 -08 000000075 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:02.904 -08 000000075 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:02.904 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:02.907 -08 000000075 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:03.270 -08 000000081 INF: FPGA: Recv EX2MV
17-02-28 20:21:03.270 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 365.9722 ms
17-02-28 20:21:03.270 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.2004 ms
17-02-28 20:21:03.270 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.3133 ms
17-02-28 20:21:03.271 -08 000000078 INF: ======================================
17-02-28 20:21:03.352 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:21:03.352 -08 000000075 INF: Excitation Filter 1: Moved -107 steps in 447.9186 ms
17-02-28 20:21:03.352 -08 000000075 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 448.0817 ms
17-02-28 20:21:03.352 -08 000000075 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 448.2097 ms
17-02-28 20:21:03.353 -08 000000075 INF: ======================================
17-02-28 20:21:03.354 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:03.356 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:03.357 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:03.357 -08 000000073 INF: ===================Serial===================
17-02-28 20:21:03.357 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:03.358 -08 000000081 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:03.358 -08 000000081 INF: Y Motor: Moving to 62.9074 mm @1.500 mm/sec, started at 64.4706 mm
17-02-28 20:21:03.358 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:03.358 -08 000000081 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:03.358 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:03.358 -08 000000073 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:21:03.359 -08 000000073 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:03.359 -08 000000057 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:03.359 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:21:03.359 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:21:03.360 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.360 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.360 -08 000000057 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:03.361 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.361 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.411 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.411 -08 000000081 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:03.411 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:03.473 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.473 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:03.510 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.510 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.511 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.511 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Set target position to 5790744 encoder counts
17-02-28 20:21:03.535 -08 000000081 INF: Y Motor: Xmit s r0xca 5790744\r
17-02-28 20:21:03.597 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.597 -08 000000081 INF: Y Motor: Start the move command
17-02-28 20:21:03.597 -08 000000081 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:03.659 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:03.659 -08 000000081 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:21:03.659 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:03.660 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.660 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.661 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.661 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.783 -08 000000081 INF: Y Motor: Unshifted Position: 5929033
17-02-28 20:21:03.810 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.810 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.811 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:03.811 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:03.833 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:03.960 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:03.960 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:21:03.960 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:21:03.960 -08 000000066 INF: ===================Camera #2 Frame #1===================
17-02-28 20:21:03.961 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:21:03.961 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:21:03.961 -08 000000101 INF: ===================Camera #0 Frame #1===================
17-02-28 20:21:04.096 -08 000000081 INF: Y Motor: Unshifted Position: 5881874
17-02-28 20:21:04.113 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:21:04.113 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:21:04.113 -08 000000066 INF: ===================Camera #2 Frame #3===================
17-02-28 20:21:04.116 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:21:04.116 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:21:04.116 -08 000000101 INF: ===================Camera #0 Frame #3===================
17-02-28 20:21:04.146 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.270 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.272 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:21:04.272 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:21:04.272 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:21:04.272 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:21:04.272 -08 000000066 INF: ===================Camera #2 Frame #4===================
17-02-28 20:21:04.272 -08 000000101 INF: ===================Camera #0 Frame #4===================
17-02-28 20:21:04.407 -08 000000081 INF: Y Motor: Unshifted Position: 5835328
17-02-28 20:21:04.425 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:04.425 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:04.425 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:04.425 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:04.425 -08 000000066 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:04.425 -08 000000101 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:04.457 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.470 -08 000000082 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:04.470 -08 000000082 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:04.470 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:04.471 -08 000000073 INF: ===================Serial===================
17-02-28 20:21:04.472 -08 000000057 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:04.472 -08 000000073 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:21:04.473 -08 000000073 INF: ===================Serial===================
17-02-28 20:21:04.473 -08 000000085 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:04.474 -08 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:04.474 -08 000000085 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:04.474 -08 000000085 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:04.474 -08 000000085 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:04.474 -08 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:04.474 -08 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:04.474 -08 000000085 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:04.474 -08 000000033 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:04.474 -08 000000073 INF: ======================================
17-02-28 20:21:04.475 -08 000000033 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:04.578 -08 000000101 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:21:04.578 -08 000000101 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:21:04.578 -08 000000101 INF: ===================Camera #0 Frame #6===================
17-02-28 20:21:04.579 -08 000000066 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:21:04.579 -08 000000066 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:21:04.579 -08 000000066 INF: ===================Camera #2 Frame #6===================
17-02-28 20:21:04.581 -08 000000101 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:21:04.582 -08 000000066 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:21:04.582 -08 000000101 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:04.583 -08 000000066 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:04.584 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.608 -08 000000066 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:04.608 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:21:04.610 -08 000000066 INF: ======================================
17-02-28 20:21:04.632 -08 000000101 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:04.632 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:21:04.633 -08 000000101 INF: ======================================
17-02-28 20:21:04.635 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:04.636 -08 000000025 INF: ======================================
17-02-28 20:21:04.722 -08 000000081 INF: Y Motor: Unshifted Position: 5790762
17-02-28 20:21:04.772 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:04.842 -08 000000010 INF: FPGA: Recv EX1MV
17-02-28 20:21:04.842 -08 000000010 INF: FPGA: Recv EX2MV
17-02-28 20:21:04.842 -08 000000085 INF: Excitation Filter 1: Moved 107 steps in 368.1996 ms
17-02-28 20:21:04.842 -08 000000033 INF: Excitation Filter 2: Moved 107 steps in 368.0301 ms
17-02-28 20:21:04.842 -08 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.2316 ms
17-02-28 20:21:04.842 -08 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.3613 ms
17-02-28 20:21:04.842 -08 000000085 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.3494 ms
17-02-28 20:21:04.842 -08 000000085 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 368.757 ms
17-02-28 20:21:04.843 -08 000000033 INF: ======================================
17-02-28 20:21:04.843 -08 000000085 INF: ======================================
17-02-28 20:21:04.844 -08 000000057 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:04.846 -08 000000057 INF: ======================================
17-02-28 20:21:04.910 -08 000000081 INF: Y Motor: Unshifted Position: 5790743
17-02-28 20:21:04.910 -08 000000081 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:04.910 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:04.972 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:04.972 -08 000000081 INF: Y Motor: Moved to 62.9074 after 1312 ms
17-02-28 20:21:04.972 -08 000000081 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:05.031 -08 000000081 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:05.031 -08 000000081 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:05.031 -08 000000081 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:05.096 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:05.096 -08 000000081 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:05.096 -08 000000081 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:05.160 -08 000000081 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: Recv v 0\r
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:05.222 -08 000000081 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:05.281 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:05.281 -08 000000081 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:05.281 -08 000000081 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:05.344 -08 000000081 INF: Y Motor: Recv ok\r
17-02-28 20:21:05.344 -08 000000081 INF: ======================================
17-02-28 20:21:05.345 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:05.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:05.347 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.347 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:05.406 -08 000000035 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:05.406 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:05.468 -08 000000051 INF: FPGA: Recv TDIYERD 6290745
17-02-28 20:21:05.468 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:05.530 -08 000000057 INF: FPGA: Recv ZADCR 2423
17-02-28 20:21:05.530 -08 000000018 INF: At scan end Y pos = 62.907 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:21:05.530 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:05.593 -08 000000036 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:21:05.593 -08 000000018 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:21:05.593 -08 000000018 INF: TDIScan finished after 6984.6835 ms
17-02-28 20:21:05.593 -08 000000018 INF: Image[0]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:21:05.593 -08 000000018 INF: Image[2]: Y should trigger at 64.271 mm, 2nd row was at 64.258 mm (error = -0.013 mm)
17-02-28 20:21:05.593 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:05.656 -08 000000075 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:05.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.658 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.659 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:05.659 -08 000000069 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:05.659 -08 000000030 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:05.659 -08 000000033 INF: ======================================
17-02-28 20:21:05.659 -08 000000030 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:05.659 -08 000000030 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:05.660 -08 000000069 INF: ======================================
17-02-28 20:21:05.720 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:05.720 -08 000000030 INF: ======================================
17-02-28 20:21:05.721 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.722 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.723 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:05.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.772 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:05.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:05.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:05.895 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:05.895 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:05.896 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:05.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:21:05.904 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:05.905 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:21:05.905 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:21:06.526 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:21:06.549 -08 000000018 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0576110928033664Best Z position at top surface = -0.129137620725494Best Z position at top surface + compensator offset = -0.106437620725494 C:3,L:8,B
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 0 is -0.129137620725494
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 0 is 63.76527
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0576110928033664
17-02-28 20:21:06.551 -08 000000018 INF: ETF Weighted Average for Y at Peaks index 1 is 63.42096
17-02-28 20:21:06.551 -08 000000018 INF: Z-height at LaneBottomSurface is -0.0576110928033664.
17-02-28 20:21:06.551 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:06.684 -08 000000018 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:06.684 -08 000000018 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:06.717 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:06.717 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:21:06.719 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:06.719 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:06.720 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:06.721 -08 000000030 INF: ===================Move Tilt Motor 1===================
17-02-28 20:21:06.721 -08 000000081 INF: ===================Move Tilt Motor 2===================
17-02-28 20:21:06.721 -08 000000030 INF: Tilt Motor 1: Moving to 5.0723 mm, started at 5.0853 mm, delta = -0.0130 mm
17-02-28 20:21:06.721 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:06.721 -08 000000108 INF: ===================Move Tilt Motor 3===================
17-02-28 20:21:06.721 -08 000000081 INF: Tilt Motor 2: Moving to 5.3062 mm, started at 5.2977 mm, delta = 0.0085 mm
17-02-28 20:21:06.721 -08 000000108 INF: Tilt Motor 3: Moving to 5.3329 mm, started at 5.3243 mm, delta = 0.0085 mm
17-02-28 20:21:06.722 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:06.724 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:06.779 -08 000000073 INF: FPGA: Recv T1RD 20021
17-02-28 20:21:06.779 -08 000000073 INF: FPGA: Recv T2RD 20857
17-02-28 20:21:06.779 -08 000000073 INF: FPGA: Recv T3RD 20961
17-02-28 20:21:06.779 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3476 + 1/6
17-02-28 20:21:06.779 -08 000000081 INF: Tilt Motor 2: Moving to 20891 encoder counts
17-02-28 20:21:06.779 -08 000000081 INF: FPGA: Xmit T2MOVETO 20891\n
17-02-28 20:21:06.779 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3336 + 5/6
17-02-28 20:21:06.779 -08 000000030 INF: Tilt Motor 1: Moving to 19970 encoder counts
17-02-28 20:21:06.779 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3493 + 3/6
17-02-28 20:21:06.779 -08 000000108 INF: Tilt Motor 3: Moving to 20996 encoder counts
17-02-28 20:21:06.780 -08 000000108 INF: FPGA: Xmit T3MOVETO 20996\n
17-02-28 20:21:06.782 -08 000000030 INF: FPGA: Xmit T1MOVETO 19970\n
17-02-28 20:21:06.903 -08 000000051 INF: FPGA: Recv T2MOVETO 5
17-02-28 20:21:06.903 -08 000000051 INF: FPGA: Recv T3MOVETO 5
17-02-28 20:21:06.903 -08 000000051 INF: FPGA: Recv T1MOVETO 8
17-02-28 20:21:06.903 -08 000000030 INF: Tilt Motor 1: To move from 5.085 to 5.072 (-0.013 mm) should take 8 steps, but required 8 steps (0.012 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:21:06.903 -08 000000108 INF: Tilt Motor 3: To move from 5.324 to 5.333 (0.009 mm) should take 6 steps, but required 5 steps (0.008 mm). Slippage = -0.002 mm (-0.18%)
17-02-28 20:21:06.903 -08 000000081 INF: Tilt Motor 2: To move from 5.298 to 5.306 (0.009 mm) should take 6 steps, but required 5 steps (0.008 mm). Slippage = -0.002 mm (-0.18%)
17-02-28 20:21:06.903 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:06.904 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:06.906 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:06.965 -08 000000086 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:06.965 -08 000000086 INF: FPGA: Recv T3RD 20991
17-02-28 20:21:06.965 -08 000000086 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:06.965 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:06.965 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3498 + 3/6
17-02-28 20:21:06.965 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:06.965 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:06.966 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:06.968 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:07.027 -08 000000045 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:07.027 -08 000000045 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:07.027 -08 000000045 INF: FPGA: Recv T3RD 20991
17-02-28 20:21:07.027 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:07.027 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:07.027 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3498 + 3/6
17-02-28 20:21:07.027 -08 000000030 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:07.028 -08 000000081 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:07.030 -08 000000108 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:07.089 -08 000000075 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:07.089 -08 000000075 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:07.089 -08 000000075 INF: FPGA: Recv T3RD 20991
17-02-28 20:21:07.089 -08 000000108 INF: Tilt Motor 3: Encoder: at motor step 3498 + 3/6
17-02-28 20:21:07.089 -08 000000081 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:07.089 -08 000000108 INF: Tilt Motor 3: After move to 5.3329, error = -0.0012, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.089 -08 000000081 INF: Tilt Motor 2: After move to 5.3062, error = -0.0009, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.089 -08 000000081 INF: Tilt Motor 2: Moved to 5.3053 after 368.5718 ms
17-02-28 20:21:07.089 -08 000000108 INF: Tilt Motor 3: Moved to 5.3317 after 368.5186 ms
17-02-28 20:21:07.090 -08 000000081 INF: ======================================
17-02-28 20:21:07.090 -08 000000108 INF: ======================================
17-02-28 20:21:07.090 -08 000000030 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:07.090 -08 000000030 INF: Tilt Motor 1: After move to 5.0723, error = 0.0008, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.090 -08 000000030 INF: Tilt Motor 1: Moved to 5.0731 after 369.5089 ms
17-02-28 20:21:07.090 -08 000000030 INF: ======================================
17-02-28 20:21:07.091 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.092 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.093 -08 000000018 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=5.07232517203988, m2=5.30622331841057, m3=5.33289331841057
17-02-28 20:21:07.093 -08 000000018 INF: ETF Best Z: -0.05761109 mm (15102 DAC)
17-02-28 20:21:07.093 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.094 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.094 -08 000000018 INF: Compensator: Remaining OutOfPath
17-02-28 20:21:07.094 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.095 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:07.536 -08 000000018 INF: Swath 1 position calculated to be: {X=24.92233, Y=39.70494} from estimated center X= 25.417, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:21:07.536 -08 000000018 INF: Swath 2 position calculated to be: {X=26.03033, Y=39.70494} from estimated center X= 25.417, Y= 39.45999 on surface LaneBottomSurface
17-02-28 20:21:07.542 -08 000000018 INF: Swath 0: Converted transform from (137.8255, 6.198289) pixels to (0.04761, 0.00207) mm.
17-02-28 20:21:07.547 -08 000000018 INF: Swath 1: Converted transform from (110.5954, 7.487943) pixels to (0.038295, 0.002415) mm.
17-02-28 20:21:07.548 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:07.549 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:07.549 -08 000000018 INF: Transformed XStagePosition from 24.92233 mm to 24.9699446707964 mm.
17-02-28 20:21:07.561 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4970157396756 mm.
17-02-28 20:21:07.561 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2970157396756 mm.
17-02-28 20:21:07.561 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3877657396756 mm.
17-02-28 20:21:07.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:07.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:07.563 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:07.563 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:21:07.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:07.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:07.570 -08 000000039 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:07.570 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:07.570 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:21:07.571 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:07.571 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:07.571 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:21:07.571 -08 000000069 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:07.571 -08 000000105 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:07.571 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:07.571 -08 000000105 INF: Z Motor: Moving to -0.0776 mm, started at -0.0100 mm
17-02-28 20:21:07.571 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:07.571 -08 000000105 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:21:07.571 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000109 INF: ===================Move X Motor without settling===================
17-02-28 20:21:07.572 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:07.572 -08 000000109 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:07.572 -08 000000101 INF: Y Motor: Moving to 64.4970 mm @25.000 mm/sec, started at 62.9074 mm
17-02-28 20:21:07.572 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:07.572 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:07.572 -08 000000066 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:07.572 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:07.572 -08 000000038 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:07.573 -08 000000077 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:07.573 -08 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:07.573 -08 000000066 INF: ======================================
17-02-28 20:21:07.573 -08 000000077 INF: ======================================
17-02-28 20:21:07.573 -08 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:07.573 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:07.573 -08 000000078 INF: ======================================
17-02-28 20:21:07.574 -08 000000036 INF: ======================================
17-02-28 20:21:07.574 -08 000000085 INF: ======================================
17-02-28 20:21:07.574 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:07.575 -08 000000047 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:07.575 -08 000000038 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:07.575 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:07.575 -08 000000010 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:07.576 -08 000000038 INF: ======================================
17-02-28 20:21:07.576 -08 000000072 INF: ======================================
17-02-28 20:21:07.576 -08 000000010 INF: ======================================
17-02-28 20:21:07.576 -08 000000047 INF: ======================================
17-02-28 20:21:07.577 -08 000000075 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:07.577 -08 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:07.578 -08 000000075 INF: ======================================
17-02-28 20:21:07.578 -08 000000081 INF: ======================================
17-02-28 20:21:07.578 -08 000000108 INF: ======================================
17-02-28 20:21:07.579 -08 000000039 INF: ======================================
17-02-28 20:21:07.589 -08 000000090 INF: FPGA: Recv ZTRG 
17-02-28 20:21:07.589 -08 000000105 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:21:07.651 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:21:07.651 -08 000000105 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:21:07.651 -08 000000105 INF: FPGA: Xmit ZMV 20345\n
17-02-28 20:21:07.653 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.653 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:07.653 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:07.653 -08 000000109 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:07.653 -08 000000109 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:07.713 -08 000000045 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:21:07.713 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:21:07.715 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Moving to 24.9699 mm @15.000 mm/sec, started at 25.4941 mm
17-02-28 20:21:07.715 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:07.715 -08 000000109 INF: X Motor: Xmit MA -13939\n
17-02-28 20:21:07.778 -08 000000087 INF: FPGA: Recv ZMV 
17-02-28 20:21:07.778 -08 000000105 INF: Z Motor: MoveAndTrigger 'ZMV' command took 127.0242 ms
17-02-28 20:21:07.778 -08 000000105 INF: FPGA: Xmit ZDACR\n
17-02-28 20:21:07.780 -08 000000109 INF: X Motor: Recv MA -13939\r\n>
17-02-28 20:21:07.780 -08 000000109 INF: X Motor: WaitUntilStopped 60035
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Set target position to 5949702 encoder counts
17-02-28 20:21:07.781 -08 000000101 INF: Y Motor: Xmit s r0xca 5949702\r
17-02-28 20:21:07.840 -08 000000060 INF: FPGA: Recv ZDACR 20345
17-02-28 20:21:07.840 -08 000000105 INF: Z Motor: MoveAndTrigger took 269.217 ms w/comms
17-02-28 20:21:07.840 -08 000000105 INF: Z Motor: After move to -0.0776, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:07.840 -08 000000105 INF: Z Motor: MoveAbsStepped took 269.3774 ms
17-02-28 20:21:07.841 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:07.842 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.842 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:21:07.842 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:07.842 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:21:07.843 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:07.843 -08 000000075 INF: ===================Camera Arm TDI===================
17-02-28 20:21:07.844 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:07.844 -08 000000075 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:07.844 -08 000000010 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:07.845 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:07.845 -08 000000075 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:07.845 -08 000000010 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:21:07.902 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:21:07.902 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:07.903 -08 000000010 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:21:07.904 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:07.904 -08 000000101 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:21:07.904 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:07.964 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:21:07.964 -08 000000010 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:07.966 -08 000000010 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:07.966 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:07.968 -08 000000010 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:21:07.968 -08 000000010 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:21:07.968 -08 000000010 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:21:08.026 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:08.026 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:08.028 -08 000000101 INF: Y Motor: Unshifted Position: 5872246
17-02-28 20:21:08.028 -08 000000010 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:08.028 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:08.030 -08 000000010 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:08.030 -08 000000010 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:08.030 -08 000000010 INF: Z Motor: Arming to move to -0.0376 mm
17-02-28 20:21:08.030 -08 000000010 INF: FPGA: Xmit ZYT 6429702 4\n
17-02-28 20:21:08.078 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:08.088 -08 000000034 INF: FPGA: Recv ZYT 
17-02-28 20:21:08.088 -08 000000010 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6372246 enc / 63.722 mm / ) = 6429702 enc / 64.297 mm
17-02-28 20:21:08.088 -08 000000010 INF: FPGA: Xmit ZARM 9859\n
17-02-28 20:21:08.150 -08 000000086 INF: FPGA: Recv ZARM
17-02-28 20:21:08.150 -08 000000010 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9606 ms
17-02-28 20:21:08.150 -08 000000010 INF: Z Motor: ArmAbsStepped took 119.8488 ms
17-02-28 20:21:08.150 -08 000000010 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:08.152 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:08.153 -08 000000010 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:08.153 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:08.155 -08 000000010 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:08.155 -08 000000010 INF: ===================TDI Scan Setup===================
17-02-28 20:21:08.157 -08 000000010 INF: ======================================
17-02-28 20:21:08.202 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:08.217 -08 000000109 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:08.279 -08 000000109 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:08.279 -08 000000109 INF: X Motor: Moved to 24.9692 after 499 ms
17-02-28 20:21:08.279 -08 000000109 INF: ======================================
17-02-28 20:21:08.342 -08 000000101 INF: Y Motor: Unshifted Position: 5949703
17-02-28 20:21:08.342 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:08.342 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:08.403 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:08.403 -08 000000101 INF: Y Motor: Moved to 64.4970 after 499 ms
17-02-28 20:21:08.403 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:08.466 -08 000000101 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:08.466 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:08.466 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:08.527 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:08.527 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:08.527 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:08.589 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:08.651 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:08.716 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:08.716 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:08.716 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:08.778 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:08.778 -08 000000101 INF: ======================================
17-02-28 20:21:08.779 -08 000000069 INF: ===================Move X,Y===================
17-02-28 20:21:08.780 -08 000000069 INF: ======================================
17-02-28 20:21:08.836 -08 000000075 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:08.836 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:08.836 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:08.851 -08 000000075 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:08.853 -08 000000075 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:09.914 -08 000000075 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:09.914 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:09.914 -08 000000075 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:09.929 -08 000000075 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:09.931 -08 000000075 INF: ===================Camera Arm TDI===================
17-02-28 20:21:09.932 -08 000000075 INF: ======================================
17-02-28 20:21:09.933 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:09.934 -08 000000105 INF: ======================================
17-02-28 20:21:09.935 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:09.936 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:09.936 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:21:09.936 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:21:10.025 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.025 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:21:10.087 -08 000000101 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:10.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:10.087 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:10.087 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:10.149 -08 000000075 INF: FPGA: Recv TDIYERD 6449703
17-02-28 20:21:10.149 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449703 counts (64.497 mm)
17-02-28 20:21:10.149 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:10.150 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:10.150 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:10.150 -08 000000057 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:10.151 -08 000000057 INF: ======================================
17-02-28 20:21:10.151 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:10.152 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:10.152 -08 000000045 INF: FPGA: Xmit TDIYPOS 6338777\n
17-02-28 20:21:10.211 -08 000000090 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:10.211 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:10.212 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:10.213 -08 000000045 INF: FPGA: Xmit TDIYARM3 139264 6429702 1 1\n
17-02-28 20:21:10.273 -08 000000081 INF: FPGA: Recv TDIYARM3
17-02-28 20:21:10.273 -08 000000045 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:10.274 -08 000000045 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:10.275 -08 000000045 INF: ======================================
17-02-28 20:21:10.276 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:10.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:10.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.277 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.278 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.279 -08 000000030 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:10.279 -08 000000051 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:10.279 -08 000000030 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:10.279 -08 000000030 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:10.279 -08 000000030 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:10.279 -08 000000051 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:10.279 -08 000000051 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:10.279 -08 000000051 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:10.279 -08 000000030 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:10.282 -08 000000051 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:10.648 -08 000000034 INF: FPGA: Recv EX2MV
17-02-28 20:21:10.648 -08 000000034 INF: FPGA: Recv EX1MV
17-02-28 20:21:10.648 -08 000000051 INF: Excitation Filter 1: Moved -107 steps in 368.76 ms
17-02-28 20:21:10.648 -08 000000030 INF: Excitation Filter 2: Moved -107 steps in 368.9239 ms
17-02-28 20:21:10.648 -08 000000030 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0121 ms
17-02-28 20:21:10.648 -08 000000030 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.0763 ms
17-02-28 20:21:10.648 -08 000000051 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.8885 ms
17-02-28 20:21:10.648 -08 000000051 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.077 ms
17-02-28 20:21:10.648 -08 000000030 INF: ======================================
17-02-28 20:21:10.648 -08 000000051 INF: ======================================
17-02-28 20:21:10.649 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.650 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:10.651 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:10.651 -08 000000090 INF: ===================FPGA Z Wait===================
17-02-28 20:21:10.651 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:10.651 -08 000000090 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:10.651 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:10.652 -08 000000069 INF: Y Motor: Moving to 14.8487 mm @6.500 mm/sec, started at 64.4970 mm
17-02-28 20:21:10.652 -08 000000025 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:10.652 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:10.652 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:10.652 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:10.653 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:10.653 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:21:10.653 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:21:10.654 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.654 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.655 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.655 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.712 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.712 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:10.712 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:10.774 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.774 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:10.805 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.805 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.805 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.805 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Set target position to 984868 encoder counts
17-02-28 20:21:10.836 -08 000000069 INF: Y Motor: Xmit s r0xca 984868\r
17-02-28 20:21:10.898 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.898 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:21:10.898 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:10.955 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.955 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:10.955 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.955 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:10.959 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:10.959 -08 000000069 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:21:10.959 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.020 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:11.020 -08 000000090 INF: ======================================
17-02-28 20:21:11.087 -08 000000069 INF: Y Motor: Unshifted Position: 5887198
17-02-28 20:21:11.105 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:11.105 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:11.105 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:11.105 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:11.105 -08 000000089 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:11.105 -08 000000033 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:11.137 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.261 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.272 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:11.272 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:11.272 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:11.272 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:11.272 -08 000000033 INF: ===================Camera #2 Frame #11===================
17-02-28 20:21:11.272 -08 000000089 INF: ===================Camera #0 Frame #11===================
17-02-28 20:21:11.398 -08 000000069 INF: Y Motor: Unshifted Position: 5684402
17-02-28 20:21:11.440 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:11.440 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:11.440 -08 000000089 INF: ===================Camera #0 Frame #17===================
17-02-28 20:21:11.441 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:11.441 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:11.441 -08 000000033 INF: ===================Camera #2 Frame #17===================
17-02-28 20:21:11.448 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.574 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.608 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:11.608 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:11.608 -08 000000089 INF: ===================Camera #0 Frame #23===================
17-02-28 20:21:11.610 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:11.610 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:11.610 -08 000000033 INF: ===================Camera #2 Frame #23===================
17-02-28 20:21:11.709 -08 000000069 INF: Y Motor: Unshifted Position: 5481386
17-02-28 20:21:11.759 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.776 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:21:11.776 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:21:11.776 -08 000000089 INF: ===================Camera #0 Frame #29===================
17-02-28 20:21:11.779 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:21:11.779 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:21:11.779 -08 000000033 INF: ===================Camera #2 Frame #29===================
17-02-28 20:21:11.886 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:11.944 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:21:11.944 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:21:11.944 -08 000000089 INF: ===================Camera #0 Frame #35===================
17-02-28 20:21:11.948 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:21:11.948 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:21:11.948 -08 000000033 INF: ===================Camera #2 Frame #36===================
17-02-28 20:21:12.022 -08 000000069 INF: Y Motor: Unshifted Position: 5277929
17-02-28 20:21:12.072 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.112 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:21:12.112 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:21:12.112 -08 000000089 INF: ===================Camera #0 Frame #42===================
17-02-28 20:21:12.121 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:21:12.121 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:21:12.121 -08 000000033 INF: ===================Camera #2 Frame #42===================
17-02-28 20:21:12.198 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.284 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:21:12.284 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:21:12.284 -08 000000089 INF: ===================Camera #0 Frame #48===================
17-02-28 20:21:12.290 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:21:12.290 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:21:12.290 -08 000000033 INF: ===================Camera #2 Frame #48===================
17-02-28 20:21:12.335 -08 000000069 INF: Y Motor: Unshifted Position: 5076216
17-02-28 20:21:12.385 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.452 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:21:12.452 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:21:12.452 -08 000000089 INF: ===================Camera #0 Frame #54===================
17-02-28 20:21:12.459 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:21:12.459 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:21:12.459 -08 000000033 INF: ===================Camera #2 Frame #54===================
17-02-28 20:21:12.509 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.620 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:21:12.620 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:21:12.620 -08 000000089 INF: ===================Camera #0 Frame #60===================
17-02-28 20:21:12.628 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:21:12.628 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:21:12.628 -08 000000033 INF: ===================Camera #2 Frame #61===================
17-02-28 20:21:12.645 -08 000000069 INF: Y Motor: Unshifted Position: 4872765
17-02-28 20:21:12.695 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.789 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:21:12.789 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:21:12.789 -08 000000089 INF: ===================Camera #0 Frame #67===================
17-02-28 20:21:12.801 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:21:12.801 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:21:12.801 -08 000000033 INF: ===================Camera #2 Frame #67===================
17-02-28 20:21:12.822 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:12.958 -08 000000069 INF: Y Motor: Unshifted Position: 4667802
17-02-28 20:21:12.961 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:21:12.961 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:21:12.961 -08 000000089 INF: ===================Camera #0 Frame #73===================
17-02-28 20:21:12.971 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:21:12.971 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:21:12.971 -08 000000033 INF: ===================Camera #2 Frame #73===================
17-02-28 20:21:13.008 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.129 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:21:13.129 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:21:13.129 -08 000000089 INF: ===================Camera #0 Frame #79===================
17-02-28 20:21:13.132 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.141 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:21:13.141 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:21:13.141 -08 000000033 INF: ===================Camera #2 Frame #80===================
17-02-28 20:21:13.271 -08 000000069 INF: Y Motor: Unshifted Position: 4467590
17-02-28 20:21:13.298 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:21:13.298 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:21:13.298 -08 000000089 INF: ===================Camera #0 Frame #85===================
17-02-28 20:21:13.314 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:21:13.314 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:21:13.314 -08 000000033 INF: ===================Camera #2 Frame #86===================
17-02-28 20:21:13.321 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.445 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.467 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:21:13.467 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:21:13.467 -08 000000089 INF: ===================Camera #0 Frame #92===================
17-02-28 20:21:13.484 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:21:13.484 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:21:13.484 -08 000000033 INF: ===================Camera #2 Frame #92===================
17-02-28 20:21:13.581 -08 000000069 INF: Y Motor: Unshifted Position: 4263928
17-02-28 20:21:13.631 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.639 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:21:13.639 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:21:13.639 -08 000000089 INF: ===================Camera #0 Frame #98===================
17-02-28 20:21:13.654 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:21:13.654 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:21:13.654 -08 000000033 INF: ===================Camera #2 Frame #98===================
17-02-28 20:21:13.758 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.808 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:21:13.808 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:21:13.808 -08 000000089 INF: ===================Camera #0 Frame #104===================
17-02-28 20:21:13.824 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:21:13.824 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:21:13.824 -08 000000033 INF: ===================Camera #2 Frame #105===================
17-02-28 20:21:13.894 -08 000000069 INF: Y Motor: Unshifted Position: 4060465
17-02-28 20:21:13.944 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:13.976 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:21:13.976 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:21:13.976 -08 000000089 INF: ===================Camera #0 Frame #110===================
17-02-28 20:21:13.998 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:21:13.998 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:21:13.998 -08 000000033 INF: ===================Camera #2 Frame #111===================
17-02-28 20:21:14.068 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.144 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:21:14.144 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:21:14.144 -08 000000089 INF: ===================Camera #0 Frame #116===================
17-02-28 20:21:14.169 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:21:14.169 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:21:14.169 -08 000000033 INF: ===================Camera #2 Frame #117===================
17-02-28 20:21:14.207 -08 000000069 INF: Y Motor: Unshifted Position: 3858753
17-02-28 20:21:14.257 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.314 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:21:14.314 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:21:14.314 -08 000000089 INF: ===================Camera #0 Frame #123===================
17-02-28 20:21:14.340 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:21:14.340 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:21:14.340 -08 000000033 INF: ===================Camera #2 Frame #124===================
17-02-28 20:21:14.381 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.487 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:21:14.487 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:21:14.487 -08 000000089 INF: ===================Camera #0 Frame #129===================
17-02-28 20:21:14.514 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:21:14.514 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:21:14.514 -08 000000033 INF: ===================Camera #2 Frame #130===================
17-02-28 20:21:14.517 -08 000000069 INF: Y Motor: Unshifted Position: 3655303
17-02-28 20:21:14.567 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.657 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:21:14.657 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:21:14.657 -08 000000089 INF: ===================Camera #0 Frame #135===================
17-02-28 20:21:14.685 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:21:14.685 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:21:14.685 -08 000000033 INF: ===================Camera #2 Frame #136===================
17-02-28 20:21:14.694 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.826 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:21:14.826 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:21:14.826 -08 000000089 INF: ===================Camera #0 Frame #142===================
17-02-28 20:21:14.830 -08 000000069 INF: Y Motor: Unshifted Position: 3450330
17-02-28 20:21:14.856 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:21:14.856 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:21:14.856 -08 000000033 INF: ===================Camera #2 Frame #143===================
17-02-28 20:21:14.880 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:14.999 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:21:14.999 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:21:14.999 -08 000000089 INF: ===================Camera #0 Frame #148===================
17-02-28 20:21:15.004 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.046 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:21:15.046 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:21:15.047 -08 000000033 INF: ===================Camera #2 Frame #150===================
17-02-28 20:21:15.143 -08 000000069 INF: Y Motor: Unshifted Position: 3249272
17-02-28 20:21:15.169 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:21:15.169 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:21:15.169 -08 000000089 INF: ===================Camera #0 Frame #154===================
17-02-28 20:21:15.193 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.221 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:21:15.221 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:21:15.221 -08 000000033 INF: ===================Camera #2 Frame #156===================
17-02-28 20:21:15.317 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.339 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:21:15.339 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:21:15.339 -08 000000089 INF: ===================Camera #0 Frame #160===================
17-02-28 20:21:15.392 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:21:15.392 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:21:15.392 -08 000000033 INF: ===================Camera #2 Frame #162===================
17-02-28 20:21:15.453 -08 000000069 INF: Y Motor: Unshifted Position: 3046472
17-02-28 20:21:15.503 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.509 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:21:15.509 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:21:15.509 -08 000000089 INF: ===================Camera #0 Frame #167===================
17-02-28 20:21:15.563 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:21:15.563 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:21:15.563 -08 000000033 INF: ===================Camera #2 Frame #169===================
17-02-28 20:21:15.627 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.682 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:21:15.682 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:21:15.682 -08 000000089 INF: ===================Camera #0 Frame #173===================
17-02-28 20:21:15.737 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:21:15.737 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:21:15.737 -08 000000033 INF: ===================Camera #2 Frame #175===================
17-02-28 20:21:15.767 -08 000000069 INF: Y Motor: Unshifted Position: 2844332
17-02-28 20:21:15.817 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:15.852 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:21:15.852 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:21:15.852 -08 000000089 INF: ===================Camera #0 Frame #179===================
17-02-28 20:21:15.907 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:21:15.907 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:21:15.907 -08 000000033 INF: ===================Camera #2 Frame #181===================
17-02-28 20:21:15.941 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.022 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:21:16.022 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:21:16.022 -08 000000089 INF: ===================Camera #0 Frame #186===================
17-02-28 20:21:16.077 -08 000000069 INF: Y Motor: Unshifted Position: 2640662
17-02-28 20:21:16.078 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:21:16.078 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:21:16.078 -08 000000033 INF: ===================Camera #2 Frame #188===================
17-02-28 20:21:16.127 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.195 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:21:16.195 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:21:16.195 -08 000000089 INF: ===================Camera #0 Frame #192===================
17-02-28 20:21:16.251 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.252 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:21:16.252 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:21:16.252 -08 000000033 INF: ===================Camera #2 Frame #194===================
17-02-28 20:21:16.366 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:21:16.366 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:21:16.366 -08 000000089 INF: ===================Camera #0 Frame #198===================
17-02-28 20:21:16.391 -08 000000069 INF: Y Motor: Unshifted Position: 2437005
17-02-28 20:21:16.424 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:21:16.424 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:21:16.424 -08 000000033 INF: ===================Camera #2 Frame #200===================
17-02-28 20:21:16.441 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.536 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:21:16.536 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:21:16.536 -08 000000089 INF: ===================Camera #0 Frame #205===================
17-02-28 20:21:16.565 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.595 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:21:16.595 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:21:16.595 -08 000000033 INF: ===================Camera #2 Frame #207===================
17-02-28 20:21:16.704 -08 000000069 INF: Y Motor: Unshifted Position: 2235498
17-02-28 20:21:16.709 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:21:16.709 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:21:16.709 -08 000000089 INF: ===================Camera #0 Frame #211===================
17-02-28 20:21:16.754 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.769 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:21:16.769 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:21:16.769 -08 000000033 INF: ===================Camera #2 Frame #213===================
17-02-28 20:21:16.878 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:16.879 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:21:16.879 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:21:16.879 -08 000000089 INF: ===================Camera #0 Frame #217===================
17-02-28 20:21:16.939 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:21:16.939 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:21:16.939 -08 000000033 INF: ===================Camera #2 Frame #219===================
17-02-28 20:21:17.014 -08 000000069 INF: Y Motor: Unshifted Position: 2032053
17-02-28 20:21:17.048 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:21:17.048 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:21:17.048 -08 000000089 INF: ===================Camera #0 Frame #223===================
17-02-28 20:21:17.064 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.110 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:21:17.110 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:21:17.110 -08 000000033 INF: ===================Camera #2 Frame #226===================
17-02-28 20:21:17.188 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.218 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:21:17.218 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:21:17.218 -08 000000089 INF: ===================Camera #0 Frame #230===================
17-02-28 20:21:17.284 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:21:17.284 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:21:17.284 -08 000000033 INF: ===================Camera #2 Frame #232===================
17-02-28 20:21:17.327 -08 000000069 INF: Y Motor: Unshifted Position: 1828380
17-02-28 20:21:17.377 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.391 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:21:17.391 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:21:17.391 -08 000000089 INF: ===================Camera #0 Frame #236===================
17-02-28 20:21:17.455 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:21:17.455 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:21:17.455 -08 000000033 INF: ===================Camera #2 Frame #238===================
17-02-28 20:21:17.501 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.561 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:21:17.561 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:21:17.561 -08 000000089 INF: ===================Camera #0 Frame #242===================
17-02-28 20:21:17.626 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:21:17.626 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:21:17.626 -08 000000033 INF: ===================Camera #2 Frame #245===================
17-02-28 20:21:17.640 -08 000000069 INF: Y Motor: Unshifted Position: 1626881
17-02-28 20:21:17.690 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.731 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:21:17.731 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:21:17.731 -08 000000089 INF: ===================Camera #0 Frame #249===================
17-02-28 20:21:17.799 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:21:17.799 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:21:17.799 -08 000000033 INF: ===================Camera #2 Frame #251===================
17-02-28 20:21:17.812 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:17.904 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:21:17.904 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:21:17.904 -08 000000089 INF: ===================Camera #0 Frame #255===================
17-02-28 20:21:17.951 -08 000000069 INF: Y Motor: Unshifted Position: 1422557
17-02-28 20:21:17.970 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:21:17.970 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:21:17.970 -08 000000033 INF: ===================Camera #2 Frame #257===================
17-02-28 20:21:18.001 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.072 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:21:18.072 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:21:18.072 -08 000000089 INF: ===================Camera #0 Frame #261===================
17-02-28 20:21:18.125 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.141 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:21:18.141 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:21:18.141 -08 000000033 INF: ===================Camera #2 Frame #264===================
17-02-28 20:21:18.242 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:21:18.242 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:21:18.242 -08 000000089 INF: ===================Camera #0 Frame #267===================
17-02-28 20:21:18.264 -08 000000069 INF: Y Motor: Unshifted Position: 1220833
17-02-28 20:21:18.314 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.315 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:21:18.315 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:21:18.315 -08 000000033 INF: ===================Camera #2 Frame #270===================
17-02-28 20:21:18.386 -08 000000073 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:18.387 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:18.388 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:18.389 -08 000000058 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:18.389 -08 000000081 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:18.389 -08 000000058 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:18.389 -08 000000058 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:18.389 -08 000000058 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:18.389 -08 000000081 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:18.389 -08 000000081 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:18.390 -08 000000081 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:18.390 -08 000000058 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:18.392 -08 000000081 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:18.412 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:18.412 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:18.412 -08 000000089 INF: ===================Camera #0 Frame #272===================
17-02-28 20:21:18.428 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:18.429 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:18.438 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.574 -08 000000069 INF: Y Motor: Unshifted Position: 1017389
17-02-28 20:21:18.591 -08 000000089 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:18.591 -08 000000033 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:18.591 -08 000000033 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:18.591 -08 000000033 INF: ===================Camera #2 Frame #272===================
17-02-28 20:21:18.591 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:21:18.597 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:18.598 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:18.624 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:18.624 -08 000000089 INF: ======================================
17-02-28 20:21:18.761 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:21:18.761 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:21:18.761 -08 000000058 INF: Excitation Filter 2: Moved 107 steps in 371.5793 ms
17-02-28 20:21:18.761 -08 000000081 INF: Excitation Filter 1: Moved 107 steps in 371.4915 ms
17-02-28 20:21:18.761 -08 000000058 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.688 ms
17-02-28 20:21:18.761 -08 000000081 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6283 ms
17-02-28 20:21:18.761 -08 000000081 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.7314 ms
17-02-28 20:21:18.761 -08 000000058 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.8074 ms
17-02-28 20:21:18.761 -08 000000081 INF: ======================================
17-02-28 20:21:18.762 -08 000000058 INF: ======================================
17-02-28 20:21:18.763 -08 000000069 INF: Y Motor: Unshifted Position: 984869
17-02-28 20:21:18.763 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:18.763 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:18.763 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:18.764 -08 000000038 INF: ======================================
17-02-28 20:21:18.795 -08 000000033 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:18.795 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:21:18.825 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:18.825 -08 000000069 INF: Y Motor: Moved to 14.8487 after 7865 ms
17-02-28 20:21:18.825 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:18.829 -08 000000033 INF: ======================================
17-02-28 20:21:18.831 -08 000000025 INF: ===================Camera TDI===================
17-02-28 20:21:18.832 -08 000000025 INF: ======================================
17-02-28 20:21:18.887 -08 000000069 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:18.887 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:18.887 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:18.949 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:18.949 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:18.949 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:19.012 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:19.073 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:19.135 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.135 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:19.135 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:19.197 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.197 -08 000000069 INF: ======================================
17-02-28 20:21:19.198 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:19.199 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:19.200 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.200 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:19.261 -08 000000109 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:19.261 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:19.320 -08 000000035 INF: FPGA: Recv TDIYERD 1484869
17-02-28 20:21:19.320 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:19.385 -08 000000108 INF: FPGA: Recv ZADCR 21297
17-02-28 20:21:19.385 -08 000000018 INF: At scan end Y pos = 14.849 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:21:19.385 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:19.447 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:21:19.447 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:21:19.447 -08 000000018 INF: TDIScan finished after 11897.4141 ms
17-02-28 20:21:19.447 -08 000000018 INF: Image[0]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:19.447 -08 000000018 INF: Image[2]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:19.449 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.478 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.833 um
17-02-28 20:21:19.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.480 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:19.509 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:19.510 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.510 -08 000000036 INF: ===================Dither Clean Up Command===================
17-02-28 20:21:19.510 -08 000000072 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:19.511 -08 000000073 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:19.511 -08 000000053 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:19.511 -08 000000072 INF: ======================================
17-02-28 20:21:19.511 -08 000000053 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:19.511 -08 000000053 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:19.511 -08 000000073 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:19.511 -08 000000073 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:19.511 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:19.511 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:19.512 -08 000000051 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:21:19.515 -08 000000069 INF: ===================LFT:Extracting coords===================
17-02-28 20:21:19.540 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:19.541 -08 000000069 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:21:19.542 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.542 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.542 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.542 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.542 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:19.571 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:19.571 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:21:19.571 -08 000000051 INF: FPGA: Xmit ZDACW 20345\n
17-02-28 20:21:19.571 -08 000000053 INF: ======================================
17-02-28 20:21:19.573 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.573 -08 000000073 INF: ======================================
17-02-28 20:21:19.616 -08 000000052 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.616 -08 000000060 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.617 -08 000000075 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.617 -08 000000090 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:19.635 -08 000000101 INF: FPGA: Recv ZDACW 
17-02-28 20:21:19.636 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:21:19.636 -08 000000051 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:21:19.696 -08 000000053 INF: FPGA: Recv TDIBB
17-02-28 20:21:19.696 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:19.697 -08 000000051 INF: ======================================
17-02-28 20:21:19.768 -08 000000075 INF: LFT found best fwhm score 2.000133 in 151 ms
17-02-28 20:21:19.768 -08 000000060 INF: LFT found best fwhm score 2.000481 in 152 ms
17-02-28 20:21:19.768 -08 000000060 INF: LFT found good score at index 7085 with fwhm value 2.000481. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.768 -08 000000052 INF: LFT found best fwhm score 2.00012 in 152 ms
17-02-28 20:21:19.768 -08 000000052 INF: LFT found good score at index 1525 with fwhm value 2.00012. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.768 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.768 -08 000000090 INF: LFT found best fwhm score 2.000863 in 151 ms
17-02-28 20:21:19.768 -08 000000090 INF: LFT found good score at index 1461 with fwhm value 2.000863. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.768 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.768 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.768 -08 000000060 INF: ======================================
17-02-28 20:21:19.769 -08 000000052 INF: ======================================
17-02-28 20:21:19.769 -08 000000090 INF: ======================================
17-02-28 20:21:19.769 -08 000000075 INF: LFT found good score at index 1489 with fwhm value 2.000133. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:19.769 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:21:19.769 -08 000000075 INF: ======================================
17-02-28 20:21:19.771 -08 000000069 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:19.772 -08 000000069 INF: LFT weighted average best Z for bottom surface is at -0.058mm FC:A, C:3,L:8,B
17-02-28 20:21:19.772 -08 000000069 INF: ======================================
17-02-28 20:21:19.773 -08 000000036 INF: ======================================
17-02-28 20:21:19.774 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:19.775 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:19.776 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 24.92233 Y = 39.70494===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:21:19.777 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:21:19.800 -08 000000018 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:21:19.800 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:19.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:19.801 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:19.801 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:19.801 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:21:19.801 -08 000000018 INF: Transformed XStagePosition from 26.03033 mm to 26.0686294734478 mm.
17-02-28 20:21:19.813 -08 000000018 INF: Transformed StartingYStagePosition from 64.4949457397461 mm to 64.4973607397415 mm.
17-02-28 20:21:19.813 -08 000000018 INF: Transformed StartingYStageITFPosition from 64.2949457397461 mm to 64.2973607397415 mm.
17-02-28 20:21:19.813 -08 000000018 INF: Transformed TriggerYStagePosition from 63.3856957397461 mm to 63.3881107397415 mm.
17-02-28 20:21:19.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:19.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:19.816 -08 000000018 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -77.6 um, section = H_1
17-02-28 20:21:19.843 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":8,"Tile":2103,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF204","HCSMMF285","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.877 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:19.878 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:19.879 -08 000000081 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:19.881 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:21:19.881 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:19.881 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:19.882 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:19.883 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:19.883 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:19.883 -08 000000053 INF: ===================Move X Motor without settling===================
17-02-28 20:21:19.884 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:21:19.884 -08 000000053 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:19.884 -08 000000085 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:19.884 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:19.884 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:19.885 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:19.885 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:19.885 -08 000000101 INF: ======================================
17-02-28 20:21:19.885 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:21:19.886 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:19.887 -08 000000101 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:19.887 -08 000000101 INF: Y Motor: Moving to 64.4974 mm @25.000 mm/sec, started at 14.8487 mm
17-02-28 20:21:19.888 -08 000000101 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:19.888 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:19.889 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:19.889 -08 000000033 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:19.890 -08 000000033 INF: ======================================
17-02-28 20:21:19.890 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:19.891 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:19.892 -08 000000087 INF: ======================================
17-02-28 20:21:19.892 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:19.895 -08 000000036 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:19.897 -08 000000036 INF: ======================================
17-02-28 20:21:19.903 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:19.904 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:19.904 -08 000000069 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:19.904 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:19.904 -08 000000033 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:19.904 -08 000000036 INF: ======================================
17-02-28 20:21:19.905 -08 000000033 INF: ======================================
17-02-28 20:21:19.905 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:19.905 -08 000000069 INF: ======================================
17-02-28 20:21:19.906 -08 000000050 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:19.906 -08 000000052 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:19.906 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:21:19.906 -08 000000050 INF: ======================================
17-02-28 20:21:19.906 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:19.906 -08 000000087 INF: ======================================
17-02-28 20:21:19.907 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:19.907 -08 000000052 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:21:19.907 -08 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:19.908 -08 000000038 INF: ======================================
17-02-28 20:21:19.908 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:19.909 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:19.909 -08 000000025 INF: ======================================
17-02-28 20:21:19.909 -08 000000078 INF: ======================================
17-02-28 20:21:19.910 -08 000000081 INF: ======================================
17-02-28 20:21:19.911 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:19.960 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":8,"Tile":2104,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF210","HCSMMF273","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.962 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":8,"Tile":2110,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF184","HCSMMF255","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.962 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:21:19.963 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:19.964 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:19.964 -08 000000101 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:19.964 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:19.964 -08 000000052 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:21:19.964 -08 000000053 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:19.964 -08 000000053 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:19.972 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":8,"Tile":2102,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF200","HCSMMF197","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.976 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":8,"Tile":2105,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF201","HCSMMF269","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.984 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":8,"Tile":2107,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF251","HCSMMF209","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.991 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":8,"Tile":2101,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF275","HCSMMF217","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.993 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":8,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF177","HCSMMF266","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.994 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":8,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF253","HCSMMF250","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.997 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":8,"Tile":2106,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF268","HCSMMF182","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.998 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":8,"Tile":2112,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF227","HCSMMF203","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:19.999 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":8,"Tile":2114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF257","HCSMMF198","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.000 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":8,"Tile":2113,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF278","HCSMMF241","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.001 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":8,"Tile":2116,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF230","HCSMMF212","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.001 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":8,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF260","HCSMMF283","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.002 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":8,"Tile":2117,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF287","HCSMMF194","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.003 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":8,"Tile":2120,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF267","HCSMMF261","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.004 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":8,"Tile":2119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF265","HCSMMF282","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.005 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":8,"Tile":2118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF186","HCSMMF205","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.005 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":8,"Tile":2111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF263","HCSMMF280","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.006 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":8,"Tile":2123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF274","HCSMMF193","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.007 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":8,"Tile":2124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF258","HCSMMF222","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.008 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":8,"Tile":2128,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF245","HCSMMF229","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.010 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":8,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF231","HCSMMF188","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.010 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":8,"Tile":2126,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF196","HCSMMF232","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.011 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":8,"Tile":2125,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF180","HCSMMF220","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.024 -08 000000075 INF: FPGA: Recv TDIBB
17-02-28 20:21:20.024 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:20.026 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:20.026 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Moving to 26.0686 mm @15.000 mm/sec, started at 24.9692 mm
17-02-28 20:21:20.026 -08 000000052 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:20.026 -08 000000053 INF: X Motor: Xmit MA -13489\n
17-02-28 20:21:20.026 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.027 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":8,"Tile":2121,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF211","HCSMMF244","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.028 -08 000000052 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:21:20.028 -08 000000052 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:21:20.028 -08 000000052 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:21:20.029 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":8,"Tile":2122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF236","HCSMMF225","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:20.031 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.037 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:21:20.086 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:20.086 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:20.088 -08 000000053 INF: X Motor: Recv MA -13489\r\n>
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Set target position to 5949736 encoder counts
17-02-28 20:21:20.088 -08 000000101 INF: Y Motor: Xmit s r0xca 5949736\r
17-02-28 20:21:20.088 -08 000000052 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:20.088 -08 000000053 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:21:20.089 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.090 -08 000000052 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:20.090 -08 000000052 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:20.090 -08 000000052 INF: Z Motor: Arming to move to -0.0376 mm
17-02-28 20:21:20.090 -08 000000052 INF: FPGA: Xmit ZYT 6429736 4\n
17-02-28 20:21:20.148 -08 000000064 INF: FPGA: Recv ZYT 
17-02-28 20:21:20.148 -08 000000052 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1484869 enc / 14.849 mm / ) = 6429736 enc / 64.297 mm
17-02-28 20:21:20.148 -08 000000052 INF: FPGA: Xmit ZARM 9859\n
17-02-28 20:21:20.150 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:20.150 -08 000000101 INF: Y Motor: Start the move command
17-02-28 20:21:20.150 -08 000000101 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:20.202 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.202 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:21:20.210 -08 000000010 INF: FPGA: Recv ZARM
17-02-28 20:21:20.210 -08 000000052 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0644 ms
17-02-28 20:21:20.210 -08 000000052 INF: Z Motor: ArmAbsStepped took 119.7789 ms
17-02-28 20:21:20.210 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:20.212 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:20.212 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:20.212 -08 000000101 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:21:20.212 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.213 -08 000000052 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:20.214 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:20.215 -08 000000052 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:20.216 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:21:20.217 -08 000000052 INF: ======================================
17-02-28 20:21:20.239 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.245 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:21:20.336 -08 000000101 INF: Y Motor: Unshifted Position: 1066069
17-02-28 20:21:20.340 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.345 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:21:20.386 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.439 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.445 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:21:20.513 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.515 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:20.515 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:20.515 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:20.531 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:20.533 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:20.568 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:20.651 -08 000000101 INF: Y Motor: Unshifted Position: 1775702
17-02-28 20:21:20.701 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.712 -08 000000053 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:20.775 -08 000000053 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:20.775 -08 000000053 INF: X Motor: Moved to 26.0679 after 686 ms
17-02-28 20:21:20.775 -08 000000053 INF: ======================================
17-02-28 20:21:20.824 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:20.868 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:21:20.961 -08 000000101 INF: Y Motor: Unshifted Position: 2551550
17-02-28 20:21:21.011 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.135 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.143 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:21.143 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:21.143 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:21.159 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:21.161 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:21:21.163 -08 000000089 INF: ======================================
17-02-28 20:21:21.164 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:21.165 -08 000000085 INF: ======================================
17-02-28 20:21:21.274 -08 000000101 INF: Y Motor: Unshifted Position: 3336498
17-02-28 20:21:21.324 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.448 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.586 -08 000000101 INF: Y Motor: Unshifted Position: 4112407
17-02-28 20:21:21.636 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.760 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:21.898 -08 000000101 INF: Y Motor: Unshifted Position: 4897337
17-02-28 20:21:21.948 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.072 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.208 -08 000000101 INF: Y Motor: Unshifted Position: 5671972
17-02-28 20:21:22.258 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.385 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:22.522 -08 000000101 INF: Y Motor: Unshifted Position: 5949738
17-02-28 20:21:22.522 -08 000000101 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:22.522 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:22.586 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:22.586 -08 000000101 INF: Y Motor: Moved to 64.4974 after 2374 ms
17-02-28 20:21:22.586 -08 000000101 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:22.646 -08 000000101 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:22.646 -08 000000101 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:22.646 -08 000000101 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:22.710 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:22.710 -08 000000101 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:22.710 -08 000000101 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:22.770 -08 000000101 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: Recv v 0\r
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:22.832 -08 000000101 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:22.894 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:22.894 -08 000000101 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:22.894 -08 000000101 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:22.959 -08 000000101 INF: Y Motor: Recv ok\r
17-02-28 20:21:22.959 -08 000000101 INF: ======================================
17-02-28 20:21:22.960 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:21:22.961 -08 000000105 INF: ======================================
17-02-28 20:21:22.963 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:22.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:22.964 -08 000000018 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:21:22.964 -08 000000018 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:21:23.021 -08 000000018 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.021 -08 000000018 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:21:23.081 -08 000000078 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:23.081 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:23.082 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:23.082 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:23.143 -08 000000039 INF: FPGA: Recv TDIYERD 6449738
17-02-28 20:21:23.143 -08 000000018 INF: Before scan, Y encoder from FPGA = 6449738 counts (64.497 mm)
17-02-28 20:21:23.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:23.144 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:23.145 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:23.145 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:23.145 -08 000000089 INF: ======================================
17-02-28 20:21:23.146 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:23.146 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:23.147 -08 000000077 INF: FPGA: Xmit TDIYPOS 6338811\n
17-02-28 20:21:23.205 -08 000000109 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:23.205 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:23.207 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:23.207 -08 000000077 INF: FPGA: Xmit TDIYARM3 139264 6429736 1 1\n
17-02-28 20:21:23.267 -08 000000087 INF: FPGA: Recv TDIYARM3
17-02-28 20:21:23.267 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:23.268 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:23.269 -08 000000077 INF: ======================================
17-02-28 20:21:23.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:23.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:23.271 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.272 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.273 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.273 -08 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:23.273 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:23.274 -08 000000033 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:23.274 -08 000000033 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:23.274 -08 000000033 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:23.274 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:23.274 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:23.274 -08 000000085 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:23.274 -08 000000033 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:23.275 -08 000000085 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:23.641 -08 000000082 INF: FPGA: Recv EX1MV
17-02-28 20:21:23.641 -08 000000082 INF: FPGA: Recv EX2MV
17-02-28 20:21:23.641 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 367.2424 ms
17-02-28 20:21:23.641 -08 000000033 INF: Excitation Filter 1: Moved -107 steps in 367.5317 ms
17-02-28 20:21:23.641 -08 000000033 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6636 ms
17-02-28 20:21:23.641 -08 000000033 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7366 ms
17-02-28 20:21:23.641 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.3808 ms
17-02-28 20:21:23.642 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8898 ms
17-02-28 20:21:23.642 -08 000000033 INF: ======================================
17-02-28 20:21:23.642 -08 000000085 INF: ======================================
17-02-28 20:21:23.643 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:23.645 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:21:23.645 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:23.645 -08 000000064 INF: ===================FPGA Z Wait===================
17-02-28 20:21:23.645 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:23.646 -08 000000064 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:23.646 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:23.646 -08 000000047 INF: Y Motor: Moving to 14.8490 mm @6.500 mm/sec, started at 64.4974 mm
17-02-28 20:21:23.646 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:23.646 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:23.646 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:23.647 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:21:23.647 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:21:23.649 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.649 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.649 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:23.649 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.649 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.708 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.708 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:23.708 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:23.770 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.770 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:23.799 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.799 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.801 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.801 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Set target position to 984902 encoder counts
17-02-28 20:21:23.832 -08 000000047 INF: Y Motor: Xmit s r0xca 984902\r
17-02-28 20:21:23.894 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.894 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:21:23.894 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:23.949 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.949 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.951 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:23.951 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:23.956 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:23.956 -08 000000047 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:21:23.956 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.017 -08 000000066 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:24.017 -08 000000064 INF: ======================================
17-02-28 20:21:24.081 -08 000000047 INF: Y Motor: Unshifted Position: 5887232
17-02-28 20:21:24.099 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:24.099 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:24.099 -08 000000039 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:24.101 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:24.101 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:24.101 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:24.131 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.255 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.268 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:24.268 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:24.268 -08 000000051 INF: ===================Camera #2 Frame #11===================
17-02-28 20:21:24.272 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:24.272 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:24.272 -08 000000039 INF: ===================Camera #0 Frame #11===================
17-02-28 20:21:24.394 -08 000000047 INF: Y Motor: Unshifted Position: 5683564
17-02-28 20:21:24.438 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:24.438 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:24.438 -08 000000051 INF: ===================Camera #2 Frame #17===================
17-02-28 20:21:24.444 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.449 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:24.449 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:24.449 -08 000000039 INF: ===================Camera #0 Frame #17===================
17-02-28 20:21:24.568 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.611 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:24.611 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:24.611 -08 000000051 INF: ===================Camera #2 Frame #23===================
17-02-28 20:21:24.626 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:21:24.626 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:21:24.626 -08 000000039 INF: ===================Camera #0 Frame #24===================
17-02-28 20:21:24.704 -08 000000047 INF: Y Motor: Unshifted Position: 5482075
17-02-28 20:21:24.754 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.789 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:21:24.789 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:21:24.789 -08 000000051 INF: ===================Camera #2 Frame #30===================
17-02-28 20:21:24.797 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:21:24.797 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:21:24.797 -08 000000039 INF: ===================Camera #0 Frame #30===================
17-02-28 20:21:24.881 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:24.967 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:21:24.967 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:21:24.967 -08 000000039 INF: ===================Camera #0 Frame #36===================
17-02-28 20:21:24.970 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:21:24.970 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:21:24.970 -08 000000051 INF: ===================Camera #2 Frame #37===================
17-02-28 20:21:25.017 -08 000000047 INF: Y Motor: Unshifted Position: 5278399
17-02-28 20:21:25.067 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.137 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:21:25.137 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:21:25.137 -08 000000039 INF: ===================Camera #0 Frame #43===================
17-02-28 20:21:25.153 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:21:25.153 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:21:25.153 -08 000000051 INF: ===================Camera #2 Frame #43===================
17-02-28 20:21:25.191 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.319 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:21:25.319 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:21:25.319 -08 000000039 INF: ===================Camera #0 Frame #49===================
17-02-28 20:21:25.330 -08 000000047 INF: Y Motor: Unshifted Position: 5074947
17-02-28 20:21:25.331 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:21:25.331 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:21:25.331 -08 000000051 INF: ===================Camera #2 Frame #50===================
17-02-28 20:21:25.380 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.491 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:21:25.491 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:21:25.491 -08 000000039 INF: ===================Camera #0 Frame #56===================
17-02-28 20:21:25.503 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:21:25.503 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:21:25.503 -08 000000051 INF: ===================Camera #2 Frame #56===================
17-02-28 20:21:25.504 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.640 -08 000000047 INF: Y Motor: Unshifted Position: 4873235
17-02-28 20:21:25.663 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:21:25.663 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:21:25.663 -08 000000039 INF: ===================Camera #0 Frame #62===================
17-02-28 20:21:25.673 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:21:25.673 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:21:25.674 -08 000000051 INF: ===================Camera #2 Frame #62===================
17-02-28 20:21:25.690 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.817 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:25.832 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:21:25.832 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:21:25.832 -08 000000039 INF: ===================Camera #0 Frame #68===================
17-02-28 20:21:25.853 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:21:25.853 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:21:25.853 -08 000000051 INF: ===================Camera #2 Frame #69===================
17-02-28 20:21:25.954 -08 000000047 INF: Y Motor: Unshifted Position: 4669137
17-02-28 20:21:26.000 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:21:26.000 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:21:26.000 -08 000000039 INF: ===================Camera #0 Frame #75===================
17-02-28 20:21:26.004 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.037 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:21:26.037 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:21:26.037 -08 000000051 INF: ===================Camera #2 Frame #76===================
17-02-28 20:21:26.128 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.171 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:21:26.171 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:21:26.171 -08 000000039 INF: ===================Camera #0 Frame #81===================
17-02-28 20:21:26.219 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:21:26.219 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:21:26.219 -08 000000051 INF: ===================Camera #2 Frame #83===================
17-02-28 20:21:26.265 -08 000000047 INF: Y Motor: Unshifted Position: 4467406
17-02-28 20:21:26.316 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.341 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:21:26.341 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:21:26.341 -08 000000039 INF: ===================Camera #0 Frame #87===================
17-02-28 20:21:26.394 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:21:26.394 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:21:26.394 -08 000000051 INF: ===================Camera #2 Frame #89===================
17-02-28 20:21:26.442 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.510 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:21:26.510 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:21:26.510 -08 000000039 INF: ===================Camera #0 Frame #93===================
17-02-28 20:21:26.563 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:21:26.563 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:21:26.563 -08 000000051 INF: ===================Camera #2 Frame #95===================
17-02-28 20:21:26.578 -08 000000047 INF: Y Motor: Unshifted Position: 4263962
17-02-28 20:21:26.628 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.656 -08 000000075 INF: RunCopyService queue size at 2/28/2017 8:21:26 PM is 25
17-02-28 20:21:26.679 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:21:26.679 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:21:26.687 -08 000000039 INF: ===================Camera #0 Frame #99===================
17-02-28 20:21:26.732 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:21:26.732 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:21:26.732 -08 000000051 INF: ===================Camera #2 Frame #101===================
17-02-28 20:21:26.754 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:26.857 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:21:26.857 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:21:26.857 -08 000000039 INF: ===================Camera #0 Frame #106===================
17-02-28 20:21:26.891 -08 000000047 INF: Y Motor: Unshifted Position: 4060932
17-02-28 20:21:26.901 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:21:26.901 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:21:26.901 -08 000000051 INF: ===================Camera #2 Frame #108===================
17-02-28 20:21:26.941 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.028 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:21:27.028 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:21:27.028 -08 000000039 INF: ===================Camera #0 Frame #112===================
17-02-28 20:21:27.065 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.073 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:21:27.073 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:21:27.073 -08 000000051 INF: ===================Camera #2 Frame #114===================
17-02-28 20:21:27.197 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:21:27.197 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:21:27.197 -08 000000039 INF: ===================Camera #0 Frame #119===================
17-02-28 20:21:27.201 -08 000000047 INF: Y Motor: Unshifted Position: 3858789
17-02-28 20:21:27.242 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:21:27.242 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:21:27.242 -08 000000051 INF: ===================Camera #2 Frame #120===================
17-02-28 20:21:27.251 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.369 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:21:27.369 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:21:27.369 -08 000000039 INF: ===================Camera #0 Frame #125===================
17-02-28 20:21:27.378 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.411 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:21:27.411 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:21:27.411 -08 000000051 INF: ===================Camera #2 Frame #126===================
17-02-28 20:21:27.514 -08 000000047 INF: Y Motor: Unshifted Position: 3655120
17-02-28 20:21:27.538 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:21:27.538 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:21:27.538 -08 000000039 INF: ===================Camera #0 Frame #131===================
17-02-28 20:21:27.564 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.580 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:21:27.580 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:21:27.580 -08 000000051 INF: ===================Camera #2 Frame #133===================
17-02-28 20:21:27.688 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.709 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:21:27.709 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:21:27.709 -08 000000039 INF: ===================Camera #0 Frame #137===================
17-02-28 20:21:27.753 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:21:27.753 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:21:27.753 -08 000000051 INF: ===================Camera #2 Frame #139===================
17-02-28 20:21:27.828 -08 000000047 INF: Y Motor: Unshifted Position: 3453401
17-02-28 20:21:27.878 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:27.878 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:21:27.878 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:21:27.878 -08 000000039 INF: ===================Camera #0 Frame #144===================
17-02-28 20:21:27.923 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:21:27.923 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:21:27.923 -08 000000051 INF: ===================Camera #2 Frame #145===================
17-02-28 20:21:28.001 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.051 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:21:28.051 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:21:28.051 -08 000000039 INF: ===================Camera #0 Frame #150===================
17-02-28 20:21:28.094 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:21:28.094 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:21:28.094 -08 000000051 INF: ===================Camera #2 Frame #152===================
17-02-28 20:21:28.137 -08 000000047 INF: Y Motor: Unshifted Position: 3248653
17-02-28 20:21:28.187 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.219 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:21:28.219 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:21:28.219 -08 000000039 INF: ===================Camera #0 Frame #156===================
17-02-28 20:21:28.266 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:21:28.266 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:21:28.266 -08 000000051 INF: ===================Camera #2 Frame #158===================
17-02-28 20:21:28.314 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.387 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:21:28.387 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:21:28.387 -08 000000039 INF: ===================Camera #0 Frame #162===================
17-02-28 20:21:28.435 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:21:28.435 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:21:28.435 -08 000000051 INF: ===================Camera #2 Frame #164===================
17-02-28 20:21:28.450 -08 000000047 INF: Y Motor: Unshifted Position: 3046506
17-02-28 20:21:28.500 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.555 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:21:28.555 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:21:28.555 -08 000000039 INF: ===================Camera #0 Frame #169===================
17-02-28 20:21:28.604 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:21:28.604 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:21:28.604 -08 000000051 INF: ===================Camera #2 Frame #170===================
17-02-28 20:21:28.624 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.726 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:21:28.726 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:21:28.726 -08 000000039 INF: ===================Camera #0 Frame #175===================
17-02-28 20:21:28.763 -08 000000047 INF: Y Motor: Unshifted Position: 2844797
17-02-28 20:21:28.773 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:21:28.773 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:21:28.773 -08 000000051 INF: ===================Camera #2 Frame #177===================
17-02-28 20:21:28.813 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.894 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:21:28.894 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:21:28.894 -08 000000039 INF: ===================Camera #0 Frame #181===================
17-02-28 20:21:28.938 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:28.945 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:21:28.945 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:21:28.945 -08 000000051 INF: ===================Camera #2 Frame #183===================
17-02-28 20:21:29.062 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:21:29.062 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:21:29.062 -08 000000039 INF: ===================Camera #0 Frame #187===================
17-02-28 20:21:29.074 -08 000000047 INF: Y Motor: Unshifted Position: 2640694
17-02-28 20:21:29.114 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:21:29.114 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:21:29.114 -08 000000051 INF: ===================Camera #2 Frame #189===================
17-02-28 20:21:29.124 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.230 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:21:29.230 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:21:29.230 -08 000000039 INF: ===================Camera #0 Frame #193===================
17-02-28 20:21:29.248 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.282 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:21:29.282 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:21:29.282 -08 000000051 INF: ===================Camera #2 Frame #195===================
17-02-28 20:21:29.387 -08 000000047 INF: Y Motor: Unshifted Position: 2438990
17-02-28 20:21:29.398 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:21:29.398 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:21:29.398 -08 000000039 INF: ===================Camera #0 Frame #200===================
17-02-28 20:21:29.437 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.451 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:21:29.451 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:21:29.451 -08 000000051 INF: ===================Camera #2 Frame #202===================
17-02-28 20:21:29.561 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.569 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:21:29.569 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:21:29.569 -08 000000039 INF: ===================Camera #0 Frame #206===================
17-02-28 20:21:29.623 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:21:29.623 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:21:29.623 -08 000000051 INF: ===================Camera #2 Frame #208===================
17-02-28 20:21:29.698 -08 000000047 INF: Y Motor: Unshifted Position: 2235534
17-02-28 20:21:29.737 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:21:29.737 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:21:29.737 -08 000000039 INF: ===================Camera #0 Frame #212===================
17-02-28 20:21:29.748 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.792 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:21:29.792 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:21:29.792 -08 000000051 INF: ===================Camera #2 Frame #214===================
17-02-28 20:21:29.874 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:29.905 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:21:29.905 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:21:29.905 -08 000000039 INF: ===================Camera #0 Frame #218===================
17-02-28 20:21:29.961 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:21:29.961 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:21:29.961 -08 000000051 INF: ===================Camera #2 Frame #220===================
17-02-28 20:21:30.011 -08 000000047 INF: Y Motor: Unshifted Position: 2033167
17-02-28 20:21:30.061 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.073 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:21:30.073 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:21:30.074 -08 000000039 INF: ===================Camera #0 Frame #224===================
17-02-28 20:21:30.129 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:21:30.129 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:21:30.129 -08 000000051 INF: ===================Camera #2 Frame #227===================
17-02-28 20:21:30.185 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.242 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:21:30.242 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:21:30.242 -08 000000039 INF: ===================Camera #0 Frame #231===================
17-02-28 20:21:30.301 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:21:30.301 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:21:30.301 -08 000000051 INF: ===================Camera #2 Frame #233===================
17-02-28 20:21:30.321 -08 000000047 INF: Y Motor: Unshifted Position: 1829496
17-02-28 20:21:30.371 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.413 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:21:30.413 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:21:30.413 -08 000000039 INF: ===================Camera #0 Frame #237===================
17-02-28 20:21:30.470 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:21:30.470 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:21:30.470 -08 000000051 INF: ===================Camera #2 Frame #239===================
17-02-28 20:21:30.498 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.581 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:21:30.581 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:21:30.581 -08 000000039 INF: ===================Camera #0 Frame #243===================
17-02-28 20:21:30.634 -08 000000047 INF: Y Motor: Unshifted Position: 1626050
17-02-28 20:21:30.639 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:21:30.639 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:21:30.639 -08 000000051 INF: ===================Camera #2 Frame #245===================
17-02-28 20:21:30.684 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.749 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:21:30.749 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:21:30.749 -08 000000039 INF: ===================Camera #0 Frame #249===================
17-02-28 20:21:30.808 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:30.808 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:21:30.808 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:21:30.808 -08 000000051 INF: ===================Camera #2 Frame #252===================
17-02-28 20:21:30.917 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:21:30.917 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:21:30.917 -08 000000039 INF: ===================Camera #0 Frame #256===================
17-02-28 20:21:30.947 -08 000000047 INF: Y Motor: Unshifted Position: 1424327
17-02-28 20:21:30.982 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:21:30.982 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:21:30.982 -08 000000051 INF: ===================Camera #2 Frame #258===================
17-02-28 20:21:30.997 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.090 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:21:31.090 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:21:31.090 -08 000000039 INF: ===================Camera #0 Frame #262===================
17-02-28 20:21:31.121 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.153 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:21:31.153 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:21:31.153 -08 000000051 INF: ===================Camera #2 Frame #264===================
17-02-28 20:21:31.257 -08 000000047 INF: Y Motor: Unshifted Position: 1220870
17-02-28 20:21:31.260 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:21:31.260 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:21:31.260 -08 000000039 INF: ===================Camera #0 Frame #268===================
17-02-28 20:21:31.307 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.324 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:21:31.324 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:21:31.324 -08 000000051 INF: ===================Camera #2 Frame #271===================
17-02-28 20:21:31.379 -08 000000025 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:31.379 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:31.381 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:31.382 -08 000000010 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:31.382 -08 000000077 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:31.382 -08 000000010 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:31.382 -08 000000010 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:31.382 -08 000000010 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:31.382 -08 000000077 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:31.382 -08 000000010 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:31.382 -08 000000077 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:31.382 -08 000000077 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:31.383 -08 000000077 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:31.430 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:31.430 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:31.430 -08 000000039 INF: ===================Camera #0 Frame #272===================
17-02-28 20:21:31.433 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.443 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:31.444 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:31.570 -08 000000047 INF: Y Motor: Unshifted Position: 1017424
17-02-28 20:21:31.576 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:31.576 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:31.576 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:31.576 -08 000000051 INF: ===================Camera #2 Frame #272===================
17-02-28 20:21:31.576 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:21:31.579 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:31.580 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:31.610 -08 000000039 INF: ======================================
17-02-28 20:21:31.620 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:31.748 -08 000000051 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:31.748 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:21:31.754 -08 000000101 INF: FPGA: Recv EX1MV
17-02-28 20:21:31.754 -08 000000101 INF: FPGA: Recv EX2MV
17-02-28 20:21:31.754 -08 000000010 INF: Excitation Filter 1: Moved 107 steps in 372.0488 ms
17-02-28 20:21:31.754 -08 000000077 INF: Excitation Filter 2: Moved 107 steps in 371.8451 ms
17-02-28 20:21:31.754 -08 000000010 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.1522 ms
17-02-28 20:21:31.754 -08 000000010 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.2572 ms
17-02-28 20:21:31.754 -08 000000077 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0751 ms
17-02-28 20:21:31.754 -08 000000077 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2533 ms
17-02-28 20:21:31.755 -08 000000010 INF: ======================================
17-02-28 20:21:31.755 -08 000000077 INF: ======================================
17-02-28 20:21:31.756 -08 000000047 INF: Y Motor: Unshifted Position: 984900
17-02-28 20:21:31.756 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:31.756 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:31.756 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:31.757 -08 000000108 INF: ======================================
17-02-28 20:21:31.783 -08 000000051 INF: ======================================
17-02-28 20:21:31.784 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:21:31.785 -08 000000030 INF: ======================================
17-02-28 20:21:31.818 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:31.818 -08 000000047 INF: Y Motor: Moved to 14.8490 after 7861 ms
17-02-28 20:21:31.818 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:31.883 -08 000000047 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:31.883 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:31.883 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:31.945 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:31.945 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:31.945 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:32.007 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:32.069 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:32.131 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:32.131 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:32.131 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:32.193 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:32.193 -08 000000047 INF: ======================================
17-02-28 20:21:32.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:32.195 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, Scanning===================
17-02-28 20:21:32.196 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.196 -08 000000018 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:32.253 -08 000000035 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:32.253 -08 000000018 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:32.315 -08 000000053 INF: FPGA: Recv TDIYERD 1484904
17-02-28 20:21:32.315 -08 000000018 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:32.380 -08 000000033 INF: FPGA: Recv ZADCR 21465
17-02-28 20:21:32.380 -08 000000018 INF: At scan end Y pos = 14.849 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:21:32.380 -08 000000018 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:32.442 -08 000000087 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:21:32.442 -08 000000018 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:21:32.442 -08 000000018 INF: TDIScan finished after 12640.069 ms
17-02-28 20:21:32.442 -08 000000018 INF: Image[0]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:32.442 -08 000000018 INF: Image[2]: Y should trigger at 63.388 mm, 2nd row was at 64.297 mm (error = 0.909 mm)
17-02-28 20:21:32.444 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.479 -08 000000018 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.897 um
17-02-28 20:21:32.479 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.480 -08 000000018 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:32.503 -08 000000034 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:32.504 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.504 -08 000000064 INF: ===================Dither Clean Up Command===================
17-02-28 20:21:32.505 -08 000000053 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:32.505 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:32.505 -08 000000072 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:32.505 -08 000000053 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:32.505 -08 000000053 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:32.505 -08 000000086 INF: ======================================
17-02-28 20:21:32.505 -08 000000072 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:32.505 -08 000000072 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:32.505 -08 000000105 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:32.505 -08 000000047 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:32.506 -08 000000105 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:21:32.508 -08 000000047 INF: ===================LFT:Extracting coords===================
17-02-28 20:21:32.534 -08 000000047 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:32.534 -08 000000047 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:21:32.535 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.535 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.536 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.536 -08 000000081 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.536 -08 000000045 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:32.565 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:32.565 -08 000000010 INF: FPGA: Recv ZSEL 
17-02-28 20:21:32.565 -08 000000105 INF: FPGA: Xmit ZDACW 20345\n
17-02-28 20:21:32.565 -08 000000072 INF: ======================================
17-02-28 20:21:32.567 -08 000000053 INF: Y Motor: Recv ok\r
17-02-28 20:21:32.567 -08 000000053 INF: ======================================
17-02-28 20:21:32.610 -08 000000109 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.610 -08 000000081 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.610 -08 000000045 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.611 -08 000000087 INF: FC:A, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:32.627 -08 000000073 INF: FPGA: Recv ZDACW 
17-02-28 20:21:32.628 -08 000000105 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:21:32.628 -08 000000105 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:21:32.693 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:21:32.693 -08 000000105 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:32.694 -08 000000105 INF: ======================================
17-02-28 20:21:32.761 -08 000000081 INF: LFT found best fwhm score 2.000026 in 151 ms
17-02-28 20:21:32.761 -08 000000081 INF: LFT found good score at index 573 with fwhm value 2.000026. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:32.761 -08 000000045 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:21:32.761 -08 000000109 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:21:32.761 -08 000000045 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0578890523175129 in the next cycle, cycle 4 FC:A, C:3,L:8,B
17-02-28 20:21:32.761 -08 000000081 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.761 -08 000000109 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0578890523175129 in the next cycle, cycle 4 FC:A, C:3,L:8,B
17-02-28 20:21:32.761 -08 000000045 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.762 -08 000000081 INF: ======================================
17-02-28 20:21:32.762 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.762 -08 000000045 INF: ======================================
17-02-28 20:21:32.762 -08 000000109 INF: ======================================
17-02-28 20:21:32.762 -08 000000087 INF: LFT found best fwhm score 2.005434 in 151 ms
17-02-28 20:21:32.762 -08 000000087 INF: LFT found good score at index 8565 with fwhm value 2.005434. Next cycle, cycle 4 starting Z position for bottom surface is at -0.058 mm FC:A, C:3,L:8,B
17-02-28 20:21:32.762 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:21:32.763 -08 000000087 INF: ======================================
17-02-28 20:21:32.764 -08 000000047 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:32.765 -08 000000047 INF: LFT weighted average best Z for bottom surface is at -0.058mm FC:A, C:3,L:8,B
17-02-28 20:21:32.765 -08 000000047 INF: ======================================
17-02-28 20:21:32.766 -08 000000064 INF: ======================================
17-02-28 20:21:32.767 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:32.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.768 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Channels A, G, T, C===================
17-02-28 20:21:32.769 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:32.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:32.770 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494, Waiting for image analysis===================
17-02-28 20:21:32.771 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 26.03033 Y = 39.70494===================
17-02-28 20:21:32.771 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:21:32.771 -08 000000018 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:21:32.794 -08 000000018 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:21:32.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:32.794 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:32.794 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:32.795 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:21:32.795 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:21:32.795 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:21:32.795 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.796 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.797 -08 000000018 INF: EjectButton: EjectButton LED On
17-02-28 20:21:32.797 -08 000000018 INF: FPGA: Xmit LEDMODEPB 1\n
17-02-28 20:21:32.827 -08 000000010 INF: FPGA: Recv LEDMODEPB
17-02-28 20:21:32.830 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.831 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.832 -08 000000018 INF: LaserShutterArbiter: Request to Close; lock count was 0, will be 1
17-02-28 20:21:32.832 -08 000000018 INF: LaserShutter: Closing laser shutter
17-02-28 20:21:32.832 -08 000000018 INF: FPGA: Xmit SWLSRSHUT 0\n
17-02-28 20:21:32.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for analysis...===================
17-02-28 20:21:32.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for user to shut the door...===================
17-02-28 20:21:32.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for imaging module...===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for analysis...===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Waiting for user to shut the door...===================
17-02-28 20:21:32.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.842 -08 000000042 INF: EjectButton: EjectButton LED Off
17-02-28 20:21:32.842 -08 000000042 INF: FPGA: Xmit LEDMODEPB 0\n
17-02-28 20:21:32.843 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":8,"Tile":2201,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF236","HCSMMF226","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:32.948 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":8,"Tile":2202,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF199","HCSMMF181","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:32.948 -08 000000034 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:21:32.949 -08 000000034 INF: FPGA: Recv LEDMODEPB
17-02-28 20:21:32.950 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:32.951 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":8,"Tile":2205,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF193","HCSMMF180","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:32.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.049 -08 000000042 INF: LaserShutterArbiter: Request to Open; lock count was 1, will be 0
17-02-28 20:21:33.049 -08 000000042 INF: LaserShutter: Opening laser shutter
17-02-28 20:21:33.049 -08 000000042 INF: FPGA: Xmit SWLSRSHUT 1\n
17-02-28 20:21:33.049 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.051 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.051 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":8,"Tile":2203,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF220","HCSMMF229","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.095 -08 000000066 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:21:33.095 -08 000000025 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":8,"Tile":2206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF176","HCSMMF269","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.097 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":8,"Tile":2207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF230","HCSMMF190","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.101 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":8,"Tile":2208,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF274","HCSMMF203","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.104 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":8,"Tile":2209,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF243","HCSMMF246","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.105 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":8,"Tile":2210,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF206","HCSMMF209","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.107 -08 000000057 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":8,"Tile":2204,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF276","HCSMMF227","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.108 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":8,"Tile":2212,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF283","HCSMMF238","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.111 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":8,"Tile":2211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF275","HCSMMF221","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.113 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":8,"Tile":2213,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF261","HCSMMF259","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.115 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":8,"Tile":2219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF250","HCSMMF185","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.115 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":8,"Tile":2221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF215","HCSMMF282","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.116 -08 000000011 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":8,"Tile":2217,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF223","HCSMMF192","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.117 -08 000000053 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":8,"Tile":2215,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF186","HCSMMF252","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.118 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":8,"Tile":2214,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF267","HCSMMF258","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.119 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":8,"Tile":2218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF182","HCSMMF218","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.119 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":8,"Tile":2222,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF284","HCSMMF179","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.120 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":8,"Tile":2220,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF247","HCSMMF204","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.121 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":8,"Tile":2223,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF279","HCSMMF240","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.122 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":8,"Tile":2226,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF210","HCSMMF219","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.122 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":8,"Tile":2216,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF265","HCSMMF281","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.123 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":8,"Tile":2224,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF278","HCSMMF178","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.124 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":8,"Tile":2225,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF280","HCSMMF231","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.125 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":8,"Tile":2228,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF239","HCSMMF194","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.127 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #3===================
17-02-28 20:21:33.128 -08 000000081 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":8,"Tile":2227,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF183","HCSMMF255","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:33.128 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX)===================
17-02-28 20:21:33.138 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.145 -08 000000011 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:21:33.195 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:21:33.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.196 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:21:33.196 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:21:33.243 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.243 -08 000000011 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:21:33.279 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.285 -08 000000011 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:21:33.359 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.365 -08 000000011 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:21:33.485 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.491 -08 000000011 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:21:33.581 -08 000000011 INF: ===================Image Analysis Flow Cell A 01, MMFProcessing===================
17-02-28 20:21:33.597 -08 000000025 INF: FPGA: Recv MIOCOMPF
17-02-28 20:21:33.597 -08 000000042 INF: Compensator: Moved IntoPath in 401 ms
17-02-28 20:21:33.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:33.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:33.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:33.599 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:33.600 -08 000000073 INF: ===================Move Tilt Motor 1===================
17-02-28 20:21:33.600 -08 000000069 INF: ===================Move Tilt Motor 3===================
17-02-28 20:21:33.600 -08 000000073 INF: Tilt Motor 1: Moving to 4.9990 mm, started at 5.0731 mm, delta = -0.0742 mm
17-02-28 20:21:33.600 -08 000000046 INF: ===================Move Tilt Motor 2===================
17-02-28 20:21:33.600 -08 000000069 INF: Tilt Motor 3: Moving to 5.3404 mm, started at 5.3317 mm, delta = 0.0086 mm
17-02-28 20:21:33.600 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:33.600 -08 000000046 INF: Tilt Motor 2: Moving to 5.3939 mm, started at 5.3053 mm, delta = 0.0886 mm
17-02-28 20:21:33.603 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.604 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.659 -08 000000023 INF: FPGA: Recv T1RD 19973
17-02-28 20:21:33.659 -08 000000023 INF: FPGA: Recv T3RD 20990
17-02-28 20:21:33.659 -08 000000023 INF: FPGA: Recv T2RD 20887
17-02-28 20:21:33.659 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3481 + 1/6
17-02-28 20:21:33.659 -08 000000046 INF: Tilt Motor 2: Moving to 21236 encoder counts
17-02-28 20:21:33.659 -08 000000046 INF: FPGA: Xmit T2MOVETO 21236\n
17-02-28 20:21:33.659 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3328 + 5/6
17-02-28 20:21:33.659 -08 000000073 INF: Tilt Motor 1: Moving to 19681 encoder counts
17-02-28 20:21:33.659 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3498 + 2/6
17-02-28 20:21:33.659 -08 000000069 INF: Tilt Motor 3: Moving to 21025 encoder counts
17-02-28 20:21:33.660 -08 000000069 INF: FPGA: Xmit T3MOVETO 21025\n
17-02-28 20:21:33.662 -08 000000073 INF: FPGA: Xmit T1MOVETO 19681\n
17-02-28 20:21:33.785 -08 000000087 INF: FPGA: Recv T3MOVETO 5
17-02-28 20:21:33.786 -08 000000069 INF: Tilt Motor 3: To move from 5.331 to 5.340 (0.009 mm) should take 6 steps, but required 5 steps (0.008 mm). Slippage = -0.002 mm (-0.18%)
17-02-28 20:21:33.786 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.846 -08 000000034 INF: FPGA: Recv T3RD 21021
17-02-28 20:21:33.846 -08 000000034 INF: FPGA: Recv T1MOVETO 48
17-02-28 20:21:33.846 -08 000000034 INF: FPGA: Recv T2MOVETO 57
17-02-28 20:21:33.846 -08 000000046 INF: Tilt Motor 2: To move from 5.305 to 5.394 (0.089 mm) should take 58 steps, but required 57 steps (0.087 mm). Slippage = -0.002 mm (-0.02%)
17-02-28 20:21:33.846 -08 000000073 INF: Tilt Motor 1: To move from 5.073 to 4.999 (-0.074 mm) should take 49 steps, but required 48 steps (0.073 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:21:33.846 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.846 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:21:33.847 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.849 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:33.863 -08 000000011 INF: ===================Image Analysis Flow Cell A 01===================
17-02-28 20:21:33.907 -08 000000101 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:33.907 -08 000000101 INF: FPGA: Recv T3RD 21020
17-02-28 20:21:33.907 -08 000000101 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:33.907 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:33.907 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:21:33.907 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:33.907 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:33.910 -08 000000069 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:33.911 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.969 -08 000000074 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:33.969 -08 000000074 INF: FPGA: Recv T3RD 21020
17-02-28 20:21:33.969 -08 000000074 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:33.969 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:33.969 -08 000000046 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:33.969 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:33.970 -08 000000069 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:21:33.970 -08 000000069 INF: Tilt Motor 3: After move to 5.3404, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:33.970 -08 000000069 INF: Tilt Motor 3: Moved to 5.3391 after 370.0298 ms
17-02-28 20:21:33.971 -08 000000069 INF: ======================================
17-02-28 20:21:33.972 -08 000000073 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:34.031 -08 000000082 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:34.031 -08 000000082 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:34.031 -08 000000073 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:34.031 -08 000000073 INF: Tilt Motor 1: After move to 4.9990, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.031 -08 000000046 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:34.031 -08 000000046 INF: Tilt Motor 2: After move to 5.3939, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.031 -08 000000073 INF: Tilt Motor 1: Moved to 5.0005 after 431.4091 ms
17-02-28 20:21:34.032 -08 000000046 INF: Tilt Motor 2: Moved to 5.3924 after 431.3114 ms
17-02-28 20:21:34.032 -08 000000073 INF: ======================================
17-02-28 20:21:34.032 -08 000000046 INF: ======================================
17-02-28 20:21:34.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:34.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Aligning===================
17-02-28 20:21:34.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:34.034 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:21:34.050 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.050 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.051 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:34.051 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:34.099 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:21:34.099 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.099 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:21:34.099 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:21:34.180 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4===================
17-02-28 20:21:34.181 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle===================
17-02-28 20:21:34.181 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:34.182 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:34.182 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:34.182 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:34.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:34.220 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Selecting Reagent HB2 (5)===================
17-02-28 20:21:34.220 -08 000000018 INF: Valve A1: Go to position 5
17-02-28 20:21:34.220 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 3\r
17-02-28 20:21:34.285 -08 000000018 INF: Valve A1: 631.158 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:21:34.285 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 3 to 5
17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW5\r
17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:21:34.285 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:21:34.470 -08 000000104 INF: FPGA: Recv MIOCOMPR
17-02-28 20:21:34.470 -08 000000042 INF: Compensator: Moved OutOfPath in 371 ms
17-02-28 20:21:34.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.472 -08 000000086 INF: ===================Move Tilt Motor 1===================
17-02-28 20:21:34.472 -08 000000066 INF: ===================Move Tilt Motor 3===================
17-02-28 20:21:34.472 -08 000000086 INF: Tilt Motor 1: Moving to 5.0768 mm, started at 5.0005 mm, delta = 0.0763 mm
17-02-28 20:21:34.472 -08 000000086 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:34.472 -08 000000066 INF: Tilt Motor 3: Moving to 5.2105 mm, started at 5.3391 mm, delta = -0.1286 mm
17-02-28 20:21:34.473 -08 000000058 INF: ===================Move Tilt Motor 2===================
17-02-28 20:21:34.473 -08 000000058 INF: Tilt Motor 2: Moving to 5.2636 mm, started at 5.3924 mm, delta = -0.1288 mm
17-02-28 20:21:34.474 -08 000000058 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:34.475 -08 000000066 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:34.532 -08 000000051 INF: FPGA: Recv T1RD 19687
17-02-28 20:21:34.532 -08 000000051 INF: FPGA: Recv T2RD 21230
17-02-28 20:21:34.532 -08 000000051 INF: FPGA: Recv T3RD 21020
17-02-28 20:21:34.532 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3503 + 2/6
17-02-28 20:21:34.532 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:21:34.532 -08 000000086 INF: Tilt Motor 1: Moving to 19987 encoder counts
17-02-28 20:21:34.532 -08 000000066 INF: Tilt Motor 3: Moving to 20514 encoder counts
17-02-28 20:21:34.532 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:21:34.532 -08 000000058 INF: Tilt Motor 2: Moving to 20723 encoder counts
17-02-28 20:21:34.532 -08 000000086 INF: FPGA: Xmit T1MOVETO 19987\n
17-02-28 20:21:34.535 -08 000000066 INF: FPGA: Xmit T3MOVETO 20514\n
17-02-28 20:21:34.536 -08 000000058 INF: FPGA: Xmit T2MOVETO 20723\n
17-02-28 20:21:34.657 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 5\r
17-02-28 20:21:34.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:34.657 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:21:34.718 -08 000000045 INF: FPGA: Recv T1MOVETO 50
17-02-28 20:21:34.718 -08 000000086 INF: Tilt Motor 1: To move from 5.000 to 5.077 (0.076 mm) should take 50 steps, but required 50 steps (0.076 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:21:34.718 -08 000000086 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:34.780 -08 000000057 INF: FPGA: Recv T1RD 19985
17-02-28 20:21:34.780 -08 000000057 INF: FPGA: Recv T3MOVETO 84
17-02-28 20:21:34.780 -08 000000057 INF: FPGA: Recv T2MOVETO 84
17-02-28 20:21:34.780 -08 000000058 INF: Tilt Motor 2: To move from 5.392 to 5.264 (-0.129 mm) should take 84 steps, but required 84 steps (0.128 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:21:34.780 -08 000000058 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:34.780 -08 000000066 INF: Tilt Motor 3: To move from 5.339 to 5.210 (-0.129 mm) should take 84 steps, but required 84 steps (0.128 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:21:34.780 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:21:34.781 -08 000000086 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:34.783 -08 000000066 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:34.842 -08 000000087 INF: FPGA: Recv T2RD 20725
17-02-28 20:21:34.842 -08 000000087 INF: FPGA: Recv T1RD 19985
17-02-28 20:21:34.842 -08 000000087 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:34.842 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:21:34.842 -08 000000086 INF: FPGA: Xmit T1RD\n
17-02-28 20:21:34.842 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:34.842 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6
17-02-28 20:21:34.843 -08 000000058 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:34.845 -08 000000066 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:34.908 -08 000000108 INF: FPGA: Recv T1RD 19985
17-02-28 20:21:34.908 -08 000000108 INF: FPGA: Recv T2RD 20725
17-02-28 20:21:34.908 -08 000000108 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:34.908 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:34.908 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6
17-02-28 20:21:34.908 -08 000000066 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:34.909 -08 000000086 INF: Tilt Motor 1: Encoder: at motor step 3330 + 5/6
17-02-28 20:21:34.909 -08 000000086 INF: Tilt Motor 1: After move to 5.0768, error = -0.0006, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.909 -08 000000086 INF: Tilt Motor 1: Moved to 5.0762 after 436.4015 ms
17-02-28 20:21:34.909 -08 000000086 INF: ======================================
17-02-28 20:21:34.911 -08 000000058 INF: FPGA: Xmit T2RD\n
17-02-28 20:21:34.975 -08 000000095 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:34.975 -08 000000095 INF: FPGA: Recv T2RD 20725
17-02-28 20:21:34.975 -08 000000066 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:34.976 -08 000000066 INF: Tilt Motor 3: After move to 5.2105, error = 0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.976 -08 000000066 INF: Tilt Motor 3: Moved to 5.2113 after 503.2647 ms
17-02-28 20:21:34.976 -08 000000058 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6
17-02-28 20:21:34.976 -08 000000058 INF: Tilt Motor 2: After move to 5.2636, error = 0.0006, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:34.976 -08 000000058 INF: Tilt Motor 2: Moved to 5.2642 after 503.2529 ms
17-02-28 20:21:34.976 -08 000000066 INF: ======================================
17-02-28 20:21:34.976 -08 000000058 INF: ======================================
17-02-28 20:21:34.977 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.978 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:34.979 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07675395464298, m2=5.2635772251359, m3=5.2104912251359
17-02-28 20:21:34.985 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:21:34.993 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:21:34.993 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:21:34.994 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:21:34.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:34.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:34.998 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:21:34.998 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:21:34.998 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:21:35.032 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:35.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:35.033 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:35.033 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.0776 mm
17-02-28 20:21:35.033 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:21:35.094 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:21:35.094 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:21:35.156 -08 000000046 INF: FPGA: Recv ZYT 
17-02-28 20:21:35.156 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:21:35.156 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:21:35.218 -08 000000078 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:21:35.218 -08 000000078 INF: FPGA: Recv ZMV 
17-02-28 20:21:35.218 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:21:35.218 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.007 ms
17-02-28 20:21:35.218 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:21:35.280 -08 000000072 INF: FPGA: Recv ZDACR 60292
17-02-28 20:21:35.280 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.3113 ms w/comms
17-02-28 20:21:35.280 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:35.280 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.5018 ms
17-02-28 20:21:35.281 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:35.281 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:21:35.290 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:21:35.290 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:21:35.290 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:21:35.290 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:21:35.290 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:21:35.340 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:35.341 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:35.341 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:35.342 -08 000000059 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:35.352 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:35.353 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:21:35.361 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:21:35.361 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:21:35.361 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:35.364 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-02-28 20:21:35.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:35.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:35.366 -08 000000034 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:35.366 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:21:35.366 -08 000000105 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:35.366 -08 000000073 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:35.366 -08 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:35.367 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:35.367 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:35.367 -08 000000046 INF: ===================Move X Motor without settling===================
17-02-28 20:21:35.367 -08 000000108 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:35.367 -08 000000073 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:35.367 -08 000000046 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:35.367 -08 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:35.368 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:35.368 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:35.368 -08 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:35.368 -08 000000085 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:35.368 -08 000000108 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.8490 mm
17-02-28 20:21:35.368 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:35.368 -08 000000108 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:35.368 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:35.368 -08 000000069 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:35.369 -08 000000036 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:35.369 -08 000000010 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:35.369 -08 000000072 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:35.369 -08 000000099 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:35.369 -08 000000045 INF: ======================================
17-02-28 20:21:35.369 -08 000000069 INF: ======================================
17-02-28 20:21:35.369 -08 000000036 INF: ======================================
17-02-28 20:21:35.370 -08 000000099 INF: ======================================
17-02-28 20:21:35.370 -08 000000010 INF: ======================================
17-02-28 20:21:35.370 -08 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:35.371 -08 000000090 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:35.371 -08 000000085 INF: ======================================
17-02-28 20:21:35.371 -08 000000082 INF: ======================================
17-02-28 20:21:35.372 -08 000000089 INF: ======================================
17-02-28 20:21:35.372 -08 000000072 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:35.372 -08 000000072 INF: ======================================
17-02-28 20:21:35.373 -08 000000090 INF: ======================================
17-02-28 20:21:35.373 -08 000000073 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:35.373 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:35.374 -08 000000073 INF: ======================================
17-02-28 20:21:35.375 -08 000000047 INF: ======================================
17-02-28 20:21:35.376 -08 000000034 INF: ======================================
17-02-28 20:21:35.405 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:35.406 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:21:35.406 -08 000000108 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:35.406 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:35.406 -08 000000046 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:35.406 -08 000000046 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:35.413 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:21:35.468 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:21:35.468 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Moving to 69.1856 mm @15.000 mm/sec, started at 26.0679 mm
17-02-28 20:21:35.468 -08 000000046 INF: X Motor: Xmit MA 4172\n
17-02-28 20:21:35.505 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:21:35.534 -08 000000046 INF: X Motor: Recv MA 4172\r\n>
17-02-28 20:21:35.534 -08 000000046 INF: X Motor: WaitUntilStopped 62875
17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:21:35.536 -08 000000108 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:21:35.595 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:21:35.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:21:35.595 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:21:35.595 -08 000000108 INF: Y Motor: Start the move command
17-02-28 20:21:35.595 -08 000000108 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:35.659 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:21:35.659 -08 000000108 INF: Y Motor: WaitUntilStopped 61987
17-02-28 20:21:35.659 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:35.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:21:35.781 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:35.784 -08 000000108 INF: Y Motor: Unshifted Position: 1067671
17-02-28 20:21:35.834 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:35.881 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:35.905 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:35.956 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.092 -08 000000108 INF: Y Motor: Unshifted Position: 1769891
17-02-28 20:21:36.142 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.155 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:36.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:36.268 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.319 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:21:36.406 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:36.407 -08 000000108 INF: Y Motor: Unshifted Position: 2554908
17-02-28 20:21:36.457 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:36.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:36.530 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Aspirating port PortB===================
17-02-28 20:21:36.581 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP18240R\r
17-02-28 20:21:36.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:36.718 -08 000000108 INF: Y Motor: Unshifted Position: 3333210
17-02-28 20:21:36.771 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:36.893 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:36.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:37.029 -08 000000108 INF: Y Motor: Unshifted Position: 4123262
17-02-28 20:21:37.079 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:37.157 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:37.206 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:37.216 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:37.343 -08 000000108 INF: Y Motor: Unshifted Position: 4891514
17-02-28 20:21:37.393 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:37.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:37.517 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:37.529 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:37.653 -08 000000108 INF: Y Motor: Unshifted Position: 5670643
17-02-28 20:21:37.703 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:37.779 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:37.830 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:37.841 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:37.965 -08 000000108 INF: Y Motor: Unshifted Position: 5953350
17-02-28 20:21:37.965 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:37.965 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:38.028 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:21:38.028 -08 000000108 INF: Y Motor: Moved to 64.5335 after 2368 ms
17-02-28 20:21:38.028 -08 000000108 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:38.090 -08 000000108 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:38.090 -08 000000108 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:38.090 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:38.091 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:38.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:38.155 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:21:38.155 -08 000000108 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:38.155 -08 000000108 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:38.217 -08 000000108 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:38.279 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:38.341 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:21:38.341 -08 000000108 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:38.341 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:38.402 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:21:38.402 -08 000000108 INF: ======================================
17-02-28 20:21:38.404 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:38.463 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:38.715 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:38.775 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:38.965 -08 000000046 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:39.032 -08 000000046 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:39.032 -08 000000046 INF: X Motor: Moved to 69.1855 after 3497 ms
17-02-28 20:21:39.032 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:39.032 -08 000000046 INF: ======================================
17-02-28 20:21:39.034 -08 000000105 INF: ===================Move X,Y===================
17-02-28 20:21:39.036 -08 000000105 INF: ======================================
17-02-28 20:21:39.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:39.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:39.038 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:21:39.038 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:21:39.089 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:39.093 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:21:39.093 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:21:39.151 -08 000000023 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:39.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:39.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:39.152 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:39.212 -08 000000099 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:21:39.212 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:21:39.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:39.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:39.214 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:21:39.214 -08 000000101 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:39.215 -08 000000101 INF: ======================================
17-02-28 20:21:39.215 -08 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:39.215 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:21:39.217 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:39.217 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:39.217 -08 000000045 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:21:39.277 -08 000000066 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:39.277 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:39.279 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:39.279 -08 000000045 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:21:39.336 -08 000000082 INF: FPGA: Recv TDIYARM2
17-02-28 20:21:39.336 -08 000000045 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:21:39.337 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:21:39.339 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:39.339 -08 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:39.339 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:21:39.341 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:21:39.342 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:39.342 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:39.401 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:39.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:39.709 -08 000000045 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:21:39.709 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:21:39.709 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:39.712 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:39.724 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:39.726 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:39.962 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:40.025 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:40.107 -08 000000045 INF: Camera #2 AttachBuffer (imageDataPtr = 53895782648 imgPtr = 53955604608 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:21:40.107 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:21:40.107 -08 000000045 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:40.122 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:21:40.124 -08 000000045 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:21:40.125 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:21:40.126 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:40.127 -08 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:40.127 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:40.129 -08 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:40.129 -08 000000045 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:40.129 -08 000000045 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:21:40.129 -08 000000045 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:21:40.151 -08 000000099 INF: FPGA: Recv ZYT 
17-02-28 20:21:40.152 -08 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:21:40.152 -08 000000045 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:21:40.211 -08 000000047 INF: FPGA: Recv ZARM
17-02-28 20:21:40.211 -08 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.4386 ms
17-02-28 20:21:40.211 -08 000000045 INF: Z Motor: ArmAbsStepped took 82.2816 ms
17-02-28 20:21:40.212 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:40.213 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:21:40.214 -08 000000045 INF: ======================================
17-02-28 20:21:40.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:40.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:40.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:40.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:40.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:40.218 -08 000000073 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:40.218 -08 000000073 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:40.218 -08 000000073 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:40.218 -08 000000046 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:40.218 -08 000000073 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:40.218 -08 000000073 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:40.218 -08 000000046 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:40.218 -08 000000046 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:40.218 -08 000000046 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:40.221 -08 000000046 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:40.275 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:40.336 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:40.585 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:21:40.585 -08 000000073 INF: Excitation Filter 2: Moved -107 steps in 366.8873 ms
17-02-28 20:21:40.585 -08 000000073 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.0131 ms
17-02-28 20:21:40.585 -08 000000073 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.0903 ms
17-02-28 20:21:40.585 -08 000000073 INF: ======================================
17-02-28 20:21:40.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:40.648 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:40.649 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:21:40.650 -08 000000046 INF: Excitation Filter 1: Moved -107 steps in 431.1898 ms
17-02-28 20:21:40.650 -08 000000046 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 431.3524 ms
17-02-28 20:21:40.650 -08 000000046 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.4296 ms
17-02-28 20:21:40.650 -08 000000046 INF: ======================================
17-02-28 20:21:40.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:40.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:40.654 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:21:40.654 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:40.654 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:40.654 -08 000000066 INF: ===================Serial===================
17-02-28 20:21:40.654 -08 000000047 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:21:40.654 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:40.654 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:40.654 -08 000000035 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:40.654 -08 000000095 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:40.655 -08 000000095 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:40.655 -08 000000066 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:21:40.655 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:21:40.655 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:21:40.656 -08 000000066 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:40.656 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:40.656 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:40.657 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:40.657 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:40.713 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:40.713 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:40.713 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:40.775 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:40.775 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:40.806 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:40.806 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:40.807 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:40.807 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:21:40.836 -08 000000047 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:21:40.898 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:40.898 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:40.898 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:21:40.898 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:40.956 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:40.956 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:40.957 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:40.957 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:40.959 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:40.960 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:40.960 -08 000000047 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:21:40.960 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.085 -08 000000047 INF: Y Motor: Unshifted Position: 5935084
17-02-28 20:21:41.106 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:41.106 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:41.107 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:41.107 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:41.135 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.209 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:41.256 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:21:41.256 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:21:41.256 -08 000000037 INF: ===================Camera #2 Frame #1===================
17-02-28 20:21:41.257 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:21:41.257 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:21:41.257 -08 000000090 INF: ===================Camera #0 Frame #1===================
17-02-28 20:21:41.260 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:41.400 -08 000000047 INF: Y Motor: Unshifted Position: 5888277
17-02-28 20:21:41.410 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:21:41.410 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:21:41.410 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:21:41.410 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:21:41.410 -08 000000090 INF: ===================Camera #0 Frame #3===================
17-02-28 20:21:41.410 -08 000000037 INF: ===================Camera #2 Frame #3===================
17-02-28 20:21:41.450 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.523 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:41.566 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:21:41.566 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:21:41.566 -08 000000090 INF: ===================Camera #0 Frame #4===================
17-02-28 20:21:41.567 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:21:41.567 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:21:41.567 -08 000000037 INF: ===================Camera #2 Frame #4===================
17-02-28 20:21:41.572 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:41.711 -08 000000047 INF: Y Motor: Unshifted Position: 5841420
17-02-28 20:21:41.719 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:41.719 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:41.719 -08 000000090 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:41.721 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:41.721 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:41.721 -08 000000037 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:41.761 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.771 -08 000000030 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:41.771 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:41.771 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:41.771 -08 000000066 INF: ===================Serial===================
17-02-28 20:21:41.773 -08 000000095 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:41.773 -08 000000066 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:21:41.773 -08 000000066 INF: ===================Serial===================
17-02-28 20:21:41.774 -08 000000051 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:41.774 -08 000000085 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:41.774 -08 000000051 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:41.774 -08 000000051 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:41.774 -08 000000051 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:41.774 -08 000000051 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:41.774 -08 000000085 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:41.774 -08 000000085 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:41.774 -08 000000085 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:41.774 -08 000000066 INF: ======================================
17-02-28 20:21:41.775 -08 000000085 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:41.835 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:41.872 -08 000000090 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:21:41.872 -08 000000090 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:21:41.872 -08 000000090 INF: ===================Camera #0 Frame #6===================
17-02-28 20:21:41.874 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:21:41.874 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:21:41.874 -08 000000037 INF: ===================Camera #2 Frame #6===================
17-02-28 20:21:41.875 -08 000000090 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:21:41.876 -08 000000090 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:41.877 -08 000000037 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:21:41.878 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:41.885 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:41.897 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:41.899 -08 000000090 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:41.899 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:21:41.900 -08 000000090 INF: ======================================
17-02-28 20:21:41.925 -08 000000037 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:41.925 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:21:41.927 -08 000000037 INF: ======================================
17-02-28 20:21:41.928 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:21:41.929 -08 000000035 INF: ======================================
17-02-28 20:21:42.021 -08 000000047 INF: Y Motor: Unshifted Position: 5797064
17-02-28 20:21:42.071 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:42.146 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:21:42.146 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:21:42.146 -08 000000085 INF: Excitation Filter 2: Moved 107 steps in 371.9032 ms
17-02-28 20:21:42.146 -08 000000051 INF: Excitation Filter 1: Moved 107 steps in 372.1347 ms
17-02-28 20:21:42.146 -08 000000051 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.2488 ms
17-02-28 20:21:42.146 -08 000000051 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.321 ms
17-02-28 20:21:42.146 -08 000000085 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0192 ms
17-02-28 20:21:42.146 -08 000000085 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.4385 ms
17-02-28 20:21:42.146 -08 000000051 INF: ======================================
17-02-28 20:21:42.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:42.147 -08 000000085 INF: ======================================
17-02-28 20:21:42.148 -08 000000095 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:42.149 -08 000000095 INF: ======================================
17-02-28 20:21:42.209 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:42.210 -08 000000047 INF: Y Motor: Unshifted Position: 5797043
17-02-28 20:21:42.210 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:42.210 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:42.272 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:42.272 -08 000000047 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:21:42.272 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:42.333 -08 000000047 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:42.333 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:42.333 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:42.395 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:42.395 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:42.395 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:42.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:42.460 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:42.521 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:42.522 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:42.584 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:42.584 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:42.584 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:42.646 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:21:42.646 -08 000000047 INF: ======================================
17-02-28 20:21:42.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:42.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:21:42.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:42.649 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:42.706 -08 000000066 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:42.706 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:42.770 -08 000000046 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:21:42.770 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:42.771 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:42.832 -08 000000090 INF: FPGA: Recv ZADCR 2421
17-02-28 20:21:42.832 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:21:42.832 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:42.834 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:42.895 -08 000000046 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:21:42.895 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:21:42.895 -08 000000042 INF: TDIScan finished after 7541.9645 ms
17-02-28 20:21:42.895 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:21:42.895 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:21:42.896 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:42.957 -08 000000037 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:42.957 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:42.958 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:42.959 -08 000000109 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:42.959 -08 000000101 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:42.959 -08 000000078 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:42.959 -08 000000109 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:42.959 -08 000000109 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:42.959 -08 000000101 INF: ======================================
17-02-28 20:21:42.960 -08 000000078 INF: ======================================
17-02-28 20:21:43.020 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:21:43.020 -08 000000109 INF: ======================================
17-02-28 20:21:43.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:43.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:43.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:43.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:43.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:43.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:43.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:43.084 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:43.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:43.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:43.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:21:43.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:43.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:43.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:21:43.144 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:43.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:43.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:21:43.150 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:21:43.394 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:43.457 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:43.707 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:43.768 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:43.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:21:43.866 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0796040457299298Best Z position at top surface = -0.152872062663185Best Z position at top surface + compensator offset = -0.130172062663185 C:3,L:1,T
17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.152872062663185
17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94244
17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0796040457299298
17-02-28 20:21:43.867 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.58985
17-02-28 20:21:43.867 -08 000000042 INF: Z-height at LaneTopSurface is -0.152872062663185.
17-02-28 20:21:43.867 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:44.005 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:44.005 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:44.018 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:44.079 -08 000000030 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:44.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Focus Point 1===================
17-02-28 20:21:44.080 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:44.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.082 -08 000000038 INF: ===================Move Tilt Motor 1===================
17-02-28 20:21:44.082 -08 000000033 INF: ===================Move Tilt Motor 3===================
17-02-28 20:21:44.083 -08 000000023 INF: ===================Move Tilt Motor 2===================
17-02-28 20:21:44.083 -08 000000033 INF: Tilt Motor 3: Moving to 5.2105 mm, started at 5.2113 mm, delta = -0.0008 mm
17-02-28 20:21:44.083 -08 000000033 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:44.083 -08 000000038 INF: ======================================
17-02-28 20:21:44.083 -08 000000023 INF: ======================================
17-02-28 20:21:44.142 -08 000000099 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:44.142 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:44.142 -08 000000033 INF: Tilt Motor 3: Moving to 20514 encoder counts
17-02-28 20:21:44.142 -08 000000033 INF: FPGA: Xmit T3MOVETO 20514\n
17-02-28 20:21:44.265 -08 000000099 INF: FPGA: Recv T3MOVETO 0
17-02-28 20:21:44.265 -08 000000033 INF: Tilt Motor 3: To move from 5.211 to 5.210 (-0.001 mm) should take 0 steps, but required 0 steps (0.000 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:21:44.265 -08 000000033 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:44.330 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:44.331 -08 000000023 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:44.332 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:44.332 -08 000000033 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:44.391 -08 000000066 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:44.391 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:44.391 -08 000000033 INF: FPGA: Xmit T3RD\n
17-02-28 20:21:44.392 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:44.453 -08 000000046 INF: FPGA: Recv T3RD 20517
17-02-28 20:21:44.453 -08 000000033 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:21:44.453 -08 000000033 INF: Tilt Motor 3: After move to 5.2105, error = 0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:44.453 -08 000000033 INF: Tilt Motor 3: Moved to 5.2113 after 370.2982 ms
17-02-28 20:21:44.453 -08 000000033 INF: ======================================
17-02-28 20:21:44.454 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.456 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.07675395464298, m2=5.2635772251359, m3=5.2104912251359
17-02-28 20:21:44.456 -08 000000042 INF: ETF Best Z: -0.1301721 mm (34123 DAC)
17-02-28 20:21:44.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:44.457 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:21:44.457 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:21:44.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:44.985 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:45.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:45.297 -08 000000039 INF: FPGA: Recv MIOCOMPF
17-02-28 20:21:45.297 -08 000000042 INF: Compensator: Moved IntoPath in 840 ms
17-02-28 20:21:45.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:45.298 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:45.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:45.305 -08 000000042 INF: Swath 1 position calculated to be: {X=68.63164, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:21:45.305 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73964, Y=39.76308} from estimated center X= 69.147, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:21:45.310 -08 000000042 INF: Swath 0: Converted transform from (-90.23992, 4.536524) pixels to (-0.03105, 0.001725) mm.
17-02-28 20:21:45.316 -08 000000042 INF: Swath 1: Converted transform from (-118.6965, 3.599287) pixels to (-0.041055, 0.00138) mm.
17-02-28 20:21:45.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:21:45.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:21:45.317 -08 000000042 INF: Transformed XStagePosition from 68.63164 mm to 68.6005875729024 mm.
17-02-28 20:21:45.329 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5548143554488 mm.
17-02-28 20:21:45.329 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3548143554488 mm.
17-02-28 20:21:45.329 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4455643554488 mm.
17-02-28 20:21:45.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:45.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:45.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:45.331 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-02-28 20:21:45.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:45.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:45.338 -08 000000108 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:45.338 -08 000000023 INF: ===================Move X,Y===================
17-02-28 20:21:45.338 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:45.338 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:45.339 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:21:45.339 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:45.339 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:45.339 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:45.339 -08 000000023 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:45.339 -08 000000058 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:45.339 -08 000000058 INF: Z Motor: Moving to -0.1502 mm, started at -0.0100 mm
17-02-28 20:21:45.339 -08 000000058 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:21:45.339 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:45.339 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:45.339 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:45.340 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:45.340 -08 000000075 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:45.340 -08 000000073 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:45.340 -08 000000046 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:45.340 -08 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:45.340 -08 000000052 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:45.341 -08 000000072 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:45.341 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:45.341 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:45.341 -08 000000073 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:45.341 -08 000000045 INF: ======================================
17-02-28 20:21:45.341 -08 000000105 INF: ======================================
17-02-28 20:21:45.341 -08 000000050 INF: ======================================
17-02-28 20:21:45.341 -08 000000073 INF: ======================================
17-02-28 20:21:45.341 -08 000000075 INF: ======================================
17-02-28 20:21:45.342 -08 000000052 INF: ======================================
17-02-28 20:21:45.342 -08 000000089 INF: ===================Move X Motor without settling===================
17-02-28 20:21:45.342 -08 000000059 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:45.342 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:45.343 -08 000000089 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:45.343 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:45.343 -08 000000059 INF: Y Motor: Moving to 64.5548 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:21:45.343 -08 000000059 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:45.343 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:45.343 -08 000000046 INF: ======================================
17-02-28 20:21:45.344 -08 000000072 INF: ======================================
17-02-28 20:21:45.344 -08 000000038 INF: ======================================
17-02-28 20:21:45.344 -08 000000085 INF: ======================================
17-02-28 20:21:45.345 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:45.345 -08 000000104 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:45.346 -08 000000095 INF: ======================================
17-02-28 20:21:45.346 -08 000000104 INF: ======================================
17-02-28 20:21:45.347 -08 000000108 INF: ======================================
17-02-28 20:21:45.359 -08 000000109 INF: FPGA: Recv ZTRG 
17-02-28 20:21:45.359 -08 000000058 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:21:45.423 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:21:45.423 -08 000000059 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:45.423 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:45.423 -08 000000089 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:45.423 -08 000000089 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:45.423 -08 000000095 INF: FPGA: Recv ZYT 
17-02-28 20:21:45.424 -08 000000058 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:21:45.424 -08 000000058 INF: FPGA: Xmit ZMV 39366\n
17-02-28 20:21:45.483 -08 000000066 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:21:45.483 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:45.485 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Moving to 68.6006 mm @15.000 mm/sec, started at 69.1855 mm
17-02-28 20:21:45.485 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:45.485 -08 000000089 INF: X Motor: Xmit MA 3932\n
17-02-28 20:21:45.547 -08 000000089 INF: X Motor: Recv MA 3932\r\n>
17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:45.547 -08 000000089 INF: X Motor: WaitUntilStopped 60039
17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Set target position to 5955481 encoder counts
17-02-28 20:21:45.547 -08 000000059 INF: Y Motor: Xmit s r0xca 5955481\r
17-02-28 20:21:45.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:45.607 -08 000000033 INF: FPGA: Recv ZMV 
17-02-28 20:21:45.607 -08 000000058 INF: Z Motor: MoveAndTrigger 'ZMV' command took 183.4313 ms
17-02-28 20:21:45.607 -08 000000058 INF: FPGA: Xmit ZDACR\n
17-02-28 20:21:45.608 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:45.609 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:21:45.609 -08 000000059 INF: Y Motor: Start the move command
17-02-28 20:21:45.609 -08 000000059 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:45.669 -08 000000095 INF: FPGA: Recv ZDACR 39366
17-02-28 20:21:45.669 -08 000000058 INF: Z Motor: MoveAndTrigger took 329.8279 ms w/comms
17-02-28 20:21:45.669 -08 000000058 INF: Z Motor: After move to -0.1502, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:21:45.669 -08 000000058 INF: Z Motor: MoveAbsStepped took 330.0127 ms
17-02-28 20:21:45.669 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:45.671 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:21:45.671 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:21:45.671 -08 000000059 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:21:45.671 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:45.672 -08 000000072 INF: ===================Camera Arm TDI===================
17-02-28 20:21:45.672 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:21:45.672 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:45.672 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:45.673 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:45.673 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:45.673 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:45.674 -08 000000066 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:21:45.733 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:21:45.733 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:45.734 -08 000000066 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:21:45.795 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:21:45.795 -08 000000066 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:45.796 -08 000000066 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:45.797 -08 000000059 INF: Y Motor: Unshifted Position: 5880997
17-02-28 20:21:45.797 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:45.798 -08 000000066 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:21:45.798 -08 000000066 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:21:45.798 -08 000000066 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:21:45.847 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:45.857 -08 000000099 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:45.857 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:45.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:45.859 -08 000000066 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:45.859 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:45.861 -08 000000066 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:45.861 -08 000000066 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:45.861 -08 000000066 INF: Z Motor: Arming to move to -0.1102 mm
17-02-28 20:21:45.861 -08 000000066 INF: FPGA: Xmit ZYT 6435481 4\n
17-02-28 20:21:45.921 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:21:45.921 -08 000000066 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6380997 enc / 63.810 mm / ) = 6435481 enc / 64.355 mm
17-02-28 20:21:45.921 -08 000000066 INF: FPGA: Xmit ZARM 28881\n
17-02-28 20:21:45.922 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:45.973 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:45.983 -08 000000095 INF: FPGA: Recv ZARM
17-02-28 20:21:45.983 -08 000000066 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8854 ms
17-02-28 20:21:45.983 -08 000000066 INF: Z Motor: ArmAbsStepped took 122.0185 ms
17-02-28 20:21:45.983 -08 000000066 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:45.984 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:21:45.985 -08 000000089 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:45.986 -08 000000066 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:45.986 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:21:45.988 -08 000000066 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:45.988 -08 000000066 INF: ===================TDI Scan Setup===================
17-02-28 20:21:45.989 -08 000000066 INF: ======================================
17-02-28 20:21:46.047 -08 000000089 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:46.047 -08 000000089 INF: X Motor: Moved to 68.5996 after 500 ms
17-02-28 20:21:46.047 -08 000000089 INF: ======================================
17-02-28 20:21:46.109 -08 000000059 INF: Y Motor: Unshifted Position: 5955483
17-02-28 20:21:46.109 -08 000000059 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:46.109 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:46.171 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:21:46.171 -08 000000059 INF: Y Motor: Moved to 64.5548 after 500 ms
17-02-28 20:21:46.171 -08 000000059 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:46.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:46.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:46.233 -08 000000059 INF: Y Motor: Recv v 4096\r
17-02-28 20:21:46.233 -08 000000059 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:46.233 -08 000000059 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:46.296 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:21:46.296 -08 000000059 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:46.296 -08 000000059 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: Recv v 402653184\r
17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:46.360 -08 000000059 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: Recv v 0\r
17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:46.422 -08 000000059 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:46.483 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:21:46.483 -08 000000059 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:46.483 -08 000000059 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:46.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:46.547 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:46.548 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:21:46.548 -08 000000059 INF: ======================================
17-02-28 20:21:46.549 -08 000000023 INF: ===================Move X,Y===================
17-02-28 20:21:46.550 -08 000000023 INF: ======================================
17-02-28 20:21:46.632 -08 000000072 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:46.632 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:46.632 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:46.648 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:46.650 -08 000000072 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:46.797 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:46.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:47.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:47.169 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:47.419 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:47.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:47.627 -08 000000072 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:47.628 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:47.628 -08 000000072 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:47.643 -08 000000072 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:47.645 -08 000000072 INF: ===================Camera Arm TDI===================
17-02-28 20:21:47.646 -08 000000072 INF: ======================================
17-02-28 20:21:47.647 -08 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:47.648 -08 000000058 INF: ======================================
17-02-28 20:21:47.649 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:47.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:47.650 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:21:47.650 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:21:47.733 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:21:47.733 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:21:47.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:47.793 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:21:47.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:21:47.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:47.793 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:47.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:47.855 -08 000000046 INF: FPGA: Recv TDIYERD 6455482
17-02-28 20:21:47.855 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455482 counts (64.555 mm)
17-02-28 20:21:47.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:47.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:47.856 -08 000000089 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:47.857 -08 000000069 INF: ===================Set YMotor gains for scans===================
17-02-28 20:21:47.857 -08 000000069 INF: ======================================
17-02-28 20:21:47.857 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:47.858 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:21:47.858 -08 000000089 INF: FPGA: Xmit TDIYPOS 6344556\n
17-02-28 20:21:47.919 -08 000000104 INF: FPGA: Recv TDIYPOS
17-02-28 20:21:47.919 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:47.920 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:21:47.921 -08 000000089 INF: FPGA: Xmit TDIYARM3 139264 6435481 1 1\n
17-02-28 20:21:47.981 -08 000000099 INF: FPGA: Recv TDIYARM3
17-02-28 20:21:47.981 -08 000000089 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:21:47.982 -08 000000089 INF: ===================TDI FPGA Arm===================
17-02-28 20:21:47.983 -08 000000089 INF: ======================================
17-02-28 20:21:47.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:21:47.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:47.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:47.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:47.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:47.987 -08 000000051 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:21:47.987 -08 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:21:47.987 -08 000000051 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:21:47.987 -08 000000051 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:21:47.987 -08 000000051 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:21:47.987 -08 000000086 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:21:47.987 -08 000000051 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:21:47.987 -08 000000086 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:21:47.987 -08 000000086 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:21:47.988 -08 000000086 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:21:48.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:48.107 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:48.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:48.418 -08 000000038 INF: FPGA: Recv EX2MV
17-02-28 20:21:48.418 -08 000000038 INF: FPGA: Recv EX1MV
17-02-28 20:21:48.418 -08 000000086 INF: Excitation Filter 1: Moved -107 steps in 430.8054 ms
17-02-28 20:21:48.418 -08 000000051 INF: Excitation Filter 2: Moved -107 steps in 430.9658 ms
17-02-28 20:21:48.418 -08 000000051 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 431.0631 ms
17-02-28 20:21:48.418 -08 000000051 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.1301 ms
17-02-28 20:21:48.418 -08 000000086 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.937 ms
17-02-28 20:21:48.418 -08 000000086 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.1102 ms
17-02-28 20:21:48.418 -08 000000051 INF: ======================================
17-02-28 20:21:48.418 -08 000000086 INF: ======================================
17-02-28 20:21:48.419 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:48.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:48.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:48.421 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:21:48.421 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:48.421 -08 000000066 INF: ===================FPGA Z Wait===================
17-02-28 20:21:48.421 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:48.421 -08 000000066 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:21:48.422 -08 000000030 INF: Y Motor: Moving to 14.9065 mm @6.500 mm/sec, started at 64.5548 mm
17-02-28 20:21:48.422 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:48.422 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:48.422 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:21:48.422 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:21:48.423 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:21:48.423 -08 000000072 INF: ===================Camera TDI===================
17-02-28 20:21:48.423 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:21:48.424 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:48.424 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:48.425 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:48.425 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:48.482 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:48.482 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:48.482 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:48.545 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:48.545 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:48.574 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:48.574 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:48.575 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:48.575 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Set target position to 990648 encoder counts
17-02-28 20:21:48.607 -08 000000030 INF: Y Motor: Xmit s r0xca 990648\r
17-02-28 20:21:48.669 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:48.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:48.669 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:21:48.669 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:48.724 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:48.724 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:48.725 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:21:48.725 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:21:48.732 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:48.732 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:48.732 -08 000000030 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:21:48.732 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:48.793 -08 000000069 INF: FPGA: Recv ZWAIT 
17-02-28 20:21:48.794 -08 000000066 INF: ======================================
17-02-28 20:21:48.855 -08 000000030 INF: Y Motor: Unshifted Position: 5893193
17-02-28 20:21:48.874 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:48.874 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:48.874 -08 000000045 INF: ===================Camera #2 Frame #5===================
17-02-28 20:21:48.875 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:21:48.875 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:21:48.875 -08 000000072 INF: ===================Camera #0 Frame #5===================
17-02-28 20:21:48.905 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:48.982 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:49.031 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:49.041 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:49.041 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:49.041 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:21:49.041 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:21:49.041 -08 000000045 INF: ===================Camera #2 Frame #11===================
17-02-28 20:21:49.041 -08 000000072 INF: ===================Camera #0 Frame #11===================
17-02-28 20:21:49.042 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:49.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:49.042 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:49.043 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:21:49.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 5 of 5 seconds left===================
17-02-28 20:21:49.167 -08 000000030 INF: Y Motor: Unshifted Position: 5690397
17-02-28 20:21:49.211 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:49.211 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:49.211 -08 000000072 INF: ===================Camera #0 Frame #17===================
17-02-28 20:21:49.212 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:21:49.212 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:21:49.212 -08 000000045 INF: ===================Camera #2 Frame #17===================
17-02-28 20:21:49.217 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:49.341 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:49.381 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:49.381 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:49.381 -08 000000072 INF: ===================Camera #0 Frame #23===================
17-02-28 20:21:49.383 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:21:49.383 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:21:49.383 -08 000000045 INF: ===================Camera #2 Frame #23===================
17-02-28 20:21:49.480 -08 000000030 INF: Y Motor: Unshifted Position: 5487386
17-02-28 20:21:49.530 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:49.551 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:21:49.551 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:21:49.551 -08 000000072 INF: ===================Camera #0 Frame #29===================
17-02-28 20:21:49.554 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:21:49.554 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:21:49.554 -08 000000045 INF: ===================Camera #2 Frame #30===================
17-02-28 20:21:49.654 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:49.721 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:21:49.721 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:21:49.721 -08 000000072 INF: ===================Camera #0 Frame #36===================
17-02-28 20:21:49.728 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:21:49.728 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:21:49.728 -08 000000045 INF: ===================Camera #2 Frame #36===================
17-02-28 20:21:49.793 -08 000000030 INF: Y Motor: Unshifted Position: 5285880
17-02-28 20:21:49.843 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:49.894 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:21:49.894 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:21:49.894 -08 000000072 INF: ===================Camera #0 Frame #42===================
17-02-28 20:21:49.898 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:21:49.898 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:21:49.898 -08 000000045 INF: ===================Camera #2 Frame #42===================
17-02-28 20:21:49.967 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:50.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 4 of 5 seconds left===================
17-02-28 20:21:50.064 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:21:50.064 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:21:50.064 -08 000000072 INF: ===================Camera #0 Frame #48===================
17-02-28 20:21:50.069 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:21:50.069 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:21:50.069 -08 000000045 INF: ===================Camera #2 Frame #49===================
17-02-28 20:21:50.103 -08 000000030 INF: Y Motor: Unshifted Position: 5082210
17-02-28 20:21:50.153 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.234 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:21:50.234 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:21:50.234 -08 000000072 INF: ===================Camera #0 Frame #55===================
17-02-28 20:21:50.243 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:21:50.243 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:21:50.243 -08 000000045 INF: ===================Camera #2 Frame #55===================
17-02-28 20:21:50.278 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.405 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:21:50.405 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:21:50.405 -08 000000072 INF: ===================Camera #0 Frame #61===================
17-02-28 20:21:50.412 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:21:50.412 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:21:50.412 -08 000000045 INF: ===================Camera #2 Frame #61===================
17-02-28 20:21:50.414 -08 000000030 INF: Y Motor: Unshifted Position: 4879842
17-02-28 20:21:50.464 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.573 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:21:50.573 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:21:50.573 -08 000000072 INF: ===================Camera #0 Frame #67===================
17-02-28 20:21:50.582 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:21:50.582 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:21:50.582 -08 000000045 INF: ===================Camera #2 Frame #67===================
17-02-28 20:21:50.591 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.727 -08 000000030 INF: Y Motor: Unshifted Position: 4676396
17-02-28 20:21:50.741 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:21:50.741 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:21:50.741 -08 000000072 INF: ===================Camera #0 Frame #73===================
17-02-28 20:21:50.752 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:21:50.752 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:21:50.752 -08 000000045 INF: ===================Camera #2 Frame #74===================
17-02-28 20:21:50.777 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.901 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:50.909 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:21:50.909 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:21:50.909 -08 000000072 INF: ===================Camera #0 Frame #79===================
17-02-28 20:21:50.926 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:21:50.926 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:21:50.926 -08 000000045 INF: ===================Camera #2 Frame #80===================
17-02-28 20:21:51.040 -08 000000030 INF: Y Motor: Unshifted Position: 4472718
17-02-28 20:21:51.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:51.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 3 of 5 seconds left===================
17-02-28 20:21:51.077 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:21:51.077 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:21:51.077 -08 000000072 INF: ===================Camera #0 Frame #86===================
17-02-28 20:21:51.090 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:51.097 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:21:51.097 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:21:51.097 -08 000000045 INF: ===================Camera #2 Frame #86===================
17-02-28 20:21:51.214 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:51.249 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:21:51.249 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:21:51.249 -08 000000072 INF: ===================Camera #0 Frame #92===================
17-02-28 20:21:51.267 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:21:51.267 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:21:51.267 -08 000000045 INF: ===================Camera #2 Frame #93===================
17-02-28 20:21:51.352 -08 000000030 INF: Y Motor: Unshifted Position: 4269919
17-02-28 20:21:51.402 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:51.418 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:21:51.418 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:21:51.418 -08 000000072 INF: ===================Camera #0 Frame #98===================
17-02-28 20:21:51.441 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:21:51.441 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:21:51.441 -08 000000045 INF: ===================Camera #2 Frame #99===================
17-02-28 20:21:51.526 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:51.588 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:21:51.588 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:21:51.588 -08 000000072 INF: ===================Camera #0 Frame #104===================
17-02-28 20:21:51.613 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:21:51.613 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:21:51.613 -08 000000045 INF: ===================Camera #2 Frame #105===================
17-02-28 20:21:51.662 -08 000000030 INF: Y Motor: Unshifted Position: 4068414
17-02-28 20:21:51.712 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:51.758 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:21:51.758 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:21:51.758 -08 000000072 INF: ===================Camera #0 Frame #111===================
17-02-28 20:21:51.784 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:21:51.784 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:21:51.784 -08 000000045 INF: ===================Camera #2 Frame #112===================
17-02-28 20:21:51.839 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:51.931 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:21:51.931 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:21:51.931 -08 000000072 INF: ===================Camera #0 Frame #117===================
17-02-28 20:21:51.958 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:21:51.958 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:21:51.958 -08 000000045 INF: ===================Camera #2 Frame #118===================
17-02-28 20:21:51.976 -08 000000030 INF: Y Motor: Unshifted Position: 3864099
17-02-28 20:21:52.026 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:52.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 2 of 5 seconds left===================
17-02-28 20:21:52.101 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:21:52.101 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:21:52.101 -08 000000072 INF: ===================Camera #0 Frame #123===================
17-02-28 20:21:52.128 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:21:52.128 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:21:52.128 -08 000000045 INF: ===================Camera #2 Frame #124===================
17-02-28 20:21:52.150 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.270 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:21:52.270 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:21:52.270 -08 000000072 INF: ===================Camera #0 Frame #130===================
17-02-28 20:21:52.288 -08 000000030 INF: Y Motor: Unshifted Position: 3661080
17-02-28 20:21:52.299 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:21:52.299 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:21:52.299 -08 000000045 INF: ===================Camera #2 Frame #131===================
17-02-28 20:21:52.338 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.442 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:21:52.442 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:21:52.442 -08 000000072 INF: ===================Camera #0 Frame #136===================
17-02-28 20:21:52.462 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.473 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:21:52.473 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:21:52.473 -08 000000045 INF: ===================Camera #2 Frame #137===================
17-02-28 20:21:52.598 -08 000000030 INF: Y Motor: Unshifted Position: 3459367
17-02-28 20:21:52.612 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:21:52.612 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:21:52.612 -08 000000072 INF: ===================Camera #0 Frame #142===================
17-02-28 20:21:52.644 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:21:52.644 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:21:52.644 -08 000000045 INF: ===================Camera #2 Frame #143===================
17-02-28 20:21:52.648 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.773 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.781 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:21:52.781 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:21:52.781 -08 000000072 INF: ===================Camera #0 Frame #148===================
17-02-28 20:21:52.815 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:21:52.815 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:21:52.815 -08 000000045 INF: ===================Camera #2 Frame #150===================
17-02-28 20:21:52.912 -08 000000030 INF: Y Motor: Unshifted Position: 3255267
17-02-28 20:21:52.951 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:21:52.951 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:21:52.951 -08 000000072 INF: ===================Camera #0 Frame #155===================
17-02-28 20:21:52.962 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:52.989 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:21:52.989 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:21:52.989 -08 000000045 INF: ===================Camera #2 Frame #156===================
17-02-28 20:21:53.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:53.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Delay 1 of 5 seconds left===================
17-02-28 20:21:53.086 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:53.124 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:21:53.124 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:21:53.124 -08 000000072 INF: ===================Camera #0 Frame #161===================
17-02-28 20:21:53.160 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:21:53.160 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:21:53.160 -08 000000045 INF: ===================Camera #2 Frame #162===================
17-02-28 20:21:53.223 -08 000000030 INF: Y Motor: Unshifted Position: 3053555
17-02-28 20:21:53.273 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:53.294 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:21:53.294 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:21:53.294 -08 000000072 INF: ===================Camera #0 Frame #167===================
17-02-28 20:21:53.331 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:21:53.331 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:21:53.331 -08 000000045 INF: ===================Camera #2 Frame #169===================
17-02-28 20:21:53.397 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:53.464 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:21:53.464 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:21:53.464 -08 000000072 INF: ===================Camera #0 Frame #174===================
17-02-28 20:21:53.505 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:21:53.505 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:21:53.505 -08 000000045 INF: ===================Camera #2 Frame #175===================
17-02-28 20:21:53.536 -08 000000030 INF: Y Motor: Unshifted Position: 2849460
17-02-28 20:21:53.586 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:53.637 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:21:53.637 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:21:53.637 -08 000000072 INF: ===================Camera #0 Frame #180===================
17-02-28 20:21:53.676 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:21:53.676 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:21:53.676 -08 000000045 INF: ===================Camera #2 Frame #181===================
17-02-28 20:21:53.711 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:53.807 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:21:53.807 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:21:53.807 -08 000000072 INF: ===================Camera #0 Frame #186===================
17-02-28 20:21:53.846 -08 000000030 INF: Y Motor: Unshifted Position: 2647962
17-02-28 20:21:53.847 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:21:53.847 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:21:53.847 -08 000000045 INF: ===================Camera #2 Frame #188===================
17-02-28 20:21:53.896 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:53.977 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:21:53.977 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:21:53.977 -08 000000072 INF: ===================Camera #0 Frame #192===================
17-02-28 20:21:54.021 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:54.021 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:21:54.021 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:21:54.021 -08 000000045 INF: ===================Camera #2 Frame #194===================
17-02-28 20:21:54.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:54.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:54.043 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:21:54.043 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:54.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:21:54.147 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:21:54.147 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:21:54.147 -08 000000072 INF: ===================Camera #0 Frame #199===================
17-02-28 20:21:54.160 -08 000000030 INF: Y Motor: Unshifted Position: 2443646
17-02-28 20:21:54.192 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:21:54.192 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:21:54.192 -08 000000045 INF: ===================Camera #2 Frame #200===================
17-02-28 20:21:54.210 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:54.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:21:54.221 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:21:54.319 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:21:54.319 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:21:54.319 -08 000000072 INF: ===================Camera #0 Frame #205===================
17-02-28 20:21:54.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:21:54.335 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:54.363 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:21:54.363 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:21:54.363 -08 000000045 INF: ===================Camera #2 Frame #207===================
17-02-28 20:21:54.408 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF)
17-02-28 20:21:54.408 -08 000000018 INF: Current Position of Pump is: 18240
17-02-28 20:21:54.408 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Dispensing port PortC===================
17-02-28 20:21:54.471 -08 000000030 INF: Y Motor: Unshifted Position: 2240849
17-02-28 20:21:54.489 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:21:54.489 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:21:54.489 -08 000000072 INF: ===================Camera #0 Frame #211===================
17-02-28 20:21:54.508 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD18240R\r
17-02-28 20:21:54.521 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:54.537 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:21:54.537 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:21:54.537 -08 000000045 INF: ===================Camera #2 Frame #213===================
17-02-28 20:21:54.594 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:54.645 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:54.659 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:21:54.659 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:21:54.659 -08 000000072 INF: ===================Camera #0 Frame #218===================
17-02-28 20:21:54.694 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:54.707 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:21:54.707 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:21:54.707 -08 000000045 INF: ===================Camera #2 Frame #219===================
17-02-28 20:21:54.783 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:54.784 -08 000000030 INF: Y Motor: Unshifted Position: 2038049
17-02-28 20:21:54.832 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:21:54.832 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:21:54.832 -08 000000072 INF: ===================Camera #0 Frame #224===================
17-02-28 20:21:54.834 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:54.878 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:21:54.878 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:21:54.878 -08 000000045 INF: ===================Camera #2 Frame #226===================
17-02-28 20:21:54.958 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.002 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:21:55.002 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:21:55.002 -08 000000072 INF: ===================Camera #0 Frame #230===================
17-02-28 20:21:55.033 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:55.052 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:21:55.052 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:21:55.052 -08 000000045 INF: ===================Camera #2 Frame #232===================
17-02-28 20:21:55.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:55.094 -08 000000030 INF: Y Motor: Unshifted Position: 1836334
17-02-28 20:21:55.144 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.172 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:21:55.172 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:21:55.172 -08 000000072 INF: ===================Camera #0 Frame #236===================
17-02-28 20:21:55.222 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:21:55.222 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:21:55.222 -08 000000045 INF: ===================Camera #2 Frame #238===================
17-02-28 20:21:55.269 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.340 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:21:55.340 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:21:55.340 -08 000000072 INF: ===================Camera #0 Frame #243===================
17-02-28 20:21:55.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:55.393 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:21:55.393 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:21:55.393 -08 000000045 INF: ===================Camera #2 Frame #245===================
17-02-28 20:21:55.407 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:55.408 -08 000000030 INF: Y Motor: Unshifted Position: 1632008
17-02-28 20:21:55.458 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.513 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:21:55.513 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:21:55.513 -08 000000072 INF: ===================Camera #0 Frame #249===================
17-02-28 20:21:55.567 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:21:55.567 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:21:55.567 -08 000000045 INF: ===================Camera #2 Frame #251===================
17-02-28 20:21:55.582 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:55.682 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:21:55.682 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:21:55.682 -08 000000072 INF: ===================Camera #0 Frame #255===================
17-02-28 20:21:55.717 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:55.718 -08 000000030 INF: Y Motor: Unshifted Position: 1430509
17-02-28 20:21:55.738 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:21:55.738 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:21:55.738 -08 000000045 INF: ===================Camera #2 Frame #257===================
17-02-28 20:21:55.768 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.852 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:21:55.852 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:21:55.852 -08 000000072 INF: ===================Camera #0 Frame #261===================
17-02-28 20:21:55.893 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:55.909 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:21:55.909 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:21:55.909 -08 000000045 INF: ===================Camera #2 Frame #264===================
17-02-28 20:21:55.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:56.022 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:21:56.022 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:21:56.022 -08 000000072 INF: ===================Camera #0 Frame #268===================
17-02-28 20:21:56.031 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:56.032 -08 000000030 INF: Y Motor: Unshifted Position: 1226179
17-02-28 20:21:56.082 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:56.083 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:21:56.083 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:21:56.083 -08 000000045 INF: ===================Camera #2 Frame #270===================
17-02-28 20:21:56.154 -08 000000105 INF: FPGA: Recv TDIYWAIT
17-02-28 20:21:56.154 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:56.156 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:21:56.157 -08 000000038 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:21:56.157 -08 000000066 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:21:56.157 -08 000000038 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:21:56.157 -08 000000038 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:21:56.157 -08 000000038 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:21:56.157 -08 000000066 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:21:56.157 -08 000000066 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:21:56.157 -08 000000066 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:21:56.157 -08 000000038 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:21:56.158 -08 000000066 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:21:56.194 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:56.194 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:56.194 -08 000000072 INF: ===================Camera #0 Frame #272===================
17-02-28 20:21:56.206 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:56.206 -08 000000072 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:56.207 -08 000000072 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:56.282 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:56.342 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:56.343 -08 000000030 INF: Y Motor: Unshifted Position: 1024684
17-02-28 20:21:56.370 -08 000000072 INF: Camera #0 ReleaseBuffer
17-02-28 20:21:56.370 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:21:56.370 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:21:56.370 -08 000000045 INF: ===================Camera #2 Frame #272===================
17-02-28 20:21:56.370 -08 000000072 INF: ===================Camera TDI===================
17-02-28 20:21:56.377 -08 000000045 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:21:56.378 -08 000000045 INF: ===================CameraTDI Cleanup===================
17-02-28 20:21:56.393 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:56.407 -08 000000072 INF: ======================================
17-02-28 20:21:56.528 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:21:56.528 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:21:56.528 -08 000000066 INF: Excitation Filter 2: Moved 107 steps in 370.0237 ms
17-02-28 20:21:56.528 -08 000000066 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.1226 ms
17-02-28 20:21:56.528 -08 000000066 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.1963 ms
17-02-28 20:21:56.528 -08 000000038 INF: Excitation Filter 1: Moved 107 steps in 370.1932 ms
17-02-28 20:21:56.528 -08 000000038 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4027 ms
17-02-28 20:21:56.528 -08 000000038 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.4742 ms
17-02-28 20:21:56.528 -08 000000066 INF: ======================================
17-02-28 20:21:56.529 -08 000000038 INF: ======================================
17-02-28 20:21:56.530 -08 000000030 INF: Y Motor: Unshifted Position: 990649
17-02-28 20:21:56.530 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:21:56.530 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:56.530 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:21:56.531 -08 000000085 INF: ======================================
17-02-28 20:21:56.578 -08 000000045 INF: Camera #2 ReleaseBuffer
17-02-28 20:21:56.578 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:21:56.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:56.595 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:21:56.595 -08 000000030 INF: Y Motor: Moved to 14.9065 after 7862 ms
17-02-28 20:21:56.595 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:21:56.613 -08 000000045 INF: ======================================
17-02-28 20:21:56.615 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:21:56.616 -08 000000047 INF: ======================================
17-02-28 20:21:56.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:56.657 -08 000000030 INF: Y Motor: Recv v 4097\r
17-02-28 20:21:56.657 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:21:56.657 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:56.672 -08 000000108 INF: RunCopyService queue size at 2/28/2017 8:21:56 PM is 2
17-02-28 20:21:56.718 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:21:56.718 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:56.718 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: Recv v 134217728\r
17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:21:56.780 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:21:56.842 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:56.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:56.907 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:56.907 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:21:56.907 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:56.968 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:56.969 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:21:56.969 -08 000000030 INF: ======================================
17-02-28 20:21:56.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:56.971 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:21:56.972 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:56.972 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:21:57.029 -08 000000090 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:21:57.029 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:21:57.091 -08 000000073 INF: FPGA: Recv TDIYERD 1490649
17-02-28 20:21:57.091 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:21:57.153 -08 000000035 INF: FPGA: Recv ZADCR 31486
17-02-28 20:21:57.153 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.121. Y moved -48.539 mm
17-02-28 20:21:57.153 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:21:57.215 -08 000000086 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:21:57.215 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:21:57.215 -08 000000042 INF: TDIScan finished after 11896.3929 ms
17-02-28 20:21:57.215 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:21:57.215 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:21:57.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.218 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:57.250 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.992 um
17-02-28 20:21:57.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.251 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:21:57.278 -08 000000036 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:21:57.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.279 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:57.279 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:57.279 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:21:57.279 -08 000000010 INF: ===================Dither Clean Up Command===================
17-02-28 20:21:57.279 -08 000000109 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:21:57.279 -08 000000082 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:21:57.279 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:21:57.280 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:21:57.280 -08 000000109 INF: ======================================
17-02-28 20:21:57.280 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:21:57.280 -08 000000082 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:21:57.280 -08 000000082 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:21:57.280 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:57.280 -08 000000077 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:57.281 -08 000000051 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:21:57.283 -08 000000077 INF: ===================LFT:Extracting coords===================
17-02-28 20:21:57.309 -08 000000077 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:57.309 -08 000000077 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:21:57.310 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.310 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.310 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.311 -08 000000075 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:57.311 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:57.311 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.311 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:57.311 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:21:57.342 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:21:57.342 -08 000000082 INF: ======================================
17-02-28 20:21:57.342 -08 000000037 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:57.342 -08 000000037 INF: FPGA: Recv ZSEL 
17-02-28 20:21:57.343 -08 000000051 INF: FPGA: Xmit ZDACW 39366\n
17-02-28 20:21:57.343 -08 000000086 INF: ======================================
17-02-28 20:21:57.385 -08 000000052 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:57.385 -08 000000075 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:57.385 -08 000000039 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:57.391 -08 000000078 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:21:57.402 -08 000000105 INF: FPGA: Recv ZDACW 
17-02-28 20:21:57.403 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:21:57.403 -08 000000051 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:21:57.464 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:21:57.464 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:21:57.465 -08 000000051 INF: ======================================
17-02-28 20:21:57.536 -08 000000052 INF: LFT found best fwhm score 2.000015 in 151 ms
17-02-28 20:21:57.536 -08 000000052 INF: LFT found good score at index 8937 with fwhm value 2.000015. Next cycle, cycle 4 starting Z position for top surface is at -0.150 mm FC:B, C:3,L:1,T
17-02-28 20:21:57.536 -08 000000075 INF: LFT found best fwhm score 2.000154 in 151 ms
17-02-28 20:21:57.536 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.537 -08 000000075 INF: LFT found good score at index 5613 with fwhm value 2.000154. Next cycle, cycle 4 starting Z position for top surface is at -0.150 mm FC:B, C:3,L:1,T
17-02-28 20:21:57.537 -08 000000039 INF: LFT found best fwhm score 2.143586 in 152 ms
17-02-28 20:21:57.537 -08 000000039 INF: LFT found good score at index 2313 with fwhm value 2.143586. Next cycle, cycle 4 starting Z position for top surface is at -0.151 mm FC:B, C:3,L:1,T
17-02-28 20:21:57.537 -08 000000052 INF: ======================================
17-02-28 20:21:57.537 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.537 -08 000000075 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.537 -08 000000039 INF: ======================================
17-02-28 20:21:57.537 -08 000000075 INF: ======================================
17-02-28 20:21:57.555 -08 000000078 INF: LFT found best fwhm score 2.000296 in 164 ms
17-02-28 20:21:57.555 -08 000000078 INF: LFT found good score at index 7909 with fwhm value 2.000296. Next cycle, cycle 4 starting Z position for top surface is at -0.150 mm FC:B, C:3,L:1,T
17-02-28 20:21:57.555 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:21:57.555 -08 000000078 INF: ======================================
17-02-28 20:21:57.557 -08 000000077 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:21:57.557 -08 000000077 INF: LFT weighted average best Z for top surface is at -0.150mm FC:B, C:3,L:1,T
17-02-28 20:21:57.558 -08 000000077 INF: ======================================
17-02-28 20:21:57.559 -08 000000010 INF: ======================================
17-02-28 20:21:57.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:21:57.561 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:21:57.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5), Waiting for image analysis===================
17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HB2 (5)===================
17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:21:57.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 1 - X = 68.63164 Y = 39.76308===================
17-02-28 20:21:57.586 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:21:57.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:21:57.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:21:57.587 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:57.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:21:57.587 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:21:57.587 -08 000000042 INF: Transformed XStagePosition from 69.73964 mm to 69.6985842809081 mm.
17-02-28 20:21:57.599 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5544693554994 mm.
17-02-28 20:21:57.599 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3544693554994 mm.
17-02-28 20:21:57.599 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4452193554994 mm.
17-02-28 20:21:57.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:21:57.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:21:57.602 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -150.2 um, section = A_1
17-02-28 20:21:57.653 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":1,"Tile":1106,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF267","HCSMMF206","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:57.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:21:57.738 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:21:57.738 -08 000000073 INF: ===================MoveEmissionFilters===================
17-02-28 20:21:57.738 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:21:57.741 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:57.741 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:21:57.742 -08 000000052 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:21:57.742 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:57.743 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:57.743 -08 000000058 INF: ===================Move X Motor without settling===================
17-02-28 20:21:57.743 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:21:57.743 -08 000000058 INF: X Motor: Xmit PR VM\n
17-02-28 20:21:57.744 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:57.749 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:57.750 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:57.751 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":1,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF178","HCSMMF183","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.752 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:21:57.752 -08 000000051 INF: Y Motor: Moving to 64.5545 mm @25.000 mm/sec, started at 14.9065 mm
17-02-28 20:21:57.752 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:21:57.752 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:21:57.756 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:21:57.756 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:57.756 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":1,"Tile":1102,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF278","HCSMMF184","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.757 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:57.757 -08 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:21:57.757 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:57.757 -08 000000075 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:21:57.758 -08 000000087 INF: ======================================
17-02-28 20:21:57.761 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:57.762 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:21:57.766 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":1,"Tile":1104,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF189","HCSMMF272","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.767 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:21:57.767 -08 000000045 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:21:57.768 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:57.768 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":1,"Tile":1107,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF234","HCSMMF185","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.768 -08 000000045 INF: ======================================
17-02-28 20:21:57.768 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:57.768 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:21:57.769 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:21:57.769 -08 000000105 INF: ======================================
17-02-28 20:21:57.770 -08 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:21:57.770 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:57.771 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":1,"Tile":1110,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF268","HCSMMF204","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.771 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:21:57.771 -08 000000090 INF: ======================================
17-02-28 20:21:57.772 -08 000000066 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:21:57.772 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:21:57.772 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":1,"Tile":1105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF222","HCSMMF254","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.772 -08 000000066 INF: ======================================
17-02-28 20:21:57.773 -08 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:21:57.773 -08 000000045 INF: ======================================
17-02-28 20:21:57.773 -08 000000099 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:21:57.773 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":1,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF242","HCSMMF223","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.773 -08 000000090 INF: ======================================
17-02-28 20:21:57.774 -08 000000099 INF: ======================================
17-02-28 20:21:57.774 -08 000000047 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:21:57.774 -08 000000039 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:21:57.774 -08 000000047 INF: ======================================
17-02-28 20:21:57.774 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":1,"Tile":1103,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF213","HCSMMF241","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.775 -08 000000105 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:21:57.775 -08 000000039 INF: ======================================
17-02-28 20:21:57.776 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:21:57.777 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:21:57.777 -08 000000087 INF: ======================================
17-02-28 20:21:57.778 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:57.778 -08 000000075 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:21:57.778 -08 000000105 INF: ======================================
17-02-28 20:21:57.779 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:21:57.779 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:21:57.779 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:21:57.779 -08 000000058 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:21:57.779 -08 000000058 INF: X Motor: Xmit PR VI\n
17-02-28 20:21:57.781 -08 000000073 INF: ======================================
17-02-28 20:21:57.781 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":1,"Tile":1113,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF227","HCSMMF195","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.787 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":1,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF269","HCSMMF216","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.788 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":1,"Tile":1111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF277","HCSMMF215","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.789 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":1,"Tile":1116,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF224","HCSMMF245","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.790 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":1,"Tile":1117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF265","HCSMMF285","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.791 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":1,"Tile":1112,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF250","HCSMMF201","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.792 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":1,"Tile":1109,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF198","HCSMMF221","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.793 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":1,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF176","HCSMMF263","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.794 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":1,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF243","HCSMMF218","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.795 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":1,"Tile":1118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF203","HCSMMF190","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.796 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":1,"Tile":1122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF187","HCSMMF257","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.797 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":1,"Tile":1119,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF182","HCSMMF230","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.798 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":1,"Tile":1123,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF229","HCSMMF217","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.799 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":1,"Tile":1124,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF238","HCSMMF253","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.800 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":1,"Tile":1121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF262","HCSMMF220","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.800 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":1,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF232","HCSMMF264","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.801 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":1,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF219","HCSMMF180","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.802 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":1,"Tile":1125,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF237","HCSMMF252","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.809 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":1,"Tile":1126,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF271","HCSMMF236","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:21:57.828 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:57.839 -08 000000030 INF: FPGA: Recv TDIBB
17-02-28 20:21:57.839 -08 000000075 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:21:57.840 -08 000000075 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:21:57.841 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:21:57.841 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Moving to 69.6986 mm @15.000 mm/sec, started at 68.5996 mm
17-02-28 20:21:57.841 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:57.841 -08 000000058 INF: X Motor: Xmit MA 4382\n
17-02-28 20:21:57.842 -08 000000075 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:21:57.842 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:21:57.843 -08 000000075 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:21:57.843 -08 000000075 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:21:57.901 -08 000000059 INF: FPGA: Recv ZSTEP 
17-02-28 20:21:57.901 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Set target position to 5955447 encoder counts
17-02-28 20:21:57.903 -08 000000051 INF: Y Motor: Xmit s r0xca 5955447\r
17-02-28 20:21:57.903 -08 000000075 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:21:57.903 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:57.904 -08 000000058 INF: X Motor: Recv MA 4382\r\n>
17-02-28 20:21:57.904 -08 000000058 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:21:57.905 -08 000000075 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:21:57.905 -08 000000075 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:21:57.905 -08 000000075 INF: Z Motor: Arming to move to -0.1102 mm
17-02-28 20:21:57.905 -08 000000075 INF: FPGA: Xmit ZYT 6435447 4\n
17-02-28 20:21:57.942 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:57.942 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:21:57.967 -08 000000036 INF: FPGA: Recv ZYT 
17-02-28 20:21:57.967 -08 000000075 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490649 enc / 14.906 mm / ) = 6435447 enc / 64.354 mm
17-02-28 20:21:57.967 -08 000000075 INF: FPGA: Xmit ZARM 28881\n
17-02-28 20:21:57.969 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:21:57.969 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:21:57.969 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:21:57.978 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:57.984 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:21:58.026 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:21:58.026 -08 000000075 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.8729 ms
17-02-28 20:21:58.026 -08 000000075 INF: Z Motor: ArmAbsStepped took 120.5754 ms
17-02-28 20:21:58.026 -08 000000075 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:21:58.028 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:21:58.029 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:21:58.029 -08 000000051 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:21:58.029 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.029 -08 000000075 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:21:58.029 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:21:58.031 -08 000000075 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:21:58.031 -08 000000075 INF: ===================TDI Scan Setup===================
17-02-28 20:21:58.032 -08 000000075 INF: ======================================
17-02-28 20:21:58.086 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:58.092 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:21:58.155 -08 000000051 INF: Y Motor: Unshifted Position: 1067931
17-02-28 20:21:58.179 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:58.185 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:21:58.205 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.278 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:21:58.329 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.363 -08 000000082 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:58.363 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:58.363 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:58.378 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:58.379 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:21:58.380 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:21:58.466 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:58.466 -08 000000051 INF: Y Motor: Unshifted Position: 1774810
17-02-28 20:21:58.516 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.528 -08 000000058 INF: X Motor: Xmit PR ER\n
17-02-28 20:21:58.562 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:21:58.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:58.590 -08 000000058 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:21:58.590 -08 000000058 INF: X Motor: Moved to 69.6982 after 685 ms
17-02-28 20:21:58.590 -08 000000058 INF: ======================================
17-02-28 20:21:58.640 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:21:58.779 -08 000000051 INF: Y Motor: Unshifted Position: 2550668
17-02-28 20:21:58.829 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:58.953 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:58.964 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:58.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:58.964 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:21:58.982 -08 000000082 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:21:58.982 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:21:58.982 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:21:58.998 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:21:59.000 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:21:59.002 -08 000000082 INF: ======================================
17-02-28 20:21:59.004 -08 000000052 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:21:59.005 -08 000000052 INF: ======================================
17-02-28 20:21:59.089 -08 000000051 INF: Y Motor: Unshifted Position: 3333111
17-02-28 20:21:59.139 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:59.263 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:59.337 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:59.337 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:59.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:59.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:21:59.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:21:59.339 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°, FC temperature to 55°===================
17-02-28 20:21:59.403 -08 000000051 INF: Y Motor: Unshifted Position: 4118184
17-02-28 20:21:59.453 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:59.577 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:59.712 -08 000000051 INF: Y Motor: Unshifted Position: 4893948
17-02-28 20:21:59.762 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:59.834 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:21:59.834 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:21:59.835 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:21:59.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Flowcell Temp 55°===================
17-02-28 20:21:59.836 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:59.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:59.837 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:21:59.837 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:21:59.887 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:21:59.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:21:59.901 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Selecting Reagent HCM (7)===================
17-02-28 20:21:59.901 -08 000000018 INF: Valve A1: Go to position 7
17-02-28 20:21:59.901 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 5\r
17-02-28 20:21:59.964 -08 000000018 INF: Valve A1: 25.676 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:21:59.964 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 5 to 7
17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW7\r
17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:21:59.964 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:22:00.026 -08 000000051 INF: Y Motor: Unshifted Position: 5675396
17-02-28 20:22:00.076 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:00.202 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:00.338 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:22:00.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:00.338 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Opening shutoff valve===================
17-02-28 20:22:00.340 -08 000000051 INF: Y Motor: Unshifted Position: 5955449
17-02-28 20:22:00.340 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:00.340 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:00.403 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:22:00.403 -08 000000051 INF: Y Motor: Moved to 64.5545 after 2374 ms
17-02-28 20:22:00.403 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:00.463 -08 000000051 INF: Y Motor: Recv v 4096\r
17-02-28 20:22:00.463 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:00.463 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:00.527 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:22:00.527 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:00.527 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: Recv v 402653184\r
17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:00.587 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:00.649 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:00.712 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:22:00.712 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:00.712 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:00.773 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:22:00.773 -08 000000051 INF: ======================================
17-02-28 20:22:00.774 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:22:00.775 -08 000000035 INF: ======================================
17-02-28 20:22:00.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:00.777 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:00.778 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:22:00.778 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:22:00.838 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:00.838 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:22:00.898 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:22:00.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:22:00.898 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:00.899 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:00.958 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:00.959 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:00.960 -08 000000072 INF: FPGA: Recv TDIYERD 6455449
17-02-28 20:22:00.960 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455449 counts (64.554 mm)
17-02-28 20:22:00.960 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:00.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:00.961 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:00.962 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:22:00.962 -08 000000047 INF: ======================================
17-02-28 20:22:00.962 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:00.963 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:22:00.963 -08 000000039 INF: FPGA: Xmit TDIYPOS 6344522\n
17-02-28 20:22:01.001 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:01.022 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:22:01.022 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:01.024 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:22:01.024 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6435447 1 1\n
17-02-28 20:22:01.084 -08 000000078 INF: FPGA: Recv TDIYARM3
17-02-28 20:22:01.084 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:01.086 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:01.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:01.086 -08 000000039 INF: ======================================
17-02-28 20:22:01.087 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:01.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:01.088 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:01.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:01.089 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:01.090 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:22:01.090 -08 000000108 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:22:01.090 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:22:01.090 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:22:01.090 -08 000000066 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:22:01.090 -08 000000066 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:22:01.091 -08 000000108 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:22:01.091 -08 000000108 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:22:01.091 -08 000000108 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:22:01.092 -08 000000108 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:22:01.094 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 62, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:22:01.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:22:01.274 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:22:01.274 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:22:01.374 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:22:01.458 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:22:01.458 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:22:01.458 -08 000000108 INF: Excitation Filter 1: Moved -107 steps in 367.4317 ms
17-02-28 20:22:01.458 -08 000000108 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.6054 ms
17-02-28 20:22:01.458 -08 000000108 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7142 ms
17-02-28 20:22:01.458 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 367.6492 ms
17-02-28 20:22:01.458 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.0495 ms
17-02-28 20:22:01.458 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.1187 ms
17-02-28 20:22:01.459 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:01.459 -08 000000108 INF: ======================================
17-02-28 20:22:01.459 -08 000000066 INF: ======================================
17-02-28 20:22:01.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:01.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:01.462 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:22:01.462 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:01.462 -08 000000058 INF: ===================FPGA Z Wait===================
17-02-28 20:22:01.462 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:01.462 -08 000000058 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:22:01.462 -08 000000047 INF: Y Motor: Moving to 14.9061 mm @6.500 mm/sec, started at 64.5545 mm
17-02-28 20:22:01.462 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:01.462 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:01.462 -08 000000101 INF: ===================Camera TDI, Parallel===================
17-02-28 20:22:01.463 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:22:01.463 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:22:01.463 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:22:01.463 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:22:01.465 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:01.465 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:01.466 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:01.466 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:01.522 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:22:01.522 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:01.522 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:01.559 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:01.587 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:22:01.587 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:01.615 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:01.615 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:01.618 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:01.618 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:01.648 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Set target position to 990613 encoder counts
17-02-28 20:22:01.649 -08 000000047 INF: Y Motor: Xmit s r0xca 990613\r
17-02-28 20:22:01.711 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:22:01.711 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:22:01.711 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:01.765 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:01.765 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:01.768 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:01.768 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:01.773 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:22:01.773 -08 000000047 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:22:01.773 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:01.833 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:22:01.833 -08 000000058 INF: ======================================
17-02-28 20:22:01.898 -08 000000047 INF: Y Motor: Unshifted Position: 5893590
17-02-28 20:22:01.898 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:01.915 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:01.915 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:01.915 -08 000000050 INF: ===================Camera #0 Frame #4===================
17-02-28 20:22:01.918 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:22:01.918 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:01.918 -08 000000036 INF: ===================Camera #2 Frame #5===================
17-02-28 20:22:01.948 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:01.958 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:02.058 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:22:02.071 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:02.078 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:22:02.078 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:22:02.078 -08 000000050 INF: ===================Camera #0 Frame #10===================
17-02-28 20:22:02.088 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:22:02.088 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:22:02.088 -08 000000036 INF: ===================Camera #2 Frame #11===================
17-02-28 20:22:02.147 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:02.210 -08 000000047 INF: Y Motor: Unshifted Position: 5690149
17-02-28 20:22:02.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:02.252 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:22:02.252 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:22:02.252 -08 000000050 INF: ===================Camera #0 Frame #17===================
17-02-28 20:22:02.257 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:22:02.257 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:22:02.257 -08 000000036 INF: ===================Camera #2 Frame #17===================
17-02-28 20:22:02.260 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:02.334 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:02.334 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:22:02.384 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:02.424 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:22:02.424 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:22:02.424 -08 000000050 INF: ===================Camera #0 Frame #23===================
17-02-28 20:22:02.426 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:22:02.426 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:22:02.426 -08 000000036 INF: ===================Camera #2 Frame #23===================
17-02-28 20:22:02.434 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP11904R\r
17-02-28 20:22:02.521 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:02.522 -08 000000047 INF: Y Motor: Unshifted Position: 5487356
17-02-28 20:22:02.572 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:02.593 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:22:02.593 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:22:02.593 -08 000000050 INF: ===================Camera #0 Frame #29===================
17-02-28 20:22:02.595 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:22:02.595 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:22:02.595 -08 000000036 INF: ===================Camera #2 Frame #30===================
17-02-28 20:22:02.621 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:02.697 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:02.709 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:02.763 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:22:02.763 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:22:02.763 -08 000000050 INF: ===================Camera #0 Frame #36===================
17-02-28 20:22:02.767 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:22:02.767 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:22:02.767 -08 000000036 INF: ===================Camera #2 Frame #36===================
17-02-28 20:22:02.834 -08 000000047 INF: Y Motor: Unshifted Position: 5284116
17-02-28 20:22:02.884 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:02.934 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:22:02.934 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:22:02.934 -08 000000050 INF: ===================Camera #0 Frame #42===================
17-02-28 20:22:02.936 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:22:02.936 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:22:02.936 -08 000000036 INF: ===================Camera #2 Frame #42===================
17-02-28 20:22:02.959 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:03.009 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.020 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:03.103 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:22:03.103 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:22:03.103 -08 000000050 INF: ===================Camera #0 Frame #48===================
17-02-28 20:22:03.105 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:22:03.105 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:22:03.105 -08 000000036 INF: ===================Camera #2 Frame #48===================
17-02-28 20:22:03.144 -08 000000047 INF: Y Motor: Unshifted Position: 5081959
17-02-28 20:22:03.194 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:03.271 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:22:03.271 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:22:03.271 -08 000000050 INF: ===================Camera #0 Frame #54===================
17-02-28 20:22:03.274 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:22:03.274 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:22:03.274 -08 000000036 INF: ===================Camera #2 Frame #55===================
17-02-28 20:22:03.320 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.333 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:03.440 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:22:03.440 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:22:03.442 -08 000000050 INF: ===================Camera #0 Frame #61===================
17-02-28 20:22:03.457 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:22:03.457 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:22:03.457 -08 000000036 INF: ===================Camera #2 Frame #61===================
17-02-28 20:22:03.458 -08 000000047 INF: Y Motor: Unshifted Position: 4878511
17-02-28 20:22:03.508 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.583 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:03.613 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:22:03.613 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:22:03.613 -08 000000050 INF: ===================Camera #0 Frame #67===================
17-02-28 20:22:03.627 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:22:03.627 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:22:03.627 -08 000000036 INF: ===================Camera #2 Frame #68===================
17-02-28 20:22:03.632 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.643 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:03.770 -08 000000047 INF: Y Motor: Unshifted Position: 4676792
17-02-28 20:22:03.783 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:22:03.783 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:22:03.783 -08 000000050 INF: ===================Camera #0 Frame #73===================
17-02-28 20:22:03.802 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:22:03.802 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:22:03.802 -08 000000036 INF: ===================Camera #2 Frame #74===================
17-02-28 20:22:03.820 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.893 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:03.946 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:03.951 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:22:03.951 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:22:03.951 -08 000000050 INF: ===================Camera #0 Frame #79===================
17-02-28 20:22:03.956 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:03.971 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:22:03.971 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:22:03.971 -08 000000036 INF: ===================Camera #2 Frame #80===================
17-02-28 20:22:04.082 -08 000000047 INF: Y Motor: Unshifted Position: 4472468
17-02-28 20:22:04.120 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:22:04.120 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:22:04.120 -08 000000050 INF: ===================Camera #0 Frame #86===================
17-02-28 20:22:04.132 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:04.141 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:22:04.141 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:22:04.141 -08 000000036 INF: ===================Camera #2 Frame #86===================
17-02-28 20:22:04.206 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:04.255 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:04.269 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:04.300 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:22:04.300 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:22:04.300 -08 000000050 INF: ===================Camera #0 Frame #92===================
17-02-28 20:22:04.319 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:22:04.319 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:22:04.319 -08 000000036 INF: ===================Camera #2 Frame #93===================
17-02-28 20:22:04.393 -08 000000047 INF: Y Motor: Unshifted Position: 4270322
17-02-28 20:22:04.443 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:04.476 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:22:04.476 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:22:04.476 -08 000000050 INF: ===================Camera #0 Frame #99===================
17-02-28 20:22:04.499 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:22:04.499 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:22:04.499 -08 000000036 INF: ===================Camera #2 Frame #100===================
17-02-28 20:22:04.519 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:04.569 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:04.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:04.658 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:22:04.658 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:22:04.658 -08 000000050 INF: ===================Camera #0 Frame #105===================
17-02-28 20:22:04.682 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:22:04.682 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:22:04.682 -08 000000036 INF: ===================Camera #2 Frame #106===================
17-02-28 20:22:04.705 -08 000000047 INF: Y Motor: Unshifted Position: 4067510
17-02-28 20:22:04.755 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:04.830 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:04.834 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:22:04.834 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:22:04.834 -08 000000050 INF: ===================Camera #0 Frame #112===================
17-02-28 20:22:04.852 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:22:04.852 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:22:04.852 -08 000000036 INF: ===================Camera #2 Frame #113===================
17-02-28 20:22:04.879 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:04.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:05.010 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:22:05.010 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:22:05.010 -08 000000050 INF: ===================Camera #0 Frame #118===================
17-02-28 20:22:05.017 -08 000000047 INF: Y Motor: Unshifted Position: 3864497
17-02-28 20:22:05.027 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:22:05.027 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:22:05.027 -08 000000036 INF: ===================Camera #2 Frame #119===================
17-02-28 20:22:05.067 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:05.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:05.180 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:22:05.180 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:22:05.180 -08 000000050 INF: ===================Camera #0 Frame #125===================
17-02-28 20:22:05.193 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:05.196 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:22:05.196 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:22:05.196 -08 000000036 INF: ===================Camera #2 Frame #125===================
17-02-28 20:22:05.204 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:05.329 -08 000000047 INF: Y Motor: Unshifted Position: 3661691
17-02-28 20:22:05.351 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:22:05.351 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:22:05.351 -08 000000050 INF: ===================Camera #0 Frame #131===================
17-02-28 20:22:05.365 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:22:05.365 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:22:05.365 -08 000000036 INF: ===================Camera #2 Frame #132===================
17-02-28 20:22:05.379 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:05.454 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:05.504 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:05.517 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:05.519 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:22:05.519 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:22:05.519 -08 000000050 INF: ===================Camera #0 Frame #137===================
17-02-28 20:22:05.548 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:22:05.548 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:22:05.548 -08 000000036 INF: ===================Camera #2 Frame #138===================
17-02-28 20:22:05.640 -08 000000047 INF: Y Motor: Unshifted Position: 3458031
17-02-28 20:22:05.687 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:22:05.687 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:22:05.687 -08 000000050 INF: ===================Camera #0 Frame #143===================
17-02-28 20:22:05.690 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:05.717 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:22:05.717 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:22:05.717 -08 000000036 INF: ===================Camera #2 Frame #144===================
17-02-28 20:22:05.767 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:05.816 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:05.827 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:05.855 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:22:05.855 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:22:05.855 -08 000000050 INF: ===================Camera #0 Frame #150===================
17-02-28 20:22:05.887 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:22:05.887 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:22:05.887 -08 000000036 INF: ===================Camera #2 Frame #151===================
17-02-28 20:22:05.954 -08 000000047 INF: Y Motor: Unshifted Position: 3256534
17-02-28 20:22:06.004 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:06.026 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:22:06.026 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:22:06.026 -08 000000050 INF: ===================Camera #0 Frame #156===================
17-02-28 20:22:06.059 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:22:06.059 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:22:06.059 -08 000000036 INF: ===================Camera #2 Frame #157===================
17-02-28 20:22:06.077 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:06.131 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:06.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:06.194 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:22:06.194 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:22:06.194 -08 000000050 INF: ===================Camera #0 Frame #162===================
17-02-28 20:22:06.230 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:22:06.230 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:22:06.230 -08 000000036 INF: ===================Camera #2 Frame #163===================
17-02-28 20:22:06.266 -08 000000047 INF: Y Motor: Unshifted Position: 3052222
17-02-28 20:22:06.317 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:06.364 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:22:06.364 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:22:06.364 -08 000000050 INF: ===================Camera #0 Frame #168===================
17-02-28 20:22:06.391 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:06.400 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:22:06.400 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:22:06.400 -08 000000036 INF: ===================Camera #2 Frame #170===================
17-02-28 20:22:06.441 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:06.452 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:06.536 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:22:06.536 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:22:06.536 -08 000000050 INF: ===================Camera #0 Frame #175===================
17-02-28 20:22:06.572 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:22:06.572 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:22:06.572 -08 000000036 INF: ===================Camera #2 Frame #176===================
17-02-28 20:22:06.579 -08 000000047 INF: Y Motor: Unshifted Position: 2849425
17-02-28 20:22:06.629 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:06.702 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:06.707 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:22:06.707 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:22:06.707 -08 000000050 INF: ===================Camera #0 Frame #181===================
17-02-28 20:22:06.741 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:22:06.741 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:22:06.741 -08 000000036 INF: ===================Camera #2 Frame #182===================
17-02-28 20:22:06.754 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:06.765 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:06.875 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:22:06.875 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:22:06.875 -08 000000050 INF: ===================Camera #0 Frame #187===================
17-02-28 20:22:06.890 -08 000000047 INF: Y Motor: Unshifted Position: 2647062
17-02-28 20:22:06.910 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:22:06.910 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:22:06.910 -08 000000036 INF: ===================Camera #2 Frame #188===================
17-02-28 20:22:06.940 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.015 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:07.043 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:22:07.043 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:22:07.043 -08 000000050 INF: ===================Camera #0 Frame #193===================
17-02-28 20:22:07.066 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.077 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:07.080 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:22:07.080 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:22:07.080 -08 000000036 INF: ===================Camera #2 Frame #195===================
17-02-28 20:22:07.202 -08 000000047 INF: Y Motor: Unshifted Position: 2444266
17-02-28 20:22:07.212 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:22:07.212 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:22:07.212 -08 000000050 INF: ===================Camera #0 Frame #199===================
17-02-28 20:22:07.252 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.252 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:22:07.252 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:22:07.252 -08 000000036 INF: ===================Camera #2 Frame #201===================
17-02-28 20:22:07.327 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:07.378 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.380 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:22:07.380 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:22:07.380 -08 000000050 INF: ===================Camera #0 Frame #206===================
17-02-28 20:22:07.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:07.421 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:22:07.421 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:22:07.421 -08 000000036 INF: ===================Camera #2 Frame #207===================
17-02-28 20:22:07.515 -08 000000047 INF: Y Motor: Unshifted Position: 2240595
17-02-28 20:22:07.551 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:22:07.551 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:22:07.551 -08 000000050 INF: ===================Camera #0 Frame #212===================
17-02-28 20:22:07.565 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.590 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:22:07.590 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:22:07.590 -08 000000036 INF: ===================Camera #2 Frame #213===================
17-02-28 20:22:07.639 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:07.689 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.699 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:07.719 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:22:07.719 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:22:07.719 -08 000000050 INF: ===================Camera #0 Frame #218===================
17-02-28 20:22:07.759 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:22:07.759 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:22:07.759 -08 000000036 INF: ===================Camera #2 Frame #220===================
17-02-28 20:22:07.825 -08 000000047 INF: Y Motor: Unshifted Position: 2037149
17-02-28 20:22:07.875 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:07.887 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:22:07.887 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:22:07.887 -08 000000050 INF: ===================Camera #0 Frame #224===================
17-02-28 20:22:07.931 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:22:07.931 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:22:07.931 -08 000000036 INF: ===================Camera #2 Frame #226===================
17-02-28 20:22:07.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:08.003 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:08.055 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:22:08.055 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:22:08.056 -08 000000050 INF: ===================Camera #0 Frame #231===================
17-02-28 20:22:08.100 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:22:08.100 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:22:08.100 -08 000000036 INF: ===================Camera #2 Frame #232===================
17-02-28 20:22:08.139 -08 000000047 INF: Y Motor: Unshifted Position: 1835427
17-02-28 20:22:08.189 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.226 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:22:08.226 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:22:08.226 -08 000000050 INF: ===================Camera #0 Frame #237===================
17-02-28 20:22:08.262 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:08.269 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:22:08.269 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:22:08.269 -08 000000036 INF: ===================Camera #2 Frame #238===================
17-02-28 20:22:08.316 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:08.394 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:22:08.394 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:22:08.394 -08 000000050 INF: ===================Camera #0 Frame #243===================
17-02-28 20:22:08.438 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:22:08.438 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:22:08.438 -08 000000036 INF: ===================Camera #2 Frame #245===================
17-02-28 20:22:08.449 -08 000000047 INF: Y Motor: Unshifted Position: 1631974
17-02-28 20:22:08.499 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.562 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:22:08.562 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:22:08.562 -08 000000050 INF: ===================Camera #0 Frame #249===================
17-02-28 20:22:08.576 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:08.610 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:22:08.610 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:22:08.610 -08 000000036 INF: ===================Camera #2 Frame #251===================
17-02-28 20:22:08.625 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.636 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:08.730 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:22:08.730 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:22:08.730 -08 000000050 INF: ===================Camera #0 Frame #255===================
17-02-28 20:22:08.763 -08 000000047 INF: Y Motor: Unshifted Position: 1428957
17-02-28 20:22:08.779 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:22:08.780 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:22:08.780 -08 000000036 INF: ===================Camera #2 Frame #257===================
17-02-28 20:22:08.813 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.886 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:08.898 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:22:08.898 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:22:08.898 -08 000000050 INF: ===================Camera #0 Frame #262===================
17-02-28 20:22:08.938 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:08.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:08.949 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:22:08.949 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:22:08.949 -08 000000036 INF: ===================Camera #2 Frame #263===================
17-02-28 20:22:09.069 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:22:09.069 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:22:09.069 -08 000000050 INF: ===================Camera #0 Frame #268===================
17-02-28 20:22:09.074 -08 000000047 INF: Y Motor: Unshifted Position: 1226148
17-02-28 20:22:09.118 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:22:09.118 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:22:09.118 -08 000000036 INF: ===================Camera #2 Frame #270===================
17-02-28 20:22:09.124 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:09.196 -08 000000105 INF: FPGA: Recv TDIYWAIT
17-02-28 20:22:09.196 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:09.198 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:22:09.199 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:09.199 -08 000000104 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:22:09.199 -08 000000030 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:22:09.199 -08 000000104 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:22:09.199 -08 000000104 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:22:09.199 -08 000000104 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:22:09.199 -08 000000030 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:22:09.199 -08 000000104 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:22:09.199 -08 000000030 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:22:09.199 -08 000000030 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:22:09.200 -08 000000030 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:22:09.237 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:22:09.237 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:22:09.237 -08 000000050 INF: ===================Camera #0 Frame #272===================
17-02-28 20:22:09.248 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:09.249 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:22:09.250 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:09.261 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:09.377 -08 000000050 INF: Camera #0 ReleaseBuffer
17-02-28 20:22:09.377 -08 000000036 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:22:09.377 -08 000000036 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:22:09.377 -08 000000036 INF: ===================Camera #2 Frame #272===================
17-02-28 20:22:09.377 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:22:09.383 -08 000000036 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:22:09.384 -08 000000036 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:09.386 -08 000000047 INF: Y Motor: Unshifted Position: 1023786
17-02-28 20:22:09.405 -08 000000050 INF: ======================================
17-02-28 20:22:09.436 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:09.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:09.550 -08 000000036 INF: Camera #2 ReleaseBuffer
17-02-28 20:22:09.550 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:22:09.570 -08 000000046 INF: FPGA: Recv EX2MV
17-02-28 20:22:09.570 -08 000000046 INF: FPGA: Recv EX1MV
17-02-28 20:22:09.570 -08 000000030 INF: Excitation Filter 1: Moved 107 steps in 370.8566 ms
17-02-28 20:22:09.570 -08 000000104 INF: Excitation Filter 2: Moved 107 steps in 371.0413 ms
17-02-28 20:22:09.570 -08 000000030 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.0011 ms
17-02-28 20:22:09.570 -08 000000030 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.1159 ms
17-02-28 20:22:09.570 -08 000000104 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.1436 ms
17-02-28 20:22:09.570 -08 000000104 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.3197 ms
17-02-28 20:22:09.570 -08 000000030 INF: ======================================
17-02-28 20:22:09.570 -08 000000104 INF: ======================================
17-02-28 20:22:09.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:09.572 -08 000000047 INF: Y Motor: Unshifted Position: 990613
17-02-28 20:22:09.572 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:09.572 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:09.572 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:09.573 -08 000000085 INF: ======================================
17-02-28 20:22:09.583 -08 000000036 INF: ======================================
17-02-28 20:22:09.584 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:22:09.586 -08 000000101 INF: ======================================
17-02-28 20:22:09.637 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:22:09.637 -08 000000047 INF: Y Motor: Moved to 14.9061 after 7863 ms
17-02-28 20:22:09.637 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:09.699 -08 000000047 INF: Y Motor: Recv v 4097\r
17-02-28 20:22:09.699 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:09.699 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:09.761 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:22:09.761 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:09.761 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:09.821 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: Recv v 134217728\r
17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:09.825 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:09.883 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:09.884 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:09.949 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:22:09.949 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:09.949 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:10.009 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:22:10.009 -08 000000047 INF: ======================================
17-02-28 20:22:10.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:10.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:10.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.012 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:22:10.069 -08 000000099 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:22:10.069 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:10.133 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:10.134 -08 000000109 INF: FPGA: Recv TDIYERD 1490614
17-02-28 20:22:10.134 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:22:10.196 -08 000000075 INF: FPGA: Recv ZADCR 31998
17-02-28 20:22:10.196 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.122. Y moved -48.539 mm
17-02-28 20:22:10.196 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:22:10.197 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:10.258 -08 000000108 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:22:10.258 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:22:10.258 -08 000000042 INF: TDIScan finished after 12670.1386 ms
17-02-28 20:22:10.258 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:22:10.258 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:22:10.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.294 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.738 um
17-02-28 20:22:10.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.295 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:22:10.319 -08 000000059 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:22:10.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.320 -08 000000036 INF: ===================Dither Clean Up Command===================
17-02-28 20:22:10.320 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:22:10.320 -08 000000089 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:22:10.320 -08 000000039 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:22:10.321 -08 000000089 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:10.321 -08 000000089 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:10.321 -08 000000086 INF: ======================================
17-02-28 20:22:10.321 -08 000000039 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:22:10.321 -08 000000039 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:22:10.321 -08 000000047 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:22:10.321 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:10.322 -08 000000047 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:22:10.324 -08 000000051 INF: ===================LFT:Extracting coords===================
17-02-28 20:22:10.349 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:10.350 -08 000000051 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:22:10.351 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.351 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.351 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.351 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.351 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:10.351 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:10.351 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:10.351 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:10.381 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:10.381 -08 000000073 INF: FPGA: Recv ZSEL 
17-02-28 20:22:10.381 -08 000000047 INF: FPGA: Xmit ZDACW 39366\n
17-02-28 20:22:10.381 -08 000000039 INF: ======================================
17-02-28 20:22:10.383 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:22:10.383 -08 000000089 INF: ======================================
17-02-28 20:22:10.425 -08 000000109 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:10.425 -08 000000050 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:10.426 -08 000000033 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:10.434 -08 000000078 INF: FC:B, C:3,L:1, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:10.444 -08 000000105 INF: FPGA: Recv ZDACW 
17-02-28 20:22:10.445 -08 000000047 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:22:10.445 -08 000000047 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:22:10.447 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:10.506 -08 000000086 INF: FPGA: Recv TDIBB
17-02-28 20:22:10.506 -08 000000047 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:22:10.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:10.507 -08 000000047 INF: ======================================
17-02-28 20:22:10.576 -08 000000050 INF: LFT found best fwhm score 2.000378 in 151 ms
17-02-28 20:22:10.577 -08 000000050 INF: LFT found good score at index 1493 with fwhm value 2.000378. Next cycle, cycle 4 starting Z position for top surface is at -0.152 mm FC:B, C:3,L:1,T
17-02-28 20:22:10.577 -08 000000109 INF: LFT found best fwhm score 2.000627 in 152 ms
17-02-28 20:22:10.577 -08 000000109 INF: LFT found good score at index 3121 with fwhm value 2.000627. Next cycle, cycle 4 starting Z position for top surface is at -0.152 mm FC:B, C:3,L:1,T
17-02-28 20:22:10.577 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.577 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.577 -08 000000050 INF: ======================================
17-02-28 20:22:10.577 -08 000000033 INF: LFT found best fwhm score 2.000098 in 151 ms
17-02-28 20:22:10.577 -08 000000033 INF: LFT found good score at index 8729 with fwhm value 2.000098. Next cycle, cycle 4 starting Z position for top surface is at -0.151 mm FC:B, C:3,L:1,T
17-02-28 20:22:10.577 -08 000000109 INF: ======================================
17-02-28 20:22:10.577 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.578 -08 000000033 INF: ======================================
17-02-28 20:22:10.599 -08 000000078 INF: LFT found best fwhm score 2.08486 in 165 ms
17-02-28 20:22:10.599 -08 000000078 INF: LFT found good score at index 7137 with fwhm value 2.08486. Next cycle, cycle 4 starting Z position for top surface is at -0.151 mm FC:B, C:3,L:1,T
17-02-28 20:22:10.599 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:22:10.599 -08 000000078 INF: ======================================
17-02-28 20:22:10.601 -08 000000051 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:10.602 -08 000000051 INF: LFT weighted average best Z for top surface is at -0.151mm FC:B, C:3,L:1,T
17-02-28 20:22:10.602 -08 000000051 INF: ======================================
17-02-28 20:22:10.603 -08 000000036 INF: ======================================
17-02-28 20:22:10.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:22:10.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:22:10.607 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:22:10.607 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Aspirating port PortB===================
17-02-28 20:22:10.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:22:10.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1, Swath 2 - X = 69.73964 Y = 39.76308===================
17-02-28 20:22:10.630 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:22:10.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:22:10.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:22:10.631 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:10.631 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:22:10.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 1===================
17-02-28 20:22:10.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:22:10.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:10.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:10.650 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:10.650 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:10.696 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":1,"Tile":1201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF202","HCSMMF199","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.747 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:10.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:10.748 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:22:10.748 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:22:10.757 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:10.867 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:10.872 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":1,"Tile":1209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF270","HCSMMF208","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.882 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":1,"Tile":1203,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF200","HCSMMF210","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.886 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":1,"Tile":1208,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF232","HCSMMF181","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.889 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":1,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF189","HCSMMF260","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.891 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":1,"Tile":1210,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF195","HCSMMF223","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.892 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":1,"Tile":1205,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF179","HCSMMF188","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.894 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":1,"Tile":1202,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF271","HCSMMF193","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.896 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":1,"Tile":1211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF256","HCSMMF217","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.899 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":1,"Tile":1207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF264","HCSMMF258","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.930 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":1,"Tile":1206,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF272","HCSMMF231","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.931 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":1,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF225","HCSMMF201","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.932 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":1,"Tile":1214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF247","HCSMMF176","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.933 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":1,"Tile":1204,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF237","HCSMMF191","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.934 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":1,"Tile":1213,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF212","HCSMMF187","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.935 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":1,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF233","HCSMMF255","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.935 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":1,"Tile":1216,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF183","HCSMMF287","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.936 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":1,"Tile":1218,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF262","HCSMMF269","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.937 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":1,"Tile":1222,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF203","HCSMMF280","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.938 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":1,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF207","HCSMMF263","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.944 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":1,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF268","HCSMMF196","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.944 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":1,"Tile":1226,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF177","HCSMMF277","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.945 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":1,"Tile":1228,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF282","HCSMMF230","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.946 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":1,"Tile":1220,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF197","HCSMMF205","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.947 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":1,"Tile":1227,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF246","HCSMMF238","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.947 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":1,"Tile":1221,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF216","HCSMMF239","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.950 -08 000000075 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":1,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF267","HCSMMF274","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.951 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":1,"Tile":1224,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF206","HCSMMF244","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:10.953 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:10.959 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:22:11.056 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:11.056 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:22:11.092 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:11.098 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:22:11.115 -08 000000095 INF: FPGA: Recv MIOCOMPR
17-02-28 20:22:11.115 -08 000000042 INF: Compensator: Moved OutOfPath in 367 ms
17-02-28 20:22:11.115 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:22:11.116 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:11.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:11.118 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:11.118 -08 000000089 INF: ===================Move Tilt Motor 1===================
17-02-28 20:22:11.118 -08 000000109 INF: ===================Move Tilt Motor 2===================
17-02-28 20:22:11.118 -08 000000089 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0762 mm, delta = -0.0757 mm
17-02-28 20:22:11.118 -08 000000089 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:11.118 -08 000000109 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.2642 mm, delta = 0.1283 mm
17-02-28 20:22:11.118 -08 000000075 INF: ===================Move Tilt Motor 3===================
17-02-28 20:22:11.118 -08 000000075 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.2113 mm, delta = 0.1278 mm
17-02-28 20:22:11.119 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:11.121 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:11.177 -08 000000078 INF: FPGA: Recv T1RD 19984
17-02-28 20:22:11.177 -08 000000078 INF: FPGA: Recv T2RD 20725
17-02-28 20:22:11.177 -08 000000078 INF: FPGA: Recv T3RD 20517
17-02-28 20:22:11.177 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3419 + 3/6
17-02-28 20:22:11.177 -08 000000075 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:22:11.177 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3454 + 1/6
17-02-28 20:22:11.177 -08 000000109 INF: Tilt Motor 2: Moving to 21230 encoder counts
17-02-28 20:22:11.177 -08 000000075 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:22:11.177 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3330 + 4/6
17-02-28 20:22:11.177 -08 000000089 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:22:11.178 -08 000000089 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:22:11.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:11.180 -08 000000109 INF: FPGA: Xmit T2MOVETO 21230\n
17-02-28 20:22:11.210 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:11.216 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:22:11.315 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:11.321 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:22:11.365 -08 000000087 INF: FPGA: Recv T1MOVETO 49
17-02-28 20:22:11.365 -08 000000089 INF: Tilt Motor 1: To move from 5.076 to 5.000 (-0.076 mm) should take 50 steps, but required 49 steps (0.075 mm). Slippage = -0.002 mm (0.02%)
17-02-28 20:22:11.365 -08 000000089 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:11.405 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:11.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:11.429 -08 000000039 INF: FPGA: Recv T1RD 19693
17-02-28 20:22:11.429 -08 000000039 INF: FPGA: Recv T3MOVETO 83
17-02-28 20:22:11.429 -08 000000039 INF: FPGA: Recv T2MOVETO 83
17-02-28 20:22:11.430 -08 000000109 INF: Tilt Motor 2: To move from 5.264 to 5.392 (0.128 mm) should take 84 steps, but required 83 steps (0.126 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:22:11.430 -08 000000075 INF: Tilt Motor 3: To move from 5.211 to 5.339 (0.128 mm) should take 84 steps, but required 83 steps (0.126 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:22:11.430 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:22:11.430 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:11.431 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:11.433 -08 000000089 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:11.490 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:11.490 -08 000000108 INF: FPGA: Recv T2RD 21224
17-02-28 20:22:11.491 -08 000000108 INF: FPGA: Recv T3RD 21015
17-02-28 20:22:11.491 -08 000000108 INF: FPGA: Recv T1RD 19693
17-02-28 20:22:11.491 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:22:11.491 -08 000000089 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:11.491 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:22:11.491 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:22:11.492 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:11.494 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:11.552 -08 000000037 INF: FPGA: Recv T1RD 19693
17-02-28 20:22:11.552 -08 000000037 INF: FPGA: Recv T3RD 21015
17-02-28 20:22:11.552 -08 000000037 INF: FPGA: Recv T2RD 21224
17-02-28 20:22:11.552 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:22:11.552 -08 000000089 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:22:11.552 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:22:11.552 -08 000000109 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:11.552 -08 000000089 INF: Tilt Motor 1: After move to 5.0005, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:11.552 -08 000000089 INF: Tilt Motor 1: Moved to 5.0020 after 434.3166 ms
17-02-28 20:22:11.552 -08 000000089 INF: ======================================
17-02-28 20:22:11.553 -08 000000075 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:11.617 -08 000000036 INF: FPGA: Recv T2RD 21224
17-02-28 20:22:11.617 -08 000000036 INF: FPGA: Recv T3RD 21015
17-02-28 20:22:11.617 -08 000000075 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:22:11.617 -08 000000075 INF: Tilt Motor 3: After move to 5.3391, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:11.617 -08 000000075 INF: Tilt Motor 3: Moved to 5.3378 after 498.9889 ms
17-02-28 20:22:11.617 -08 000000109 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:22:11.617 -08 000000109 INF: Tilt Motor 2: After move to 5.3924, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:11.617 -08 000000109 INF: Tilt Motor 2: Moved to 5.3909 after 499.4817 ms
17-02-28 20:22:11.617 -08 000000075 INF: ======================================
17-02-28 20:22:11.618 -08 000000109 INF: ======================================
17-02-28 20:22:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:11.626 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:22:11.634 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:22:11.634 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:22:11.634 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:22:11.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:11.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:11.638 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:22:11.638 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:22:11.639 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:22:11.678 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:11.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:11.679 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:22:11.679 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1502 mm
17-02-28 20:22:11.679 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:22:11.692 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:22:11.740 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:11.740 -08 000000035 INF: FPGA: Recv ZTRG 
17-02-28 20:22:11.740 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:22:11.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:11.807 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:22:11.807 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:22:11.807 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:22:11.863 -08 000000086 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:22:11.863 -08 000000086 INF: FPGA: Recv ZMV 
17-02-28 20:22:11.863 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:22:11.863 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 55.5507 ms
17-02-28 20:22:11.863 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:22:11.929 -08 000000108 INF: FPGA: Recv ZDACR 60292
17-02-28 20:22:11.929 -08 000000042 INF: Z Motor: MoveAndTrigger took 250.434 ms w/comms
17-02-28 20:22:11.929 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:11.929 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.6435 ms
17-02-28 20:22:11.930 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:11.930 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:22:11.939 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:22:11.939 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:11.939 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:11.939 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:22:11.939 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:22:11.988 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:12.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:12.008 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:22:12.017 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:22:12.017 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:12.017 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:12.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:12.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:22:12.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:12.020 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-02-28 20:22:12.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:12.021 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:12.026 -08 000000073 INF: ===================Move X,Y===================
17-02-28 20:22:12.026 -08 000000086 INF: ===================MoveEmissionFilters===================
17-02-28 20:22:12.027 -08 000000073 INF: ===================Move X,Y, Parallel===================
17-02-28 20:22:12.028 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:12.028 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:12.028 -08 000000085 INF: ===================Move X Motor without settling===================
17-02-28 20:22:12.028 -08 000000085 INF: X Motor: Xmit PR VM\n
17-02-28 20:22:12.029 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:12.029 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:12.030 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:12.030 -08 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:22:12.030 -08 000000046 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:12.030 -08 000000037 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:22:12.030 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:12.030 -08 000000087 INF: ======================================
17-02-28 20:22:12.030 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:12.030 -08 000000104 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:22:12.031 -08 000000037 INF: ======================================
17-02-28 20:22:12.031 -08 000000104 INF: ======================================
17-02-28 20:22:12.031 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:12.031 -08 000000010 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:12.032 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:22:12.032 -08 000000069 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:22:12.032 -08 000000069 INF: ======================================
17-02-28 20:22:12.032 -08 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:22:12.033 -08 000000046 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9061 mm
17-02-28 20:22:12.033 -08 000000010 INF: ======================================
17-02-28 20:22:12.033 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:12.033 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:12.034 -08 000000037 INF: ======================================
17-02-28 20:22:12.034 -08 000000105 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:22:12.034 -08 000000036 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:22:12.034 -08 000000036 INF: ======================================
17-02-28 20:22:12.034 -08 000000105 INF: ======================================
17-02-28 20:22:12.035 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:12.036 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:22:12.037 -08 000000087 INF: ======================================
17-02-28 20:22:12.037 -08 000000101 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:12.037 -08 000000047 INF: ======================================
17-02-28 20:22:12.038 -08 000000075 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:12.039 -08 000000101 INF: ======================================
17-02-28 20:22:12.039 -08 000000075 INF: ======================================
17-02-28 20:22:12.041 -08 000000086 INF: ======================================
17-02-28 20:22:12.056 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:22:12.056 -08 000000085 INF: X Motor: Xmit PR VI\n
17-02-28 20:22:12.056 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:12.116 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:22:12.117 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:22:12.117 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:12.117 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Moving to 71.9506 mm @15.000 mm/sec, started at 69.6982 mm
17-02-28 20:22:12.117 -08 000000085 INF: X Motor: Xmit MA 5305\n
17-02-28 20:22:12.179 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:22:12.179 -08 000000085 INF: X Motor: Recv MA 5305\r\n>
17-02-28 20:22:12.179 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:12.179 -08 000000085 INF: X Motor: WaitUntilStopped 60150
17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:22:12.241 -08 000000046 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:22:12.302 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:22:12.302 -08 000000046 INF: Y Motor: Start the move command
17-02-28 20:22:12.302 -08 000000046 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:12.366 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:12.367 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:22:12.367 -08 000000046 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:22:12.367 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:12.426 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:12.491 -08 000000046 INF: Y Motor: Unshifted Position: 1073438
17-02-28 20:22:12.541 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:12.665 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:12.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:12.739 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:12.802 -08 000000046 INF: Y Motor: Unshifted Position: 1783111
17-02-28 20:22:12.802 -08 000000085 INF: X Motor: Xmit PR ER\n
17-02-28 20:22:12.852 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:12.865 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:22:12.865 -08 000000085 INF: X Motor: Moved to 71.9517 after 686 ms
17-02-28 20:22:12.865 -08 000000085 INF: ======================================
17-02-28 20:22:12.977 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:12.989 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:13.052 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:13.115 -08 000000046 INF: Y Motor: Unshifted Position: 2565635
17-02-28 20:22:13.165 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:13.288 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:13.302 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:13.363 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:13.425 -08 000000046 INF: Y Motor: Unshifted Position: 3343906
17-02-28 20:22:13.475 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:13.602 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:13.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:13.675 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:13.738 -08 000000046 INF: Y Motor: Unshifted Position: 4123978
17-02-28 20:22:13.788 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:13.914 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:13.925 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:13.987 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:14.049 -08 000000046 INF: Y Motor: Unshifted Position: 4904758
17-02-28 20:22:14.099 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:14.224 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:14.237 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:14.300 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:14.363 -08 000000046 INF: Y Motor: Unshifted Position: 5685313
17-02-28 20:22:14.413 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:14.538 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:14.550 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:14.612 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:14.674 -08 000000046 INF: Y Motor: Unshifted Position: 5953352
17-02-28 20:22:14.674 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:14.674 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:14.739 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:22:14.739 -08 000000046 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-02-28 20:22:14.739 -08 000000046 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:14.813 -08 000000046 INF: Y Motor: Recv v 4096\r
17-02-28 20:22:14.813 -08 000000046 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:14.813 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:14.861 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:22:14.861 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:14.861 -08 000000046 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:14.862 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:14.924 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: Recv v 402653184\r
17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:14.925 -08 000000046 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:14.988 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:15.051 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:22:15.051 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:15.051 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:15.110 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:22:15.110 -08 000000046 INF: ======================================
17-02-28 20:22:15.111 -08 000000073 INF: ===================Move X,Y===================
17-02-28 20:22:15.113 -08 000000073 INF: ======================================
17-02-28 20:22:15.115 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:15.116 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:15.117 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:22:15.117 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:22:15.174 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:15.174 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:15.174 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:22:15.234 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:22:15.235 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:15.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:22:15.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:15.235 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:15.296 -08 000000059 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:22:15.296 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:22:15.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:15.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:15.298 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:22:15.299 -08 000000035 INF: ===================Set YMotor gains for scans===================
17-02-28 20:22:15.299 -08 000000052 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:22:15.299 -08 000000035 INF: ======================================
17-02-28 20:22:15.300 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:22:15.301 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:22:15.302 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:22:15.302 -08 000000052 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:22:15.361 -08 000000086 INF: FPGA: Recv TDIYPOS
17-02-28 20:22:15.362 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:22:15.363 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:22:15.363 -08 000000052 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:22:15.424 -08 000000085 INF: FPGA: Recv TDIYARM2
17-02-28 20:22:15.424 -08 000000052 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:22:15.426 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:22:15.429 -08 000000052 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:22:15.429 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:22:15.431 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:22:15.433 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:22:15.434 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:15.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:15.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:15.798 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:15.803 -08 000000052 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:22:15.803 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:22:15.804 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:15.820 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:22:15.822 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:15.860 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:16.110 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:16.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:16.203 -08 000000052 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:22:16.203 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:22:16.203 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:16.218 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:22:16.220 -08 000000052 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:22:16.221 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:22:16.222 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:16.223 -08 000000052 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:22:16.223 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:16.225 -08 000000052 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:22:16.225 -08 000000052 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:22:16.225 -08 000000052 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:22:16.225 -08 000000052 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:22:16.298 -08 000000059 INF: FPGA: Recv ZYT 
17-02-28 20:22:16.298 -08 000000052 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:22:16.298 -08 000000052 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:22:16.357 -08 000000038 INF: FPGA: Recv ZARM
17-02-28 20:22:16.357 -08 000000052 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.7687 ms
17-02-28 20:22:16.357 -08 000000052 INF: Z Motor: ArmAbsStepped took 130.8128 ms
17-02-28 20:22:16.357 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:16.359 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:22:16.360 -08 000000052 INF: ======================================
17-02-28 20:22:16.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:16.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:16.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:16.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:16.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:16.365 -08 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:22:16.365 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:22:16.365 -08 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:22:16.365 -08 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:22:16.365 -08 000000085 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:22:16.365 -08 000000085 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:22:16.365 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:22:16.366 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:22:16.366 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:22:16.367 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:22:16.423 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:16.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:16.733 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:22:16.733 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:22:16.733 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 367.7279 ms
17-02-28 20:22:16.733 -08 000000085 INF: Excitation Filter 2: Moved -107 steps in 367.9172 ms
17-02-28 20:22:16.733 -08 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.1449 ms
17-02-28 20:22:16.734 -08 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.3244 ms
17-02-28 20:22:16.734 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.9092 ms
17-02-28 20:22:16.734 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.2506 ms
17-02-28 20:22:16.734 -08 000000085 INF: ======================================
17-02-28 20:22:16.734 -08 000000050 INF: ======================================
17-02-28 20:22:16.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:16.735 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:16.737 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:16.737 -08 000000105 INF: ===================Serial===================
17-02-28 20:22:16.738 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:22:16.738 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:16.738 -08 000000105 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:22:16.738 -08 000000099 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:16.738 -08 000000105 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:22:16.738 -08 000000086 INF: ===================Camera TDI, Parallel===================
17-02-28 20:22:16.738 -08 000000099 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:22:16.739 -08 000000099 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:16.739 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:16.739 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:22:16.740 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:22:16.740 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:22:16.741 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:16.741 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:16.742 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:16.742 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:16.743 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:22:16.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:16.797 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:22:16.797 -08 000000099 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:16.797 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:16.858 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:22:16.858 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:16.891 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:16.891 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:16.892 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:16.892 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:22:16.923 -08 000000099 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:22:16.985 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:22:16.985 -08 000000099 INF: Y Motor: Start the move command
17-02-28 20:22:16.985 -08 000000099 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:17.041 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:17.041 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:17.042 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:17.042 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:17.045 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:17.048 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:22:17.048 -08 000000099 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:22:17.048 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.107 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:17.170 -08 000000099 INF: Y Motor: Unshifted Position: 5935481
17-02-28 20:22:17.191 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:17.191 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:17.192 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:17.192 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:17.220 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.341 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:22:17.341 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:22:17.341 -08 000000033 INF: ===================Camera #0 Frame #1===================
17-02-28 20:22:17.342 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:22:17.342 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:22:17.342 -08 000000077 INF: ===================Camera #2 Frame #1===================
17-02-28 20:22:17.345 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:17.421 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:17.483 -08 000000099 INF: Y Motor: Unshifted Position: 5888531
17-02-28 20:22:17.494 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:22:17.494 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:22:17.494 -08 000000033 INF: ===================Camera #0 Frame #3===================
17-02-28 20:22:17.495 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:22:17.495 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:22:17.495 -08 000000077 INF: ===================Camera #2 Frame #3===================
17-02-28 20:22:17.533 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.650 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:17.650 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:17.650 -08 000000033 INF: ===================Camera #0 Frame #4===================
17-02-28 20:22:17.651 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:17.651 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:17.651 -08 000000077 INF: ===================Camera #2 Frame #4===================
17-02-28 20:22:17.659 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:17.731 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:17.796 -08 000000099 INF: Y Motor: Unshifted Position: 5841817
17-02-28 20:22:17.804 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:22:17.804 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:17.804 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:22:17.804 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:17.804 -08 000000033 INF: ===================Camera #0 Frame #5===================
17-02-28 20:22:17.804 -08 000000077 INF: ===================Camera #2 Frame #5===================
17-02-28 20:22:17.846 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.856 -08 000000046 INF: FPGA: Recv ZWAIT 
17-02-28 20:22:17.856 -08 000000046 INF: FPGA: Recv TDIYWAIT
17-02-28 20:22:17.857 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:17.857 -08 000000105 INF: ===================Serial===================
17-02-28 20:22:17.858 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:22:17.858 -08 000000105 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:22:17.859 -08 000000105 INF: ===================Serial===================
17-02-28 20:22:17.859 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:22:17.859 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:22:17.859 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:22:17.859 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:22:17.859 -08 000000073 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:22:17.859 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:22:17.859 -08 000000073 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:22:17.860 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:22:17.860 -08 000000089 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:22:17.860 -08 000000105 INF: ======================================
17-02-28 20:22:17.862 -08 000000089 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:22:17.958 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:22:17.958 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:22:17.958 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:22:17.958 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:22:17.958 -08 000000033 INF: ===================Camera #0 Frame #6===================
17-02-28 20:22:17.958 -08 000000077 INF: ===================Camera #2 Frame #6===================
17-02-28 20:22:17.962 -08 000000077 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:22:17.962 -08 000000033 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:22:17.963 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:17.966 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:17.970 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:17.981 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:17.987 -08 000000077 INF: Camera #2 ReleaseBuffer
17-02-28 20:22:17.987 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:22:17.988 -08 000000077 INF: ======================================
17-02-28 20:22:18.014 -08 000000033 INF: Camera #0 ReleaseBuffer
17-02-28 20:22:18.014 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:22:18.015 -08 000000033 INF: ======================================
17-02-28 20:22:18.017 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:22:18.018 -08 000000086 INF: ======================================
17-02-28 20:22:18.043 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:18.106 -08 000000099 INF: Y Motor: Unshifted Position: 5797061
17-02-28 20:22:18.156 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:18.230 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:22:18.230 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:22:18.230 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 370.5369 ms
17-02-28 20:22:18.230 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.6757 ms
17-02-28 20:22:18.230 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.776 ms
17-02-28 20:22:18.230 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 370.3909 ms
17-02-28 20:22:18.230 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.8297 ms
17-02-28 20:22:18.230 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.903 ms
17-02-28 20:22:18.230 -08 000000073 INF: ======================================
17-02-28 20:22:18.231 -08 000000089 INF: ======================================
17-02-28 20:22:18.232 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:18.233 -08 000000108 INF: ======================================
17-02-28 20:22:18.293 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:18.294 -08 000000099 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:22:18.294 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:18.294 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:18.356 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:22:18.356 -08 000000099 INF: Y Motor: Moved to 62.9704 after 1308 ms
17-02-28 20:22:18.356 -08 000000099 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:18.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:18.420 -08 000000099 INF: Y Motor: Recv v 4097\r
17-02-28 20:22:18.420 -08 000000099 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:18.420 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:18.482 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:22:18.482 -08 000000099 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:18.482 -08 000000099 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: Recv v 134217728\r
17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:18.544 -08 000000099 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:18.607 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:18.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:18.668 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:18.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:18.668 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:18.669 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:22:18.669 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:22:18.669 -08 000000099 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:18.669 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:18.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 5 of 5 seconds left===================
17-02-28 20:22:18.731 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:22:18.731 -08 000000099 INF: ======================================
17-02-28 20:22:18.732 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:18.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:18.734 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:18.734 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:22:18.791 -08 000000072 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:22:18.791 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:18.855 -08 000000023 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:22:18.856 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:22:18.915 -08 000000075 INF: FPGA: Recv ZADCR 2425
17-02-28 20:22:18.915 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:22:18.915 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:22:18.980 -08 000000066 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:22:18.980 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:22:18.980 -08 000000042 INF: TDIScan finished after 6971.0416 ms
17-02-28 20:22:18.980 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:22:18.980 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:22:18.981 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:22:19.042 -08 000000072 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:22:19.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.044 -08 000000073 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:22:19.044 -08 000000077 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:22:19.044 -08 000000078 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:22:19.045 -08 000000073 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:19.045 -08 000000073 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:19.045 -08 000000077 INF: ======================================
17-02-28 20:22:19.045 -08 000000078 INF: ======================================
17-02-28 20:22:19.106 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:22:19.106 -08 000000073 INF: ======================================
17-02-28 20:22:19.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:22:19.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.197 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:22:19.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:22:19.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:22:19.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:19.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:19.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:19.287 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:22:19.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:19.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:22:19.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:22:19.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:19.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 4 of 5 seconds left===================
17-02-28 20:22:19.987 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:22:20.010 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0849248396664047Best Z position at top surface = -0.156685847550001Best Z position at top surface + compensator offset = -0.133985847550001 C:3,L:2,T
17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.156685847550001
17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.96071
17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0849248396664047
17-02-28 20:22:20.011 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61537
17-02-28 20:22:20.011 -08 000000042 INF: Z-height at LaneTopSurface is -0.156685847550001.
17-02-28 20:22:20.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:20.144 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:22:20.144 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:22:20.165 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:20.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Focus Point 1===================
17-02-28 20:22:20.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.167 -08 000000042 INF: Lane 2, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:22:20.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.168 -08 000000047 INF: ===================Move Tilt Motor 1===================
17-02-28 20:22:20.168 -08 000000077 INF: ===================Move Tilt Motor 3===================
17-02-28 20:22:20.168 -08 000000047 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm
17-02-28 20:22:20.169 -08 000000047 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:20.169 -08 000000077 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm
17-02-28 20:22:20.169 -08 000000087 INF: ===================Move Tilt Motor 2===================
17-02-28 20:22:20.169 -08 000000087 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.3909 mm, delta = 0.0015 mm
17-02-28 20:22:20.170 -08 000000077 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:20.172 -08 000000087 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:20.227 -08 000000105 INF: FPGA: Recv T1RD 19693
17-02-28 20:22:20.227 -08 000000105 INF: FPGA: Recv T3RD 21014
17-02-28 20:22:20.227 -08 000000105 INF: FPGA: Recv T2RD 21224
17-02-28 20:22:20.227 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:22:20.227 -08 000000087 INF: Tilt Motor 2: Moving to 21230 encoder counts
17-02-28 20:22:20.227 -08 000000087 INF: FPGA: Xmit T2MOVETO 21230\n
17-02-28 20:22:20.227 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:22:20.227 -08 000000047 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:22:20.227 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6
17-02-28 20:22:20.227 -08 000000077 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:22:20.228 -08 000000047 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:22:20.230 -08 000000077 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:22:20.351 -08 000000099 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:22:20.351 -08 000000099 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:22:20.351 -08 000000099 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:22:20.351 -08 000000077 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:22:20.351 -08 000000087 INF: Tilt Motor 2: To move from 5.391 to 5.392 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:22:20.351 -08 000000047 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:22:20.351 -08 000000077 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:20.354 -08 000000087 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:20.355 -08 000000047 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:20.413 -08 000000037 INF: FPGA: Recv T3RD 21021
17-02-28 20:22:20.413 -08 000000037 INF: FPGA: Recv T2RD 21230
17-02-28 20:22:20.413 -08 000000037 INF: FPGA: Recv T1RD 19687
17-02-28 20:22:20.413 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:22:20.413 -08 000000087 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:20.413 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:22:20.413 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:22:20.414 -08 000000077 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:20.416 -08 000000047 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:20.475 -08 000000078 INF: FPGA: Recv T2RD 21230
17-02-28 20:22:20.475 -08 000000078 INF: FPGA: Recv T3RD 21021
17-02-28 20:22:20.475 -08 000000078 INF: FPGA: Recv T1RD 19687
17-02-28 20:22:20.475 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:22:20.475 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:22:20.475 -08 000000047 INF: FPGA: Xmit T1RD\n
17-02-28 20:22:20.475 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:22:20.476 -08 000000087 INF: FPGA: Xmit T2RD\n
17-02-28 20:22:20.478 -08 000000077 INF: FPGA: Xmit T3RD\n
17-02-28 20:22:20.540 -08 000000086 INF: FPGA: Recv T1RD 19687
17-02-28 20:22:20.540 -08 000000086 INF: FPGA: Recv T2RD 21230
17-02-28 20:22:20.540 -08 000000086 INF: FPGA: Recv T3RD 21021
17-02-28 20:22:20.540 -08 000000077 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:22:20.540 -08 000000087 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:22:20.540 -08 000000077 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:20.540 -08 000000087 INF: Tilt Motor 2: After move to 5.3924, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:20.540 -08 000000077 INF: Tilt Motor 3: Moved to 5.3393 after 371.4132 ms
17-02-28 20:22:20.540 -08 000000087 INF: Tilt Motor 2: Moved to 5.3924 after 371.1181 ms
17-02-28 20:22:20.540 -08 000000047 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:22:20.540 -08 000000047 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:20.540 -08 000000047 INF: Tilt Motor 1: Moved to 5.0005 after 371.839 ms
17-02-28 20:22:20.540 -08 000000077 INF: ======================================
17-02-28 20:22:20.540 -08 000000087 INF: ======================================
17-02-28 20:22:20.540 -08 000000047 INF: ======================================
17-02-28 20:22:20.541 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.543 -08 000000042 INF: ETF Best Z: -0.1339858 mm (35123 DAC)
17-02-28 20:22:20.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.544 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.544 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:22:20.544 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:22:20.956 -08 000000072 INF: FPGA: Recv MIOCOMPF
17-02-28 20:22:20.956 -08 000000042 INF: Compensator: Moved IntoPath in 412 ms
17-02-28 20:22:20.956 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:20.957 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 3 of 5 seconds left===================
17-02-28 20:22:20.958 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:20.963 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39664, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:22:20.964 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50464, Y=39.76308} from estimated center X= 71.91199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:22:20.969 -08 000000042 INF: Swath 0: Converted transform from (-53.12867, 15.48577) pixels to (-0.018285, 0.005175) mm.
17-02-28 20:22:20.975 -08 000000042 INF: Swath 1: Converted transform from (-68.34594, 14.96952) pixels to (-0.02346, 0.005175) mm.
17-02-28 20:22:20.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:22:20.976 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:22:20.976 -08 000000042 INF: Transformed XStagePosition from 71.39664 mm to 71.3783519621938 mm.
17-02-28 20:22:20.987 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5582643555254 mm.
17-02-28 20:22:20.988 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3582643555254 mm.
17-02-28 20:22:20.988 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4490143555254 mm.
17-02-28 20:22:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:22:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:20.990 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:22:20.998 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:20.999 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:21.000 -08 000000089 INF: ===================MoveEmissionFilters===================
17-02-28 20:22:21.000 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:22:21.000 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:21.000 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:21.000 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:22:21.000 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:22:21.001 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:21.001 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:21.001 -08 000000023 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:22:21.001 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:21.001 -08 000000023 INF: Z Motor: Moving to -0.1540 mm, started at -0.0100 mm
17-02-28 20:22:21.001 -08 000000023 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:22:21.001 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:21.001 -08 000000077 INF: ===================Move X Motor without settling===================
17-02-28 20:22:21.001 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:21.001 -08 000000077 INF: X Motor: Xmit PR VM\n
17-02-28 20:22:21.001 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:21.001 -08 000000058 INF: Y Motor: Moving to 64.5583 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:22:21.001 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:21.002 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:21.002 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:21.002 -08 000000109 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:22:21.002 -08 000000039 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:22:21.002 -08 000000039 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:22:21.002 -08 000000059 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:22:21.002 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:22:21.002 -08 000000050 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:22:21.002 -08 000000109 INF: ======================================
17-02-28 20:22:21.003 -08 000000101 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:22:21.003 -08 000000059 INF: ======================================
17-02-28 20:22:21.003 -08 000000050 INF: ======================================
17-02-28 20:22:21.003 -08 000000051 INF: ======================================
17-02-28 20:22:21.003 -08 000000039 INF: ======================================
17-02-28 20:22:21.004 -08 000000101 INF: ======================================
17-02-28 20:22:21.004 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:21.004 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:21.005 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:21.005 -08 000000085 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:22:21.005 -08 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:22:21.005 -08 000000087 INF: ======================================
17-02-28 20:22:21.005 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:21.006 -08 000000033 INF: ======================================
17-02-28 20:22:21.006 -08 000000085 INF: ======================================
17-02-28 20:22:21.006 -08 000000086 INF: ======================================
17-02-28 20:22:21.006 -08 000000052 INF: ======================================
17-02-28 20:22:21.007 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:21.008 -08 000000030 INF: ======================================
17-02-28 20:22:21.009 -08 000000089 INF: ======================================
17-02-28 20:22:21.070 -08 000000072 INF: FPGA: Recv ZTRG 
17-02-28 20:22:21.070 -08 000000023 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:22:21.072 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:22:21.072 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:21.072 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:21.072 -08 000000077 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:22:21.072 -08 000000077 INF: X Motor: Xmit PR VI\n
17-02-28 20:22:21.132 -08 000000089 INF: FPGA: Recv ZYT 
17-02-28 20:22:21.132 -08 000000023 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:22:21.132 -08 000000023 INF: FPGA: Xmit ZMV 40366\n
17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:22:21.134 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:22:21.134 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Moving to 71.3784 mm @15.000 mm/sec, started at 71.9517 mm
17-02-28 20:22:21.134 -08 000000077 INF: X Motor: Xmit MA 5070\n
17-02-28 20:22:21.193 -08 000000086 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:22:21.193 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:22:21.195 -08 000000077 INF: X Motor: Recv MA 5070\r\n>
17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:21.195 -08 000000077 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Set target position to 5955826 encoder counts
17-02-28 20:22:21.195 -08 000000058 INF: Y Motor: Xmit s r0xca 5955826\r
17-02-28 20:22:21.257 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:22:21.257 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:22:21.257 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:21.321 -08 000000059 INF: FPGA: Recv ZMV 
17-02-28 20:22:21.321 -08 000000023 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.927 ms
17-02-28 20:22:21.321 -08 000000023 INF: FPGA: Xmit ZDACR\n
17-02-28 20:22:21.322 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:22:21.322 -08 000000058 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:22:21.322 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:21.383 -08 000000108 INF: FPGA: Recv ZDACR 40366
17-02-28 20:22:21.384 -08 000000023 INF: Z Motor: MoveAndTrigger took 382.944 ms w/comms
17-02-28 20:22:21.384 -08 000000023 INF: Z Motor: After move to -0.1540, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:21.384 -08 000000023 INF: Z Motor: MoveAbsStepped took 383.1204 ms
17-02-28 20:22:21.384 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:21.386 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:22:21.386 -08 000000036 INF: ===================Camera Arm TDI===================
17-02-28 20:22:21.386 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:22:21.387 -08 000000036 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:21.387 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:21.388 -08 000000036 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:21.388 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:22:21.389 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:21.389 -08 000000104 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:22:21.443 -08 000000039 INF: FPGA: Recv ZSEL 
17-02-28 20:22:21.443 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:21.444 -08 000000104 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:22:21.445 -08 000000058 INF: Y Motor: Unshifted Position: 5882264
17-02-28 20:22:21.495 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:21.507 -08 000000105 INF: FPGA: Recv TDIBB
17-02-28 20:22:21.507 -08 000000104 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:21.508 -08 000000104 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:22:21.509 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:21.510 -08 000000104 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:22:21.510 -08 000000104 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:22:21.510 -08 000000104 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:22:21.569 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:21.569 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:21.571 -08 000000104 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:22:21.571 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:21.573 -08 000000104 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:22:21.573 -08 000000104 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:22:21.573 -08 000000104 INF: Z Motor: Arming to move to -0.1140 mm
17-02-28 20:22:21.573 -08 000000104 INF: FPGA: Xmit ZYT 6435826 4\n
17-02-28 20:22:21.621 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:21.631 -08 000000075 INF: FPGA: Recv ZYT 
17-02-28 20:22:21.631 -08 000000104 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382264 enc / 63.823 mm / ) = 6435826 enc / 64.358 mm
17-02-28 20:22:21.631 -08 000000104 INF: FPGA: Xmit ZARM 29880\n
17-02-28 20:22:21.633 -08 000000077 INF: X Motor: Xmit PR ER\n
17-02-28 20:22:21.692 -08 000000050 INF: FPGA: Recv ZARM
17-02-28 20:22:21.692 -08 000000104 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.9615 ms
17-02-28 20:22:21.692 -08 000000104 INF: Z Motor: ArmAbsStepped took 118.9167 ms
17-02-28 20:22:21.692 -08 000000104 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:21.693 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:22:21.694 -08 000000077 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:22:21.694 -08 000000077 INF: X Motor: Moved to 71.3779 after 499 ms
17-02-28 20:22:21.694 -08 000000077 INF: ======================================
17-02-28 20:22:21.695 -08 000000104 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:22:21.695 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:22:21.697 -08 000000104 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:22:21.697 -08 000000104 INF: ===================TDI Scan Setup===================
17-02-28 20:22:21.698 -08 000000104 INF: ======================================
17-02-28 20:22:21.759 -08 000000058 INF: Y Motor: Unshifted Position: 5955827
17-02-28 20:22:21.759 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:21.759 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:21.820 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:22:21.820 -08 000000058 INF: Y Motor: Moved to 64.5583 after 498 ms
17-02-28 20:22:21.820 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:21.882 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:22:21.882 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:21.882 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:21.944 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:22:21.944 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:21.944 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:21.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:21.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 2 of 5 seconds left===================
17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:22.006 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:22.069 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:22.132 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:22:22.132 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:22.132 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:22.194 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:22:22.194 -08 000000058 INF: ======================================
17-02-28 20:22:22.195 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:22:22.196 -08 000000037 INF: ======================================
17-02-28 20:22:22.389 -08 000000036 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:22:22.389 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:22:22.390 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:22.405 -08 000000036 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:22.407 -08 000000036 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:22.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:22.957 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Delay 1 of 5 seconds left===================
17-02-28 20:22:23.464 -08 000000036 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:22:23.464 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:22:23.464 -08 000000036 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:23.479 -08 000000036 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:23.481 -08 000000036 INF: ===================Camera Arm TDI===================
17-02-28 20:22:23.482 -08 000000036 INF: ======================================
17-02-28 20:22:23.483 -08 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:23.484 -08 000000023 INF: ======================================
17-02-28 20:22:23.485 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:23.486 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:23.486 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:22:23.486 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:22:23.567 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:23.567 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:22:23.627 -08 000000069 INF: FPGA: Recv ZFREQCL
17-02-28 20:22:23.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:22:23.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:23.627 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:23.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:23.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:23.669 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:22:23.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:23.691 -08 000000089 INF: FPGA: Recv TDIYERD 6455827
17-02-28 20:22:23.691 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455827 counts (64.558 mm)
17-02-28 20:22:23.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:23.692 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:23.692 -08 000000023 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:23.692 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:22:23.693 -08 000000039 INF: ======================================
17-02-28 20:22:23.693 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:23.694 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:22:23.694 -08 000000023 INF: FPGA: Xmit TDIYPOS 6344901\n
17-02-28 20:22:23.753 -08 000000109 INF: FPGA: Recv TDIYPOS
17-02-28 20:22:23.753 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:23.754 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:22:23.755 -08 000000023 INF: FPGA: Xmit TDIYARM3 139264 6435826 1 1\n
17-02-28 20:22:23.768 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:22:23.814 -08 000000095 INF: FPGA: Recv TDIYARM3
17-02-28 20:22:23.814 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:23.815 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:22:23.815 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:22:23.815 -08 000000023 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:23.816 -08 000000023 INF: ======================================
17-02-28 20:22:23.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:23.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:23.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:23.818 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:23.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:23.820 -08 000000010 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:22:23.820 -08 000000052 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:22:23.820 -08 000000010 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:22:23.820 -08 000000010 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:22:23.820 -08 000000010 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:22:23.820 -08 000000052 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:22:23.820 -08 000000052 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:22:23.820 -08 000000052 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:22:23.820 -08 000000010 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:22:23.823 -08 000000052 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:22:23.915 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:22:24.004 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11904 (0x03)\r\n(0xFF)
17-02-28 20:22:24.004 -08 000000018 INF: Current Position of Pump is: 11904
17-02-28 20:22:24.004 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7), Dispensing port PortC===================
17-02-28 20:22:24.104 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11904R\r
17-02-28 20:22:24.188 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:22:24.188 -08 000000010 INF: Excitation Filter 2: Moved -107 steps in 367.7229 ms
17-02-28 20:22:24.188 -08 000000010 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.8298 ms
17-02-28 20:22:24.188 -08 000000010 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8989 ms
17-02-28 20:22:24.188 -08 000000010 INF: ======================================
17-02-28 20:22:24.189 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:24.250 -08 000000073 INF: FPGA: Recv EX1MV
17-02-28 20:22:24.250 -08 000000052 INF: Excitation Filter 1: Moved -107 steps in 429.6603 ms
17-02-28 20:22:24.250 -08 000000052 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.7702 ms
17-02-28 20:22:24.250 -08 000000052 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.8451 ms
17-02-28 20:22:24.250 -08 000000052 INF: ======================================
17-02-28 20:22:24.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:24.252 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:24.253 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:22:24.253 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:24.253 -08 000000066 INF: ===================FPGA Z Wait===================
17-02-28 20:22:24.253 -08 000000037 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:24.253 -08 000000066 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:22:24.253 -08 000000037 INF: Y Motor: Moving to 14.9099 mm @6.500 mm/sec, started at 64.5583 mm
17-02-28 20:22:24.254 -08 000000037 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:24.254 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:24.254 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:22:24.254 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:22:24.255 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:22:24.255 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:22:24.255 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:22:24.256 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:24.256 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:24.257 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:24.257 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:24.289 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:24.315 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:24.316 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:22:24.316 -08 000000037 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:24.316 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:24.378 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:22:24.378 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:24.406 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:24.406 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:24.407 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:24.407 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Set target position to 990993 encoder counts
17-02-28 20:22:24.439 -08 000000037 INF: Y Motor: Xmit s r0xca 990993\r
17-02-28 20:22:24.504 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:22:24.504 -08 000000037 INF: Y Motor: Start the move command
17-02-28 20:22:24.504 -08 000000037 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:24.556 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:24.556 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:24.557 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:24.557 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:24.565 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:24.568 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:22:24.568 -08 000000037 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:22:24.568 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:24.625 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:22:24.625 -08 000000066 INF: ======================================
17-02-28 20:22:24.626 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:24.691 -08 000000037 INF: Y Motor: Unshifted Position: 5894625
17-02-28 20:22:24.706 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:24.706 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:24.706 -08 000000089 INF: ===================Camera #2 Frame #4===================
17-02-28 20:22:24.707 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:24.707 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:24.707 -08 000000035 INF: ===================Camera #0 Frame #4===================
17-02-28 20:22:24.741 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:24.867 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:24.870 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:22:24.870 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:22:24.870 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:22:24.870 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:22:24.870 -08 000000035 INF: ===================Camera #0 Frame #10===================
17-02-28 20:22:24.870 -08 000000089 INF: ===================Camera #2 Frame #10===================
17-02-28 20:22:24.876 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:24.940 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:25.001 -08 000000037 INF: Y Motor: Unshifted Position: 5690312
17-02-28 20:22:25.040 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:22:25.040 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:22:25.040 -08 000000035 INF: ===================Camera #0 Frame #17===================
17-02-28 20:22:25.041 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:22:25.041 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:22:25.041 -08 000000089 INF: ===================Camera #2 Frame #17===================
17-02-28 20:22:25.051 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:25.177 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:25.190 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:25.213 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:22:25.213 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:22:25.213 -08 000000035 INF: ===================Camera #0 Frame #23===================
17-02-28 20:22:25.215 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:22:25.215 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:22:25.215 -08 000000089 INF: ===================Camera #2 Frame #23===================
17-02-28 20:22:25.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:25.315 -08 000000037 INF: Y Motor: Unshifted Position: 5487512
17-02-28 20:22:25.365 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:25.381 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:22:25.381 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:22:25.381 -08 000000035 INF: ===================Camera #0 Frame #29===================
17-02-28 20:22:25.384 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:22:25.384 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:22:25.384 -08 000000089 INF: ===================Camera #2 Frame #29===================
17-02-28 20:22:25.489 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:25.502 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:25.549 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:22:25.549 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:22:25.549 -08 000000035 INF: ===================Camera #0 Frame #35===================
17-02-28 20:22:25.553 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:22:25.553 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:22:25.553 -08 000000089 INF: ===================Camera #2 Frame #36===================
17-02-28 20:22:25.563 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:25.628 -08 000000037 INF: Y Motor: Unshifted Position: 5285144
17-02-28 20:22:25.678 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:25.717 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:22:25.717 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:22:25.717 -08 000000035 INF: ===================Camera #0 Frame #42===================
17-02-28 20:22:25.726 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:22:25.726 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:22:25.726 -08 000000089 INF: ===================Camera #2 Frame #42===================
17-02-28 20:22:25.802 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:25.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:25.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:25.888 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:22:25.888 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:22:25.888 -08 000000035 INF: ===================Camera #0 Frame #48===================
17-02-28 20:22:25.895 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:22:25.895 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:22:25.895 -08 000000089 INF: ===================Camera #2 Frame #48===================
17-02-28 20:22:25.937 -08 000000037 INF: Y Motor: Unshifted Position: 5082987
17-02-28 20:22:25.987 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.056 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:22:26.056 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:22:26.056 -08 000000035 INF: ===================Camera #0 Frame #54===================
17-02-28 20:22:26.064 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:22:26.064 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:22:26.064 -08 000000089 INF: ===================Camera #2 Frame #54===================
17-02-28 20:22:26.114 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:26.186 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:26.186 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Pumping Reagent HCM (7)===================
17-02-28 20:22:26.186 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:22:26.224 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:22:26.224 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:22:26.224 -08 000000035 INF: ===================Camera #0 Frame #60===================
17-02-28 20:22:26.234 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:22:26.234 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:22:26.234 -08 000000089 INF: ===================Camera #2 Frame #61===================
17-02-28 20:22:26.249 -08 000000037 INF: Y Motor: Unshifted Position: 4879974
17-02-28 20:22:26.300 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.394 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:22:26.394 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:22:26.394 -08 000000035 INF: ===================Camera #0 Frame #67===================
17-02-28 20:22:26.408 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:22:26.408 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:22:26.408 -08 000000089 INF: ===================Camera #2 Frame #67===================
17-02-28 20:22:26.428 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.564 -08 000000037 INF: Y Motor: Unshifted Position: 4676521
17-02-28 20:22:26.567 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:22:26.567 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:22:26.567 -08 000000035 INF: ===================Camera #0 Frame #73===================
17-02-28 20:22:26.579 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:22:26.579 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:22:26.579 -08 000000089 INF: ===================Camera #2 Frame #73===================
17-02-28 20:22:26.614 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.687 -08 000000046 INF: RunCopyService queue size at 2/28/2017 8:22:26 PM is 2
17-02-28 20:22:26.737 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:22:26.737 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:22:26.737 -08 000000035 INF: ===================Camera #0 Frame #79===================
17-02-28 20:22:26.739 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.750 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:22:26.750 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:22:26.759 -08 000000089 INF: ===================Camera #2 Frame #80===================
17-02-28 20:22:26.875 -08 000000037 INF: Y Motor: Unshifted Position: 4473492
17-02-28 20:22:26.906 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:22:26.906 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:22:26.906 -08 000000035 INF: ===================Camera #0 Frame #85===================
17-02-28 20:22:26.925 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:26.933 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:22:26.933 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:22:26.933 -08 000000089 INF: ===================Camera #2 Frame #86===================
17-02-28 20:22:27.051 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:27.076 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:22:27.076 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:22:27.076 -08 000000035 INF: ===================Camera #0 Frame #92===================
17-02-28 20:22:27.104 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:22:27.104 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:22:27.104 -08 000000089 INF: ===================Camera #2 Frame #93===================
17-02-28 20:22:27.187 -08 000000037 INF: Y Motor: Unshifted Position: 4270697
17-02-28 20:22:27.237 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:27.249 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:22:27.249 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:22:27.249 -08 000000035 INF: ===================Camera #0 Frame #98===================
17-02-28 20:22:27.278 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:22:27.278 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:22:27.278 -08 000000089 INF: ===================Camera #2 Frame #99===================
17-02-28 20:22:27.287 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:22:27.363 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:27.374 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:27.419 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:22:27.419 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:22:27.419 -08 000000035 INF: ===================Camera #0 Frame #104===================
17-02-28 20:22:27.449 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:22:27.449 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:22:27.449 -08 000000089 INF: ===================Camera #2 Frame #105===================
17-02-28 20:22:27.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:27.498 -08 000000037 INF: Y Motor: Unshifted Position: 4068328
17-02-28 20:22:27.548 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:27.561 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:27.589 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:22:27.589 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:22:27.589 -08 000000035 INF: ===================Camera #0 Frame #111===================
17-02-28 20:22:27.620 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:22:27.620 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:22:27.620 -08 000000089 INF: ===================Camera #2 Frame #112===================
17-02-28 20:22:27.674 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:27.762 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:22:27.762 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:22:27.762 -08 000000035 INF: ===================Camera #0 Frame #117===================
17-02-28 20:22:27.794 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:22:27.794 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:22:27.794 -08 000000089 INF: ===================Camera #2 Frame #118===================
17-02-28 20:22:27.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:27.812 -08 000000037 INF: Y Motor: Unshifted Position: 3865960
17-02-28 20:22:27.862 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:27.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:27.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:27.874 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Closing shutoff valve===================
17-02-28 20:22:27.931 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:22:27.931 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:22:27.931 -08 000000035 INF: ===================Camera #0 Frame #123===================
17-02-28 20:22:27.963 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:22:27.963 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:22:27.963 -08 000000089 INF: ===================Camera #2 Frame #124===================
17-02-28 20:22:27.985 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.099 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:22:28.099 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:22:28.099 -08 000000035 INF: ===================Camera #0 Frame #129===================
17-02-28 20:22:28.124 -08 000000037 INF: Y Motor: Unshifted Position: 3663156
17-02-28 20:22:28.132 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:22:28.132 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:22:28.132 -08 000000089 INF: ===================Camera #2 Frame #131===================
17-02-28 20:22:28.174 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.268 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:22:28.268 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:22:28.268 -08 000000035 INF: ===================Camera #0 Frame #136===================
17-02-28 20:22:28.299 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.304 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:22:28.304 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:22:28.304 -08 000000089 INF: ===================Camera #2 Frame #137===================
17-02-28 20:22:28.435 -08 000000037 INF: Y Motor: Unshifted Position: 3459066
17-02-28 20:22:28.440 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:22:28.440 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:22:28.440 -08 000000035 INF: ===================Camera #0 Frame #142===================
17-02-28 20:22:28.475 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:22:28.475 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:22:28.475 -08 000000089 INF: ===================Camera #2 Frame #143===================
17-02-28 20:22:28.485 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.610 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:22:28.610 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:22:28.610 -08 000000035 INF: ===================Camera #0 Frame #148===================
17-02-28 20:22:28.611 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:28.621 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:28.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:28.622 -08 000000018 INF: WaitCommand(10000) start
17-02-28 20:22:28.622 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 10 of 10 seconds left===================
17-02-28 20:22:28.645 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:22:28.645 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:22:28.645 -08 000000089 INF: ===================Camera #2 Frame #149===================
17-02-28 20:22:28.748 -08 000000037 INF: Y Motor: Unshifted Position: 3256697
17-02-28 20:22:28.779 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:22:28.779 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:22:28.779 -08 000000035 INF: ===================Camera #0 Frame #154===================
17-02-28 20:22:28.798 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.816 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:22:28.816 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:22:28.816 -08 000000089 INF: ===================Camera #2 Frame #156===================
17-02-28 20:22:28.922 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:28.949 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:22:28.949 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:22:28.949 -08 000000035 INF: ===================Camera #0 Frame #161===================
17-02-28 20:22:28.990 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:22:28.990 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:22:28.990 -08 000000089 INF: ===================Camera #2 Frame #162===================
17-02-28 20:22:29.058 -08 000000037 INF: Y Motor: Unshifted Position: 3054334
17-02-28 20:22:29.108 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:29.122 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:22:29.122 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:22:29.122 -08 000000035 INF: ===================Camera #0 Frame #167===================
17-02-28 20:22:29.161 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:22:29.161 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:22:29.161 -08 000000089 INF: ===================Camera #2 Frame #168===================
17-02-28 20:22:29.234 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:29.292 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:22:29.292 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:22:29.292 -08 000000035 INF: ===================Camera #0 Frame #173===================
17-02-28 20:22:29.332 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:22:29.332 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:22:29.332 -08 000000089 INF: ===================Camera #2 Frame #175===================
17-02-28 20:22:29.372 -08 000000037 INF: Y Motor: Unshifted Position: 2851539
17-02-28 20:22:29.422 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:29.462 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:22:29.462 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:22:29.462 -08 000000035 INF: ===================Camera #0 Frame #179===================
17-02-28 20:22:29.507 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:22:29.507 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:22:29.507 -08 000000089 INF: ===================Camera #2 Frame #181===================
17-02-28 20:22:29.545 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:29.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:29.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 9 of 10 seconds left===================
17-02-28 20:22:29.632 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:22:29.632 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:22:29.632 -08 000000035 INF: ===================Camera #0 Frame #186===================
17-02-28 20:22:29.678 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:22:29.678 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:22:29.678 -08 000000089 INF: ===================Camera #2 Frame #187===================
17-02-28 20:22:29.683 -08 000000037 INF: Y Motor: Unshifted Position: 2647439
17-02-28 20:22:29.733 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:29.805 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:22:29.805 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:22:29.805 -08 000000035 INF: ===================Camera #0 Frame #192===================
17-02-28 20:22:29.848 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:22:29.848 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:22:29.848 -08 000000089 INF: ===================Camera #2 Frame #194===================
17-02-28 20:22:29.856 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:29.975 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:22:29.975 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:22:29.975 -08 000000035 INF: ===================Camera #0 Frame #198===================
17-02-28 20:22:29.994 -08 000000037 INF: Y Motor: Unshifted Position: 2445076
17-02-28 20:22:30.023 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:22:30.023 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:22:30.023 -08 000000089 INF: ===================Camera #2 Frame #200===================
17-02-28 20:22:30.044 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:30.145 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:22:30.145 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:22:30.145 -08 000000035 INF: ===================Camera #0 Frame #205===================
17-02-28 20:22:30.173 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:30.194 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:22:30.194 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:22:30.194 -08 000000089 INF: ===================Camera #2 Frame #206===================
17-02-28 20:22:30.308 -08 000000037 INF: Y Motor: Unshifted Position: 2240976
17-02-28 20:22:30.318 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:22:30.318 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:22:30.318 -08 000000035 INF: ===================Camera #0 Frame #211===================
17-02-28 20:22:30.358 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:30.365 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:22:30.365 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:22:30.365 -08 000000089 INF: ===================Camera #2 Frame #213===================
17-02-28 20:22:30.482 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:30.488 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:22:30.488 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:22:30.488 -08 000000035 INF: ===================Camera #0 Frame #217===================
17-02-28 20:22:30.539 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:22:30.539 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:22:30.539 -08 000000089 INF: ===================Camera #2 Frame #219===================
17-02-28 20:22:30.620 -08 000000037 INF: Y Motor: Unshifted Position: 2039911
17-02-28 20:22:30.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:30.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 8 of 10 seconds left===================
17-02-28 20:22:30.658 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:22:30.658 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:22:30.658 -08 000000035 INF: ===================Camera #0 Frame #224===================
17-02-28 20:22:30.670 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:30.710 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:22:30.710 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:22:30.710 -08 000000089 INF: ===================Camera #2 Frame #225===================
17-02-28 20:22:30.795 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:30.831 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:22:30.831 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:22:30.831 -08 000000035 INF: ===================Camera #0 Frame #230===================
17-02-28 20:22:30.881 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:22:30.881 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:22:30.881 -08 000000089 INF: ===================Camera #2 Frame #232===================
17-02-28 20:22:30.931 -08 000000037 INF: Y Motor: Unshifted Position: 1835808
17-02-28 20:22:30.981 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.001 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:22:31.001 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:22:31.001 -08 000000035 INF: ===================Camera #0 Frame #236===================
17-02-28 20:22:31.055 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:22:31.055 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:22:31.055 -08 000000089 INF: ===================Camera #2 Frame #238===================
17-02-28 20:22:31.104 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.171 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:22:31.171 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:22:31.171 -08 000000035 INF: ===================Camera #0 Frame #242===================
17-02-28 20:22:31.226 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:22:31.226 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:22:31.226 -08 000000089 INF: ===================Camera #2 Frame #244===================
17-02-28 20:22:31.243 -08 000000037 INF: Y Motor: Unshifted Position: 1632787
17-02-28 20:22:31.293 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.341 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:22:31.341 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:22:31.341 -08 000000035 INF: ===================Camera #0 Frame #249===================
17-02-28 20:22:31.397 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:22:31.397 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:22:31.397 -08 000000089 INF: ===================Camera #2 Frame #251===================
17-02-28 20:22:31.416 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.514 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:22:31.514 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:22:31.514 -08 000000035 INF: ===================Camera #0 Frame #255===================
17-02-28 20:22:31.554 -08 000000037 INF: Y Motor: Unshifted Position: 1429336
17-02-28 20:22:31.571 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:22:31.571 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:22:31.571 -08 000000089 INF: ===================Camera #2 Frame #257===================
17-02-28 20:22:31.604 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:31.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 7 of 10 seconds left===================
17-02-28 20:22:31.684 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:22:31.684 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:22:31.684 -08 000000035 INF: ===================Camera #0 Frame #261===================
17-02-28 20:22:31.730 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.742 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:22:31.742 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:22:31.742 -08 000000089 INF: ===================Camera #2 Frame #263===================
17-02-28 20:22:31.854 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:22:31.854 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:22:31.854 -08 000000035 INF: ===================Camera #0 Frame #268===================
17-02-28 20:22:31.868 -08 000000037 INF: Y Motor: Unshifted Position: 1228258
17-02-28 20:22:31.913 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:22:31.913 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:22:31.913 -08 000000089 INF: ===================Camera #2 Frame #270===================
17-02-28 20:22:31.918 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:31.989 -08 000000066 INF: FPGA: Recv TDIYWAIT
17-02-28 20:22:31.989 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:31.991 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:22:31.992 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:22:31.992 -08 000000038 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:22:31.992 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:22:31.992 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:22:31.992 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:22:31.992 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:22:31.992 -08 000000038 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:22:31.992 -08 000000038 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:22:31.992 -08 000000038 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:22:31.993 -08 000000038 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:22:32.027 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:22:32.027 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:22:32.027 -08 000000035 INF: ===================Camera #0 Frame #272===================
17-02-28 20:22:32.040 -08 000000035 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:22:32.041 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:32.041 -08 000000035 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:32.179 -08 000000037 INF: Y Motor: Unshifted Position: 1024598
17-02-28 20:22:32.204 -08 000000035 INF: Camera #0 ReleaseBuffer
17-02-28 20:22:32.204 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:22:32.204 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:22:32.204 -08 000000089 INF: ===================Camera #2 Frame #272===================
17-02-28 20:22:32.204 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:22:32.211 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:22:32.212 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:32.229 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:32.235 -08 000000035 INF: ======================================
17-02-28 20:22:32.364 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:22:32.364 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:22:32.364 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 371.9827 ms
17-02-28 20:22:32.364 -08 000000038 INF: Excitation Filter 2: Moved 107 steps in 371.8477 ms
17-02-28 20:22:32.364 -08 000000038 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.0191 ms
17-02-28 20:22:32.364 -08 000000038 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.1291 ms
17-02-28 20:22:32.364 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0834 ms
17-02-28 20:22:32.364 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.497 ms
17-02-28 20:22:32.364 -08 000000038 INF: ======================================
17-02-28 20:22:32.364 -08 000000077 INF: ======================================
17-02-28 20:22:32.366 -08 000000037 INF: Y Motor: Unshifted Position: 990993
17-02-28 20:22:32.366 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:32.366 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:32.366 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:32.367 -08 000000085 INF: ======================================
17-02-28 20:22:32.410 -08 000000089 INF: Camera #2 ReleaseBuffer
17-02-28 20:22:32.410 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:22:32.427 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:22:32.427 -08 000000037 INF: Y Motor: Moved to 14.9099 after 7858 ms
17-02-28 20:22:32.427 -08 000000037 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:32.445 -08 000000089 INF: ======================================
17-02-28 20:22:32.446 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:22:32.447 -08 000000030 INF: ======================================
17-02-28 20:22:32.492 -08 000000037 INF: Y Motor: Recv v 4097\r
17-02-28 20:22:32.492 -08 000000037 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:32.492 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:32.554 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:22:32.554 -08 000000037 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:32.554 -08 000000037 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: Recv v 134217728\r
17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:32.616 -08 000000037 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:32.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:32.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:32.678 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:32.739 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:22:32.739 -08 000000037 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:32.739 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:32.804 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:22:32.804 -08 000000037 INF: ======================================
17-02-28 20:22:32.805 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:32.806 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:32.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:32.807 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:22:32.863 -08 000000095 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:22:32.863 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:32.925 -08 000000101 INF: FPGA: Recv TDIYERD 1490994
17-02-28 20:22:32.925 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:22:32.987 -08 000000045 INF: FPGA: Recv ZADCR 34586
17-02-28 20:22:32.987 -08 000000042 INF: At scan end Y pos = 14.910 and Z pos = -0.132. Y moved -48.539 mm
17-02-28 20:22:32.987 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:22:33.051 -08 000000059 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:22:33.051 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:22:33.051 -08 000000042 INF: TDIScan finished after 12074.4069 ms
17-02-28 20:22:33.051 -08 000000042 INF: Image[0]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:22:33.051 -08 000000042 INF: Image[2]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:22:33.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.084 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.696 um
17-02-28 20:22:33.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.085 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:22:33.113 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:22:33.113 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.114 -08 000000052 INF: ===================Dither Clean Up Command===================
17-02-28 20:22:33.114 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:22:33.114 -08 000000109 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:22:33.114 -08 000000038 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:22:33.114 -08 000000109 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:33.115 -08 000000109 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:33.115 -08 000000033 INF: ======================================
17-02-28 20:22:33.115 -08 000000038 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:22:33.115 -08 000000038 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:22:33.115 -08 000000101 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:22:33.115 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:33.116 -08 000000101 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:22:33.118 -08 000000036 INF: ===================LFT:Extracting coords===================
17-02-28 20:22:33.144 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:33.145 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:22:33.145 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.146 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.146 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.146 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.146 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:33.146 -08 000000104 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:33.146 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:33.146 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:33.175 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:33.175 -08 000000072 INF: FPGA: Recv ZSEL 
17-02-28 20:22:33.175 -08 000000101 INF: FPGA: Xmit ZDACW 40366\n
17-02-28 20:22:33.175 -08 000000038 INF: ======================================
17-02-28 20:22:33.176 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:22:33.176 -08 000000109 INF: ======================================
17-02-28 20:22:33.220 -08 000000069 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:33.220 -08 000000104 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:33.220 -08 000000058 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:33.221 -08 000000089 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:33.236 -08 000000077 INF: FPGA: Recv ZDACW 
17-02-28 20:22:33.236 -08 000000101 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:22:33.237 -08 000000101 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:22:33.301 -08 000000108 INF: FPGA: Recv TDIBB
17-02-28 20:22:33.301 -08 000000101 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:22:33.302 -08 000000101 INF: ======================================
17-02-28 20:22:33.371 -08 000000069 INF: LFT found best fwhm score 2.000168 in 151 ms
17-02-28 20:22:33.371 -08 000000069 INF: LFT found good score at index 5353 with fwhm value 2.000168. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T
17-02-28 20:22:33.371 -08 000000104 INF: LFT found best fwhm score 2.000268 in 151 ms
17-02-28 20:22:33.371 -08 000000058 INF: LFT found best fwhm score 2.104398 in 151 ms
17-02-28 20:22:33.372 -08 000000104 INF: LFT found good score at index 3525 with fwhm value 2.000268. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T
17-02-28 20:22:33.372 -08 000000058 INF: LFT found good score at index 2517 with fwhm value 2.104398. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T
17-02-28 20:22:33.372 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.372 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.372 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.372 -08 000000069 INF: ======================================
17-02-28 20:22:33.372 -08 000000104 INF: ======================================
17-02-28 20:22:33.372 -08 000000089 INF: LFT found best fwhm score 2.000015 in 151 ms
17-02-28 20:22:33.372 -08 000000089 INF: LFT found good score at index 6265 with fwhm value 2.000015. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:2,T
17-02-28 20:22:33.372 -08 000000058 INF: ======================================
17-02-28 20:22:33.372 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:22:33.373 -08 000000089 INF: ======================================
17-02-28 20:22:33.373 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:33.374 -08 000000036 INF: LFT weighted average best Z for top surface is at -0.156mm FC:B, C:3,L:2,T
17-02-28 20:22:33.374 -08 000000036 INF: ======================================
17-02-28 20:22:33.376 -08 000000052 INF: ======================================
17-02-28 20:22:33.376 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:22:33.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:22:33.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:22:33.379 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:22:33.379 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left, Waiting for image analysis===================
17-02-28 20:22:33.380 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 6 of 10 seconds left===================
17-02-28 20:22:33.380 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:22:33.380 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 1 - X = 71.39664 Y = 39.76308===================
17-02-28 20:22:33.403 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:22:33.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:33.403 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:22:33.403 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:33.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:22:33.404 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:22:33.404 -08 000000042 INF: Transformed XStagePosition from 72.50464 mm to 72.4811786711216 mm.
17-02-28 20:22:33.416 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5582643555254 mm.
17-02-28 20:22:33.416 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3582643555254 mm.
17-02-28 20:22:33.416 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4490143555254 mm.
17-02-28 20:22:33.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:22:33.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:33.425 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -154.0 um, section = B_1
17-02-28 20:22:33.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:33.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:33.444 -08 000000105 INF: ===================MoveEmissionFilters===================
17-02-28 20:22:33.445 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:33.446 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:22:33.446 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":2,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF215","HCSMMF234","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.446 -08 000000075 INF: ===================Move X,Y, Parallel===================
17-02-28 20:22:33.492 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:33.492 -08 000000077 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:33.492 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:22:33.492 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:22:33.493 -08 000000077 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:33.493 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:33.495 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:33.497 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:33.499 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:22:33.499 -08 000000104 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:22:33.500 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:33.504 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:22:33.507 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:33.507 -08 000000072 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:22:33.508 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:22:33.508 -08 000000072 INF: ======================================
17-02-28 20:22:33.508 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:33.509 -08 000000064 INF: ======================================
17-02-28 20:22:33.510 -08 000000082 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:33.511 -08 000000082 INF: Y Motor: Moving to 64.5583 mm @25.000 mm/sec, started at 14.9099 mm
17-02-28 20:22:33.511 -08 000000082 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:33.511 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:33.518 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:22:33.519 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:33.519 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:22:33.520 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:33.520 -08 000000060 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:22:33.522 -08 000000091 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:22:33.523 -08 000000099 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:22:33.523 -08 000000099 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:22:33.523 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:22:33.523 -08 000000091 INF: ======================================
17-02-28 20:22:33.523 -08 000000099 INF: ======================================
17-02-28 20:22:33.523 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:22:33.524 -08 000000036 INF: ======================================
17-02-28 20:22:33.524 -08 000000051 INF: ======================================
17-02-28 20:22:33.524 -08 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:33.525 -08 000000099 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:22:33.525 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:22:33.526 -08 000000099 INF: ======================================
17-02-28 20:22:33.526 -08 000000077 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:33.526 -08 000000047 INF: ======================================
17-02-28 20:22:33.526 -08 000000051 INF: ======================================
17-02-28 20:22:33.527 -08 000000089 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:33.527 -08 000000077 INF: ======================================
17-02-28 20:22:33.528 -08 000000089 INF: ======================================
17-02-28 20:22:33.539 -08 000000091 INF: ===================Camera Arm TDI===================
17-02-28 20:22:33.540 -08 000000091 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:33.541 -08 000000091 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:33.566 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:33.568 -08 000000076 INF: ======================================
17-02-28 20:22:33.569 -08 000000105 INF: ======================================
17-02-28 20:22:33.578 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:22:33.578 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:22:33.604 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":2,"Tile":1102,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF239","HCSMMF244","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.615 -08 000000062 INF: FPGA: Recv ZSEL 
17-02-28 20:22:33.616 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:33.616 -08 000000060 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:22:33.621 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":2,"Tile":1106,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF210","HCSMMF214","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.623 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":2,"Tile":1110,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF242","HCSMMF187","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:33.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 5 of 10 seconds left===================
17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Moving to 72.4812 mm @15.000 mm/sec, started at 71.3779 mm
17-02-28 20:22:33.628 -08 000000074 INF: X Motor: Xmit MA 5522\n
17-02-28 20:22:33.633 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":2,"Tile":1107,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF246","HCSMMF238","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.633 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":2,"Tile":1113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF264","HCSMMF256","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.634 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":2,"Tile":1111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF192","HCSMMF287","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.635 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":2,"Tile":1105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF250","HCSMMF269","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.636 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":2,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF267","HCSMMF219","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.637 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":2,"Tile":1116,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF189","HCSMMF224","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.638 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":2,"Tile":1114,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF194","HCSMMF261","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.639 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":2,"Tile":1103,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF206","HCSMMF218","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.640 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":2,"Tile":1109,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF200","HCSMMF181","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.641 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":2,"Tile":1112,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF217","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.642 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":2,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF266","HCSMMF259","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.643 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":2,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF248","HCSMMF254","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.643 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":2,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF232","HCSMMF229","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.644 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":2,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF240","HCSMMF272","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.645 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":2,"Tile":1121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF230","HCSMMF278","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.646 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:22:33.646 -08 000000082 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:33.646 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:33.646 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":2,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF265","HCSMMF198","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.647 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":2,"Tile":1120,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF226","HCSMMF196","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.648 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":2,"Tile":1126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF283","HCSMMF209","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.649 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":2,"Tile":1118,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF222","HCSMMF233","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.650 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":2,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF255","HCSMMF268","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.651 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":2,"Tile":1124,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF247","HCSMMF204","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.652 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":2,"Tile":1119,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF231","HCSMMF177","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.653 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":2,"Tile":1125,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF193","HCSMMF223","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.656 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":2,"Tile":1128,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF199","HCSMMF236","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:33.657 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:33.664 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:22:33.677 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:22:33.678 -08 000000060 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:33.679 -08 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:22:33.679 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:33.681 -08 000000060 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:22:33.681 -08 000000060 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:22:33.681 -08 000000060 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:22:33.692 -08 000000074 INF: X Motor: Recv MA 5522\r\n>
17-02-28 20:22:33.692 -08 000000074 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:22:33.707 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:22:33.707 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:33.736 -08 000000078 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:33.736 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:33.738 -08 000000060 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:22:33.738 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:33.740 -08 000000060 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:22:33.740 -08 000000060 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:22:33.740 -08 000000060 INF: Z Motor: Arming to move to -0.1140 mm
17-02-28 20:22:33.740 -08 000000060 INF: FPGA: Xmit ZYT 6435826 4\n
17-02-28 20:22:33.748 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:33.748 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Set target position to 5955826 encoder counts
17-02-28 20:22:33.771 -08 000000082 INF: Y Motor: Xmit s r0xca 5955826\r
17-02-28 20:22:33.785 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:33.791 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:22:33.800 -08 000000098 INF: FPGA: Recv ZYT 
17-02-28 20:22:33.800 -08 000000060 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490993 enc / 14.910 mm / ) = 6435826 enc / 64.358 mm
17-02-28 20:22:33.800 -08 000000060 INF: FPGA: Xmit ZARM 29880\n
17-02-28 20:22:33.833 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:22:33.833 -08 000000082 INF: Y Motor: Start the move command
17-02-28 20:22:33.833 -08 000000082 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:33.861 -08 000000036 INF: FPGA: Recv ZARM
17-02-28 20:22:33.861 -08 000000060 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.9288 ms
17-02-28 20:22:33.861 -08 000000060 INF: Z Motor: ArmAbsStepped took 120.7449 ms
17-02-28 20:22:33.861 -08 000000060 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:33.863 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:22:33.864 -08 000000060 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:22:33.864 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:22:33.866 -08 000000060 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:22:33.866 -08 000000060 INF: ===================TDI Scan Setup===================
17-02-28 20:22:33.868 -08 000000060 INF: ======================================
17-02-28 20:22:33.888 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:33.894 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:22:33.894 -08 000000082 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:22:33.894 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:33.894 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:22:34.019 -08 000000082 INF: Y Motor: Unshifted Position: 1073787
17-02-28 20:22:34.022 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:34.028 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:22:34.069 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:34.119 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:34.141 -08 000000091 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:22:34.141 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:22:34.141 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:34.156 -08 000000091 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:34.158 -08 000000091 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:34.193 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:34.317 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:22:34.332 -08 000000082 INF: Y Motor: Unshifted Position: 1775165
17-02-28 20:22:34.378 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:22:34.378 -08 000000074 INF: X Motor: Moved to 72.4814 after 686 ms
17-02-28 20:22:34.378 -08 000000074 INF: ======================================
17-02-28 20:22:34.382 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:34.414 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:22:34.505 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:34.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:34.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 4 of 10 seconds left===================
17-02-28 20:22:34.644 -08 000000082 INF: Y Motor: Unshifted Position: 2556012
17-02-28 20:22:34.694 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:34.765 -08 000000091 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:22:34.766 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:22:34.766 -08 000000091 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:34.781 -08 000000091 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:34.783 -08 000000091 INF: ===================Camera Arm TDI===================
17-02-28 20:22:34.784 -08 000000091 INF: ======================================
17-02-28 20:22:34.785 -08 000000104 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:34.786 -08 000000104 INF: ======================================
17-02-28 20:22:34.817 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:34.956 -08 000000082 INF: Y Motor: Unshifted Position: 3335955
17-02-28 20:22:35.006 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:35.129 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:35.266 -08 000000082 INF: Y Motor: Unshifted Position: 4119362
17-02-28 20:22:35.316 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:35.442 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:35.579 -08 000000082 INF: Y Motor: Unshifted Position: 4899297
17-02-28 20:22:35.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:35.623 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 3 of 10 seconds left===================
17-02-28 20:22:35.629 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:35.755 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:35.891 -08 000000082 INF: Y Motor: Unshifted Position: 5681208
17-02-28 20:22:35.941 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:36.067 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:36.204 -08 000000082 INF: Y Motor: Unshifted Position: 5955829
17-02-28 20:22:36.204 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:36.204 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:36.265 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:22:36.265 -08 000000082 INF: Y Motor: Moved to 64.5583 after 2371 ms
17-02-28 20:22:36.265 -08 000000082 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:36.328 -08 000000082 INF: Y Motor: Recv v 4096\r
17-02-28 20:22:36.328 -08 000000082 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:36.328 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:36.392 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:22:36.392 -08 000000082 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:36.392 -08 000000082 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: Recv v 402653184\r
17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:36.453 -08 000000082 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:36.517 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:36.578 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:22:36.578 -08 000000082 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:36.578 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:36.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:36.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 2 of 10 seconds left===================
17-02-28 20:22:36.640 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:22:36.640 -08 000000082 INF: ======================================
17-02-28 20:22:36.641 -08 000000075 INF: ===================Move X,Y===================
17-02-28 20:22:36.642 -08 000000075 INF: ======================================
17-02-28 20:22:36.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:36.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:36.644 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:22:36.644 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:22:36.704 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:36.704 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:22:36.733 -08 000000038 INF: FPGA: Recv ZFREQCL
17-02-28 20:22:36.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:22:36.733 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:36.734 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:36.794 -08 000000047 INF: FPGA: Recv TDIYERD 6455828
17-02-28 20:22:36.794 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455828 counts (64.558 mm)
17-02-28 20:22:36.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:36.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:36.796 -08 000000073 INF: ===================Set YMotor gains for scans===================
17-02-28 20:22:36.796 -08 000000091 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:36.796 -08 000000073 INF: ======================================
17-02-28 20:22:36.797 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:36.797 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:22:36.798 -08 000000091 INF: FPGA: Xmit TDIYPOS 6344901\n
17-02-28 20:22:36.858 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:22:36.858 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:36.860 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:22:36.860 -08 000000091 INF: FPGA: Xmit TDIYARM3 139264 6435826 1 1\n
17-02-28 20:22:36.919 -08 000000104 INF: FPGA: Recv TDIYARM3
17-02-28 20:22:36.919 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:36.921 -08 000000091 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:36.921 -08 000000091 INF: ======================================
17-02-28 20:22:36.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:36.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:36.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:36.924 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:36.925 -08 000000082 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:22:36.925 -08 000000083 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:22:36.925 -08 000000082 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:22:36.925 -08 000000082 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:22:36.926 -08 000000082 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:22:36.926 -08 000000083 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:22:36.926 -08 000000083 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:22:36.926 -08 000000083 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:22:36.926 -08 000000082 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:22:36.927 -08 000000083 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:22:37.293 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:22:37.293 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:22:37.293 -08 000000083 INF: Excitation Filter 1: Moved -107 steps in 367.3409 ms
17-02-28 20:22:37.293 -08 000000082 INF: Excitation Filter 2: Moved -107 steps in 367.4974 ms
17-02-28 20:22:37.293 -08 000000083 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.588 ms
17-02-28 20:22:37.293 -08 000000082 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7461 ms
17-02-28 20:22:37.293 -08 000000082 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.9324 ms
17-02-28 20:22:37.293 -08 000000083 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.7187 ms
17-02-28 20:22:37.294 -08 000000082 INF: ======================================
17-02-28 20:22:37.294 -08 000000083 INF: ======================================
17-02-28 20:22:37.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:37.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:37.298 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:22:37.298 -08 000000105 INF: ===================FPGA Z Wait===================
17-02-28 20:22:37.298 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:37.298 -08 000000105 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:22:37.299 -08 000000060 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:37.299 -08 000000060 INF: Y Motor: Moving to 14.9099 mm @6.500 mm/sec, started at 64.5583 mm
17-02-28 20:22:37.299 -08 000000099 INF: ===================Camera TDI, Parallel===================
17-02-28 20:22:37.299 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:37.299 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:37.299 -08 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:22:37.300 -08 000000085 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:22:37.300 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:22:37.301 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:22:37.302 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:37.302 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:37.304 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:37.304 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:37.329 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:22:37.329 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:37.329 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:37.390 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:22:37.390 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Set target position to 990993 encoder counts
17-02-28 20:22:37.451 -08 000000060 INF: Y Motor: Xmit s r0xca 990993\r
17-02-28 20:22:37.452 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:37.452 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:37.454 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:37.454 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:37.515 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:22:37.515 -08 000000060 INF: Y Motor: Start the move command
17-02-28 20:22:37.515 -08 000000060 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:37.577 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:22:37.577 -08 000000060 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:22:37.577 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:37.602 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:37.602 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:37.604 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:37.604 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:37.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:37.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock, Delay 1 of 10 seconds left===================
17-02-28 20:22:37.667 -08 000000087 INF: FPGA: Recv ZWAIT 
17-02-28 20:22:37.667 -08 000000105 INF: ======================================
17-02-28 20:22:37.702 -08 000000060 INF: Y Motor: Unshifted Position: 5892671
17-02-28 20:22:37.752 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:37.752 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:22:37.752 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:22:37.752 -08 000000069 INF: ===================Camera #2 Frame #6===================
17-02-28 20:22:37.754 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:22:37.754 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:22:37.754 -08 000000091 INF: ===================Camera #0 Frame #6===================
17-02-28 20:22:37.877 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:37.931 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:22:37.931 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:22:37.931 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:22:37.931 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:22:37.931 -08 000000091 INF: ===================Camera #0 Frame #12===================
17-02-28 20:22:37.931 -08 000000069 INF: ===================Camera #2 Frame #12===================
17-02-28 20:22:38.014 -08 000000060 INF: Y Motor: Unshifted Position: 5689654
17-02-28 20:22:38.064 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:38.108 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 18, frameCount = 19.
17-02-28 20:22:38.108 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 19
17-02-28 20:22:38.108 -08 000000091 INF: ===================Camera #0 Frame #19===================
17-02-28 20:22:38.118 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 18, frameCount = 19.
17-02-28 20:22:38.118 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 19
17-02-28 20:22:38.118 -08 000000069 INF: ===================Camera #2 Frame #19===================
17-02-28 20:22:38.189 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:38.288 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:22:38.288 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:22:38.288 -08 000000091 INF: ===================Camera #0 Frame #25===================
17-02-28 20:22:38.300 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 25, frameCount = 26.
17-02-28 20:22:38.300 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 26
17-02-28 20:22:38.300 -08 000000069 INF: ===================Camera #2 Frame #26===================
17-02-28 20:22:38.327 -08 000000060 INF: Y Motor: Unshifted Position: 5488167
17-02-28 20:22:38.377 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:38.464 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 31, frameCount = 32.
17-02-28 20:22:38.464 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 32
17-02-28 20:22:38.464 -08 000000091 INF: ===================Camera #0 Frame #32===================
17-02-28 20:22:38.484 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 32, frameCount = 33.
17-02-28 20:22:38.484 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 33
17-02-28 20:22:38.484 -08 000000069 INF: ===================Camera #2 Frame #33===================
17-02-28 20:22:38.499 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:38.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:38.624 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:38.624 -08 000000018 INF: WaitCommand(10000) end
17-02-28 20:22:38.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:38.625 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Deblock===================
17-02-28 20:22:38.626 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle===================
17-02-28 20:22:38.627 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:22:38.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:22:38.628 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:22:38.629 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:38.639 -08 000000060 INF: Y Motor: Unshifted Position: 5285363
17-02-28 20:22:38.642 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38.
17-02-28 20:22:38.642 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:22:38.642 -08 000000091 INF: ===================Camera #0 Frame #38===================
17-02-28 20:22:38.656 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 38, frameCount = 39.
17-02-28 20:22:38.656 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 39
17-02-28 20:22:38.656 -08 000000069 INF: ===================Camera #2 Frame #39===================
17-02-28 20:22:38.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:38.669 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB1 (4)===================
17-02-28 20:22:38.669 -08 000000018 INF: Valve A1: Go to position 4
17-02-28 20:22:38.669 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:22:38.689 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 7\r
17-02-28 20:22:38.730 -08 000000018 INF: Valve A1: 38.763 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:22:38.730 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 7 to 4
17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC4\r
17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:22:38.730 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:22:38.811 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:38.813 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 44, frameCount = 45.
17-02-28 20:22:38.813 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 45
17-02-28 20:22:38.813 -08 000000091 INF: ===================Camera #0 Frame #45===================
17-02-28 20:22:38.825 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 44, frameCount = 45.
17-02-28 20:22:38.825 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 45
17-02-28 20:22:38.825 -08 000000069 INF: ===================Camera #2 Frame #45===================
17-02-28 20:22:38.951 -08 000000060 INF: Y Motor: Unshifted Position: 5082337
17-02-28 20:22:38.994 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:22:38.994 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:22:38.994 -08 000000091 INF: ===================Camera #0 Frame #51===================
17-02-28 20:22:39.001 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.003 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 51, frameCount = 52.
17-02-28 20:22:39.003 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 52
17-02-28 20:22:39.003 -08 000000069 INF: ===================Camera #2 Frame #52===================
17-02-28 20:22:39.123 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.167 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:22:39.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:22:39.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:22:39.170 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 57, frameCount = 58.
17-02-28 20:22:39.170 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 58
17-02-28 20:22:39.170 -08 000000091 INF: ===================Camera #0 Frame #58===================
17-02-28 20:22:39.185 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 57, frameCount = 58.
17-02-28 20:22:39.185 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 58
17-02-28 20:22:39.185 -08 000000069 INF: ===================Camera #2 Frame #58===================
17-02-28 20:22:39.263 -08 000000060 INF: Y Motor: Unshifted Position: 4879538
17-02-28 20:22:39.313 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.341 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:22:39.341 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:22:39.341 -08 000000091 INF: ===================Camera #0 Frame #64===================
17-02-28 20:22:39.360 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 64, frameCount = 65.
17-02-28 20:22:39.360 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 65
17-02-28 20:22:39.360 -08 000000069 INF: ===================Camera #2 Frame #65===================
17-02-28 20:22:39.435 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.518 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71.
17-02-28 20:22:39.518 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71
17-02-28 20:22:39.518 -08 000000091 INF: ===================Camera #0 Frame #71===================
17-02-28 20:22:39.544 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 71, frameCount = 72.
17-02-28 20:22:39.544 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 72
17-02-28 20:22:39.544 -08 000000069 INF: ===================Camera #2 Frame #72===================
17-02-28 20:22:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:22:39.553 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:39.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:39.575 -08 000000060 INF: Y Motor: Unshifted Position: 4676523
17-02-28 20:22:39.605 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:39.618 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 4, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 80, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:22:39.625 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.693 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:22:39.693 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:22:39.693 -08 000000091 INF: ===================Camera #0 Frame #77===================
17-02-28 20:22:39.705 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:22:39.717 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 77, frameCount = 78.
17-02-28 20:22:39.717 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 78
17-02-28 20:22:39.717 -08 000000069 INF: ===================Camera #2 Frame #78===================
17-02-28 20:22:39.747 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.791 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:22:39.791 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:22:39.868 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84.
17-02-28 20:22:39.868 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84
17-02-28 20:22:39.868 -08 000000091 INF: ===================Camera #0 Frame #84===================
17-02-28 20:22:39.887 -08 000000060 INF: Y Motor: Unshifted Position: 4473712
17-02-28 20:22:39.888 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84.
17-02-28 20:22:39.888 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84
17-02-28 20:22:39.888 -08 000000069 INF: ===================Camera #2 Frame #84===================
17-02-28 20:22:39.891 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:22:39.937 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:39.978 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:40.039 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:22:40.039 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:22:40.039 -08 000000091 INF: ===================Camera #0 Frame #90===================
17-02-28 20:22:40.057 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:22:40.057 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:22:40.057 -08 000000069 INF: ===================Camera #2 Frame #91===================
17-02-28 20:22:40.059 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:40.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:40.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:40.199 -08 000000060 INF: Y Motor: Unshifted Position: 4270696
17-02-28 20:22:40.208 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:22:40.208 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:22:40.208 -08 000000091 INF: ===================Camera #0 Frame #96===================
17-02-28 20:22:40.230 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 96, frameCount = 97.
17-02-28 20:22:40.230 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 97
17-02-28 20:22:40.230 -08 000000069 INF: ===================Camera #2 Frame #97===================
17-02-28 20:22:40.249 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:40.372 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:40.377 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:22:40.377 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:22:40.377 -08 000000091 INF: ===================Camera #0 Frame #102===================
17-02-28 20:22:40.400 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 102, frameCount = 103.
17-02-28 20:22:40.400 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 103
17-02-28 20:22:40.400 -08 000000069 INF: ===================Camera #2 Frame #103===================
17-02-28 20:22:40.415 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:40.480 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:40.509 -08 000000060 INF: Y Motor: Unshifted Position: 4067241
17-02-28 20:22:40.546 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:22:40.546 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:22:40.546 -08 000000091 INF: ===================Camera #0 Frame #109===================
17-02-28 20:22:40.559 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:40.569 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:22:40.569 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:22:40.569 -08 000000069 INF: ===================Camera #2 Frame #109===================
17-02-28 20:22:40.580 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:22:40.666 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:40.684 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:40.718 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:22:40.718 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:22:40.718 -08 000000091 INF: ===================Camera #0 Frame #115===================
17-02-28 20:22:40.739 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:22:40.739 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:22:40.739 -08 000000069 INF: ===================Camera #2 Frame #116===================
17-02-28 20:22:40.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:40.821 -08 000000060 INF: Y Motor: Unshifted Position: 3864229
17-02-28 20:22:40.851 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:40.851 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:22:40.871 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:40.887 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:22:40.887 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:22:40.887 -08 000000091 INF: ===================Camera #0 Frame #121===================
17-02-28 20:22:40.912 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 121, frameCount = 122.
17-02-28 20:22:40.912 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 122
17-02-28 20:22:40.912 -08 000000069 INF: ===================Camera #2 Frame #122===================
17-02-28 20:22:40.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP15360R\r
17-02-28 20:22:40.995 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.040 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:41.056 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:22:41.056 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:22:41.056 -08 000000091 INF: ===================Camera #0 Frame #127===================
17-02-28 20:22:41.082 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128.
17-02-28 20:22:41.082 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128
17-02-28 20:22:41.082 -08 000000069 INF: ===================Camera #2 Frame #128===================
17-02-28 20:22:41.134 -08 000000060 INF: Y Motor: Unshifted Position: 3660773
17-02-28 20:22:41.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:41.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:41.184 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.225 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:22:41.225 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:22:41.225 -08 000000091 INF: ===================Camera #0 Frame #134===================
17-02-28 20:22:41.251 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:22:41.251 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:22:41.251 -08 000000069 INF: ===================Camera #2 Frame #135===================
17-02-28 20:22:41.309 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.396 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:22:41.396 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:22:41.396 -08 000000091 INF: ===================Camera #0 Frame #140===================
17-02-28 20:22:41.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:41.424 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141.
17-02-28 20:22:41.424 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141
17-02-28 20:22:41.424 -08 000000069 INF: ===================Camera #2 Frame #141===================
17-02-28 20:22:41.445 -08 000000060 INF: Y Motor: Unshifted Position: 3457761
17-02-28 20:22:41.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:41.495 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.564 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:22:41.564 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:22:41.564 -08 000000091 INF: ===================Camera #0 Frame #146===================
17-02-28 20:22:41.593 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147.
17-02-28 20:22:41.593 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147
17-02-28 20:22:41.593 -08 000000069 INF: ===================Camera #2 Frame #147===================
17-02-28 20:22:41.620 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.725 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:41.732 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:22:41.732 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:22:41.732 -08 000000091 INF: ===================Camera #0 Frame #152===================
17-02-28 20:22:41.757 -08 000000060 INF: Y Motor: Unshifted Position: 3255392
17-02-28 20:22:41.762 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:22:41.762 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:22:41.762 -08 000000069 INF: ===================Camera #2 Frame #153===================
17-02-28 20:22:41.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:41.807 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.900 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:22:41.900 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:22:41.900 -08 000000091 INF: ===================Camera #0 Frame #158===================
17-02-28 20:22:41.931 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:41.931 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:22:41.931 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:22:41.931 -08 000000069 INF: ===================Camera #2 Frame #160===================
17-02-28 20:22:42.039 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:42.068 -08 000000060 INF: Y Motor: Unshifted Position: 3053251
17-02-28 20:22:42.068 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:22:42.068 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:22:42.068 -08 000000091 INF: ===================Camera #0 Frame #165===================
17-02-28 20:22:42.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:42.103 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:22:42.103 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:22:42.103 -08 000000069 INF: ===================Camera #2 Frame #166===================
17-02-28 20:22:42.118 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:42.239 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:22:42.239 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:22:42.239 -08 000000091 INF: ===================Camera #0 Frame #171===================
17-02-28 20:22:42.243 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:42.272 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:22:42.272 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:22:42.272 -08 000000069 INF: ===================Camera #2 Frame #172===================
17-02-28 20:22:42.351 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:42.380 -08 000000060 INF: Y Motor: Unshifted Position: 2850453
17-02-28 20:22:42.407 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:22:42.407 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:22:42.407 -08 000000091 INF: ===================Camera #0 Frame #177===================
17-02-28 20:22:42.413 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:42.430 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:42.441 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:22:42.441 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:22:42.441 -08 000000069 INF: ===================Camera #2 Frame #178===================
17-02-28 20:22:42.555 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:42.575 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:22:42.575 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:22:42.575 -08 000000091 INF: ===================Camera #0 Frame #183===================
17-02-28 20:22:42.610 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:22:42.610 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:22:42.610 -08 000000069 INF: ===================Camera #2 Frame #185===================
17-02-28 20:22:42.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:42.692 -08 000000060 INF: Y Motor: Unshifted Position: 2647436
17-02-28 20:22:42.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:42.742 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:42.743 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:22:42.743 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:22:42.743 -08 000000091 INF: ===================Camera #0 Frame #189===================
17-02-28 20:22:42.782 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:22:42.782 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:22:42.782 -08 000000069 INF: ===================Camera #2 Frame #191===================
17-02-28 20:22:42.869 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:42.911 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:22:42.911 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:22:42.911 -08 000000091 INF: ===================Camera #0 Frame #196===================
17-02-28 20:22:42.951 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:22:42.951 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:22:42.951 -08 000000069 INF: ===================Camera #2 Frame #197===================
17-02-28 20:22:42.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:43.006 -08 000000060 INF: Y Motor: Unshifted Position: 2445293
17-02-28 20:22:43.036 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:43.056 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:43.082 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:22:43.082 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:22:43.082 -08 000000091 INF: ===================Camera #0 Frame #202===================
17-02-28 20:22:43.120 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:22:43.120 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:22:43.120 -08 000000069 INF: ===================Camera #2 Frame #203===================
17-02-28 20:22:43.181 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:43.250 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:22:43.250 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:22:43.250 -08 000000091 INF: ===================Camera #0 Frame #208===================
17-02-28 20:22:43.286 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:43.289 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:22:43.289 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:22:43.289 -08 000000069 INF: ===================Camera #2 Frame #210===================
17-02-28 20:22:43.316 -08 000000060 INF: Y Motor: Unshifted Position: 2241624
17-02-28 20:22:43.349 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:43.366 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:43.418 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:22:43.418 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:22:43.418 -08 000000091 INF: ===================Camera #0 Frame #214===================
17-02-28 20:22:43.461 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:22:43.461 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:22:43.461 -08 000000069 INF: ===================Camera #2 Frame #216===================
17-02-28 20:22:43.491 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:43.586 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:22:43.586 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:22:43.586 -08 000000091 INF: ===================Camera #0 Frame #221===================
17-02-28 20:22:43.599 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:43.630 -08 000000060 INF: Y Motor: Unshifted Position: 2038827
17-02-28 20:22:43.630 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:22:43.630 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:22:43.630 -08 000000069 INF: ===================Camera #2 Frame #222===================
17-02-28 20:22:43.660 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:43.680 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:43.757 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:22:43.757 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:22:43.757 -08 000000091 INF: ===================Camera #0 Frame #227===================
17-02-28 20:22:43.799 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:22:43.799 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:22:43.799 -08 000000069 INF: ===================Camera #2 Frame #228===================
17-02-28 20:22:43.805 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:43.910 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:43.925 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:22:43.925 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:22:43.925 -08 000000091 INF: ===================Camera #0 Frame #233===================
17-02-28 20:22:43.942 -08 000000060 INF: Y Motor: Unshifted Position: 1836458
17-02-28 20:22:43.968 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:22:43.968 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:22:43.968 -08 000000069 INF: ===================Camera #2 Frame #235===================
17-02-28 20:22:43.972 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:43.992 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.093 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:22:44.093 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:22:44.093 -08 000000091 INF: ===================Camera #0 Frame #239===================
17-02-28 20:22:44.117 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.140 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:22:44.140 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:22:44.140 -08 000000069 INF: ===================Camera #2 Frame #241===================
17-02-28 20:22:44.222 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:44.254 -08 000000060 INF: Y Motor: Unshifted Position: 1633438
17-02-28 20:22:44.262 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:22:44.262 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:22:44.262 -08 000000091 INF: ===================Camera #0 Frame #245===================
17-02-28 20:22:44.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:44.304 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.311 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:22:44.311 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:22:44.311 -08 000000069 INF: ===================Camera #2 Frame #247===================
17-02-28 20:22:44.427 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.432 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:22:44.432 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:22:44.432 -08 000000091 INF: ===================Camera #0 Frame #252===================
17-02-28 20:22:44.480 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:22:44.480 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:22:44.480 -08 000000069 INF: ===================Camera #2 Frame #253===================
17-02-28 20:22:44.535 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:44.564 -08 000000060 INF: Y Motor: Unshifted Position: 1429988
17-02-28 20:22:44.597 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:44.603 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:22:44.603 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:22:44.603 -08 000000091 INF: ===================Camera #0 Frame #258===================
17-02-28 20:22:44.614 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.649 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:22:44.649 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:22:44.649 -08 000000069 INF: ===================Camera #2 Frame #260===================
17-02-28 20:22:44.739 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.771 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:22:44.771 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:22:44.771 -08 000000091 INF: ===================Camera #0 Frame #264===================
17-02-28 20:22:44.821 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:22:44.821 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:22:44.821 -08 000000069 INF: ===================Camera #2 Frame #266===================
17-02-28 20:22:44.847 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:44.876 -08 000000060 INF: Y Motor: Unshifted Position: 1227174
17-02-28 20:22:44.908 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:44.926 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:44.939 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:22:44.939 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:22:44.939 -08 000000091 INF: ===================Camera #0 Frame #270===================
17-02-28 20:22:44.990 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:22:44.990 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:22:44.990 -08 000000069 INF: ===================Camera #2 Frame #272===================
17-02-28 20:22:45.012 -08 000000069 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:22:45.013 -08 000000069 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:45.033 -08 000000104 INF: FPGA: Recv TDIYWAIT
17-02-28 20:22:45.033 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:45.034 -08 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:22:45.035 -08 000000035 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:22:45.035 -08 000000046 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:22:45.036 -08 000000035 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:22:45.036 -08 000000035 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:22:45.036 -08 000000035 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:22:45.036 -08 000000046 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:22:45.036 -08 000000046 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:22:45.036 -08 000000046 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:22:45.036 -08 000000035 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:22:45.037 -08 000000046 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:22:45.053 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:45.158 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:45.189 -08 000000069 INF: Camera #2 ReleaseBuffer
17-02-28 20:22:45.189 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:22:45.189 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:22:45.189 -08 000000091 INF: ===================Camera #0 Frame #272===================
17-02-28 20:22:45.189 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:22:45.190 -08 000000060 INF: Y Motor: Unshifted Position: 1024814
17-02-28 20:22:45.195 -08 000000091 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:22:45.196 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:45.220 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:45.221 -08 000000069 INF: ======================================
17-02-28 20:22:45.240 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:45.328 -08 000000091 INF: Camera #0 ReleaseBuffer
17-02-28 20:22:45.328 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:22:45.359 -08 000000091 INF: ======================================
17-02-28 20:22:45.361 -08 000000099 INF: ===================Camera TDI===================
17-02-28 20:22:45.362 -08 000000099 INF: ======================================
17-02-28 20:22:45.378 -08 000000060 INF: Y Motor: Unshifted Position: 990993
17-02-28 20:22:45.378 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:45.378 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:45.406 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:22:45.406 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:22:45.406 -08 000000046 INF: Excitation Filter 1: Moved 107 steps in 370.1024 ms
17-02-28 20:22:45.406 -08 000000035 INF: Excitation Filter 2: Moved 107 steps in 370.259 ms
17-02-28 20:22:45.406 -08 000000046 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.2103 ms
17-02-28 20:22:45.406 -08 000000046 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.3494 ms
17-02-28 20:22:45.406 -08 000000035 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.3928 ms
17-02-28 20:22:45.406 -08 000000035 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.5685 ms
17-02-28 20:22:45.406 -08 000000046 INF: ======================================
17-02-28 20:22:45.406 -08 000000035 INF: ======================================
17-02-28 20:22:45.408 -08 000000085 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:45.409 -08 000000085 INF: ======================================
17-02-28 20:22:45.439 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:22:45.439 -08 000000060 INF: Y Motor: Moved to 14.9099 after 7862 ms
17-02-28 20:22:45.439 -08 000000060 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:45.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:45.500 -08 000000060 INF: Y Motor: Recv v 4097\r
17-02-28 20:22:45.500 -08 000000060 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:45.500 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:45.530 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:45.564 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:22:45.564 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:45.564 -08 000000060 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: Recv v 134217728\r
17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:45.625 -08 000000060 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:45.687 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:45.751 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:22:45.751 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:45.751 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:45.780 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:45.814 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:22:45.814 -08 000000060 INF: ======================================
17-02-28 20:22:45.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:45.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:45.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:45.817 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:22:45.843 -08 000000010 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:22:45.843 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:45.844 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:45.904 -08 000000046 INF: FPGA: Recv TDIYERD 1490994
17-02-28 20:22:45.904 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:22:45.968 -08 000000036 INF: FPGA: Recv ZADCR 34869
17-02-28 20:22:45.968 -08 000000042 INF: At scan end Y pos = 14.910 and Z pos = -0.133. Y moved -48.539 mm
17-02-28 20:22:45.968 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:22:46.029 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:22:46.029 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:22:46.029 -08 000000042 INF: TDIScan finished after 12624.5297 ms
17-02-28 20:22:46.029 -08 000000042 INF: Image[0]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:22:46.029 -08 000000042 INF: Image[2]: Y should trigger at 63.449 mm, 2nd row was at 64.358 mm (error = 0.909 mm)
17-02-28 20:22:46.031 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.066 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.608 um
17-02-28 20:22:46.066 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.067 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:22:46.091 -08 000000064 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:22:46.091 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.092 -08 000000089 INF: ===================Dither Clean Up Command===================
17-02-28 20:22:46.092 -08 000000098 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:22:46.092 -08 000000052 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:22:46.092 -08 000000062 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:22:46.092 -08 000000052 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:46.093 -08 000000052 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:46.093 -08 000000098 INF: ======================================
17-02-28 20:22:46.093 -08 000000062 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:22:46.093 -08 000000062 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:22:46.093 -08 000000046 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:22:46.093 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:46.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:46.094 -08 000000046 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:22:46.096 -08 000000083 INF: ===================LFT:Extracting coords===================
17-02-28 20:22:46.121 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:46.122 -08 000000083 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:22:46.122 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.122 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.123 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.123 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.123 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:46.123 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:46.123 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:46.123 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:22:46.126 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:22:46.126 -08 000000052 INF: ======================================
17-02-28 20:22:46.155 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:46.155 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:22:46.155 -08 000000046 INF: FPGA: Xmit ZDACW 40366\n
17-02-28 20:22:46.155 -08 000000062 INF: ======================================
17-02-28 20:22:46.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:46.197 -08 000000051 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:46.197 -08 000000082 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:46.197 -08 000000076 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:46.197 -08 000000085 INF: FC:B, C:3,L:2, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:22:46.220 -08 000000052 INF: FPGA: Recv ZDACW 
17-02-28 20:22:46.220 -08 000000046 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:22:46.221 -08 000000046 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:22:46.281 -08 000000038 INF: FPGA: Recv TDIBB
17-02-28 20:22:46.281 -08 000000046 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:22:46.282 -08 000000046 INF: ======================================
17-02-28 20:22:46.349 -08 000000051 INF: LFT found best fwhm score 2.000728 in 151 ms
17-02-28 20:22:46.349 -08 000000076 INF: LFT found best fwhm score 2.000031 in 151 ms
17-02-28 20:22:46.350 -08 000000076 INF: LFT found good score at index 6937 with fwhm value 2.000031. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T
17-02-28 20:22:46.350 -08 000000051 INF: LFT found good score at index 1565 with fwhm value 2.000728. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:2,T
17-02-28 20:22:46.350 -08 000000082 INF: LFT found best fwhm score 2.173983 in 152 ms
17-02-28 20:22:46.350 -08 000000082 INF: LFT found good score at index 2157 with fwhm value 2.173983. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:2,T
17-02-28 20:22:46.350 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.350 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.350 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.350 -08 000000085 INF: LFT found best fwhm score 2.000233 in 151 ms
17-02-28 20:22:46.350 -08 000000085 INF: LFT found good score at index 6833 with fwhm value 2.000233. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:2,T
17-02-28 20:22:46.350 -08 000000051 INF: ======================================
17-02-28 20:22:46.350 -08 000000082 INF: ======================================
17-02-28 20:22:46.350 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:22:46.351 -08 000000076 INF: ======================================
17-02-28 20:22:46.351 -08 000000085 INF: ======================================
17-02-28 20:22:46.352 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:22:46.353 -08 000000083 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:2,T
17-02-28 20:22:46.353 -08 000000083 INF: ======================================
17-02-28 20:22:46.354 -08 000000089 INF: ======================================
17-02-28 20:22:46.355 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:22:46.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Aspirating port PortB===================
17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:22:46.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2, Swath 2 - X = 72.50464 Y = 39.76308===================
17-02-28 20:22:46.381 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:22:46.381 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:46.381 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:46.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:46.382 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:22:46.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 2===================
17-02-28 20:22:46.383 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:22:46.399 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.400 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.401 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:46.401 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:46.437 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:46.454 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":2,"Tile":1206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF221","HCSMMF249","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.501 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:46.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.502 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:22:46.502 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:22:46.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:46.589 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":2,"Tile":1205,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF263","HCSMMF247","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.614 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":2,"Tile":1209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF194","HCSMMF187","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.620 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":2,"Tile":1201,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF228","HCSMMF231","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.625 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":2,"Tile":1212,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF278","HCSMMF284","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.635 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":2,"Tile":1203,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF275","HCSMMF211","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.637 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":2,"Tile":1202,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF191","HCSMMF207","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.641 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":2,"Tile":1204,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF205","HCSMMF204","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.648 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":2,"Tile":1208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF230","HCSMMF241","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.658 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":2,"Tile":1214,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF256","HCSMMF195","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.660 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":2,"Tile":1213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF181","HCSMMF200","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.661 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":2,"Tile":1207,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF262","HCSMMF269","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.664 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":2,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF286","HCSMMF254","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.670 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":2,"Tile":1218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF238","HCSMMF226","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.676 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":2,"Tile":1215,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF213","HCSMMF273","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.681 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":2,"Tile":1216,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF189","HCSMMF266","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.682 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":2,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF219","HCSMMF282","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.684 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":2,"Tile":1211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF201","HCSMMF264","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.685 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":2,"Tile":1222,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF198","HCSMMF270","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.686 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":2,"Tile":1217,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF227","HCSMMF258","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.686 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":2,"Tile":1221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF265","HCSMMF190","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.687 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":2,"Tile":1220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF246","HCSMMF287","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.688 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":2,"Tile":1227,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF243","HCSMMF220","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.689 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":2,"Tile":1224,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF180","HCSMMF285","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.690 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":2,"Tile":1228,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF252","HCSMMF209","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.691 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":2,"Tile":1226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF276","HCSMMF271","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.691 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":2,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF216","HCSMMF202","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.692 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":2,"Tile":1225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF281","HCSMMF217","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:22:46.695 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:46.701 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:22:46.813 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:46.813 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:22:46.838 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:46.850 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:46.856 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:22:46.890 -08 000000060 INF: FPGA: Recv MIOCOMPR
17-02-28 20:22:46.890 -08 000000042 INF: Compensator: Moved OutOfPath in 388 ms
17-02-28 20:22:46.890 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:22:46.891 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:46.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.893 -08 000000104 INF: ===================Move Tilt Motor 2===================
17-02-28 20:22:46.893 -08 000000077 INF: ===================Move Tilt Motor 3===================
17-02-28 20:22:46.893 -08 000000062 INF: ===================Move Tilt Motor 1===================
17-02-28 20:22:46.893 -08 000000077 INF: ======================================
17-02-28 20:22:46.893 -08 000000062 INF: ======================================
17-02-28 20:22:46.894 -08 000000104 INF: ======================================
17-02-28 20:22:46.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:46.902 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:22:46.911 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:22:46.911 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:22:46.911 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:22:46.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:46.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:46.915 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:22:46.915 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:22:46.915 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:22:46.944 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:46.950 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:22:46.953 -08 000000010 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:46.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:46.953 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:22:46.953 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1540 mm
17-02-28 20:22:46.953 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:22:47.014 -08 000000033 INF: FPGA: Recv ZTRG 
17-02-28 20:22:47.014 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:22:47.076 -08 000000109 INF: FPGA: Recv ZYT 
17-02-28 20:22:47.076 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:22:47.076 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:22:47.084 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:47.090 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:22:47.137 -08 000000091 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:22:47.137 -08 000000091 INF: FPGA: Recv ZMV 
17-02-28 20:22:47.137 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:22:47.137 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.019 ms
17-02-28 20:22:47.137 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:22:47.141 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:47.173 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:22:47.202 -08 000000073 INF: FPGA: Recv ZDACR 60292
17-02-28 20:22:47.202 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.5724 ms w/comms
17-02-28 20:22:47.202 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:47.202 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.764 ms
17-02-28 20:22:47.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:47.203 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:47.203 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:22:47.211 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:22:47.211 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:47.211 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:47.211 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:22:47.211 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:22:47.264 -08 000000109 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:47.285 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:47.285 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:22:47.294 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:22:47.294 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:47.294 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:22:47.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:47.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:22:47.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:47.296 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:22:47.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:47.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:47.298 -08 000000045 INF: ===================MoveEmissionFilters===================
17-02-28 20:22:47.298 -08 000000073 INF: ===================Move X,Y===================
17-02-28 20:22:47.299 -08 000000073 INF: ===================Move X,Y, Parallel===================
17-02-28 20:22:47.299 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:47.299 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:47.299 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:47.299 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:47.300 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:22:47.300 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:47.300 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:47.300 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:22:47.300 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:47.300 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:47.300 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:47.300 -08 000000030 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9099 mm
17-02-28 20:22:47.300 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:47.301 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:47.301 -08 000000083 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:22:47.301 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:22:47.301 -08 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:22:47.301 -08 000000087 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:22:47.301 -08 000000069 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:22:47.301 -08 000000083 INF: ======================================
17-02-28 20:22:47.301 -08 000000082 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:22:47.301 -08 000000072 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:22:47.301 -08 000000047 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:22:47.302 -08 000000082 INF: ======================================
17-02-28 20:22:47.302 -08 000000047 INF: ======================================
17-02-28 20:22:47.302 -08 000000072 INF: ======================================
17-02-28 20:22:47.302 -08 000000087 INF: ======================================
17-02-28 20:22:47.303 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:47.304 -08 000000033 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:22:47.304 -08 000000033 INF: ======================================
17-02-28 20:22:47.304 -08 000000095 INF: ======================================
17-02-28 20:22:47.304 -08 000000069 INF: ======================================
17-02-28 20:22:47.305 -08 000000050 INF: ======================================
17-02-28 20:22:47.305 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:47.305 -08 000000058 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:47.306 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:47.307 -08 000000078 INF: ======================================
17-02-28 20:22:47.307 -08 000000058 INF: ======================================
17-02-28 20:22:47.307 -08 000000108 INF: ======================================
17-02-28 20:22:47.308 -08 000000045 INF: ======================================
17-02-28 20:22:47.326 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:22:47.326 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:47.326 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:47.391 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:22:47.391 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:22:47.393 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:22:47.393 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4814 mm
17-02-28 20:22:47.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:22:47.453 -08 000000030 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:22:47.453 -08 000000074 INF: X Motor: Xmit MA 6437\n
17-02-28 20:22:47.457 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:22:47.515 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:22:47.515 -08 000000074 INF: X Motor: Recv MA 6437\r\n>
17-02-28 20:22:47.515 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:22:47.515 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:47.515 -08 000000074 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:22:47.515 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:47.577 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:22:47.577 -08 000000030 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:22:47.577 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:47.703 -08 000000030 INF: Y Motor: Unshifted Position: 1072130
17-02-28 20:22:47.753 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:47.766 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:47.828 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:47.878 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.013 -08 000000030 INF: Y Motor: Unshifted Position: 1780164
17-02-28 20:22:48.063 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.078 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:48.139 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:22:48.139 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:48.189 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.202 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:22:48.202 -08 000000074 INF: X Motor: Moved to 74.7153 after 686 ms
17-02-28 20:22:48.202 -08 000000074 INF: ======================================
17-02-28 20:22:48.326 -08 000000030 INF: Y Motor: Unshifted Position: 2557680
17-02-28 20:22:48.376 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.389 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:48.449 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:48.501 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.642 -08 000000030 INF: Y Motor: Unshifted Position: 3335952
17-02-28 20:22:48.692 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.699 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:48.762 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:48.813 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:48.952 -08 000000030 INF: Y Motor: Unshifted Position: 4116031
17-02-28 20:22:49.002 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:49.012 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:49.075 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:49.127 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:49.262 -08 000000030 INF: Y Motor: Unshifted Position: 4901795
17-02-28 20:22:49.312 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:49.325 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:49.385 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:49.435 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:49.576 -08 000000030 INF: Y Motor: Unshifted Position: 5677932
17-02-28 20:22:49.626 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:49.635 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:49.696 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:49.747 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:49.886 -08 000000030 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:22:49.886 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:49.886 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:49.946 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:49.948 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:22:49.948 -08 000000030 INF: Y Motor: Moved to 64.5335 after 2370 ms
17-02-28 20:22:49.948 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:50.011 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:50.012 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:22:50.012 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:50.012 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:50.074 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:22:50.074 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:50.074 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:50.143 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:50.199 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:50.261 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:22:50.261 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:50.261 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:50.261 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:50.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:50.322 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:22:50.322 -08 000000030 INF: ======================================
17-02-28 20:22:50.323 -08 000000073 INF: ===================Move X,Y===================
17-02-28 20:22:50.324 -08 000000073 INF: ======================================
17-02-28 20:22:50.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:50.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:50.327 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:22:50.327 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:22:50.385 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:50.385 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:22:50.446 -08 000000064 INF: FPGA: Recv ZFREQCL
17-02-28 20:22:50.446 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:22:50.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:50.447 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:50.508 -08 000000033 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:22:50.508 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:22:50.508 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:50.509 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:50.510 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:22:50.510 -08 000000010 INF: ===================Set YMotor gains for scans===================
17-02-28 20:22:50.511 -08 000000062 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:22:50.511 -08 000000010 INF: ======================================
17-02-28 20:22:50.511 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:22:50.512 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:22:50.513 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:22:50.513 -08 000000062 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:22:50.571 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:50.571 -08 000000078 INF: FPGA: Recv TDIYPOS
17-02-28 20:22:50.572 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:22:50.574 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:22:50.574 -08 000000062 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:22:50.633 -08 000000060 INF: FPGA: Recv TDIYARM2
17-02-28 20:22:50.634 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:50.634 -08 000000062 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:22:50.636 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:22:50.638 -08 000000062 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:22:50.639 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:22:50.641 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:22:50.642 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:22:50.643 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:50.884 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:50.946 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:51.015 -08 000000062 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:22:51.015 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:22:51.015 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:51.031 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:22:51.033 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:51.204 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:51.257 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:51.413 -08 000000062 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:22:51.413 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:22:51.413 -08 000000062 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:51.428 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:22:51.430 -08 000000062 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:22:51.432 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:22:51.435 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:51.436 -08 000000062 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:22:51.436 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:51.439 -08 000000062 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:22:51.439 -08 000000062 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:22:51.439 -08 000000062 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:22:51.439 -08 000000062 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:22:51.446 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:22:51.446 -08 000000062 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:22:51.446 -08 000000062 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:22:51.506 -08 000000051 INF: FPGA: Recv ZARM
17-02-28 20:22:51.506 -08 000000062 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.9446 ms
17-02-28 20:22:51.506 -08 000000062 INF: Z Motor: ArmAbsStepped took 67.1544 ms
17-02-28 20:22:51.507 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:51.507 -08 000000062 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:51.509 -08 000000062 INF: ===================TDI Scan Setup===================
17-02-28 20:22:51.510 -08 000000062 INF: ======================================
17-02-28 20:22:51.512 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:51.513 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:51.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:51.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:51.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:51.517 -08 000000077 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:22:51.517 -08 000000085 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:22:51.517 -08 000000077 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:22:51.517 -08 000000077 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:22:51.517 -08 000000077 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:22:51.517 -08 000000085 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:22:51.517 -08 000000085 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:22:51.517 -08 000000085 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:22:51.517 -08 000000077 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:22:51.518 -08 000000085 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:22:51.569 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:51.569 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:51.570 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:51.570 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:22:51.570 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 5 of 5 seconds left===================
17-02-28 20:22:51.880 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:22:51.880 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:22:51.880 -08 000000085 INF: Excitation Filter 1: Moved -107 steps in 363.0142 ms
17-02-28 20:22:51.880 -08 000000077 INF: Excitation Filter 2: Moved -107 steps in 363.2301 ms
17-02-28 20:22:51.880 -08 000000085 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 363.1499 ms
17-02-28 20:22:51.880 -08 000000085 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 363.3195 ms
17-02-28 20:22:51.880 -08 000000077 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.3704 ms
17-02-28 20:22:51.880 -08 000000077 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.5756 ms
17-02-28 20:22:51.881 -08 000000085 INF: ======================================
17-02-28 20:22:51.881 -08 000000077 INF: ======================================
17-02-28 20:22:51.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:51.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:51.885 -08 000000062 INF: ===================Serial===================
17-02-28 20:22:51.885 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:22:51.885 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:51.886 -08 000000104 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:51.886 -08 000000062 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:22:51.886 -08 000000051 INF: ===================Camera TDI, Parallel===================
17-02-28 20:22:51.886 -08 000000062 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:22:51.886 -08 000000104 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:22:51.886 -08 000000104 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:51.886 -08 000000104 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:51.887 -08 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:22:51.887 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:22:51.887 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:22:51.888 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:51.888 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:51.889 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:51.889 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:51.891 -08 000000082 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:22:51.944 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:22:51.944 -08 000000104 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:51.944 -08 000000104 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:52.006 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:22:52.006 -08 000000104 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:52.038 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:52.038 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:52.039 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:52.039 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:22:52.072 -08 000000104 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:22:52.131 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:22:52.131 -08 000000104 INF: Y Motor: Start the move command
17-02-28 20:22:52.131 -08 000000104 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:52.188 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:52.188 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:52.189 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:52.189 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:52.193 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:22:52.193 -08 000000104 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:22:52.193 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:52.320 -08 000000104 INF: Y Motor: Unshifted Position: 5934882
17-02-28 20:22:52.338 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:52.338 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:52.339 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:52.339 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:52.370 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:52.488 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:22:52.488 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:22:52.488 -08 000000064 INF: ===================Camera #2 Frame #1===================
17-02-28 20:22:52.489 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:22:52.489 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:22:52.489 -08 000000035 INF: ===================Camera #0 Frame #1===================
17-02-28 20:22:52.494 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:52.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:52.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 4 of 5 seconds left===================
17-02-28 20:22:52.630 -08 000000104 INF: Y Motor: Unshifted Position: 5888380
17-02-28 20:22:52.643 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:22:52.643 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:22:52.643 -08 000000064 INF: ===================Camera #2 Frame #3===================
17-02-28 20:22:52.644 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:22:52.644 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:22:52.644 -08 000000035 INF: ===================Camera #0 Frame #3===================
17-02-28 20:22:52.680 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:52.800 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:52.800 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:52.800 -08 000000035 INF: ===================Camera #0 Frame #4===================
17-02-28 20:22:52.803 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:52.803 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:22:52.803 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:22:52.805 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:52.944 -08 000000104 INF: Y Motor: Unshifted Position: 5841223
17-02-28 20:22:52.955 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:22:52.955 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:52.955 -08 000000035 INF: ===================Camera #0 Frame #5===================
17-02-28 20:22:52.958 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:22:52.958 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:52.958 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:22:52.994 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:53.004 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:22:53.004 -08 000000109 INF: FPGA: Recv TDIYWAIT
17-02-28 20:22:53.004 -08 000000062 INF: ===================Serial===================
17-02-28 20:22:53.005 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:53.006 -08 000000062 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:22:53.006 -08 000000062 INF: ===================Serial===================
17-02-28 20:22:53.007 -08 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:22:53.008 -08 000000062 INF: ======================================
17-02-28 20:22:53.008 -08 000000072 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:22:53.008 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:22:53.008 -08 000000072 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:22:53.008 -08 000000072 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:22:53.008 -08 000000072 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:22:53.008 -08 000000072 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:22:53.008 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:22:53.009 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:22:53.009 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:22:53.010 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:22:53.108 -08 000000035 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:22:53.108 -08 000000035 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:22:53.108 -08 000000035 INF: ===================Camera #0 Frame #6===================
17-02-28 20:22:53.111 -08 000000035 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:22:53.112 -08 000000035 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:53.118 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:53.139 -08 000000035 INF: Camera #0 ReleaseBuffer
17-02-28 20:22:53.139 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:22:53.139 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:22:53.139 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:22:53.140 -08 000000064 INF: ===================Camera #2 Frame #6===================
17-02-28 20:22:53.141 -08 000000035 INF: ======================================
17-02-28 20:22:53.143 -08 000000064 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:22:53.144 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:22:53.170 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:22:53.170 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:22:53.171 -08 000000064 INF: ======================================
17-02-28 20:22:53.173 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:22:53.174 -08 000000051 INF: ======================================
17-02-28 20:22:53.254 -08 000000104 INF: Y Motor: Unshifted Position: 5797061
17-02-28 20:22:53.304 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:53.379 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:22:53.379 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:22:53.379 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 370.324 ms
17-02-28 20:22:53.379 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.4978 ms
17-02-28 20:22:53.379 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.6179 ms
17-02-28 20:22:53.379 -08 000000072 INF: Excitation Filter 2: Moved 107 steps in 370.83 ms
17-02-28 20:22:53.379 -08 000000072 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.9711 ms
17-02-28 20:22:53.379 -08 000000072 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.1087 ms
17-02-28 20:22:53.380 -08 000000060 INF: ======================================
17-02-28 20:22:53.380 -08 000000072 INF: ======================================
17-02-28 20:22:53.381 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:53.382 -08 000000082 INF: ======================================
17-02-28 20:22:53.443 -08 000000104 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:22:53.443 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:53.443 -08 000000104 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:53.506 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:22:53.506 -08 000000104 INF: Y Motor: Moved to 62.9704 after 1313 ms
17-02-28 20:22:53.506 -08 000000104 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:53.570 -08 000000104 INF: Y Motor: Recv v 4097\r
17-02-28 20:22:53.570 -08 000000104 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:53.570 -08 000000104 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:53.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:53.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 3 of 5 seconds left===================
17-02-28 20:22:53.630 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:22:53.630 -08 000000104 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:53.630 -08 000000104 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: Recv v 134217728\r
17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:53.692 -08 000000104 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:53.754 -08 000000104 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:53.816 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:22:53.816 -08 000000104 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:53.816 -08 000000104 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:53.879 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:22:53.879 -08 000000104 INF: ======================================
17-02-28 20:22:53.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:53.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:22:53.882 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:53.882 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:22:53.938 -08 000000109 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:22:53.938 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:54.003 -08 000000072 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:22:54.003 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:22:54.065 -08 000000069 INF: FPGA: Recv ZADCR 2428
17-02-28 20:22:54.065 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:22:54.065 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:22:54.127 -08 000000091 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:22:54.127 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:22:54.127 -08 000000042 INF: TDIScan finished after 6842.4995 ms
17-02-28 20:22:54.127 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:22:54.127 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:22:54.128 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:22:54.191 -08 000000051 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:22:54.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.194 -08 000000039 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:22:54.194 -08 000000023 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:22:54.194 -08 000000082 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:22:54.194 -08 000000023 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:22:54.194 -08 000000023 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:22:54.194 -08 000000039 INF: ======================================
17-02-28 20:22:54.195 -08 000000082 INF: ======================================
17-02-28 20:22:54.253 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:22:54.253 -08 000000023 INF: ======================================
17-02-28 20:22:54.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:22:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:22:54.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.342 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:22:54.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.384 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:22:54.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:22:54.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:54.416 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:54.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:22:54.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:54.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:22:54.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:22:54.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:54.571 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 2 of 5 seconds left===================
17-02-28 20:22:55.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:22:55.134 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.086905878476007Best Z position at top surface = -0.158569291997262Best Z position at top surface + compensator offset = -0.135869291997262 C:3,L:3,T
17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.158569291997262
17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97003
17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.086905878476007
17-02-28 20:22:55.135 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62504
17-02-28 20:22:55.135 -08 000000042 INF: Z-height at LaneTopSurface is -0.158569291997262.
17-02-28 20:22:55.135 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:55.268 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:22:55.268 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:22:55.311 -08 000000074 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:55.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Focus Point 1===================
17-02-28 20:22:55.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.313 -08 000000042 INF: Lane 3, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:22:55.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.314 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.314 -08 000000030 INF: ===================Move Tilt Motor 1===================
17-02-28 20:22:55.315 -08 000000095 INF: ===================Move Tilt Motor 2===================
17-02-28 20:22:55.315 -08 000000046 INF: ===================Move Tilt Motor 3===================
17-02-28 20:22:55.315 -08 000000030 INF: ======================================
17-02-28 20:22:55.315 -08 000000046 INF: ======================================
17-02-28 20:22:55.316 -08 000000095 INF: ======================================
17-02-28 20:22:55.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.318 -08 000000042 INF: ETF Best Z: -0.1358693 mm (35617 DAC)
17-02-28 20:22:55.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.319 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.319 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:22:55.319 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:22:55.764 -08 000000059 INF: FPGA: Recv MIOCOMPF
17-02-28 20:22:55.764 -08 000000042 INF: Compensator: Moved IntoPath in 445 ms
17-02-28 20:22:55.764 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:55.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.765 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Delay 1 of 5 seconds left===================
17-02-28 20:22:55.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:22:55.772 -08 000000042 INF: Swath 1 position calculated to be: {X=74.16164, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:22:55.772 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26964, Y=39.76308} from estimated center X= 74.67699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:22:55.778 -08 000000042 INF: Swath 0: Converted transform from (-42.33193, 12.56892) pixels to (-0.01449, 0.004485) mm.
17-02-28 20:22:55.783 -08 000000042 INF: Swath 1: Converted transform from (-57.45794, 12.42819) pixels to (-0.019665, 0.00414) mm.
17-02-28 20:22:55.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:22:55.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:22:55.784 -08 000000042 INF: Transformed XStagePosition from 74.16164 mm to 74.1471463525668 mm.
17-02-28 20:22:55.796 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5575743553937 mm.
17-02-28 20:22:55.796 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3575743553937 mm.
17-02-28 20:22:55.796 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4483243553936 mm.
17-02-28 20:22:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:22:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:55.798 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:22:55.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:55.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:55.808 -08 000000069 INF: ===================MoveEmissionFilters===================
17-02-28 20:22:55.808 -08 000000074 INF: ===================Move X,Y===================
17-02-28 20:22:55.808 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:55.809 -08 000000074 INF: ===================Move X,Y, Parallel===================
17-02-28 20:22:55.809 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:55.809 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:22:55.809 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:55.809 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:55.809 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:55.809 -08 000000091 INF: ===================Move X Motor without settling===================
17-02-28 20:22:55.809 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:55.810 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:55.810 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:55.810 -08 000000098 INF: Y Motor: Moving to 64.5576 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:22:55.810 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:22:55.810 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:55.810 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:55.810 -08 000000091 INF: X Motor: Xmit PR VM\n
17-02-28 20:22:55.810 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:22:55.811 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:22:55.811 -08 000000060 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:22:55.811 -08 000000066 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:22:55.811 -08 000000109 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:22:55.811 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:22:55.811 -08 000000058 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:22:55.811 -08 000000037 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:22:55.811 -08 000000085 INF: ======================================
17-02-28 20:22:55.811 -08 000000010 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:22:55.811 -08 000000099 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:22:55.812 -08 000000066 INF: ======================================
17-02-28 20:22:55.812 -08 000000010 INF: ======================================
17-02-28 20:22:55.812 -08 000000099 INF: ======================================
17-02-28 20:22:55.812 -08 000000060 INF: ======================================
17-02-28 20:22:55.813 -08 000000037 INF: ======================================
17-02-28 20:22:55.813 -08 000000035 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:22:55.813 -08 000000035 INF: Z Motor: Moving to -0.1559 mm, started at -0.0100 mm
17-02-28 20:22:55.813 -08 000000035 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:22:55.813 -08 000000095 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:22:55.813 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:22:55.814 -08 000000109 INF: ======================================
17-02-28 20:22:55.814 -08 000000058 INF: ======================================
17-02-28 20:22:55.814 -08 000000095 INF: ======================================
17-02-28 20:22:55.814 -08 000000030 INF: ======================================
17-02-28 20:22:55.815 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:22:55.815 -08 000000046 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:22:55.816 -08 000000050 INF: ======================================
17-02-28 20:22:55.816 -08 000000046 INF: ======================================
17-02-28 20:22:55.817 -08 000000069 INF: ======================================
17-02-28 20:22:55.827 -08 000000047 INF: FPGA: Recv ZTRG 
17-02-28 20:22:55.827 -08 000000035 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:22:55.888 -08 000000109 INF: FPGA: Recv ZYT 
17-02-28 20:22:55.888 -08 000000035 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:22:55.888 -08 000000035 INF: FPGA: Xmit ZMV 40860\n
17-02-28 20:22:55.890 -08 000000091 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:22:55.890 -08 000000091 INF: X Motor: Xmit PR VI\n
17-02-28 20:22:55.890 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:22:55.890 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:55.890 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:55.953 -08 000000033 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:22:55.953 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:22:55.955 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:22:55.955 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Moving to 74.1471 mm @15.000 mm/sec, started at 74.7153 mm
17-02-28 20:22:55.955 -08 000000091 INF: X Motor: Xmit MA 6204\n
17-02-28 20:22:56.017 -08 000000091 INF: X Motor: Recv MA 6204\r\n>
17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:56.017 -08 000000091 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Set target position to 5955757 encoder counts
17-02-28 20:22:56.017 -08 000000098 INF: Y Motor: Xmit s r0xca 5955757\r
17-02-28 20:22:56.077 -08 000000073 INF: FPGA: Recv ZMV 
17-02-28 20:22:56.077 -08 000000035 INF: Z Motor: MoveAndTrigger 'ZMV' command took 188.8581 ms
17-02-28 20:22:56.077 -08 000000035 INF: FPGA: Xmit ZDACR\n
17-02-28 20:22:56.079 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:22:56.079 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:22:56.079 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:56.139 -08 000000108 INF: FPGA: Recv ZDACR 40860
17-02-28 20:22:56.139 -08 000000035 INF: Z Motor: MoveAndTrigger took 326.2357 ms w/comms
17-02-28 20:22:56.139 -08 000000035 INF: Z Motor: After move to -0.1559, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:22:56.139 -08 000000035 INF: Z Motor: MoveAbsStepped took 326.3958 ms
17-02-28 20:22:56.139 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:56.141 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:22:56.141 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:22:56.141 -08 000000098 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:22:56.141 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:56.142 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:22:56.142 -08 000000064 INF: ===================Camera Arm TDI===================
17-02-28 20:22:56.142 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:56.143 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:56.143 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:22:56.143 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:56.143 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:56.144 -08 000000072 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:22:56.201 -08 000000101 INF: FPGA: Recv ZSEL 
17-02-28 20:22:56.202 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:56.202 -08 000000072 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:22:56.263 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:22:56.263 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:22:56.264 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:22:56.265 -08 000000098 INF: Y Motor: Unshifted Position: 5878115
17-02-28 20:22:56.265 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:56.266 -08 000000072 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:22:56.266 -08 000000072 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:22:56.266 -08 000000072 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:22:56.316 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:56.326 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:22:56.326 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:56.328 -08 000000072 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:22:56.328 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:56.330 -08 000000072 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:22:56.330 -08 000000072 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:22:56.330 -08 000000072 INF: Z Motor: Arming to move to -0.1159 mm
17-02-28 20:22:56.330 -08 000000072 INF: FPGA: Xmit ZYT 6435757 4\n
17-02-28 20:22:56.391 -08 000000059 INF: FPGA: Recv ZYT 
17-02-28 20:22:56.391 -08 000000072 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378115 enc / 63.781 mm / ) = 6435757 enc / 64.358 mm
17-02-28 20:22:56.391 -08 000000072 INF: FPGA: Xmit ZARM 30374\n
17-02-28 20:22:56.443 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:56.453 -08 000000082 INF: FPGA: Recv ZARM
17-02-28 20:22:56.453 -08 000000072 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8085 ms
17-02-28 20:22:56.453 -08 000000072 INF: Z Motor: ArmAbsStepped took 123.0464 ms
17-02-28 20:22:56.454 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:22:56.455 -08 000000091 INF: X Motor: Xmit PR ER\n
17-02-28 20:22:56.455 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:22:56.456 -08 000000072 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:22:56.457 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:22:56.458 -08 000000072 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:22:56.459 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:22:56.460 -08 000000072 INF: ======================================
17-02-28 20:22:56.518 -08 000000091 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:22:56.518 -08 000000091 INF: X Motor: Moved to 74.1465 after 500 ms
17-02-28 20:22:56.518 -08 000000091 INF: ======================================
17-02-28 20:22:56.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:56.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:56.573 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:22:56.573 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:56.579 -08 000000098 INF: Y Motor: Unshifted Position: 5955758
17-02-28 20:22:56.579 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:22:56.579 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:56.641 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:22:56.641 -08 000000098 INF: Y Motor: Moved to 64.5576 after 499 ms
17-02-28 20:22:56.641 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:22:56.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:22:56.703 -08 000000098 INF: Y Motor: Recv v 4096\r
17-02-28 20:22:56.703 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:22:56.703 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:56.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:22:56.764 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:22:56.765 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:22:56.765 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:56.765 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: Recv v 402653184\r
17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:22:56.828 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:22:56.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:22:56.891 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:56.894 -08 000000078 INF: RunCopyService queue size at 2/28/2017 8:22:56 PM is 2
17-02-28 20:22:56.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`15360 (0x03)\r\n(0xFF)
17-02-28 20:22:56.951 -08 000000018 INF: Current Position of Pump is: 15360
17-02-28 20:22:56.951 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4), Dispensing port PortC===================
17-02-28 20:22:56.953 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:22:56.953 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:22:56.953 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:57.018 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:22:57.018 -08 000000098 INF: ======================================
17-02-28 20:22:57.019 -08 000000074 INF: ===================Move X,Y===================
17-02-28 20:22:57.020 -08 000000074 INF: ======================================
17-02-28 20:22:57.051 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD15360R\r
17-02-28 20:22:57.069 -08 000000064 INF: Camera #0 AttachBuffer (imageDataPtr = 56908255280 imgPtr = 56908255280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:22:57.070 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:22:57.070 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:57.085 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:57.087 -08 000000064 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:22:57.140 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:57.240 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:57.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:57.576 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:57.639 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:57.889 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:57.951 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:58.105 -08 000000064 INF: Camera #2 AttachBuffer (imageDataPtr = 58720194608 imgPtr = 59626164272 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:22:58.105 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:22:58.106 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:22:58.121 -08 000000064 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:22:58.123 -08 000000064 INF: ===================Camera Arm TDI===================
17-02-28 20:22:58.124 -08 000000064 INF: ======================================
17-02-28 20:22:58.125 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:22:58.126 -08 000000035 INF: ======================================
17-02-28 20:22:58.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:22:58.128 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:58.128 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:22:58.128 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:22:58.201 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:58.202 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:22:58.202 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:22:58.260 -08 000000098 INF: FPGA: Recv ZFREQCL
17-02-28 20:22:58.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:22:58.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:58.261 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:22:58.261 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:58.326 -08 000000074 INF: FPGA: Recv TDIYERD 6455758
17-02-28 20:22:58.326 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455758 counts (64.558 mm)
17-02-28 20:22:58.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:58.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:58.327 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:58.327 -08 000000091 INF: ===================Set YMotor gains for scans===================
17-02-28 20:22:58.328 -08 000000091 INF: ======================================
17-02-28 20:22:58.328 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:58.329 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:22:58.329 -08 000000073 INF: FPGA: Xmit TDIYPOS 6344832\n
17-02-28 20:22:58.387 -08 000000085 INF: FPGA: Recv TDIYPOS
17-02-28 20:22:58.387 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:58.389 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:22:58.389 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6435757 1 1\n
17-02-28 20:22:58.451 -08 000000050 INF: FPGA: Recv TDIYARM3
17-02-28 20:22:58.452 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:22:58.453 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:22:58.454 -08 000000073 INF: ======================================
17-02-28 20:22:58.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:22:58.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:22:58.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:58.456 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:58.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:58.457 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:22:58.457 -08 000000099 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:22:58.458 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:22:58.458 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:22:58.458 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:22:58.458 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:22:58.458 -08 000000099 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:22:58.458 -08 000000099 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:22:58.458 -08 000000099 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:22:58.459 -08 000000099 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:22:58.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:58.574 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:58.824 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:58.884 -08 000000066 INF: FPGA: Recv EX2MV
17-02-28 20:22:58.884 -08 000000066 INF: FPGA: Recv EX1MV
17-02-28 20:22:58.884 -08 000000099 INF: Excitation Filter 1: Moved -107 steps in 425.988 ms
17-02-28 20:22:58.884 -08 000000099 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 426.0826 ms
17-02-28 20:22:58.884 -08 000000099 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.1864 ms
17-02-28 20:22:58.884 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 426.2092 ms
17-02-28 20:22:58.884 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.4095 ms
17-02-28 20:22:58.884 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.4776 ms
17-02-28 20:22:58.884 -08 000000099 INF: ======================================
17-02-28 20:22:58.884 -08 000000039 INF: ======================================
17-02-28 20:22:58.885 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:58.885 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:58.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:22:58.887 -08 000000108 INF: ===================Camera TDI===================
17-02-28 20:22:58.887 -08 000000046 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:22:58.887 -08 000000059 INF: ===================FPGA Z Wait===================
17-02-28 20:22:58.887 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:22:58.888 -08 000000059 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:22:58.888 -08 000000091 INF: Y Motor: Moving to 14.9092 mm @6.500 mm/sec, started at 64.5576 mm
17-02-28 20:22:58.888 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:22:58.888 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:22:58.888 -08 000000108 INF: ===================Camera TDI, Parallel===================
17-02-28 20:22:58.888 -08 000000046 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:22:58.889 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:22:58.889 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:22:58.889 -08 000000046 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:22:58.891 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:58.891 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:58.891 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:58.891 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:58.951 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:22:58.951 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:22:58.951 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:22:59.013 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:22:59.013 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:22:59.041 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:59.041 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:59.041 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:59.041 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Set target position to 990924 encoder counts
17-02-28 20:22:59.075 -08 000000091 INF: Y Motor: Xmit s r0xca 990924\r
17-02-28 20:22:59.135 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:59.137 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:22:59.137 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:22:59.137 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:22:59.191 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:59.191 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:22:59.191 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:59.191 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:22:59.198 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:22:59.199 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:22:59.199 -08 000000091 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:22:59.199 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:59.259 -08 000000072 INF: FPGA: Recv ZWAIT 
17-02-28 20:22:59.259 -08 000000059 INF: ======================================
17-02-28 20:22:59.323 -08 000000091 INF: Y Motor: Unshifted Position: 5893903
17-02-28 20:22:59.341 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:59.341 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:22:59.341 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:59.341 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:22:59.341 -08 000000105 INF: ===================Camera #2 Frame #5===================
17-02-28 20:22:59.341 -08 000000058 INF: ===================Camera #0 Frame #5===================
17-02-28 20:22:59.373 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:59.448 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:22:59.501 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:59.506 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:22:59.506 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:22:59.506 -08 000000058 INF: ===================Camera #0 Frame #11===================
17-02-28 20:22:59.507 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:22:59.507 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:22:59.507 -08 000000105 INF: ===================Camera #2 Frame #11===================
17-02-28 20:22:59.511 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:22:59.511 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB1 (4)===================
17-02-28 20:22:59.511 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:22:59.636 -08 000000091 INF: Y Motor: Unshifted Position: 5690241
17-02-28 20:22:59.674 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:22:59.674 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:22:59.674 -08 000000058 INF: ===================Camera #0 Frame #17===================
17-02-28 20:22:59.676 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:22:59.676 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:22:59.676 -08 000000105 INF: ===================Camera #2 Frame #17===================
17-02-28 20:22:59.686 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:59.810 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:22:59.842 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:22:59.842 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:22:59.842 -08 000000058 INF: ===================Camera #0 Frame #23===================
17-02-28 20:22:59.845 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:22:59.845 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:22:59.845 -08 000000105 INF: ===================Camera #2 Frame #23===================
17-02-28 20:22:59.951 -08 000000091 INF: Y Motor: Unshifted Position: 5486579
17-02-28 20:23:00.001 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:00.010 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:23:00.010 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:23:00.010 -08 000000058 INF: ===================Camera #0 Frame #29===================
17-02-28 20:23:00.014 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:23:00.014 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:23:00.014 -08 000000105 INF: ===================Camera #2 Frame #29===================
17-02-28 20:23:00.123 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:00.179 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:23:00.179 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:23:00.179 -08 000000058 INF: ===================Camera #0 Frame #35===================
17-02-28 20:23:00.183 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:23:00.183 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:23:00.183 -08 000000105 INF: ===================Camera #2 Frame #35===================
17-02-28 20:23:00.259 -08 000000091 INF: Y Motor: Unshifted Position: 5283771
17-02-28 20:23:00.309 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:00.348 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:23:00.348 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:23:00.348 -08 000000058 INF: ===================Camera #0 Frame #42===================
17-02-28 20:23:00.352 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:23:00.352 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:23:00.352 -08 000000105 INF: ===================Camera #2 Frame #42===================
17-02-28 20:23:00.437 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:00.520 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:23:00.520 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:23:00.520 -08 000000058 INF: ===================Camera #0 Frame #48===================
17-02-28 20:23:00.525 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:23:00.525 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:23:00.525 -08 000000105 INF: ===================Camera #2 Frame #48===================
17-02-28 20:23:00.572 -08 000000091 INF: Y Motor: Unshifted Position: 5081399
17-02-28 20:23:00.611 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:23:00.622 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:00.689 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:23:00.689 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:23:00.689 -08 000000058 INF: ===================Camera #0 Frame #54===================
17-02-28 20:23:00.695 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:00.695 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:23:00.695 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:23:00.695 -08 000000105 INF: ===================Camera #2 Frame #54===================
17-02-28 20:23:00.746 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:00.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:00.822 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:00.858 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:23:00.858 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:23:00.858 -08 000000058 INF: ===================Camera #0 Frame #60===================
17-02-28 20:23:00.865 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:23:00.865 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:23:00.865 -08 000000105 INF: ===================Camera #2 Frame #61===================
17-02-28 20:23:00.883 -08 000000091 INF: Y Motor: Unshifted Position: 4877950
17-02-28 20:23:00.933 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.027 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:23:01.027 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:23:01.027 -08 000000058 INF: ===================Camera #0 Frame #67===================
17-02-28 20:23:01.038 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:23:01.038 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:23:01.038 -08 000000105 INF: ===================Camera #2 Frame #67===================
17-02-28 20:23:01.060 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.072 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:01.133 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:01.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:01.133 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:23:01.196 -08 000000091 INF: Y Motor: Unshifted Position: 4675802
17-02-28 20:23:01.199 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:23:01.199 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:23:01.199 -08 000000058 INF: ===================Camera #0 Frame #73===================
17-02-28 20:23:01.208 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:23:01.208 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:23:01.208 -08 000000105 INF: ===================Camera #2 Frame #73===================
17-02-28 20:23:01.246 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.368 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:23:01.368 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:23:01.368 -08 000000058 INF: ===================Camera #0 Frame #79===================
17-02-28 20:23:01.370 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.378 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:23:01.378 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:23:01.378 -08 000000105 INF: ===================Camera #2 Frame #79===================
17-02-28 20:23:01.509 -08 000000091 INF: Y Motor: Unshifted Position: 4472130
17-02-28 20:23:01.537 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:23:01.537 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:23:01.537 -08 000000058 INF: ===================Camera #0 Frame #85===================
17-02-28 20:23:01.548 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:23:01.548 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:23:01.548 -08 000000105 INF: ===================Camera #2 Frame #86===================
17-02-28 20:23:01.559 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.683 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.706 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:23:01.706 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:23:01.706 -08 000000058 INF: ===================Camera #0 Frame #92===================
17-02-28 20:23:01.721 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:23:01.721 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:23:01.721 -08 000000105 INF: ===================Camera #2 Frame #92===================
17-02-28 20:23:01.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:01.816 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:01.817 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:01.817 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:01.819 -08 000000091 INF: Y Motor: Unshifted Position: 4270414
17-02-28 20:23:01.869 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:01.879 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:23:01.879 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:23:01.879 -08 000000058 INF: ===================Camera #0 Frame #98===================
17-02-28 20:23:01.880 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:01.880 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent HB2 (5)===================
17-02-28 20:23:01.880 -08 000000018 INF: Valve A1: Go to position 5
17-02-28 20:23:01.880 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:23:01.892 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:23:01.892 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:23:01.892 -08 000000105 INF: ===================Camera #2 Frame #98===================
17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 4\r
17-02-28 20:23:01.946 -08 000000018 INF: Valve A1: 23.214 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:23:01.946 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 4 to 5
17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW5\r
17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:23:01.946 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:23:01.997 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.049 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:23:02.049 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:23:02.049 -08 000000058 INF: ===================Camera #0 Frame #104===================
17-02-28 20:23:02.063 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:23:02.063 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:23:02.063 -08 000000105 INF: ===================Camera #2 Frame #105===================
17-02-28 20:23:02.133 -08 000000091 INF: Y Motor: Unshifted Position: 4066306
17-02-28 20:23:02.183 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.194 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 5\r
17-02-28 20:23:02.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:02.194 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve===================
17-02-28 20:23:02.219 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:23:02.219 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:23:02.219 -08 000000058 INF: ===================Camera #0 Frame #110===================
17-02-28 20:23:02.237 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:23:02.237 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:23:02.237 -08 000000105 INF: ===================Camera #2 Frame #111===================
17-02-28 20:23:02.307 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.389 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:23:02.389 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:23:02.389 -08 000000058 INF: ===================Camera #0 Frame #117===================
17-02-28 20:23:02.408 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:23:02.408 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:23:02.408 -08 000000105 INF: ===================Camera #2 Frame #117===================
17-02-28 20:23:02.443 -08 000000091 INF: Y Motor: Unshifted Position: 3864588
17-02-28 20:23:02.493 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.562 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:23:02.562 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:23:02.562 -08 000000058 INF: ===================Camera #0 Frame #123===================
17-02-28 20:23:02.579 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:23:02.579 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:23:02.579 -08 000000105 INF: ===================Camera #2 Frame #124===================
17-02-28 20:23:02.621 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.689 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:02.690 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:02.690 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:02.731 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:23:02.731 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:23:02.731 -08 000000058 INF: ===================Camera #0 Frame #129===================
17-02-28 20:23:02.753 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:23:02.753 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:23:02.753 -08 000000105 INF: ===================Camera #2 Frame #130===================
17-02-28 20:23:02.756 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:02.757 -08 000000091 INF: Y Motor: Unshifted Position: 3660489
17-02-28 20:23:02.764 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:23:02.807 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:23:02.901 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:23:02.901 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:23:02.901 -08 000000058 INF: ===================Camera #0 Frame #136===================
17-02-28 20:23:02.924 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:23:02.924 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:23:02.924 -08 000000105 INF: ===================Camera #2 Frame #136===================
17-02-28 20:23:02.930 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:02.941 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:23:02.941 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:23:03.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:23:03.068 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:03.069 -08 000000091 INF: Y Motor: Unshifted Position: 3457476
17-02-28 20:23:03.074 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:23:03.074 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:23:03.074 -08 000000058 INF: ===================Camera #0 Frame #142===================
17-02-28 20:23:03.095 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:23:03.095 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:23:03.095 -08 000000105 INF: ===================Camera #2 Frame #143===================
17-02-28 20:23:03.119 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:03.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:03.243 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:03.244 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:23:03.244 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:23:03.244 -08 000000058 INF: ===================Camera #0 Frame #148===================
17-02-28 20:23:03.254 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:03.269 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:23:03.269 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:23:03.269 -08 000000105 INF: ===================Camera #2 Frame #149===================
17-02-28 20:23:03.379 -08 000000091 INF: Y Motor: Unshifted Position: 3254678
17-02-28 20:23:03.415 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:23:03.415 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:23:03.415 -08 000000058 INF: ===================Camera #0 Frame #154===================
17-02-28 20:23:03.429 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:03.440 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:23:03.440 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:23:03.440 -08 000000105 INF: ===================Camera #2 Frame #155===================
17-02-28 20:23:03.504 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:03.557 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:03.570 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:03.585 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:23:03.585 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:23:03.585 -08 000000058 INF: ===================Camera #0 Frame #161===================
17-02-28 20:23:03.611 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:23:03.611 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:23:03.611 -08 000000105 INF: ===================Camera #2 Frame #162===================
17-02-28 20:23:03.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:23:03.695 -08 000000091 INF: Y Motor: Unshifted Position: 3051229
17-02-28 20:23:03.745 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:03.754 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:03.759 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:23:03.759 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:23:03.759 -08 000000058 INF: ===================Camera #0 Frame #167===================
17-02-28 20:23:03.785 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:23:03.785 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:23:03.785 -08 000000105 INF: ===================Camera #2 Frame #168===================
17-02-28 20:23:03.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:03.869 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:03.930 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:23:03.930 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:23:03.930 -08 000000058 INF: ===================Camera #0 Frame #173===================
17-02-28 20:23:03.942 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:03.942 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Aspirating port PortB===================
17-02-28 20:23:03.956 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:23:03.956 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:23:03.956 -08 000000105 INF: ===================Camera #2 Frame #174===================
17-02-28 20:23:04.003 -08 000000091 INF: Y Motor: Unshifted Position: 2848870
17-02-28 20:23:04.042 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP7680R\r
17-02-28 20:23:04.053 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:04.100 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:23:04.100 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:23:04.100 -08 000000058 INF: ===================Camera #0 Frame #180===================
17-02-28 20:23:04.127 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:23:04.127 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:23:04.127 -08 000000105 INF: ===================Camera #2 Frame #181===================
17-02-28 20:23:04.128 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:04.179 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:04.228 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:04.274 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:23:04.274 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:23:04.274 -08 000000058 INF: ===================Camera #0 Frame #186===================
17-02-28 20:23:04.302 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:23:04.302 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:23:04.302 -08 000000105 INF: ===================Camera #2 Frame #187===================
17-02-28 20:23:04.314 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:04.315 -08 000000091 INF: Y Motor: Unshifted Position: 2647155
17-02-28 20:23:04.365 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:04.444 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:23:04.444 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:23:04.444 -08 000000058 INF: ===================Camera #0 Frame #192===================
17-02-28 20:23:04.473 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:23:04.473 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:23:04.473 -08 000000105 INF: ===================Camera #2 Frame #193===================
17-02-28 20:23:04.493 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:04.564 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:04.614 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:23:04.614 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:23:04.614 -08 000000058 INF: ===================Camera #0 Frame #199===================
17-02-28 20:23:04.628 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:04.630 -08 000000091 INF: Y Motor: Unshifted Position: 2444359
17-02-28 20:23:04.644 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:23:04.644 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:23:04.644 -08 000000105 INF: ===================Camera #2 Frame #200===================
17-02-28 20:23:04.680 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:04.785 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:23:04.785 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:23:04.785 -08 000000058 INF: ===================Camera #0 Frame #205===================
17-02-28 20:23:04.802 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:04.817 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:23:04.817 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:23:04.817 -08 000000105 INF: ===================Camera #2 Frame #206===================
17-02-28 20:23:04.878 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:04.940 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:04.941 -08 000000091 INF: Y Motor: Unshifted Position: 2240043
17-02-28 20:23:04.953 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:23:04.953 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:23:04.953 -08 000000058 INF: ===================Camera #0 Frame #211===================
17-02-28 20:23:04.988 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:23:04.988 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:23:04.988 -08 000000105 INF: ===================Camera #2 Frame #212===================
17-02-28 20:23:04.991 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.116 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.123 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:23:05.123 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:23:05.123 -08 000000058 INF: ===================Camera #0 Frame #217===================
17-02-28 20:23:05.159 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:23:05.159 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:23:05.159 -08 000000105 INF: ===================Camera #2 Frame #219===================
17-02-28 20:23:05.192 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:05.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:05.253 -08 000000091 INF: Y Motor: Unshifted Position: 2035721
17-02-28 20:23:05.294 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:23:05.294 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:23:05.294 -08 000000058 INF: ===================Camera #0 Frame #224===================
17-02-28 20:23:05.303 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.334 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:23:05.334 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:23:05.334 -08 000000105 INF: ===================Camera #2 Frame #225===================
17-02-28 20:23:05.426 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.468 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:23:05.468 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:23:05.468 -08 000000058 INF: ===================Camera #0 Frame #230===================
17-02-28 20:23:05.502 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:05.505 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:23:05.505 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:23:05.505 -08 000000105 INF: ===================Camera #2 Frame #231===================
17-02-28 20:23:05.563 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:05.564 -08 000000091 INF: Y Motor: Unshifted Position: 1834872
17-02-28 20:23:05.614 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.638 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:23:05.638 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:23:05.638 -08 000000058 INF: ===================Camera #0 Frame #236===================
17-02-28 20:23:05.676 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:23:05.676 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:23:05.676 -08 000000105 INF: ===================Camera #2 Frame #238===================
17-02-28 20:23:05.739 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.808 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:23:05.808 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:23:05.808 -08 000000058 INF: ===================Camera #0 Frame #243===================
17-02-28 20:23:05.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:05.851 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:23:05.851 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:23:05.851 -08 000000105 INF: ===================Camera #2 Frame #244===================
17-02-28 20:23:05.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:05.875 -08 000000091 INF: Y Motor: Unshifted Position: 1632717
17-02-28 20:23:05.925 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:05.982 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:23:05.982 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:23:05.982 -08 000000058 INF: ===================Camera #0 Frame #249===================
17-02-28 20:23:06.022 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:23:06.022 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:23:06.022 -08 000000105 INF: ===================Camera #2 Frame #250===================
17-02-28 20:23:06.053 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:06.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:06.152 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:23:06.152 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:23:06.152 -08 000000058 INF: ===================Camera #0 Frame #255===================
17-02-28 20:23:06.187 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:06.188 -08 000000091 INF: Y Motor: Unshifted Position: 1429052
17-02-28 20:23:06.193 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:23:06.193 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:23:06.193 -08 000000105 INF: ===================Camera #2 Frame #257===================
17-02-28 20:23:06.238 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:06.323 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:23:06.323 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:23:06.323 -08 000000058 INF: ===================Camera #0 Frame #262===================
17-02-28 20:23:06.366 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:06.369 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:23:06.369 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:23:06.369 -08 000000105 INF: ===================Camera #2 Frame #263===================
17-02-28 20:23:06.438 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:06.497 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:23:06.497 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:23:06.497 -08 000000058 INF: ===================Camera #0 Frame #268===================
17-02-28 20:23:06.501 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:06.502 -08 000000091 INF: Y Motor: Unshifted Position: 1227322
17-02-28 20:23:06.540 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:23:06.540 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:23:06.540 -08 000000105 INF: ===================Camera #2 Frame #270===================
17-02-28 20:23:06.552 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:06.625 -08 000000037 INF: FPGA: Recv TDIYWAIT
17-02-28 20:23:06.625 -08 000000046 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:06.626 -08 000000046 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:23:06.627 -08 000000033 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:23:06.627 -08 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:23:06.627 -08 000000033 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:23:06.627 -08 000000033 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:23:06.627 -08 000000033 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:23:06.628 -08 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:23:06.628 -08 000000033 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:23:06.628 -08 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:23:06.628 -08 000000045 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:23:06.634 -08 000000045 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:23:06.667 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:06.667 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:06.667 -08 000000058 INF: ===================Camera #0 Frame #272===================
17-02-28 20:23:06.676 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:06.680 -08 000000058 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:06.681 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:06.751 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:06.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:06.812 -08 000000091 INF: Y Motor: Unshifted Position: 1023230
17-02-28 20:23:06.844 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:23:06.844 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:06.844 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:06.844 -08 000000105 INF: ===================Camera #2 Frame #272===================
17-02-28 20:23:06.844 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:23:06.851 -08 000000105 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:06.852 -08 000000105 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:06.862 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:06.875 -08 000000058 INF: ======================================
17-02-28 20:23:06.997 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:23:06.997 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:23:06.997 -08 000000045 INF: Excitation Filter 2: Moved 107 steps in 369.0725 ms
17-02-28 20:23:06.997 -08 000000033 INF: Excitation Filter 1: Moved 107 steps in 369.3877 ms
17-02-28 20:23:06.997 -08 000000033 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.5302 ms
17-02-28 20:23:06.997 -08 000000033 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.6059 ms
17-02-28 20:23:06.997 -08 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.3649 ms
17-02-28 20:23:06.997 -08 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.759 ms
17-02-28 20:23:06.997 -08 000000033 INF: ======================================
17-02-28 20:23:06.998 -08 000000045 INF: ======================================
17-02-28 20:23:06.999 -08 000000091 INF: Y Motor: Unshifted Position: 990925
17-02-28 20:23:06.999 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:06.999 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:06.999 -08 000000046 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:07.000 -08 000000046 INF: ======================================
17-02-28 20:23:07.053 -08 000000105 INF: Camera #2 ReleaseBuffer
17-02-28 20:23:07.053 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:23:07.061 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:07.061 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:07.061 -08 000000091 INF: Y Motor: Moved to 14.9093 after 7861 ms
17-02-28 20:23:07.061 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:07.088 -08 000000105 INF: ======================================
17-02-28 20:23:07.089 -08 000000108 INF: ===================Camera TDI===================
17-02-28 20:23:07.090 -08 000000108 INF: ======================================
17-02-28 20:23:07.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:07.125 -08 000000091 INF: Y Motor: Recv v 4097\r
17-02-28 20:23:07.125 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:07.125 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:07.187 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:07.187 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:07.187 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: Recv v 134217728\r
17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:07.250 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:07.312 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:07.373 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:07.373 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:07.373 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:07.374 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:07.438 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:07.438 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:07.438 -08 000000091 INF: ======================================
17-02-28 20:23:07.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:07.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:07.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:07.441 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:23:07.498 -08 000000087 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:23:07.498 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:07.560 -08 000000023 INF: FPGA: Recv TDIYERD 1490925
17-02-28 20:23:07.560 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:23:07.622 -08 000000064 INF: FPGA: Recv ZADCR 35206
17-02-28 20:23:07.622 -08 000000042 INF: At scan end Y pos = 14.909 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:23:07.622 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:23:07.685 -08 000000083 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:23:07.685 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:23:07.685 -08 000000042 INF: TDIScan finished after 11899.1875 ms
17-02-28 20:23:07.685 -08 000000042 INF: Image[0]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm)
17-02-28 20:23:07.685 -08 000000042 INF: Image[2]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm)
17-02-28 20:23:07.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:07.688 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:07.722 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.627 um
17-02-28 20:23:07.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:07.723 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:23:07.747 -08 000000058 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:23:07.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:07.748 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:07.748 -08 000000033 INF: ===================Dither Clean Up Command===================
17-02-28 20:23:07.748 -08 000000073 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:23:07.748 -08 000000109 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:23:07.748 -08 000000074 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:23:07.748 -08 000000109 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:07.749 -08 000000073 INF: ======================================
17-02-28 20:23:07.749 -08 000000074 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:23:07.749 -08 000000074 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:23:07.749 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:07.749 -08 000000050 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:07.749 -08 000000109 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:07.750 -08 000000010 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:23:07.752 -08 000000050 INF: ===================LFT:Extracting coords===================
17-02-28 20:23:07.777 -08 000000050 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:07.778 -08 000000050 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:23:07.779 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:23:07.779 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:23:07.779 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:23:07.779 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:23:07.779 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:07.779 -08 000000104 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:07.779 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:07.779 -08 000000059 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:07.810 -08 000000023 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:07.810 -08 000000023 INF: FPGA: Recv ZSEL 
17-02-28 20:23:07.810 -08 000000010 INF: FPGA: Xmit ZDACW 40860\n
17-02-28 20:23:07.810 -08 000000074 INF: ======================================
17-02-28 20:23:07.812 -08 000000109 INF: Y Motor: Recv ok\r
17-02-28 20:23:07.812 -08 000000109 INF: ======================================
17-02-28 20:23:07.853 -08 000000078 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:07.853 -08 000000104 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:07.853 -08 000000108 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:07.854 -08 000000059 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:07.873 -08 000000095 INF: FPGA: Recv ZDACW 
17-02-28 20:23:07.874 -08 000000010 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:23:07.874 -08 000000010 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:23:07.933 -08 000000030 INF: FPGA: Recv TDIBB
17-02-28 20:23:07.933 -08 000000010 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:07.934 -08 000000010 INF: ======================================
17-02-28 20:23:07.998 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:08.005 -08 000000108 INF: LFT found best fwhm score 2.115592 in 152 ms
17-02-28 20:23:08.005 -08 000000078 INF: LFT found best fwhm score 2.000002 in 152 ms
17-02-28 20:23:08.005 -08 000000078 INF: LFT found good score at index 3969 with fwhm value 2.000002. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:3,T
17-02-28 20:23:08.005 -08 000000104 INF: LFT found best fwhm score 2.000046 in 152 ms
17-02-28 20:23:08.005 -08 000000108 INF: LFT found good score at index 7853 with fwhm value 2.115592. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T
17-02-28 20:23:08.005 -08 000000104 INF: LFT found good score at index 685 with fwhm value 2.000046. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:3,T
17-02-28 20:23:08.005 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:23:08.005 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:23:08.005 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:23:08.005 -08 000000059 INF: LFT found best fwhm score 2.00039 in 151 ms
17-02-28 20:23:08.005 -08 000000059 INF: LFT found good score at index 7581 with fwhm value 2.00039. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T
17-02-28 20:23:08.005 -08 000000078 INF: ======================================
17-02-28 20:23:08.005 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:23:08.005 -08 000000104 INF: ======================================
17-02-28 20:23:08.006 -08 000000108 INF: ======================================
17-02-28 20:23:08.006 -08 000000059 INF: ======================================
17-02-28 20:23:08.007 -08 000000050 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:08.007 -08 000000050 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:3,T
17-02-28 20:23:08.008 -08 000000050 INF: ======================================
17-02-28 20:23:08.009 -08 000000033 INF: ======================================
17-02-28 20:23:08.010 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.011 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:23:08.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Aspirating port PortB, Waiting for image analysis===================
17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Aspirating port PortB===================
17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:23:08.013 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 1 - X = 74.16164 Y = 39.76308===================
17-02-28 20:23:08.036 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:23:08.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:23:08.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:23:08.037 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:23:08.037 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:23:08.037 -08 000000042 INF: Transformed XStagePosition from 75.26964 mm to 75.2499730624259 mm.
17-02-28 20:23:08.049 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5572293553278 mm.
17-02-28 20:23:08.049 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3572293553278 mm.
17-02-28 20:23:08.049 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4479793553278 mm.
17-02-28 20:23:08.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:23:08.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:08.052 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -155.9 um, section = C_1
17-02-28 20:23:08.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:08.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:08.071 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:08.072 -08 000000078 INF: ===================MoveEmissionFilters===================
17-02-28 20:23:08.075 -08 000000105 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:08.075 -08 000000060 INF: ===================Move X,Y===================
17-02-28 20:23:08.076 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:08.076 -08 000000060 INF: ===================Move X,Y, Parallel===================
17-02-28 20:23:08.076 -08 000000105 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:08.077 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:23:08.077 -08 000000046 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:23:08.078 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:08.079 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:23:08.080 -08 000000047 INF: ===================Move X Motor without settling===================
17-02-28 20:23:08.080 -08 000000064 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:23:08.080 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:08.080 -08 000000047 INF: X Motor: Xmit PR VM\n
17-02-28 20:23:08.081 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:08.081 -08 000000064 INF: ======================================
17-02-28 20:23:08.082 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:08.083 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:23:08.083 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:08.083 -08 000000064 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:23:08.083 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:08.083 -08 000000077 INF: Y Motor: Moving to 64.5572 mm @25.000 mm/sec, started at 14.9093 mm
17-02-28 20:23:08.083 -08 000000064 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:23:08.083 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:08.083 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":3,"Tile":1101,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF192","HCSMMF216","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.084 -08 000000064 INF: ======================================
17-02-28 20:23:08.084 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:08.084 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:08.084 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:08.084 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:23:08.085 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:08.085 -08 000000058 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:23:08.085 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:08.085 -08 000000105 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:08.085 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:23:08.086 -08 000000064 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:23:08.086 -08 000000064 INF: ======================================
17-02-28 20:23:08.086 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:08.086 -08 000000105 INF: ======================================
17-02-28 20:23:08.087 -08 000000051 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:23:08.087 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:08.087 -08 000000051 INF: ======================================
17-02-28 20:23:08.088 -08 000000101 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:23:08.088 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:23:08.088 -08 000000105 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:23:08.088 -08 000000101 INF: ======================================
17-02-28 20:23:08.089 -08 000000105 INF: ======================================
17-02-28 20:23:08.089 -08 000000064 INF: ======================================
17-02-28 20:23:08.089 -08 000000051 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:23:08.090 -08 000000051 INF: ======================================
17-02-28 20:23:08.090 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:08.090 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:08.091 -08 000000087 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:08.091 -08 000000091 INF: ======================================
17-02-28 20:23:08.091 -08 000000104 INF: ======================================
17-02-28 20:23:08.092 -08 000000087 INF: ======================================
17-02-28 20:23:08.094 -08 000000078 INF: ======================================
17-02-28 20:23:08.124 -08 000000101 INF: FPGA: Recv ZSEL 
17-02-28 20:23:08.126 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:08.126 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:08.126 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:08.126 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:08.126 -08 000000058 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:23:08.126 -08 000000047 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:23:08.127 -08 000000047 INF: X Motor: Xmit PR VI\n
17-02-28 20:23:08.151 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":3,"Tile":1104,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF271","HCSMMF197","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.155 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":3,"Tile":1103,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF180","HCSMMF240","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.191 -08 000000037 INF: FPGA: Recv TDIBB
17-02-28 20:23:08.191 -08 000000058 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Moving to 75.2500 mm @15.000 mm/sec, started at 74.1465 mm
17-02-28 20:23:08.193 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:08.193 -08 000000058 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:23:08.193 -08 000000047 INF: X Motor: Xmit MA 6656\n
17-02-28 20:23:08.193 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:08.193 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:08.195 -08 000000058 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:23:08.195 -08 000000058 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:23:08.195 -08 000000058 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:23:08.213 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":3,"Tile":1102,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF233","HCSMMF225","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.215 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":3,"Tile":1107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF262","HCSMMF284","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.218 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":3,"Tile":1105,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF272","HCSMMF196","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.225 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":3,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF285","HCSMMF260","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.229 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":3,"Tile":1106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF255","HCSMMF278","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.230 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":3,"Tile":1110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF263","HCSMMF268","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.239 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":3,"Tile":1109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF273","HCSMMF247","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.241 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":3,"Tile":1113,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF287","HCSMMF230","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.242 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":3,"Tile":1114,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF184","HCSMMF266","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.242 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":3,"Tile":1115,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF275","HCSMMF189","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.243 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":3,"Tile":1111,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF213","HCSMMF194","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.244 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":3,"Tile":1112,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF223","HCSMMF246","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.245 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":3,"Tile":1119,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF204","HCSMMF280","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.246 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":3,"Tile":1117,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF251","HCSMMF226","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.246 -08 000000059 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:08.246 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:08.246 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":3,"Tile":1116,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF214","HCSMMF224","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.247 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":3,"Tile":1118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF274","HCSMMF177","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Set target position to 5955723 encoder counts
17-02-28 20:23:08.248 -08 000000077 INF: Y Motor: Xmit s r0xca 5955723\r
17-02-28 20:23:08.248 -08 000000058 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:23:08.248 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":3,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF265","HCSMMF259","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.248 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:08.249 -08 000000047 INF: X Motor: Recv MA 6656\r\n>
17-02-28 20:23:08.249 -08 000000047 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:23:08.249 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":3,"Tile":1123,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF212","HCSMMF176","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.250 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":3,"Tile":1121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF179","HCSMMF237","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.250 -08 000000058 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:23:08.250 -08 000000058 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:23:08.250 -08 000000058 INF: Z Motor: Arming to move to -0.1159 mm
17-02-28 20:23:08.250 -08 000000058 INF: FPGA: Xmit ZYT 6435723 4\n
17-02-28 20:23:08.250 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":3,"Tile":1124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF279","HCSMMF191","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.251 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":3,"Tile":1127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF200","HCSMMF198","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.252 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":3,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF286","HCSMMF249","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.254 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":3,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF258","HCSMMF188","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.255 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":3,"Tile":1122,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF264","HCSMMF199","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.256 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":3,"Tile":1126,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF227","HCSMMF261","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:08.257 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.264 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:23:08.308 -08 000000059 INF: FPGA: Recv ZYT 
17-02-28 20:23:08.308 -08 000000058 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490925 enc / 14.909 mm / ) = 6435723 enc / 64.357 mm
17-02-28 20:23:08.308 -08 000000058 INF: FPGA: Xmit ZARM 30374\n
17-02-28 20:23:08.310 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:08.310 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:23:08.310 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:08.321 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:08.353 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.353 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:23:08.370 -08 000000101 INF: FPGA: Recv ZARM
17-02-28 20:23:08.370 -08 000000058 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0165 ms
17-02-28 20:23:08.370 -08 000000058 INF: Z Motor: ArmAbsStepped took 119.8991 ms
17-02-28 20:23:08.370 -08 000000058 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:08.371 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:08.372 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:08.372 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:23:08.372 -08 000000077 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:23:08.372 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:08.373 -08 000000058 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:23:08.374 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:23:08.375 -08 000000058 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:23:08.376 -08 000000058 INF: ===================TDI Scan Setup===================
17-02-28 20:23:08.377 -08 000000058 INF: ======================================
17-02-28 20:23:08.393 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.398 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:23:08.475 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.480 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:23:08.498 -08 000000077 INF: Y Motor: Unshifted Position: 1074533
17-02-28 20:23:08.548 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:08.570 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.576 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:23:08.623 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:08.670 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:08.672 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:08.677 -08 000000050 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:23:08.677 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:23:08.677 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:08.683 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:08.692 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:08.694 -08 000000050 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:08.813 -08 000000077 INF: Y Motor: Unshifted Position: 1780088
17-02-28 20:23:08.863 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:08.872 -08 000000047 INF: X Motor: Xmit PR ER\n
17-02-28 20:23:08.933 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:08.934 -08 000000047 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:23:08.934 -08 000000047 INF: X Motor: Moved to 75.2500 after 685 ms
17-02-28 20:23:08.934 -08 000000047 INF: ======================================
17-02-28 20:23:08.969 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:23:08.984 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:08.997 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:09.121 -08 000000077 INF: Y Motor: Unshifted Position: 2563444
17-02-28 20:23:09.171 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:09.247 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:09.291 -08 000000050 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:23:09.291 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:23:09.291 -08 000000050 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:09.295 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:09.306 -08 000000050 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:09.308 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:09.308 -08 000000050 INF: ===================Camera Arm TDI===================
17-02-28 20:23:09.309 -08 000000050 INF: ======================================
17-02-28 20:23:09.310 -08 000000046 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:09.311 -08 000000046 INF: ======================================
17-02-28 20:23:09.434 -08 000000077 INF: Y Motor: Unshifted Position: 3340881
17-02-28 20:23:09.484 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:09.558 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:09.609 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:09.620 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:09.746 -08 000000077 INF: Y Motor: Unshifted Position: 4125954
17-02-28 20:23:09.796 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:09.870 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:09.920 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:09.931 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:09.931 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:09.931 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:09.932 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:23:09.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 5 of 5 seconds left===================
17-02-28 20:23:10.056 -08 000000077 INF: Y Motor: Unshifted Position: 4899235
17-02-28 20:23:10.106 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:10.233 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:10.370 -08 000000077 INF: Y Motor: Unshifted Position: 5683469
17-02-28 20:23:10.420 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:10.546 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:10.682 -08 000000077 INF: Y Motor: Unshifted Position: 5955725
17-02-28 20:23:10.682 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:10.682 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:10.745 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:23:10.745 -08 000000077 INF: Y Motor: Moved to 64.5573 after 2373 ms
17-02-28 20:23:10.745 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:10.807 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:23:10.807 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:10.807 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:10.869 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:23:10.869 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:10.869 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:10.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:10.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 4 of 5 seconds left===================
17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:10.933 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:10.993 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:11.056 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:11.056 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:11.056 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:11.117 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:11.117 -08 000000077 INF: ======================================
17-02-28 20:23:11.118 -08 000000060 INF: ===================Move X,Y===================
17-02-28 20:23:11.119 -08 000000060 INF: ======================================
17-02-28 20:23:11.120 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:11.121 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:11.121 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:23:11.121 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:23:11.182 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:23:11.182 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:23:11.242 -08 000000060 INF: FPGA: Recv ZFREQCL
17-02-28 20:23:11.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:23:11.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:11.243 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:11.304 -08 000000105 INF: FPGA: Recv TDIYERD 6455724
17-02-28 20:23:11.304 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455724 counts (64.557 mm)
17-02-28 20:23:11.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:11.305 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:11.306 -08 000000108 INF: ===================TDI FPGA Arm===================
17-02-28 20:23:11.306 -08 000000077 INF: ===================Set YMotor gains for scans===================
17-02-28 20:23:11.306 -08 000000077 INF: ======================================
17-02-28 20:23:11.306 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:11.307 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:23:11.307 -08 000000108 INF: FPGA: Xmit TDIYPOS 6344798\n
17-02-28 20:23:11.367 -08 000000082 INF: FPGA: Recv TDIYPOS
17-02-28 20:23:11.367 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:11.369 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:23:11.369 -08 000000108 INF: FPGA: Xmit TDIYARM3 139264 6435723 1 1\n
17-02-28 20:23:11.430 -08 000000037 INF: FPGA: Recv TDIYARM3
17-02-28 20:23:11.430 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:11.431 -08 000000108 INF: ===================TDI FPGA Arm===================
17-02-28 20:23:11.432 -08 000000108 INF: ======================================
17-02-28 20:23:11.433 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:11.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:11.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:11.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:11.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:11.436 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:23:11.436 -08 000000082 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:23:11.436 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:23:11.436 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:23:11.436 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:23:11.436 -08 000000082 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:23:11.436 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:23:11.436 -08 000000082 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:23:11.436 -08 000000082 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:23:11.440 -08 000000082 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:23:11.867 -08 000000047 INF: FPGA: Recv EX2MV
17-02-28 20:23:11.868 -08 000000047 INF: FPGA: Recv EX1MV
17-02-28 20:23:11.868 -08 000000082 INF: Excitation Filter 1: Moved -107 steps in 431.2373 ms
17-02-28 20:23:11.868 -08 000000082 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 431.4342 ms
17-02-28 20:23:11.868 -08 000000082 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.5391 ms
17-02-28 20:23:11.868 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 431.4186 ms
17-02-28 20:23:11.868 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 431.8319 ms
17-02-28 20:23:11.868 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.9106 ms
17-02-28 20:23:11.868 -08 000000082 INF: ======================================
17-02-28 20:23:11.868 -08 000000050 INF: ======================================
17-02-28 20:23:11.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:11.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:11.871 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:23:11.872 -08 000000059 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:11.872 -08 000000091 INF: ===================FPGA Z Wait===================
17-02-28 20:23:11.872 -08 000000046 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:11.872 -08 000000091 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:23:11.872 -08 000000046 INF: Y Motor: Moving to 14.9089 mm @6.500 mm/sec, started at 64.5573 mm
17-02-28 20:23:11.872 -08 000000046 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:11.872 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:11.872 -08 000000104 INF: ===================Camera TDI, Parallel===================
17-02-28 20:23:11.872 -08 000000059 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:23:11.873 -08 000000059 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:23:11.873 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:23:11.873 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:23:11.892 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:11.892 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:11.894 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:11.894 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:11.928 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:23:11.928 -08 000000046 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:11.928 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:11.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:11.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 3 of 5 seconds left===================
17-02-28 20:23:11.991 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:23:11.991 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:12.042 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:12.042 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:12.044 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:12.044 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Set target position to 990889 encoder counts
17-02-28 20:23:12.053 -08 000000046 INF: Y Motor: Xmit s r0xca 990889\r
17-02-28 20:23:12.118 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:23:12.118 -08 000000046 INF: Y Motor: Start the move command
17-02-28 20:23:12.118 -08 000000046 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:12.180 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:23:12.180 -08 000000046 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:23:12.180 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:12.192 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:12.192 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:12.194 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:12.194 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:12.240 -08 000000047 INF: FPGA: Recv ZWAIT 
17-02-28 20:23:12.240 -08 000000091 INF: ======================================
17-02-28 20:23:12.304 -08 000000046 INF: Y Motor: Unshifted Position: 5893872
17-02-28 20:23:12.342 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:12.342 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:12.342 -08 000000037 INF: ===================Camera #0 Frame #5===================
17-02-28 20:23:12.344 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:12.344 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:12.344 -08 000000095 INF: ===================Camera #2 Frame #5===================
17-02-28 20:23:12.354 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:12.478 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:12.514 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:23:12.514 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:23:12.514 -08 000000037 INF: ===================Camera #0 Frame #12===================
17-02-28 20:23:12.518 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:23:12.518 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:23:12.518 -08 000000095 INF: ===================Camera #2 Frame #12===================
17-02-28 20:23:12.617 -08 000000046 INF: Y Motor: Unshifted Position: 5692374
17-02-28 20:23:12.667 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:12.686 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:23:12.686 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:23:12.686 -08 000000037 INF: ===================Camera #0 Frame #18===================
17-02-28 20:23:12.701 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:23:12.701 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:23:12.701 -08 000000095 INF: ===================Camera #2 Frame #18===================
17-02-28 20:23:12.791 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:12.862 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:23:12.862 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:23:12.862 -08 000000037 INF: ===================Camera #0 Frame #24===================
17-02-28 20:23:12.870 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:23:12.870 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:23:12.870 -08 000000095 INF: ===================Camera #2 Frame #25===================
17-02-28 20:23:12.927 -08 000000046 INF: Y Motor: Unshifted Position: 5488711
17-02-28 20:23:12.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:12.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 2 of 5 seconds left===================
17-02-28 20:23:12.977 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.032 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:23:13.032 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:23:13.032 -08 000000037 INF: ===================Camera #0 Frame #31===================
17-02-28 20:23:13.044 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:23:13.044 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:23:13.044 -08 000000095 INF: ===================Camera #2 Frame #31===================
17-02-28 20:23:13.102 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.203 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:23:13.203 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:23:13.203 -08 000000037 INF: ===================Camera #0 Frame #37===================
17-02-28 20:23:13.222 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 37, frameCount = 38.
17-02-28 20:23:13.222 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 38
17-02-28 20:23:13.222 -08 000000095 INF: ===================Camera #2 Frame #38===================
17-02-28 20:23:13.241 -08 000000046 INF: Y Motor: Unshifted Position: 5286558
17-02-28 20:23:13.291 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.371 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:23:13.371 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:23:13.371 -08 000000037 INF: ===================Camera #0 Frame #43===================
17-02-28 20:23:13.405 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:23:13.405 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:23:13.405 -08 000000095 INF: ===================Camera #2 Frame #44===================
17-02-28 20:23:13.415 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.539 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:23:13.539 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:23:13.539 -08 000000037 INF: ===================Camera #0 Frame #49===================
17-02-28 20:23:13.551 -08 000000046 INF: Y Motor: Unshifted Position: 5082883
17-02-28 20:23:13.584 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:23:13.584 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:23:13.584 -08 000000095 INF: ===================Camera #2 Frame #51===================
17-02-28 20:23:13.601 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.715 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:23:13.715 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:23:13.715 -08 000000037 INF: ===================Camera #0 Frame #56===================
17-02-28 20:23:13.725 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.768 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 57, frameCount = 58.
17-02-28 20:23:13.768 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 58
17-02-28 20:23:13.768 -08 000000095 INF: ===================Camera #2 Frame #58===================
17-02-28 20:23:13.864 -08 000000046 INF: Y Motor: Unshifted Position: 4879217
17-02-28 20:23:13.895 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:23:13.895 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:23:13.895 -08 000000037 INF: ===================Camera #0 Frame #62===================
17-02-28 20:23:13.914 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:13.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:13.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Delay 1 of 5 seconds left===================
17-02-28 20:23:13.942 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:23:13.942 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:23:13.942 -08 000000095 INF: ===================Camera #2 Frame #64===================
17-02-28 20:23:14.038 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.073 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:23:14.073 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:23:14.073 -08 000000037 INF: ===================Camera #0 Frame #69===================
17-02-28 20:23:14.121 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71.
17-02-28 20:23:14.121 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71
17-02-28 20:23:14.121 -08 000000095 INF: ===================Camera #2 Frame #71===================
17-02-28 20:23:14.177 -08 000000046 INF: Y Motor: Unshifted Position: 4677717
17-02-28 20:23:14.227 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.254 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:23:14.254 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:23:14.254 -08 000000037 INF: ===================Camera #0 Frame #76===================
17-02-28 20:23:14.293 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:23:14.293 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:23:14.293 -08 000000095 INF: ===================Camera #2 Frame #77===================
17-02-28 20:23:14.351 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.428 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:23:14.428 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:23:14.428 -08 000000037 INF: ===================Camera #0 Frame #82===================
17-02-28 20:23:14.471 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84.
17-02-28 20:23:14.471 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84
17-02-28 20:23:14.471 -08 000000095 INF: ===================Camera #2 Frame #84===================
17-02-28 20:23:14.489 -08 000000046 INF: Y Motor: Unshifted Position: 4474040
17-02-28 20:23:14.539 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.598 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:23:14.598 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:23:14.598 -08 000000037 INF: ===================Camera #0 Frame #88===================
17-02-28 20:23:14.643 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:23:14.643 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:23:14.643 -08 000000095 INF: ===================Camera #2 Frame #90===================
17-02-28 20:23:14.661 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.766 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:23:14.766 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:23:14.766 -08 000000037 INF: ===================Camera #0 Frame #94===================
17-02-28 20:23:14.800 -08 000000046 INF: Y Motor: Unshifted Position: 4270598
17-02-28 20:23:14.813 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:23:14.813 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:23:14.813 -08 000000095 INF: ===================Camera #2 Frame #96===================
17-02-28 20:23:14.850 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:14.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:14.932 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:23:14.932 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:14.934 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:23:14.934 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:23:14.934 -08 000000037 INF: ===================Camera #0 Frame #101===================
17-02-28 20:23:14.974 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:14.982 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:23:14.982 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:23:14.982 -08 000000095 INF: ===================Camera #2 Frame #102===================
17-02-28 20:23:15.031 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:23:15.105 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:23:15.105 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:23:15.105 -08 000000037 INF: ===================Camera #0 Frame #107===================
17-02-28 20:23:15.110 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:23:15.110 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:23:15.111 -08 000000046 INF: Y Motor: Unshifted Position: 4068439
17-02-28 20:23:15.151 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:23:15.151 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:23:15.151 -08 000000095 INF: ===================Camera #2 Frame #109===================
17-02-28 20:23:15.161 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:15.210 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:23:15.273 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:23:15.273 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:23:15.273 -08 000000037 INF: ===================Camera #0 Frame #113===================
17-02-28 20:23:15.286 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:15.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF)
17-02-28 20:23:15.299 -08 000000018 INF: Current Position of Pump is: 7680
17-02-28 20:23:15.299 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5), Dispensing port PortC===================
17-02-28 20:23:15.323 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:23:15.323 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:23:15.323 -08 000000095 INF: ===================Camera #2 Frame #115===================
17-02-28 20:23:15.399 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD7680R\r
17-02-28 20:23:15.424 -08 000000046 INF: Y Motor: Unshifted Position: 3864776
17-02-28 20:23:15.442 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:23:15.442 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:23:15.442 -08 000000037 INF: ===================Camera #0 Frame #119===================
17-02-28 20:23:15.474 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:15.485 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:15.492 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:23:15.492 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:23:15.492 -08 000000095 INF: ===================Camera #2 Frame #121===================
17-02-28 20:23:15.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:15.598 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:15.610 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:23:15.610 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:23:15.610 -08 000000037 INF: ===================Camera #0 Frame #126===================
17-02-28 20:23:15.661 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:23:15.661 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:23:15.661 -08 000000095 INF: ===================Camera #2 Frame #127===================
17-02-28 20:23:15.671 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:15.738 -08 000000046 INF: Y Motor: Unshifted Position: 3663272
17-02-28 20:23:15.782 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:23:15.782 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:23:15.782 -08 000000037 INF: ===================Camera #0 Frame #132===================
17-02-28 20:23:15.788 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:15.830 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:23:15.830 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:23:15.830 -08 000000095 INF: ===================Camera #2 Frame #134===================
17-02-28 20:23:15.911 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:15.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:15.951 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:23:15.951 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:23:15.951 -08 000000037 INF: ===================Camera #0 Frame #138===================
17-02-28 20:23:15.984 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:16.003 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:23:16.003 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:23:16.003 -08 000000095 INF: ===================Camera #2 Frame #140===================
17-02-28 20:23:16.047 -08 000000046 INF: Y Motor: Unshifted Position: 3459609
17-02-28 20:23:16.097 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:16.120 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:23:16.120 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:23:16.120 -08 000000037 INF: ===================Camera #0 Frame #144===================
17-02-28 20:23:16.172 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:23:16.172 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:23:16.172 -08 000000095 INF: ===================Camera #2 Frame #146===================
17-02-28 20:23:16.223 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:16.234 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:16.290 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:23:16.290 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:23:16.290 -08 000000037 INF: ===================Camera #0 Frame #151===================
17-02-28 20:23:16.298 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:16.342 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:23:16.342 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:23:16.342 -08 000000095 INF: ===================Camera #2 Frame #152===================
17-02-28 20:23:16.361 -08 000000046 INF: Y Motor: Unshifted Position: 3255942
17-02-28 20:23:16.411 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:16.461 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:23:16.461 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:23:16.461 -08 000000037 INF: ===================Camera #0 Frame #157===================
17-02-28 20:23:16.511 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:23:16.511 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:23:16.511 -08 000000095 INF: ===================Camera #2 Frame #159===================
17-02-28 20:23:16.535 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:16.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:16.609 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:16.629 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:23:16.629 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:23:16.629 -08 000000037 INF: ===================Camera #0 Frame #163===================
17-02-28 20:23:16.674 -08 000000046 INF: Y Motor: Unshifted Position: 3054448
17-02-28 20:23:16.683 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:23:16.683 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:23:16.683 -08 000000095 INF: ===================Camera #2 Frame #165===================
17-02-28 20:23:16.724 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:16.798 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:23:16.798 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:23:16.798 -08 000000037 INF: ===================Camera #0 Frame #169===================
17-02-28 20:23:16.848 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:16.852 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:23:16.852 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:23:16.852 -08 000000095 INF: ===================Camera #2 Frame #171===================
17-02-28 20:23:16.859 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:16.921 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:16.921 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent HB2 (5)===================
17-02-28 20:23:16.921 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:23:16.966 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:23:16.966 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:23:16.966 -08 000000037 INF: ===================Camera #0 Frame #175===================
17-02-28 20:23:16.986 -08 000000046 INF: Y Motor: Unshifted Position: 2851002
17-02-28 20:23:17.021 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:23:17.021 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:23:17.021 -08 000000095 INF: ===================Camera #2 Frame #177===================
17-02-28 20:23:17.036 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.134 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:23:17.134 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:23:17.134 -08 000000037 INF: ===================Camera #0 Frame #182===================
17-02-28 20:23:17.158 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.190 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:23:17.190 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:23:17.190 -08 000000095 INF: ===================Camera #2 Frame #184===================
17-02-28 20:23:17.297 -08 000000046 INF: Y Motor: Unshifted Position: 2647335
17-02-28 20:23:17.305 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:23:17.305 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:23:17.305 -08 000000037 INF: ===================Camera #0 Frame #188===================
17-02-28 20:23:17.347 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.362 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:23:17.362 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:23:17.362 -08 000000095 INF: ===================Camera #2 Frame #190===================
17-02-28 20:23:17.471 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.473 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:23:17.473 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:23:17.473 -08 000000037 INF: ===================Camera #0 Frame #194===================
17-02-28 20:23:17.531 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:23:17.531 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:23:17.531 -08 000000095 INF: ===================Camera #2 Frame #196===================
17-02-28 20:23:17.607 -08 000000046 INF: Y Motor: Unshifted Position: 2445838
17-02-28 20:23:17.641 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:23:17.641 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:23:17.641 -08 000000037 INF: ===================Camera #0 Frame #200===================
17-02-28 20:23:17.657 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.700 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:23:17.700 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:23:17.700 -08 000000095 INF: ===================Camera #2 Frame #202===================
17-02-28 20:23:17.784 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.809 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:23:17.809 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:23:17.809 -08 000000037 INF: ===================Camera #0 Frame #206===================
17-02-28 20:23:17.869 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:23:17.869 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:23:17.869 -08 000000095 INF: ===================Camera #2 Frame #209===================
17-02-28 20:23:17.920 -08 000000046 INF: Y Motor: Unshifted Position: 2242179
17-02-28 20:23:17.970 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:17.977 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:23:17.977 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:23:17.977 -08 000000037 INF: ===================Camera #0 Frame #213===================
17-02-28 20:23:18.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:23:18.041 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:23:18.041 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:23:18.041 -08 000000095 INF: ===================Camera #2 Frame #215===================
17-02-28 20:23:18.094 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:18.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:18.161 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:23:18.161 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:23:18.163 -08 000000037 INF: ===================Camera #0 Frame #219===================
17-02-28 20:23:18.208 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:18.210 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:23:18.210 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:23:18.210 -08 000000095 INF: ===================Camera #2 Frame #221===================
17-02-28 20:23:18.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:18.233 -08 000000046 INF: Y Motor: Unshifted Position: 2038725
17-02-28 20:23:18.283 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:18.333 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:23:18.333 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:23:18.333 -08 000000037 INF: ===================Camera #0 Frame #226===================
17-02-28 20:23:18.379 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:23:18.379 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:23:18.379 -08 000000095 INF: ===================Camera #2 Frame #227===================
17-02-28 20:23:18.407 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:18.482 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:18.504 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:23:18.504 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:23:18.504 -08 000000037 INF: ===================Camera #0 Frame #232===================
17-02-28 20:23:18.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:18.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:18.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve===================
17-02-28 20:23:18.543 -08 000000046 INF: Y Motor: Unshifted Position: 1837007
17-02-28 20:23:18.548 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:23:18.548 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:23:18.548 -08 000000095 INF: ===================Camera #2 Frame #234===================
17-02-28 20:23:18.593 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:18.672 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:23:18.672 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:23:18.672 -08 000000037 INF: ===================Camera #0 Frame #238===================
17-02-28 20:23:18.720 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:18.720 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:23:18.720 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:23:18.720 -08 000000095 INF: ===================Camera #2 Frame #240===================
17-02-28 20:23:18.840 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:23:18.840 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:23:18.840 -08 000000037 INF: ===================Camera #0 Frame #244===================
17-02-28 20:23:18.858 -08 000000046 INF: Y Motor: Unshifted Position: 1632680
17-02-28 20:23:18.889 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:23:18.889 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:23:18.889 -08 000000095 INF: ===================Camera #2 Frame #246===================
17-02-28 20:23:18.908 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:18.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:18.915 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:18.916 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Buffer Wash===================
17-02-28 20:23:18.916 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle===================
17-02-28 20:23:18.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:18.917 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:23:18.918 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:23:18.919 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°, FC temperature to 60°===================
17-02-28 20:23:19.008 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:23:19.008 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:23:19.008 -08 000000037 INF: ===================Camera #0 Frame #251===================
17-02-28 20:23:19.030 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:19.059 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:23:19.059 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:23:19.059 -08 000000095 INF: ===================Camera #2 Frame #252===================
17-02-28 20:23:19.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:23:19.164 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:23:19.165 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:23:19.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 60°===================
17-02-28 20:23:19.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:19.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:19.167 -08 000000046 INF: Y Motor: Unshifted Position: 1431184
17-02-28 20:23:19.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:19.167 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:19.179 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:23:19.179 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:23:19.179 -08 000000037 INF: ===================Camera #0 Frame #257===================
17-02-28 20:23:19.217 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:19.228 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:23:19.228 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:23:19.228 -08 000000095 INF: ===================Camera #2 Frame #259===================
17-02-28 20:23:19.232 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:19.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:23:19.232 -08 000000018 INF: Valve A1: Go to position 1
17-02-28 20:23:19.232 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 5\r
17-02-28 20:23:19.293 -08 000000018 INF: Valve A1: 17.345 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:23:19.293 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 5 to 1
17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC1\r
17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:23:19.293 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:23:19.344 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:19.349 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:23:19.349 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:23:19.349 -08 000000037 INF: ===================Camera #0 Frame #263===================
17-02-28 20:23:19.401 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:23:19.401 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:23:19.401 -08 000000095 INF: ===================Camera #2 Frame #265===================
17-02-28 20:23:19.480 -08 000000046 INF: Y Motor: Unshifted Position: 1227499
17-02-28 20:23:19.518 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:23:19.518 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:23:19.518 -08 000000037 INF: ===================Camera #0 Frame #269===================
17-02-28 20:23:19.530 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:19.572 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:23:19.572 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:23:19.572 -08 000000095 INF: ===================Camera #2 Frame #271===================
17-02-28 20:23:19.602 -08 000000078 INF: FPGA: Recv TDIYWAIT
17-02-28 20:23:19.602 -08 000000059 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:19.604 -08 000000059 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:23:19.605 -08 000000101 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:23:19.605 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:23:19.605 -08 000000101 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:23:19.605 -08 000000101 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:23:19.605 -08 000000101 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:23:19.605 -08 000000101 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:23:19.605 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:23:19.605 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:23:19.605 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:23:19.606 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:23:19.654 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:19.687 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:19.687 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:19.687 -08 000000037 INF: ===================Camera #0 Frame #272===================
17-02-28 20:23:19.697 -08 000000037 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:19.698 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:19.794 -08 000000046 INF: Y Motor: Unshifted Position: 1024060
17-02-28 20:23:19.831 -08 000000037 INF: Camera #0 ReleaseBuffer
17-02-28 20:23:19.831 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:19.831 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:19.831 -08 000000095 INF: ===================Camera #2 Frame #272===================
17-02-28 20:23:19.831 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:23:19.835 -08 000000095 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:19.836 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:19.844 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:19.854 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-02-28 20:23:19.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:19.854 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:23:19.860 -08 000000037 INF: ======================================
17-02-28 20:23:19.977 -08 000000058 INF: FPGA: Recv EX1MV
17-02-28 20:23:19.977 -08 000000101 INF: Excitation Filter 1: Moved 107 steps in 371.7949 ms
17-02-28 20:23:19.977 -08 000000101 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.912 ms
17-02-28 20:23:19.977 -08 000000101 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.0967 ms
17-02-28 20:23:19.977 -08 000000101 INF: ======================================
17-02-28 20:23:19.979 -08 000000046 INF: Y Motor: Unshifted Position: 990888
17-02-28 20:23:19.979 -08 000000046 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:19.979 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:20.014 -08 000000095 INF: Camera #2 ReleaseBuffer
17-02-28 20:23:20.014 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:23:20.043 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:23:20.043 -08 000000046 INF: Y Motor: Moved to 14.9089 after 7862 ms
17-02-28 20:23:20.043 -08 000000046 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:20.044 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:23:20.044 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 438.8365 ms
17-02-28 20:23:20.044 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 438.9474 ms
17-02-28 20:23:20.044 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 439.3329 ms
17-02-28 20:23:20.045 -08 000000082 INF: ======================================
17-02-28 20:23:20.046 -08 000000059 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:20.047 -08 000000059 INF: ======================================
17-02-28 20:23:20.049 -08 000000095 INF: ======================================
17-02-28 20:23:20.050 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:23:20.051 -08 000000104 INF: ======================================
17-02-28 20:23:20.103 -08 000000046 INF: Y Motor: Recv v 4097\r
17-02-28 20:23:20.103 -08 000000046 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:20.103 -08 000000046 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:20.168 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:23:20.168 -08 000000046 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:20.168 -08 000000046 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: Recv v 134217728\r
17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:20.230 -08 000000046 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: Recv v 0\r
17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:20.294 -08 000000046 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:20.354 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:23:20.354 -08 000000046 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:20.354 -08 000000046 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:20.418 -08 000000046 INF: Y Motor: Recv ok\r
17-02-28 20:23:20.418 -08 000000046 INF: ======================================
17-02-28 20:23:20.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:20.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:20.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.421 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:23:20.476 -08 000000069 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:23:20.476 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:20.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:20.539 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:20.540 -08 000000066 INF: FPGA: Recv TDIYERD 1490889
17-02-28 20:23:20.541 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:23:20.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:20.603 -08 000000085 INF: FPGA: Recv ZADCR 35359
17-02-28 20:23:20.603 -08 000000042 INF: At scan end Y pos = 14.909 and Z pos = -0.135. Y moved -48.539 mm
17-02-28 20:23:20.603 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:23:20.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:20.612 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 50, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:23:20.665 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:23:20.665 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:23:20.665 -08 000000042 INF: TDIScan finished after 12627.0509 ms
17-02-28 20:23:20.665 -08 000000042 INF: Image[0]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm)
17-02-28 20:23:20.665 -08 000000042 INF: Image[2]: Y should trigger at 63.448 mm, 2nd row was at 64.357 mm (error = 0.909 mm)
17-02-28 20:23:20.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.701 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.521 um
17-02-28 20:23:20.701 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.702 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:23:20.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:23:20.727 -08 000000058 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:23:20.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.728 -08 000000062 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:23:20.728 -08 000000064 INF: ===================Dither Clean Up Command===================
17-02-28 20:23:20.728 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:23:20.729 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:23:20.729 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:23:20.729 -08 000000062 INF: ======================================
17-02-28 20:23:20.729 -08 000000104 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:23:20.729 -08 000000104 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:20.729 -08 000000104 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:20.729 -08 000000095 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:20.730 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:20.730 -08 000000066 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:23:20.733 -08 000000095 INF: ===================LFT:Extracting coords===================
17-02-28 20:23:20.758 -08 000000095 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:20.759 -08 000000095 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:23:20.759 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.760 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.760 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.760 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.760 -08 000000059 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:20.760 -08 000000060 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:20.760 -08 000000105 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:20.760 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:20.790 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:23:20.790 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:23:20.791 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:23:20.791 -08 000000104 INF: ======================================
17-02-28 20:23:20.791 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:20.791 -08 000000033 INF: FPGA: Recv ZSEL 
17-02-28 20:23:20.792 -08 000000066 INF: FPGA: Xmit ZDACW 40860\n
17-02-28 20:23:20.792 -08 000000051 INF: ======================================
17-02-28 20:23:20.834 -08 000000059 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:20.834 -08 000000060 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:20.834 -08 000000105 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:20.834 -08 000000087 INF: FC:B, C:3,L:3, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:20.851 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:23:20.852 -08 000000066 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:23:20.852 -08 000000066 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:23:20.890 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:23:20.913 -08 000000030 INF: FPGA: Recv TDIBB
17-02-28 20:23:20.913 -08 000000066 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:20.914 -08 000000066 INF: ======================================
17-02-28 20:23:20.976 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:20.985 -08 000000060 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:23:20.985 -08 000000060 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.157453930538226 in the next cycle, cycle 4 FC:B, C:3,L:3,T
17-02-28 20:23:20.985 -08 000000059 INF: LFT found best fwhm score 2.00003 in 151 ms
17-02-28 20:23:20.985 -08 000000059 INF: LFT found good score at index 1821 with fwhm value 2.00003. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:3,T
17-02-28 20:23:20.985 -08 000000087 INF: LFT found best fwhm score 2.120251 in 151 ms
17-02-28 20:23:20.985 -08 000000087 INF: LFT found good score at index 7185 with fwhm value 2.120251. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T
17-02-28 20:23:20.986 -08 000000105 INF: LFT found best fwhm score 2.000003 in 152 ms
17-02-28 20:23:20.986 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.986 -08 000000105 INF: LFT found good score at index 7381 with fwhm value 2.000003. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:3,T
17-02-28 20:23:20.986 -08 000000060 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.986 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.986 -08 000000105 INF: ===================LookupFocusTracking===================
17-02-28 20:23:20.986 -08 000000059 INF: ======================================
17-02-28 20:23:20.986 -08 000000060 INF: ======================================
17-02-28 20:23:20.986 -08 000000087 INF: ======================================
17-02-28 20:23:20.986 -08 000000105 INF: ======================================
17-02-28 20:23:20.987 -08 000000095 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:20.988 -08 000000095 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:3,T
17-02-28 20:23:20.988 -08 000000095 INF: ======================================
17-02-28 20:23:20.989 -08 000000064 INF: ======================================
17-02-28 20:23:20.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:23:20.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:23:20.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:20.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:23:20.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:23:20.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3, Swath 2 - X = 75.26964 Y = 39.76308===================
17-02-28 20:23:21.017 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:23:21.017 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:23:21.017 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:23:21.018 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:23:21.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 3===================
17-02-28 20:23:21.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:23:21.062 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":3,"Tile":1201,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF264","HCSMMF220","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.068 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:21.068 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:21.115 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:21.163 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":3,"Tile":1206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF284","HCSMMF217","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.167 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:23:21.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:21.179 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.180 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:23:21.180 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:23:21.182 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":3,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF270","HCSMMF255","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.293 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":3,"Tile":1204,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF278","HCSMMF232","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.298 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":3,"Tile":1205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF188","HCSMMF213","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.302 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":3,"Tile":1209,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF211","HCSMMF224","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.304 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":3,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF207","HCSMMF235","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.307 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":3,"Tile":1208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF242","HCSMMF180","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.311 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":3,"Tile":1210,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF252","HCSMMF209","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.313 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":3,"Tile":1212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF185","HCSMMF268","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.314 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":3,"Tile":1207,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF201","HCSMMF240","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.315 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":3,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF259","HCSMMF184","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.315 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":3,"Tile":1213,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF226","HCSMMF253","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.316 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":3,"Tile":1218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF187","HCSMMF202","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.317 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":3,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF251","HCSMMF203","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.317 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":3,"Tile":1220,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF281","HCSMMF272","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.318 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":3,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF189","HCSMMF192","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.319 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":3,"Tile":1216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF218","HCSMMF179","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.320 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":3,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF269","HCSMMF277","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.322 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":3,"Tile":1225,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF183","HCSMMF274","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.323 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":3,"Tile":1226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF231","HCSMMF195","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.326 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":3,"Tile":1221,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF222","HCSMMF208","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.327 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":3,"Tile":1215,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF239","HCSMMF178","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.328 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":3,"Tile":1223,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF182","HCSMMF279","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.329 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":3,"Tile":1228,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF282","HCSMMF176","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.330 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":3,"Tile":1222,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF198","HCSMMF254","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.331 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":3,"Tile":1224,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF246","HCSMMF197","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.333 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":3,"Tile":1227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF206","HCSMMF229","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:21.335 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.341 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:23:21.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:21.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:21.577 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:23:21.582 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.582 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:23:21.600 -08 000000098 INF: FPGA: Recv MIOCOMPR
17-02-28 20:23:21.600 -08 000000042 INF: Compensator: Moved OutOfPath in 420 ms
17-02-28 20:23:21.600 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:23:21.601 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.602 -08 000000010 INF: ===================Move Tilt Motor 1===================
17-02-28 20:23:21.603 -08 000000064 INF: ===================Move Tilt Motor 3===================
17-02-28 20:23:21.603 -08 000000035 INF: ===================Move Tilt Motor 2===================
17-02-28 20:23:21.603 -08 000000064 INF: ======================================
17-02-28 20:23:21.603 -08 000000010 INF: ======================================
17-02-28 20:23:21.604 -08 000000035 INF: ======================================
17-02-28 20:23:21.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:21.612 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:23:21.620 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:23:21.620 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:23:21.620 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:23:21.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:21.621 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:21.622 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.627 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:23:21.628 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:23:21.628 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:23:21.628 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:23:21.662 -08 000000037 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:21.662 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:21.663 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:21.663 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:23:21.663 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1559 mm
17-02-28 20:23:21.663 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:23:21.720 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.725 -08 000000072 INF: FPGA: Recv ZTRG 
17-02-28 20:23:21.726 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:23:21.726 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:23:21.763 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:21.786 -08 000000091 INF: FPGA: Recv ZYT 
17-02-28 20:23:21.786 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:23:21.786 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:23:21.811 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.817 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:23:21.848 -08 000000085 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:23:21.848 -08 000000085 INF: FPGA: Recv ZMV 
17-02-28 20:23:21.848 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:23:21.848 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9705 ms
17-02-28 20:23:21.848 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:23:21.849 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:21.849 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:23:21.911 -08 000000064 INF: FPGA: Recv ZDACR 60292
17-02-28 20:23:21.911 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.296 ms w/comms
17-02-28 20:23:21.911 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:23:21.911 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.4659 ms
17-02-28 20:23:21.911 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:21.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:21.912 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:23:21.920 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:23:21.920 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:21.920 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:21.920 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:23:21.920 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:23:21.949 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP9600R\r
17-02-28 20:23:21.975 -08 000000066 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:21.996 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:21.996 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:23:22.004 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:23:22.005 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:22.005 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:22.007 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:23:22.007 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:22.008 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:22.009 -08 000000064 INF: ===================MoveEmissionFilters===================
17-02-28 20:23:22.009 -08 000000023 INF: ===================Move X,Y===================
17-02-28 20:23:22.010 -08 000000023 INF: ===================Move X,Y, Parallel===================
17-02-28 20:23:22.010 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:22.010 -08 000000062 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:22.010 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:22.010 -08 000000099 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:22.011 -08 000000085 INF: ===================Move X Motor without settling===================
17-02-28 20:23:22.011 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:22.011 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:22.011 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:22.011 -08 000000085 INF: X Motor: Xmit PR VM\n
17-02-28 20:23:22.011 -08 000000099 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:22.011 -08 000000091 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9089 mm
17-02-28 20:23:22.011 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:22.011 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:22.012 -08 000000101 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:23:22.012 -08 000000109 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:23:22.012 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:23:22.012 -08 000000060 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:23:22.012 -08 000000072 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:23:22.012 -08 000000073 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:23:22.012 -08 000000101 INF: ======================================
17-02-28 20:23:22.012 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:23:22.012 -08 000000060 INF: ======================================
17-02-28 20:23:22.013 -08 000000072 INF: ======================================
17-02-28 20:23:22.013 -08 000000105 INF: ======================================
17-02-28 20:23:22.013 -08 000000109 INF: ======================================
17-02-28 20:23:22.013 -08 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:22.013 -08 000000062 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:22.014 -08 000000108 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:23:22.014 -08 000000045 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:23:22.014 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:22.015 -08 000000045 INF: ======================================
17-02-28 20:23:22.015 -08 000000078 INF: ======================================
17-02-28 20:23:22.015 -08 000000073 INF: ======================================
17-02-28 20:23:22.016 -08 000000108 INF: ======================================
17-02-28 20:23:22.016 -08 000000095 INF: ======================================
17-02-28 20:23:22.017 -08 000000099 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:22.017 -08 000000062 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:22.018 -08 000000099 INF: ======================================
17-02-28 20:23:22.018 -08 000000062 INF: ======================================
17-02-28 20:23:22.019 -08 000000064 INF: ======================================
17-02-28 20:23:22.038 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:22.039 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:22.039 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:22.039 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:22.100 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:22.100 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:22.101 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:23:22.101 -08 000000085 INF: X Motor: Xmit PR VI\n
17-02-28 20:23:22.138 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:22.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:23:22.162 -08 000000091 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2500 mm
17-02-28 20:23:22.164 -08 000000085 INF: X Motor: Xmit MA 7570\n
17-02-28 20:23:22.191 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:23:22.227 -08 000000085 INF: X Motor: Recv MA 7570\r\n>
17-02-28 20:23:22.227 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:22.227 -08 000000085 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:23:22.227 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:23:22.227 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:22.289 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:22.289 -08 000000091 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:23:22.289 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:22.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:22.414 -08 000000091 INF: Y Motor: Unshifted Position: 1071973
17-02-28 20:23:22.464 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:22.473 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:22.587 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:22.723 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:22.725 -08 000000091 INF: Y Motor: Unshifted Position: 1776717
17-02-28 20:23:22.775 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:22.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:22.852 -08 000000085 INF: X Motor: Xmit PR ER\n
17-02-28 20:23:22.902 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:22.911 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:23:22.911 -08 000000085 INF: X Motor: Moved to 77.4814 after 684 ms
17-02-28 20:23:22.911 -08 000000085 INF: ======================================
17-02-28 20:23:23.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:23.037 -08 000000091 INF: Y Motor: Unshifted Position: 2557576
17-02-28 20:23:23.087 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:23.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:23.211 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:23.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:23.350 -08 000000091 INF: Y Motor: Unshifted Position: 3340016
17-02-28 20:23:23.400 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:23.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:23.524 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:23.662 -08 000000091 INF: Y Motor: Unshifted Position: 4120922
17-02-28 20:23:23.668 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:23.712 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:23.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:23.838 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:23.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:23.974 -08 000000091 INF: Y Motor: Unshifted Position: 4900860
17-02-28 20:23:24.024 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:24.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:24.148 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:24.284 -08 000000091 INF: Y Motor: Unshifted Position: 5680166
17-02-28 20:23:24.285 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:24.334 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:24.345 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:24.462 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:24.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:24.596 -08 000000091 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:23:24.596 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:24.596 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:24.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:24.658 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:24.658 -08 000000091 INF: Y Motor: Moved to 64.5335 after 2369 ms
17-02-28 20:23:24.658 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:24.721 -08 000000091 INF: Y Motor: Recv v 4096\r
17-02-28 20:23:24.721 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:24.721 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:24.784 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:24.784 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:24.784 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: Recv v 402653184\r
17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:24.845 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:24.907 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:24.910 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:24.971 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:24.973 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:24.973 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:24.973 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:25.034 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:23:25.034 -08 000000091 INF: ======================================
17-02-28 20:23:25.035 -08 000000023 INF: ===================Move X,Y===================
17-02-28 20:23:25.036 -08 000000023 INF: ======================================
17-02-28 20:23:25.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:25.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:25.039 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:23:25.039 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:23:25.096 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:23:25.096 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:23:25.158 -08 000000073 INF: FPGA: Recv ZFREQCL
17-02-28 20:23:25.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:23:25.158 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:25.159 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:25.220 -08 000000069 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:23:25.220 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:23:25.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:25.221 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:25.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:25.222 -08 000000010 INF: ===================Set YMotor gains for scans===================
17-02-28 20:23:25.222 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:23:25.222 -08 000000010 INF: ======================================
17-02-28 20:23:25.223 -08 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:23:25.223 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:23:25.225 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:23:25.225 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:23:25.225 -08 000000064 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:23:25.280 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:23:25.280 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:23:25.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:25.283 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:23:25.283 -08 000000064 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:23:25.345 -08 000000082 INF: FPGA: Recv TDIYARM2
17-02-28 20:23:25.345 -08 000000064 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:23:25.347 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:23:25.350 -08 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:23:25.350 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:23:25.352 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:23:25.353 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:23:25.353 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:25.531 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:25.595 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:25.723 -08 000000064 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:23:25.724 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:23:25.724 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:25.739 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:23:25.742 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:25.845 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:25.906 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:26.121 -08 000000064 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:23:26.121 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:23:26.121 -08 000000064 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:26.136 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:23:26.138 -08 000000064 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:23:26.139 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:23:26.140 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:26.141 -08 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:23:26.142 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:26.143 -08 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:23:26.143 -08 000000064 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:23:26.143 -08 000000064 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:23:26.144 -08 000000064 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:23:26.156 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:26.156 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:23:26.156 -08 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:23:26.156 -08 000000064 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:23:26.216 -08 000000099 INF: FPGA: Recv ZARM
17-02-28 20:23:26.216 -08 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.5717 ms
17-02-28 20:23:26.216 -08 000000064 INF: Z Motor: ArmAbsStepped took 72.5437 ms
17-02-28 20:23:26.216 -08 000000064 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:26.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:26.218 -08 000000064 INF: ===================TDI Scan Setup===================
17-02-28 20:23:26.219 -08 000000064 INF: ======================================
17-02-28 20:23:26.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:26.221 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:26.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:26.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:26.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:26.224 -08 000000095 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:23:26.225 -08 000000077 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:23:26.225 -08 000000095 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:23:26.225 -08 000000095 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:23:26.225 -08 000000095 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:23:26.225 -08 000000077 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:23:26.225 -08 000000077 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:23:26.225 -08 000000077 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:23:26.225 -08 000000095 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:23:26.226 -08 000000077 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:23:26.468 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:26.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:26.593 -08 000000030 INF: FPGA: Recv EX2MV
17-02-28 20:23:26.593 -08 000000030 INF: FPGA: Recv EX1MV
17-02-28 20:23:26.593 -08 000000077 INF: Excitation Filter 1: Moved -107 steps in 367.3637 ms
17-02-28 20:23:26.593 -08 000000095 INF: Excitation Filter 2: Moved -107 steps in 367.5727 ms
17-02-28 20:23:26.593 -08 000000095 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.7385 ms
17-02-28 20:23:26.593 -08 000000095 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.8358 ms
17-02-28 20:23:26.594 -08 000000077 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.5062 ms
17-02-28 20:23:26.594 -08 000000077 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.9054 ms
17-02-28 20:23:26.594 -08 000000095 INF: ======================================
17-02-28 20:23:26.594 -08 000000077 INF: ======================================
17-02-28 20:23:26.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:26.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:26.597 -08 000000023 INF: ===================Serial===================
17-02-28 20:23:26.597 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:23:26.598 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:26.598 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:26.598 -08 000000023 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:23:26.598 -08 000000023 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:23:26.598 -08 000000066 INF: ===================Camera TDI, Parallel===================
17-02-28 20:23:26.598 -08 000000050 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:23:26.598 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:26.598 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:26.599 -08 000000010 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:23:26.599 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:23:26.599 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:23:26.600 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:26.600 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:26.601 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:26.601 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:26.603 -08 000000010 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:23:26.657 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:23:26.657 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:26.657 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:26.718 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:23:26.718 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:26.733 -08 000000098 INF: RunCopyService queue size at 2/28/2017 8:23:26 PM is 2
17-02-28 20:23:26.750 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:26.750 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:26.751 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:26.751 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:23:26.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:23:26.782 -08 000000050 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:23:27.242 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:27.242 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:27.242 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:27.242 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:27.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:27.244 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:23:27.244 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:23:27.244 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:27.297 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:23:27.297 -08 000000050 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:23:27.297 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:27.392 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:27.392 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:27.393 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:27.393 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:27.422 -08 000000050 INF: Y Motor: Unshifted Position: 5936531
17-02-28 20:23:27.472 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:27.493 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:27.542 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:23:27.542 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:23:27.543 -08 000000078 INF: ===================Camera #2 Frame #1===================
17-02-28 20:23:27.543 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:23:27.543 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:23:27.543 -08 000000037 INF: ===================Camera #0 Frame #1===================
17-02-28 20:23:27.545 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:27.596 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:27.698 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:23:27.698 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:23:27.698 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 1, frameCount = 2.
17-02-28 20:23:27.698 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 2
17-02-28 20:23:27.698 -08 000000078 INF: ===================Camera #2 Frame #2===================
17-02-28 20:23:27.698 -08 000000037 INF: ===================Camera #0 Frame #2===================
17-02-28 20:23:27.732 -08 000000050 INF: Y Motor: Unshifted Position: 5889976
17-02-28 20:23:27.782 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:27.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:27.852 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:23:27.852 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:23:27.852 -08 000000078 INF: ===================Camera #2 Frame #3===================
17-02-28 20:23:27.853 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:23:27.853 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:23:27.853 -08 000000037 INF: ===================Camera #0 Frame #3===================
17-02-28 20:23:27.857 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:27.908 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:28.008 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:28.008 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:28.008 -08 000000037 INF: ===================Camera #0 Frame #5===================
17-02-28 20:23:28.009 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:28.009 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:28.009 -08 000000078 INF: ===================Camera #2 Frame #5===================
17-02-28 20:23:28.045 -08 000000050 INF: Y Motor: Unshifted Position: 5842877
17-02-28 20:23:28.095 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:28.105 -08 000000059 INF: FPGA: Recv ZWAIT 
17-02-28 20:23:28.106 -08 000000023 INF: ===================Serial===================
17-02-28 20:23:28.107 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:28.107 -08 000000023 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:23:28.108 -08 000000023 INF: ===================Serial===================
17-02-28 20:23:28.109 -08 000000023 INF: ======================================
17-02-28 20:23:28.164 -08 000000037 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:23:28.164 -08 000000037 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:23:28.164 -08 000000037 INF: ===================Camera #0 Frame #6===================
17-02-28 20:23:28.165 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:23:28.165 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:23:28.165 -08 000000078 INF: ===================Camera #2 Frame #6===================
17-02-28 20:23:28.167 -08 000000099 INF: FPGA: Recv TDIYWAIT
17-02-28 20:23:28.167 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:28.167 -08 000000037 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:23:28.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:28.168 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:28.168 -08 000000078 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:23:28.169 -08 000000010 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:23:28.169 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:28.170 -08 000000073 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:23:28.170 -08 000000108 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:23:28.170 -08 000000073 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:23:28.170 -08 000000073 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:23:28.170 -08 000000073 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:23:28.170 -08 000000073 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:23:28.170 -08 000000108 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:23:28.170 -08 000000108 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:23:28.170 -08 000000108 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:23:28.173 -08 000000108 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:23:28.191 -08 000000037 INF: Camera #0 ReleaseBuffer
17-02-28 20:23:28.191 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:23:28.192 -08 000000037 INF: ======================================
17-02-28 20:23:28.216 -08 000000078 INF: Camera #2 ReleaseBuffer
17-02-28 20:23:28.216 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:23:28.217 -08 000000078 INF: ======================================
17-02-28 20:23:28.219 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:23:28.220 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:28.220 -08 000000066 INF: ======================================
17-02-28 20:23:28.358 -08 000000050 INF: Y Motor: Unshifted Position: 5797054
17-02-28 20:23:28.408 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:28.418 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:28.480 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:28.544 -08 000000104 INF: FPGA: Recv EX1MV
17-02-28 20:23:28.544 -08 000000104 INF: FPGA: Recv EX2MV
17-02-28 20:23:28.544 -08 000000108 INF: Excitation Filter 2: Moved 107 steps in 373.444 ms
17-02-28 20:23:28.544 -08 000000073 INF: Excitation Filter 1: Moved 107 steps in 373.7052 ms
17-02-28 20:23:28.544 -08 000000073 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.8656 ms
17-02-28 20:23:28.544 -08 000000073 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.9371 ms
17-02-28 20:23:28.544 -08 000000108 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.6067 ms
17-02-28 20:23:28.544 -08 000000108 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 374.015 ms
17-02-28 20:23:28.545 -08 000000073 INF: ======================================
17-02-28 20:23:28.545 -08 000000108 INF: ======================================
17-02-28 20:23:28.546 -08 000000050 INF: Y Motor: Unshifted Position: 5797043
17-02-28 20:23:28.546 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:28.546 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:28.546 -08 000000010 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:28.547 -08 000000010 INF: ======================================
17-02-28 20:23:28.610 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:23:28.610 -08 000000050 INF: Y Motor: Moved to 62.9704 after 1313 ms
17-02-28 20:23:28.610 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:28.669 -08 000000050 INF: Y Motor: Recv v 4097\r
17-02-28 20:23:28.669 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:28.669 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:28.730 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:28.731 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:23:28.731 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:28.731 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:28.794 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: Recv v 134217728\r
17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:28.797 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:28.857 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:28.920 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:23:28.920 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:28.920 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:28.982 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:23:28.982 -08 000000050 INF: ======================================
17-02-28 20:23:28.983 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:28.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:23:28.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:28.986 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:23:29.042 -08 000000101 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:23:29.042 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:29.044 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:29.104 -08 000000077 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:23:29.104 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:23:29.105 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:29.166 -08 000000082 INF: FPGA: Recv ZADCR 2421
17-02-28 20:23:29.166 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:23:29.166 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:23:29.228 -08 000000037 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:23:29.228 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:23:29.228 -08 000000042 INF: TDIScan finished after 7231.6774 ms
17-02-28 20:23:29.228 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:23:29.228 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:23:29.229 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:23:29.290 -08 000000010 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:23:29.291 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.292 -08 000000058 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:23:29.292 -08 000000072 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:23:29.293 -08 000000077 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:23:29.293 -08 000000058 INF: ======================================
17-02-28 20:23:29.293 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:29.293 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:29.294 -08 000000072 INF: ======================================
17-02-28 20:23:29.355 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:29.356 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:23:29.356 -08 000000077 INF: ======================================
17-02-28 20:23:29.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:23:29.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.404 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:23:29.417 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:29.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:23:29.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:23:29.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:29.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:29.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:29.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:23:29.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:29.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:23:29.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:23:29.667 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:29.729 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:29.979 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:30.041 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:30.164 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:23:30.187 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0880516616390783Best Z position at top surface = -0.159423559532561Best Z position at top surface + compensator offset = -0.136723559532561 C:3,L:4,T
17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159423559532561
17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97418
17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0880516616390783
17-02-28 20:23:30.188 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63056
17-02-28 20:23:30.188 -08 000000042 INF: Z-height at LaneTopSurface is -0.159423559532561.
17-02-28 20:23:30.188 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:30.291 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:30.321 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:23:30.321 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:23:30.351 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:30.351 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Focus Point 1===================
17-02-28 20:23:30.352 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:30.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.353 -08 000000042 INF: Lane 4, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:23:30.353 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.354 -08 000000059 INF: ===================Move Tilt Motor 1===================
17-02-28 20:23:30.354 -08 000000101 INF: ===================Move Tilt Motor 3===================
17-02-28 20:23:30.355 -08 000000078 INF: ===================Move Tilt Motor 2===================
17-02-28 20:23:30.355 -08 000000078 INF: ======================================
17-02-28 20:23:30.355 -08 000000101 INF: ======================================
17-02-28 20:23:30.356 -08 000000059 INF: ======================================
17-02-28 20:23:30.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.357 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.358 -08 000000042 INF: ETF Best Z: -0.1367236 mm (35841 DAC)
17-02-28 20:23:30.358 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.359 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:23:30.359 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:23:30.602 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:30.666 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:30.790 -08 000000109 INF: FPGA: Recv MIOCOMPF
17-02-28 20:23:30.790 -08 000000042 INF: Compensator: Moved IntoPath in 431 ms
17-02-28 20:23:30.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:30.797 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92664, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:23:30.798 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03464, Y=39.76308} from estimated center X= 77.44199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:23:30.803 -08 000000042 INF: Swath 0: Converted transform from (-34.14099, 9.916637) pixels to (-0.01173, 0.00345) mm.
17-02-28 20:23:30.809 -08 000000042 INF: Swath 1: Converted transform from (-57.09752, 9.859371) pixels to (-0.019665, 0.00345) mm.
17-02-28 20:23:30.809 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:23:30.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:23:30.810 -08 000000042 INF: Transformed XStagePosition from 76.92664 mm to 76.9149057418108 mm.
17-02-28 20:23:30.821 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5565393554289 mm.
17-02-28 20:23:30.821 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3565393554289 mm.
17-02-28 20:23:30.821 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4472893554289 mm.
17-02-28 20:23:30.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:30.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:23:30.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:30.824 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:23:30.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:30.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:30.831 -08 000000037 INF: ===================MoveEmissionFilters===================
17-02-28 20:23:30.831 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:30.831 -08 000000046 INF: ===================Move X,Y===================
17-02-28 20:23:30.832 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:30.832 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:30.832 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:23:30.832 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:30.832 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:30.832 -08 000000046 INF: ===================Move X,Y, Parallel===================
17-02-28 20:23:30.832 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:30.833 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:30.833 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:30.833 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:30.833 -08 000000023 INF: ===================Move X Motor without settling===================
17-02-28 20:23:30.833 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:30.833 -08 000000023 INF: X Motor: Xmit PR VM\n
17-02-28 20:23:30.833 -08 000000104 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:23:30.833 -08 000000066 INF: Y Motor: Moving to 64.5565 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:23:30.833 -08 000000033 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:23:30.834 -08 000000050 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:23:30.834 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:23:30.834 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:30.834 -08 000000035 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:23:30.834 -08 000000091 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:23:30.834 -08 000000085 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:23:30.834 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:30.834 -08 000000073 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:23:30.834 -08 000000104 INF: ======================================
17-02-28 20:23:30.834 -08 000000085 INF: ======================================
17-02-28 20:23:30.834 -08 000000073 INF: ======================================
17-02-28 20:23:30.835 -08 000000033 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:23:30.835 -08 000000059 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:23:30.835 -08 000000059 INF: Z Motor: Moving to -0.1567 mm, started at -0.0100 mm
17-02-28 20:23:30.835 -08 000000082 INF: ======================================
17-02-28 20:23:30.835 -08 000000059 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:23:30.835 -08 000000033 INF: ======================================
17-02-28 20:23:30.836 -08 000000087 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:30.837 -08 000000050 INF: ======================================
17-02-28 20:23:30.837 -08 000000091 INF: ======================================
17-02-28 20:23:30.837 -08 000000035 INF: ======================================
17-02-28 20:23:30.838 -08 000000087 INF: ======================================
17-02-28 20:23:30.838 -08 000000108 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:30.838 -08 000000064 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:30.838 -08 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:30.839 -08 000000108 INF: ======================================
17-02-28 20:23:30.839 -08 000000064 INF: ======================================
17-02-28 20:23:30.839 -08 000000078 INF: ======================================
17-02-28 20:23:30.840 -08 000000037 INF: ======================================
17-02-28 20:23:30.853 -08 000000030 INF: FPGA: Recv ZTRG 
17-02-28 20:23:30.853 -08 000000059 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:23:30.915 -08 000000037 INF: FPGA: Recv ZYT 
17-02-28 20:23:30.915 -08 000000059 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:23:30.915 -08 000000059 INF: FPGA: Xmit ZMV 41084\n
17-02-28 20:23:30.916 -08 000000023 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:23:30.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:30.916 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:30.916 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:30.916 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:30.916 -08 000000023 INF: X Motor: Xmit PR VI\n
17-02-28 20:23:30.976 -08 000000062 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:23:30.976 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:23:30.977 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Moving to 76.9149 mm @15.000 mm/sec, started at 77.4814 mm
17-02-28 20:23:30.978 -08 000000023 INF: X Motor: Xmit MA 7338\n
17-02-28 20:23:30.979 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:30.979 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:31.040 -08 000000023 INF: X Motor: Recv MA 7338\r\n>
17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:31.040 -08 000000023 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Set target position to 5955654 encoder counts
17-02-28 20:23:31.040 -08 000000066 INF: Y Motor: Xmit s r0xca 5955654\r
17-02-28 20:23:31.100 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:23:31.100 -08 000000059 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.1136 ms
17-02-28 20:23:31.100 -08 000000059 INF: FPGA: Xmit ZDACR\n
17-02-28 20:23:31.102 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:31.102 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:23:31.102 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:31.162 -08 000000104 INF: FPGA: Recv ZDACR 41084
17-02-28 20:23:31.162 -08 000000059 INF: Z Motor: MoveAndTrigger took 327.1223 ms w/comms
17-02-28 20:23:31.162 -08 000000059 INF: Z Motor: After move to -0.1567, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:23:31.162 -08 000000059 INF: Z Motor: MoveAbsStepped took 327.35 ms
17-02-28 20:23:31.163 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:31.164 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:31.164 -08 000000066 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:23:31.164 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:31.164 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:23:31.165 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:23:31.165 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:23:31.165 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:31.166 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:31.166 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:23:31.166 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:31.167 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:31.167 -08 000000109 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:23:31.226 -08 000000077 INF: FPGA: Recv ZSEL 
17-02-28 20:23:31.227 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:31.227 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:31.227 -08 000000109 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:23:31.287 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:23:31.287 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:31.288 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:31.288 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:23:31.289 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:31.290 -08 000000066 INF: Y Motor: Unshifted Position: 5881016
17-02-28 20:23:31.290 -08 000000109 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:23:31.291 -08 000000109 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:23:31.291 -08 000000109 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:23:31.340 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:31.349 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:31.349 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:31.351 -08 000000109 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:23:31.351 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:31.353 -08 000000109 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:23:31.353 -08 000000109 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:23:31.353 -08 000000109 INF: Z Motor: Arming to move to -0.1167 mm
17-02-28 20:23:31.353 -08 000000109 INF: FPGA: Xmit ZYT 6435654 4\n
17-02-28 20:23:31.413 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:23:31.413 -08 000000109 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381016 enc / 63.810 mm / ) = 6435654 enc / 64.357 mm
17-02-28 20:23:31.413 -08 000000109 INF: FPGA: Xmit ZARM 30598\n
17-02-28 20:23:31.465 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:31.475 -08 000000045 INF: FPGA: Recv ZARM
17-02-28 20:23:31.475 -08 000000109 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0233 ms
17-02-28 20:23:31.475 -08 000000109 INF: Z Motor: ArmAbsStepped took 121.9907 ms
17-02-28 20:23:31.475 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:31.476 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:23:31.477 -08 000000023 INF: X Motor: Xmit PR ER\n
17-02-28 20:23:31.478 -08 000000109 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:23:31.478 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:23:31.480 -08 000000109 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:23:31.480 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:23:31.481 -08 000000109 INF: ======================================
17-02-28 20:23:31.538 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:31.539 -08 000000023 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:23:31.539 -08 000000023 INF: X Motor: Moved to 76.9150 after 499 ms
17-02-28 20:23:31.539 -08 000000023 INF: ======================================
17-02-28 20:23:31.600 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:31.601 -08 000000066 INF: Y Motor: Unshifted Position: 5955655
17-02-28 20:23:31.601 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:31.601 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:31.663 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:23:31.663 -08 000000066 INF: Y Motor: Moved to 64.5566 after 499 ms
17-02-28 20:23:31.663 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:31.728 -08 000000066 INF: Y Motor: Recv v 4096\r
17-02-28 20:23:31.728 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:31.728 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:31.790 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:23:31.790 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:31.790 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:31.850 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: Recv v 402653184\r
17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:31.853 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:31.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:31.915 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:31.977 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:31.977 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:31.977 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:32.040 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:32.040 -08 000000066 INF: ======================================
17-02-28 20:23:32.041 -08 000000046 INF: ===================Move X,Y===================
17-02-28 20:23:32.042 -08 000000046 INF: ======================================
17-02-28 20:23:32.150 -08 000000101 INF: Camera #0 AttachBuffer (imageDataPtr = 56918282288 imgPtr = 56918282288 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:23:32.150 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:23:32.151 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:32.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:32.166 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:32.168 -08 000000101 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:32.224 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:32.474 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:32.536 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:32.786 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:32.851 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:33.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:33.161 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:33.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:33.473 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:33.546 -08 000000101 INF: Camera #2 AttachBuffer (imageDataPtr = 58730221616 imgPtr = 59636191280 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:23:33.546 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:23:33.546 -08 000000101 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:33.561 -08 000000101 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:33.563 -08 000000101 INF: ===================Camera Arm TDI===================
17-02-28 20:23:33.564 -08 000000101 INF: ======================================
17-02-28 20:23:33.565 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:33.566 -08 000000059 INF: ======================================
17-02-28 20:23:33.567 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:33.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:33.568 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:23:33.568 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:23:33.600 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:23:33.600 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:23:33.660 -08 000000046 INF: FPGA: Recv ZFREQCL
17-02-28 20:23:33.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:23:33.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:33.660 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:33.722 -08 000000037 INF: FPGA: Recv TDIYERD 6455656
17-02-28 20:23:33.722 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455656 counts (64.557 mm)
17-02-28 20:23:33.722 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:33.723 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:33.723 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:33.723 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:23:33.723 -08 000000104 INF: ===================Set YMotor gains for scans===================
17-02-28 20:23:33.724 -08 000000104 INF: ======================================
17-02-28 20:23:33.724 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:33.725 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:23:33.725 -08 000000039 INF: FPGA: Xmit TDIYPOS 6344729\n
17-02-28 20:23:33.784 -08 000000077 INF: FPGA: Recv TDIYPOS
17-02-28 20:23:33.784 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:33.785 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:33.786 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:23:33.786 -08 000000039 INF: FPGA: Xmit TDIYARM3 139264 6435654 1 1\n
17-02-28 20:23:33.846 -08 000000066 INF: FPGA: Recv TDIYARM3
17-02-28 20:23:33.846 -08 000000039 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:33.847 -08 000000039 INF: ===================TDI FPGA Arm===================
17-02-28 20:23:33.848 -08 000000039 INF: ======================================
17-02-28 20:23:33.849 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:33.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:33.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:33.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:33.851 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:33.852 -08 000000046 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:23:33.852 -08 000000035 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:23:33.852 -08 000000046 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:23:33.852 -08 000000046 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:23:33.852 -08 000000046 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:23:33.852 -08 000000035 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:23:33.852 -08 000000046 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:23:33.852 -08 000000035 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:23:33.852 -08 000000035 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:23:33.853 -08 000000035 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:23:34.035 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:34.097 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:34.222 -08 000000105 INF: FPGA: Recv EX2MV
17-02-28 20:23:34.222 -08 000000105 INF: FPGA: Recv EX1MV
17-02-28 20:23:34.222 -08 000000035 INF: Excitation Filter 1: Moved -107 steps in 369.897 ms
17-02-28 20:23:34.222 -08 000000035 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 370.0313 ms
17-02-28 20:23:34.222 -08 000000046 INF: Excitation Filter 2: Moved -107 steps in 370.0982 ms
17-02-28 20:23:34.222 -08 000000046 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.2301 ms
17-02-28 20:23:34.222 -08 000000046 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.3023 ms
17-02-28 20:23:34.222 -08 000000035 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 370.1047 ms
17-02-28 20:23:34.222 -08 000000046 INF: ======================================
17-02-28 20:23:34.223 -08 000000035 INF: ======================================
17-02-28 20:23:34.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:34.225 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:34.226 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:23:34.226 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:34.226 -08 000000095 INF: ===================FPGA Z Wait===================
17-02-28 20:23:34.226 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:34.226 -08 000000095 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:23:34.226 -08 000000098 INF: Y Motor: Moving to 14.9082 mm @6.500 mm/sec, started at 64.5566 mm
17-02-28 20:23:34.226 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:34.226 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:34.226 -08 000000101 INF: ===================Camera TDI, Parallel===================
17-02-28 20:23:34.226 -08 000000083 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:23:34.227 -08 000000083 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:23:34.227 -08 000000023 INF: ===================Camera TDI===================
17-02-28 20:23:34.227 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:23:34.228 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:34.228 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:34.229 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:34.229 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:34.285 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:23:34.285 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:34.285 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:34.347 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:23:34.347 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:34.347 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:34.379 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:34.379 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:34.379 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:34.379 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:34.408 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Set target position to 990820 encoder counts
17-02-28 20:23:34.409 -08 000000098 INF: Y Motor: Xmit s r0xca 990820\r
17-02-28 20:23:34.473 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:23:34.473 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:23:34.473 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:34.529 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:34.529 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:34.529 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:34.529 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:34.535 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:23:34.535 -08 000000098 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:23:34.535 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:34.596 -08 000000064 INF: FPGA: Recv ZWAIT 
17-02-28 20:23:34.596 -08 000000095 INF: ======================================
17-02-28 20:23:34.658 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:34.662 -08 000000098 INF: Y Motor: Unshifted Position: 5893153
17-02-28 20:23:34.679 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:34.679 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:34.679 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:34.679 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:34.679 -08 000000078 INF: ===================Camera #2 Frame #5===================
17-02-28 20:23:34.679 -08 000000023 INF: ===================Camera #0 Frame #5===================
17-02-28 20:23:34.712 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:34.724 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:34.835 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:34.844 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:23:34.844 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:23:34.844 -08 000000023 INF: ===================Camera #0 Frame #11===================
17-02-28 20:23:34.845 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:23:34.845 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:23:34.845 -08 000000078 INF: ===================Camera #2 Frame #11===================
17-02-28 20:23:34.970 -08 000000098 INF: Y Motor: Unshifted Position: 5690356
17-02-28 20:23:34.974 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:35.012 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:23:35.012 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:23:35.012 -08 000000023 INF: ===================Camera #0 Frame #17===================
17-02-28 20:23:35.014 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:23:35.014 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:23:35.014 -08 000000078 INF: ===================Camera #2 Frame #17===================
17-02-28 20:23:35.020 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:35.034 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:35.146 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:35.180 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:23:35.180 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:23:35.180 -08 000000023 INF: ===================Camera #0 Frame #23===================
17-02-28 20:23:35.183 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:23:35.183 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:23:35.183 -08 000000078 INF: ===================Camera #2 Frame #23===================
17-02-28 20:23:35.284 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:35.284 -08 000000098 INF: Y Motor: Unshifted Position: 5486042
17-02-28 20:23:35.334 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:35.346 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:35.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:35.346 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:35.346 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:23:35.347 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:23:35.348 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:23:35.348 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:23:35.348 -08 000000023 INF: ===================Camera #0 Frame #29===================
17-02-28 20:23:35.352 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:23:35.352 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:23:35.352 -08 000000078 INF: ===================Camera #2 Frame #29===================
17-02-28 20:23:35.458 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:35.516 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:23:35.516 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:23:35.516 -08 000000023 INF: ===================Camera #0 Frame #35===================
17-02-28 20:23:35.521 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:23:35.521 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:23:35.521 -08 000000078 INF: ===================Camera #2 Frame #36===================
17-02-28 20:23:35.594 -08 000000098 INF: Y Motor: Unshifted Position: 5285836
17-02-28 20:23:35.644 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:35.684 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:23:35.684 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:23:35.684 -08 000000023 INF: ===================Camera #0 Frame #42===================
17-02-28 20:23:35.694 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:23:35.694 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:23:35.694 -08 000000078 INF: ===================Camera #2 Frame #42===================
17-02-28 20:23:35.771 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:35.856 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:23:35.856 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:23:35.856 -08 000000023 INF: ===================Camera #0 Frame #48===================
17-02-28 20:23:35.864 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:23:35.864 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:23:35.864 -08 000000078 INF: ===================Camera #2 Frame #48===================
17-02-28 20:23:35.907 -08 000000098 INF: Y Motor: Unshifted Position: 5082166
17-02-28 20:23:35.957 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:36.025 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:23:36.025 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:23:36.025 -08 000000023 INF: ===================Camera #0 Frame #54===================
17-02-28 20:23:36.034 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:23:36.034 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:23:36.034 -08 000000078 INF: ===================Camera #2 Frame #54===================
17-02-28 20:23:36.081 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:36.194 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:23:36.194 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:23:36.194 -08 000000023 INF: ===================Camera #0 Frame #60===================
17-02-28 20:23:36.204 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:23:36.204 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:23:36.204 -08 000000078 INF: ===================Camera #2 Frame #61===================
17-02-28 20:23:36.220 -08 000000098 INF: Y Motor: Unshifted Position: 4878716
17-02-28 20:23:36.270 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:36.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:36.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:23:36.364 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:23:36.364 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:23:36.364 -08 000000023 INF: ===================Camera #0 Frame #67===================
17-02-28 20:23:36.378 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:23:36.379 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:23:36.379 -08 000000078 INF: ===================Camera #2 Frame #67===================
17-02-28 20:23:36.395 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:36.531 -08 000000098 INF: Y Motor: Unshifted Position: 4676999
17-02-28 20:23:36.536 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:23:36.536 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:23:36.536 -08 000000023 INF: ===================Camera #0 Frame #73===================
17-02-28 20:23:36.548 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:23:36.548 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:23:36.548 -08 000000078 INF: ===================Camera #2 Frame #73===================
17-02-28 20:23:36.581 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:36.705 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:23:36.705 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:23:36.705 -08 000000023 INF: ===================Camera #0 Frame #79===================
17-02-28 20:23:36.708 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:36.717 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:23:36.717 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:23:36.717 -08 000000078 INF: ===================Camera #2 Frame #80===================
17-02-28 20:23:36.844 -08 000000098 INF: Y Motor: Unshifted Position: 4473541
17-02-28 20:23:36.874 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:23:36.874 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:23:36.874 -08 000000023 INF: ===================Camera #0 Frame #85===================
17-02-28 20:23:36.891 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:23:36.891 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:23:36.891 -08 000000078 INF: ===================Camera #2 Frame #86===================
17-02-28 20:23:36.894 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.020 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.043 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:23:37.043 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:23:37.043 -08 000000023 INF: ===================Camera #0 Frame #92===================
17-02-28 20:23:37.061 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:23:37.061 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:23:37.061 -08 000000078 INF: ===================Camera #2 Frame #92===================
17-02-28 20:23:37.158 -08 000000098 INF: Y Motor: Unshifted Position: 4269230
17-02-28 20:23:37.208 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.216 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:23:37.216 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:23:37.216 -08 000000023 INF: ===================Camera #0 Frame #98===================
17-02-28 20:23:37.231 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:23:37.231 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:23:37.231 -08 000000078 INF: ===================Camera #2 Frame #98===================
17-02-28 20:23:37.333 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:37.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:23:37.386 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:23:37.386 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:23:37.386 -08 000000023 INF: ===================Camera #0 Frame #104===================
17-02-28 20:23:37.401 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:23:37.401 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:23:37.401 -08 000000078 INF: ===================Camera #2 Frame #105===================
17-02-28 20:23:37.468 -08 000000098 INF: Y Motor: Unshifted Position: 4067500
17-02-28 20:23:37.518 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.555 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:23:37.555 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:23:37.555 -08 000000023 INF: ===================Camera #0 Frame #110===================
17-02-28 20:23:37.575 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:23:37.575 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:23:37.575 -08 000000078 INF: ===================Camera #2 Frame #111===================
17-02-28 20:23:37.642 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.725 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:23:37.725 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:23:37.725 -08 000000023 INF: ===================Camera #0 Frame #117===================
17-02-28 20:23:37.746 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:23:37.746 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:23:37.746 -08 000000078 INF: ===================Camera #2 Frame #117===================
17-02-28 20:23:37.779 -08 000000098 INF: Y Motor: Unshifted Position: 3863405
17-02-28 20:23:37.829 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:37.898 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:23:37.898 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:23:37.898 -08 000000023 INF: ===================Camera #0 Frame #123===================
17-02-28 20:23:37.917 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:23:37.917 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:23:37.917 -08 000000078 INF: ===================Camera #2 Frame #124===================
17-02-28 20:23:37.956 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.067 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:23:38.067 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:23:38.067 -08 000000023 INF: ===================Camera #0 Frame #129===================
17-02-28 20:23:38.091 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:23:38.091 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:23:38.091 -08 000000078 INF: ===================Camera #2 Frame #130===================
17-02-28 20:23:38.092 -08 000000098 INF: Y Motor: Unshifted Position: 3661900
17-02-28 20:23:38.142 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.237 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:23:38.237 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:23:38.237 -08 000000023 INF: ===================Camera #0 Frame #136===================
17-02-28 20:23:38.261 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:23:38.261 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:23:38.261 -08 000000078 INF: ===================Camera #2 Frame #136===================
17-02-28 20:23:38.266 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:38.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:23:38.406 -08 000000098 INF: Y Motor: Unshifted Position: 3457590
17-02-28 20:23:38.410 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:23:38.410 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:23:38.410 -08 000000023 INF: ===================Camera #0 Frame #142===================
17-02-28 20:23:38.432 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:23:38.432 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:23:38.432 -08 000000078 INF: ===================Camera #2 Frame #143===================
17-02-28 20:23:38.456 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.578 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.580 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:23:38.580 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:23:38.580 -08 000000023 INF: ===================Camera #0 Frame #148===================
17-02-28 20:23:38.606 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:23:38.606 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:23:38.606 -08 000000078 INF: ===================Camera #2 Frame #149===================
17-02-28 20:23:38.715 -08 000000098 INF: Y Motor: Unshifted Position: 3254573
17-02-28 20:23:38.750 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:23:38.750 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:23:38.750 -08 000000023 INF: ===================Camera #0 Frame #154===================
17-02-28 20:23:38.765 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.777 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:23:38.777 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:23:38.777 -08 000000078 INF: ===================Camera #2 Frame #155===================
17-02-28 20:23:38.892 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:38.920 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:23:38.920 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:23:38.920 -08 000000023 INF: ===================Camera #0 Frame #161===================
17-02-28 20:23:38.948 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:23:38.948 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:23:38.948 -08 000000078 INF: ===================Camera #2 Frame #162===================
17-02-28 20:23:39.028 -08 000000098 INF: Y Motor: Unshifted Position: 3053076
17-02-28 20:23:39.078 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:39.093 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:23:39.093 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:23:39.093 -08 000000023 INF: ===================Camera #0 Frame #167===================
17-02-28 20:23:39.122 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:23:39.122 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:23:39.122 -08 000000078 INF: ===================Camera #2 Frame #168===================
17-02-28 20:23:39.202 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:39.263 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:23:39.263 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:23:39.263 -08 000000023 INF: ===================Camera #0 Frame #173===================
17-02-28 20:23:39.293 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:23:39.293 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:23:39.293 -08 000000078 INF: ===================Camera #2 Frame #174===================
17-02-28 20:23:39.339 -08 000000098 INF: Y Motor: Unshifted Position: 2848764
17-02-28 20:23:39.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:39.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:23:39.389 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:39.433 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:23:39.433 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:23:39.433 -08 000000023 INF: ===================Camera #0 Frame #180===================
17-02-28 20:23:39.465 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:23:39.465 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:23:39.465 -08 000000078 INF: ===================Camera #2 Frame #181===================
17-02-28 20:23:39.514 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:39.606 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:23:39.606 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:23:39.606 -08 000000023 INF: ===================Camera #0 Frame #186===================
17-02-28 20:23:39.639 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:23:39.639 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:23:39.639 -08 000000078 INF: ===================Camera #2 Frame #187===================
17-02-28 20:23:39.651 -08 000000098 INF: Y Motor: Unshifted Position: 2645964
17-02-28 20:23:39.701 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:39.776 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:23:39.776 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:23:39.776 -08 000000023 INF: ===================Camera #0 Frame #192===================
17-02-28 20:23:39.809 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:23:39.809 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:23:39.809 -08 000000078 INF: ===================Camera #2 Frame #193===================
17-02-28 20:23:39.828 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:39.946 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:23:39.946 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:23:39.946 -08 000000023 INF: ===================Camera #0 Frame #198===================
17-02-28 20:23:39.966 -08 000000098 INF: Y Motor: Unshifted Position: 2444260
17-02-28 20:23:39.980 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:23:39.980 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:23:39.980 -08 000000078 INF: ===================Camera #2 Frame #200===================
17-02-28 20:23:40.016 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.115 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:23:40.115 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:23:40.115 -08 000000023 INF: ===================Camera #0 Frame #205===================
17-02-28 20:23:40.138 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.154 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:23:40.154 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:23:40.154 -08 000000078 INF: ===================Camera #2 Frame #206===================
17-02-28 20:23:40.275 -08 000000098 INF: Y Motor: Unshifted Position: 2240156
17-02-28 20:23:40.288 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:23:40.288 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:23:40.288 -08 000000023 INF: ===================Camera #0 Frame #211===================
17-02-28 20:23:40.325 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.325 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:23:40.325 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:23:40.325 -08 000000078 INF: ===================Camera #2 Frame #212===================
17-02-28 20:23:40.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:40.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:40.348 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:23:40.348 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:40.447 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:23:40.452 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.457 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:23:40.457 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:23:40.457 -08 000000023 INF: ===================Camera #0 Frame #217===================
17-02-28 20:23:40.496 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:23:40.496 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:23:40.496 -08 000000078 INF: ===================Camera #2 Frame #219===================
17-02-28 20:23:40.527 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:23:40.527 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:23:40.587 -08 000000098 INF: Y Motor: Unshifted Position: 2037137
17-02-28 20:23:40.626 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:23:40.626 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:23:40.626 -08 000000023 INF: ===================Camera #0 Frame #223===================
17-02-28 20:23:40.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:23:40.637 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.670 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:23:40.670 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:23:40.670 -08 000000078 INF: ===================Camera #2 Frame #225===================
17-02-28 20:23:40.713 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`9600 (0x03)\r\n(0xFF)
17-02-28 20:23:40.713 -08 000000018 INF: Current Position of Pump is: 9600
17-02-28 20:23:40.713 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:23:40.764 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.796 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:23:40.796 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:23:40.796 -08 000000023 INF: ===================Camera #0 Frame #230===================
17-02-28 20:23:40.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD9600R\r
17-02-28 20:23:40.840 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:23:40.840 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:23:40.840 -08 000000078 INF: ===================Camera #2 Frame #231===================
17-02-28 20:23:40.899 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:40.900 -08 000000098 INF: Y Motor: Unshifted Position: 1835635
17-02-28 20:23:40.950 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:40.969 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:23:40.969 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:23:40.969 -08 000000023 INF: ===================Camera #0 Frame #236===================
17-02-28 20:23:40.999 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:41.011 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:23:41.011 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:23:41.011 -08 000000078 INF: ===================Camera #2 Frame #238===================
17-02-28 20:23:41.074 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:41.085 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:41.139 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:23:41.139 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:23:41.139 -08 000000023 INF: ===================Camera #0 Frame #242===================
17-02-28 20:23:41.185 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:23:41.185 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:23:41.185 -08 000000078 INF: ===================Camera #2 Frame #244===================
17-02-28 20:23:41.211 -08 000000098 INF: Y Motor: Unshifted Position: 1631528
17-02-28 20:23:41.261 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:41.309 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:23:41.309 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:23:41.309 -08 000000023 INF: ===================Camera #0 Frame #249===================
17-02-28 20:23:41.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:41.356 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:23:41.356 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:23:41.356 -08 000000078 INF: ===================Camera #2 Frame #250===================
17-02-28 20:23:41.388 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:41.399 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:41.482 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:23:41.482 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:23:41.482 -08 000000023 INF: ===================Camera #0 Frame #255===================
17-02-28 20:23:41.523 -08 000000098 INF: Y Motor: Unshifted Position: 1428514
17-02-28 20:23:41.527 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:23:41.527 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:23:41.527 -08 000000078 INF: ===================Camera #2 Frame #257===================
17-02-28 20:23:41.573 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:41.649 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:41.652 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:23:41.652 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:23:41.652 -08 000000023 INF: ===================Camera #0 Frame #261===================
17-02-28 20:23:41.700 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:41.701 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:23:41.701 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:23:41.701 -08 000000078 INF: ===================Camera #2 Frame #263===================
17-02-28 20:23:41.711 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:41.822 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:23:41.822 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:23:41.822 -08 000000023 INF: ===================Camera #0 Frame #268===================
17-02-28 20:23:41.838 -08 000000098 INF: Y Motor: Unshifted Position: 1226780
17-02-28 20:23:41.872 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:23:41.872 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:23:41.872 -08 000000078 INF: ===================Camera #2 Frame #269===================
17-02-28 20:23:41.888 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:41.958 -08 000000051 INF: FPGA: Recv TDIYWAIT
17-02-28 20:23:41.958 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:41.960 -08 000000083 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:23:41.961 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:41.961 -08 000000091 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:23:41.961 -08 000000064 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:23:41.961 -08 000000091 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:23:41.961 -08 000000091 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:23:41.961 -08 000000091 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:23:41.961 -08 000000064 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:23:41.961 -08 000000064 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:23:41.961 -08 000000064 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:23:41.961 -08 000000091 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:23:41.962 -08 000000064 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:23:41.995 -08 000000023 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:41.995 -08 000000023 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:41.995 -08 000000023 INF: ===================Camera #0 Frame #272===================
17-02-28 20:23:42.008 -08 000000023 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:42.009 -08 000000023 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:42.010 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:42.021 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:42.147 -08 000000098 INF: Y Motor: Unshifted Position: 1022693
17-02-28 20:23:42.173 -08 000000023 INF: Camera #0 ReleaseBuffer
17-02-28 20:23:42.173 -08 000000078 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:42.173 -08 000000078 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:42.173 -08 000000078 INF: ===================Camera #2 Frame #272===================
17-02-28 20:23:42.173 -08 000000023 INF: ===================Camera TDI===================
17-02-28 20:23:42.182 -08 000000078 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:42.183 -08 000000078 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:42.197 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:42.214 -08 000000023 INF: ======================================
17-02-28 20:23:42.271 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:42.335 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:42.335 -08 000000105 INF: FPGA: Recv EX1MV
17-02-28 20:23:42.335 -08 000000105 INF: FPGA: Recv EX2MV
17-02-28 20:23:42.335 -08 000000064 INF: Excitation Filter 2: Moved 107 steps in 373.6706 ms
17-02-28 20:23:42.335 -08 000000064 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.7717 ms
17-02-28 20:23:42.335 -08 000000091 INF: Excitation Filter 1: Moved 107 steps in 373.8409 ms
17-02-28 20:23:42.335 -08 000000091 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.9694 ms
17-02-28 20:23:42.335 -08 000000091 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 374.0348 ms
17-02-28 20:23:42.335 -08 000000064 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.8466 ms
17-02-28 20:23:42.335 -08 000000091 INF: ======================================
17-02-28 20:23:42.335 -08 000000064 INF: ======================================
17-02-28 20:23:42.336 -08 000000098 INF: Y Motor: Unshifted Position: 990820
17-02-28 20:23:42.336 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:42.336 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:42.336 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:42.337 -08 000000083 INF: ======================================
17-02-28 20:23:42.375 -08 000000078 INF: Camera #2 ReleaseBuffer
17-02-28 20:23:42.375 -08 000000078 INF: ===================Camera TDI===================
17-02-28 20:23:42.398 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:23:42.398 -08 000000098 INF: Y Motor: Moved to 14.9082 after 7862 ms
17-02-28 20:23:42.398 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:42.409 -08 000000078 INF: ======================================
17-02-28 20:23:42.410 -08 000000101 INF: ===================Camera TDI===================
17-02-28 20:23:42.411 -08 000000101 INF: ======================================
17-02-28 20:23:42.461 -08 000000098 INF: Y Motor: Recv v 4097\r
17-02-28 20:23:42.461 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:42.461 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:42.523 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:23:42.523 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:42.523 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: Recv v 134217728\r
17-02-28 20:23:42.585 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:42.585 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:42.646 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:42.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:42.646 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:42.647 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:42.709 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:23:42.709 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:42.709 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:42.771 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:23:42.771 -08 000000098 INF: ======================================
17-02-28 20:23:42.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:42.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:42.774 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:42.774 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:23:42.831 -08 000000077 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:23:42.831 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:42.896 -08 000000104 INF: FPGA: Recv TDIYERD 1490821
17-02-28 20:23:42.896 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:23:42.958 -08 000000010 INF: FPGA: Recv ZADCR 35609
17-02-28 20:23:42.958 -08 000000042 INF: At scan end Y pos = 14.908 and Z pos = -0.136. Y moved -48.539 mm
17-02-28 20:23:42.958 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:23:43.020 -08 000000082 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:23:43.020 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:23:43.020 -08 000000042 INF: TDIScan finished after 12209.7977 ms
17-02-28 20:23:43.020 -08 000000042 INF: Image[0]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:23:43.020 -08 000000042 INF: Image[2]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:23:43.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.054 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.589 um
17-02-28 20:23:43.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.055 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:23:43.082 -08 000000023 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:23:43.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.083 -08 000000083 INF: ===================Dither Clean Up Command===================
17-02-28 20:23:43.083 -08 000000050 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:23:43.083 -08 000000074 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:23:43.083 -08 000000030 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:23:43.084 -08 000000030 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:23:43.084 -08 000000050 INF: ======================================
17-02-28 20:23:43.084 -08 000000030 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:23:43.084 -08 000000074 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:43.084 -08 000000074 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:43.084 -08 000000046 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:43.084 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:43.085 -08 000000046 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:23:43.087 -08 000000045 INF: ===================LFT:Extracting coords===================
17-02-28 20:23:43.113 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:43.114 -08 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:23:43.114 -08 000000101 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.114 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.115 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.115 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.115 -08 000000101 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:43.115 -08 000000035 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:43.115 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:43.115 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:43.144 -08 000000099 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:43.144 -08 000000099 INF: FPGA: Recv ZSEL 
17-02-28 20:23:43.144 -08 000000046 INF: FPGA: Xmit ZDACW 41084\n
17-02-28 20:23:43.144 -08 000000030 INF: ======================================
17-02-28 20:23:43.147 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:43.147 -08 000000074 INF: ======================================
17-02-28 20:23:43.189 -08 000000101 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:43.189 -08 000000035 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:43.189 -08 000000085 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:43.195 -08 000000082 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:43.208 -08 000000010 INF: FPGA: Recv ZDACW 
17-02-28 20:23:43.209 -08 000000046 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:23:43.209 -08 000000046 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:23:43.268 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:23:43.268 -08 000000046 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:43.269 -08 000000046 INF: ======================================
17-02-28 20:23:43.340 -08 000000101 INF: LFT found best fwhm score 2.000326 in 151 ms
17-02-28 20:23:43.340 -08 000000101 INF: LFT found good score at index 6305 with fwhm value 2.000326. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:4,T
17-02-28 20:23:43.340 -08 000000085 INF: LFT found best fwhm score 2.090536 in 151 ms
17-02-28 20:23:43.340 -08 000000085 INF: LFT found good score at index 2173 with fwhm value 2.090536. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T
17-02-28 20:23:43.340 -08 000000035 INF: LFT found best fwhm score 2.000546 in 151 ms
17-02-28 20:23:43.340 -08 000000035 INF: LFT found good score at index 633 with fwhm value 2.000546. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T
17-02-28 20:23:43.341 -08 000000101 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.341 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.341 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.341 -08 000000101 INF: ======================================
17-02-28 20:23:43.341 -08 000000035 INF: ======================================
17-02-28 20:23:43.341 -08 000000085 INF: ======================================
17-02-28 20:23:43.364 -08 000000082 INF: LFT found best fwhm score 2.000114 in 168 ms
17-02-28 20:23:43.364 -08 000000082 INF: LFT found good score at index 6073 with fwhm value 2.000114. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:4,T
17-02-28 20:23:43.364 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:23:43.364 -08 000000082 INF: ======================================
17-02-28 20:23:43.366 -08 000000045 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:43.367 -08 000000045 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:3,L:4,T
17-02-28 20:23:43.367 -08 000000045 INF: ======================================
17-02-28 20:23:43.368 -08 000000083 INF: ======================================
17-02-28 20:23:43.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:23:43.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Waiting for image analysis===================
17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:23:43.372 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 1 - X = 76.92664 Y = 39.76308===================
17-02-28 20:23:43.395 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:23:43.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:43.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:23:43.396 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:43.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:23:43.396 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:23:43.396 -08 000000042 INF: Transformed XStagePosition from 78.03464 mm to 78.0149724520743 mm.
17-02-28 20:23:43.408 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5565393554289 mm.
17-02-28 20:23:43.408 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3565393554289 mm.
17-02-28 20:23:43.408 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4472893554289 mm.
17-02-28 20:23:43.410 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:23:43.411 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:43.411 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.7 um, section = D_1
17-02-28 20:23:43.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:43.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:43.446 -08 000000102 INF: ===================Move X,Y===================
17-02-28 20:23:43.447 -08 000000102 INF: ===================Move X,Y, Parallel===================
17-02-28 20:23:43.454 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":4,"Tile":1103,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF198","HCSMMF197","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.455 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:43.456 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:23:43.456 -08 000000051 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:23:43.456 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:43.458 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:23:43.458 -08 000000060 INF: ===================MoveEmissionFilters===================
17-02-28 20:23:43.459 -08 000000076 INF: ===================TDI Scan Setup===================
17-02-28 20:23:43.492 -08 000000076 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:43.493 -08 000000077 INF: ===================Move X Motor without settling===================
17-02-28 20:23:43.493 -08 000000077 INF: X Motor: Xmit PR VM\n
17-02-28 20:23:43.493 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:43.494 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:43.494 -08 000000076 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:23:43.495 -08 000000076 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:43.496 -08 000000089 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:43.496 -08 000000089 INF: Y Motor: Moving to 64.5565 mm @25.000 mm/sec, started at 14.9082 mm
17-02-28 20:23:43.496 -08 000000076 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:23:43.496 -08 000000089 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:43.496 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:43.502 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:43.503 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:43.504 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:43.504 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:43.505 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:23:43.505 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:43.506 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:43.506 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:43.507 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:43.508 -08 000000046 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:23:43.508 -08 000000105 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:23:43.509 -08 000000046 INF: ======================================
17-02-28 20:23:43.509 -08 000000105 INF: ======================================
17-02-28 20:23:43.510 -08 000000058 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:23:43.510 -08 000000109 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:23:43.511 -08 000000109 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:23:43.511 -08 000000058 INF: ======================================
17-02-28 20:23:43.511 -08 000000109 INF: ======================================
17-02-28 20:23:43.511 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:23:43.512 -08 000000105 INF: ======================================
17-02-28 20:23:43.512 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:43.513 -08 000000086 INF: ======================================
17-02-28 20:23:43.517 -08 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:23:43.518 -08 000000095 INF: ======================================
17-02-28 20:23:43.520 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:43.522 -08 000000062 INF: ======================================
17-02-28 20:23:43.523 -08 000000062 INF: FPGA: Recv ZSEL 
17-02-28 20:23:43.527 -08 000000076 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:43.527 -08 000000076 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:23:43.534 -08 000000077 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:23:43.534 -08 000000077 INF: X Motor: Xmit PR VI\n
17-02-28 20:23:43.536 -08 000000083 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:23:43.537 -08 000000083 INF: ======================================
17-02-28 20:23:43.537 -08 000000059 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:23:43.537 -08 000000059 INF: ======================================
17-02-28 20:23:43.538 -08 000000052 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:43.539 -08 000000052 INF: ======================================
17-02-28 20:23:43.543 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:43.545 -08 000000099 INF: ======================================
17-02-28 20:23:43.546 -08 000000060 INF: ======================================
17-02-28 20:23:43.582 -08 000000035 INF: FPGA: Recv TDIBB
17-02-28 20:23:43.583 -08 000000076 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Moving to 78.0150 mm @15.000 mm/sec, started at 76.9150 mm
17-02-28 20:23:43.584 -08 000000077 INF: X Motor: Xmit MA 7789\n
17-02-28 20:23:43.587 -08 000000076 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:23:43.587 -08 000000076 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:43.591 -08 000000076 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:23:43.592 -08 000000076 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:23:43.592 -08 000000076 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:23:43.616 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":4,"Tile":1107,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF252","HCSMMF282","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.621 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":4,"Tile":1102,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF234","HCSMMF176","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.622 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":4,"Tile":1105,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF193","HCSMMF276","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.630 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:23:43.630 -08 000000089 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:43.630 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:43.633 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":4,"Tile":1109,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF268","HCSMMF253","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.634 -08 000000101 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":4,"Tile":1104,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF246","HCSMMF283","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.635 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":4,"Tile":1106,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF214","HCSMMF225","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.635 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":4,"Tile":1111,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF257","HCSMMF226","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.636 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":4,"Tile":1114,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF184","HCSMMF243","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.638 -08 000000010 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":4,"Tile":1110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF263","HCSMMF219","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.639 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":4,"Tile":1115,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF273","HCSMMF236","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.639 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":4,"Tile":1101,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF200","HCSMMF229","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.640 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":4,"Tile":1122,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF237","HCSMMF192","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.641 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":4,"Tile":1118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF235","HCSMMF189","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.642 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":4,"Tile":1116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF248","HCSMMF251","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.642 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":4,"Tile":1113,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF182","HCSMMF241","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.644 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:43.644 -08 000000076 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:43.646 -08 000000077 INF: X Motor: Recv MA 7789\r\n>
17-02-28 20:23:43.646 -08 000000077 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:23:43.647 -08 000000076 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:23:43.647 -08 000000076 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:43.650 -08 000000076 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:23:43.650 -08 000000076 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:23:43.650 -08 000000076 INF: Z Motor: Arming to move to -0.1167 mm
17-02-28 20:23:43.650 -08 000000076 INF: FPGA: Xmit ZYT 6435654 4\n
17-02-28 20:23:43.650 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":4,"Tile":1108,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF272","HCSMMF190","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.652 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":4,"Tile":1123,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF247","HCSMMF180","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.653 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":4,"Tile":1124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF267","HCSMMF285","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.660 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":4,"Tile":1112,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF277","HCSMMF258","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.671 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":4,"Tile":1121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF230","HCSMMF261","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.673 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":4,"Tile":1120,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF218","HCSMMF280","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.676 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":4,"Tile":1128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF239","HCSMMF213","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.682 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":4,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF224","HCSMMF240","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.692 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:23:43.692 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:43.696 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":4,"Tile":1117,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF178","HCSMMF233","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.701 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":4,"Tile":1119,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF207","HCSMMF284","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.704 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":4,"Tile":1127,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF228","HCSMMF244","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.707 -08 000000010 INF: FPGA: Recv ZYT 
17-02-28 20:23:43.707 -08 000000076 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490820 enc / 14.908 mm / ) = 6435654 enc / 64.357 mm
17-02-28 20:23:43.708 -08 000000076 INF: FPGA: Xmit ZARM 30598\n
17-02-28 20:23:43.708 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":4,"Tile":1126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF211","HCSMMF286","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:43.714 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:43.720 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:23:43.746 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Recv v 268435456\r
17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x10000000), Bit28=Velocity window exceeded.
17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Set target position to 5955654 encoder counts
17-02-28 20:23:43.754 -08 000000089 INF: Y Motor: Xmit s r0xca 5955654\r
17-02-28 20:23:43.767 -08 000000037 INF: FPGA: Recv ZARM
17-02-28 20:23:43.767 -08 000000076 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.2261 ms
17-02-28 20:23:43.767 -08 000000076 INF: Z Motor: ArmAbsStepped took 116.9095 ms
17-02-28 20:23:43.767 -08 000000076 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:23:43.769 -08 000000076 INF: ===================TDI Scan Setup===================
17-02-28 20:23:43.770 -08 000000076 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:23:43.770 -08 000000076 INF: ===================TDI Scan Setup===================
17-02-28 20:23:43.772 -08 000000076 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:23:43.772 -08 000000076 INF: ===================TDI Scan Setup===================
17-02-28 20:23:43.774 -08 000000076 INF: ======================================
17-02-28 20:23:43.799 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:43.799 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:23:43.818 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:23:43.818 -08 000000089 INF: Y Motor: Start the move command
17-02-28 20:23:43.818 -08 000000089 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:43.832 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:43.835 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:43.841 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:23:43.880 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:23:43.880 -08 000000089 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:23:43.880 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:43.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:43.966 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:43.972 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:23:44.003 -08 000000089 INF: Y Motor: Unshifted Position: 1070627
17-02-28 20:23:44.020 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:23:44.053 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:44.078 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:44.084 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:23:44.092 -08 000000038 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:23:44.092 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:23:44.092 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:44.107 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:44.109 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:23:44.174 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:44.179 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:44.270 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:23:44.271 -08 000000077 INF: X Motor: Xmit PR ER\n
17-02-28 20:23:44.317 -08 000000089 INF: Y Motor: Unshifted Position: 1779989
17-02-28 20:23:44.331 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:23:44.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:44.331 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:23:44.332 -08 000000077 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:23:44.332 -08 000000077 INF: X Motor: Moved to 78.0161 after 686 ms
17-02-28 20:23:44.332 -08 000000077 INF: ======================================
17-02-28 20:23:44.367 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:44.458 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:23:44.490 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:44.629 -08 000000089 INF: Y Motor: Unshifted Position: 2560008
17-02-28 20:23:44.644 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:44.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:44.645 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:44.646 -08 000000018 INF: WaitCommand(40000) start
17-02-28 20:23:44.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 40 of 40 seconds left===================
17-02-28 20:23:44.679 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:44.705 -08 000000038 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:23:44.705 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:23:44.705 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:23:44.720 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:23:44.722 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:23:44.723 -08 000000038 INF: ======================================
17-02-28 20:23:44.724 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:23:44.725 -08 000000051 INF: ======================================
17-02-28 20:23:44.802 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:44.940 -08 000000089 INF: Y Motor: Unshifted Position: 3338282
17-02-28 20:23:44.990 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:45.116 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:45.251 -08 000000089 INF: Y Motor: Unshifted Position: 4116691
17-02-28 20:23:45.301 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:45.427 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:45.565 -08 000000089 INF: Y Motor: Unshifted Position: 4901646
17-02-28 20:23:45.615 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:45.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:45.646 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 39 of 40 seconds left===================
17-02-28 20:23:45.738 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:45.876 -08 000000089 INF: Y Motor: Unshifted Position: 5677914
17-02-28 20:23:45.926 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:46.052 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:46.187 -08 000000089 INF: Y Motor: Unshifted Position: 5955655
17-02-28 20:23:46.187 -08 000000089 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:46.187 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:46.252 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:23:46.252 -08 000000089 INF: Y Motor: Moved to 64.5566 after 2372 ms
17-02-28 20:23:46.252 -08 000000089 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:46.314 -08 000000089 INF: Y Motor: Recv v 4096\r
17-02-28 20:23:46.314 -08 000000089 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:46.314 -08 000000089 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:46.376 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:23:46.376 -08 000000089 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:46.376 -08 000000089 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: Recv v 402653184\r
17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:46.440 -08 000000089 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: Recv v 0\r
17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:46.501 -08 000000089 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:46.563 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:23:46.563 -08 000000089 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:46.563 -08 000000089 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:46.627 -08 000000089 INF: Y Motor: Recv ok\r
17-02-28 20:23:46.627 -08 000000089 INF: ======================================
17-02-28 20:23:46.629 -08 000000102 INF: ===================Move X,Y===================
17-02-28 20:23:46.630 -08 000000102 INF: ======================================
17-02-28 20:23:46.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:46.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:46.632 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:23:46.632 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:23:46.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:46.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 38 of 40 seconds left===================
17-02-28 20:23:46.689 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:23:46.689 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:23:46.703 -08 000000082 INF: FPGA: Recv ZFREQCL
17-02-28 20:23:46.703 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:23:46.703 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:46.703 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:46.764 -08 000000062 INF: FPGA: Recv TDIYERD 6455655
17-02-28 20:23:46.764 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455655 counts (64.557 mm)
17-02-28 20:23:46.764 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:46.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:46.766 -08 000000091 INF: ===================TDI FPGA Arm===================
17-02-28 20:23:46.766 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:23:46.766 -08 000000108 INF: ======================================
17-02-28 20:23:46.766 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:46.767 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:23:46.767 -08 000000091 INF: FPGA: Xmit TDIYPOS 6344729\n
17-02-28 20:23:46.835 -08 000000036 INF: FPGA: Recv TDIYPOS
17-02-28 20:23:46.836 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:46.838 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:23:46.838 -08 000000091 INF: FPGA: Xmit TDIYARM3 139264 6435654 1 1\n
17-02-28 20:23:46.889 -08 000000010 INF: FPGA: Recv TDIYARM3
17-02-28 20:23:46.889 -08 000000091 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:23:46.890 -08 000000091 INF: ===================TDI FPGA Arm===================
17-02-28 20:23:46.891 -08 000000091 INF: ======================================
17-02-28 20:23:46.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:23:46.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:46.893 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:46.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:46.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:46.895 -08 000000090 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:23:46.895 -08 000000090 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:23:46.895 -08 000000090 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:23:46.895 -08 000000090 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:23:46.895 -08 000000090 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:23:46.896 -08 000000036 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:23:46.896 -08 000000036 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:23:46.896 -08 000000036 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:23:46.896 -08 000000036 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:23:46.897 -08 000000036 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:23:47.265 -08 000000083 INF: FPGA: Recv EX2MV
17-02-28 20:23:47.265 -08 000000083 INF: FPGA: Recv EX1MV
17-02-28 20:23:47.265 -08 000000036 INF: Excitation Filter 1: Moved -107 steps in 369.0744 ms
17-02-28 20:23:47.265 -08 000000090 INF: Excitation Filter 2: Moved -107 steps in 369.6637 ms
17-02-28 20:23:47.265 -08 000000036 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.2774 ms
17-02-28 20:23:47.265 -08 000000090 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.807 ms
17-02-28 20:23:47.265 -08 000000036 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.3572 ms
17-02-28 20:23:47.265 -08 000000090 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.9211 ms
17-02-28 20:23:47.266 -08 000000036 INF: ======================================
17-02-28 20:23:47.266 -08 000000090 INF: ======================================
17-02-28 20:23:47.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:47.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:47.269 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:47.269 -08 000000077 INF: ===================FPGA Z Wait===================
17-02-28 20:23:47.269 -08 000000074 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:47.269 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:23:47.269 -08 000000077 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:23:47.269 -08 000000074 INF: Y Motor: Moving to 14.9082 mm @6.500 mm/sec, started at 64.5566 mm
17-02-28 20:23:47.269 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:47.269 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:47.269 -08 000000102 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:23:47.270 -08 000000102 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:23:47.270 -08 000000051 INF: ===================Camera TDI, Parallel===================
17-02-28 20:23:47.271 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:23:47.271 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:23:47.272 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:47.272 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:47.275 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:47.275 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:47.313 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:47.313 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:47.313 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:47.375 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:47.375 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:47.422 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:47.422 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:47.425 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:47.425 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Set target position to 990820 encoder counts
17-02-28 20:23:47.436 -08 000000074 INF: Y Motor: Xmit s r0xca 990820\r
17-02-28 20:23:47.501 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:47.501 -08 000000074 INF: Y Motor: Start the move command
17-02-28 20:23:47.501 -08 000000074 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:47.563 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:47.563 -08 000000074 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:23:47.563 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:47.572 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:47.572 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:47.575 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:23:47.575 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:23:47.642 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:23:47.642 -08 000000077 INF: ======================================
17-02-28 20:23:47.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:47.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 37 of 40 seconds left===================
17-02-28 20:23:47.686 -08 000000074 INF: Y Motor: Unshifted Position: 5895323
17-02-28 20:23:47.722 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:47.722 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:47.722 -08 000000076 INF: ===================Camera #0 Frame #5===================
17-02-28 20:23:47.725 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:23:47.725 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:23:47.725 -08 000000050 INF: ===================Camera #2 Frame #5===================
17-02-28 20:23:47.736 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:47.862 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:47.888 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:23:47.888 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:23:47.888 -08 000000076 INF: ===================Camera #0 Frame #11===================
17-02-28 20:23:47.891 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:23:47.891 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:23:47.891 -08 000000050 INF: ===================Camera #2 Frame #11===================
17-02-28 20:23:47.998 -08 000000074 INF: Y Motor: Unshifted Position: 5691001
17-02-28 20:23:48.048 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:48.061 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:23:48.061 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:23:48.061 -08 000000076 INF: ===================Camera #0 Frame #18===================
17-02-28 20:23:48.069 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:23:48.069 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:23:48.069 -08 000000050 INF: ===================Camera #2 Frame #18===================
17-02-28 20:23:48.174 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:48.232 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:23:48.232 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:23:48.232 -08 000000076 INF: ===================Camera #0 Frame #24===================
17-02-28 20:23:48.241 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:23:48.241 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:23:48.241 -08 000000050 INF: ===================Camera #2 Frame #24===================
17-02-28 20:23:48.310 -08 000000074 INF: Y Motor: Unshifted Position: 5487988
17-02-28 20:23:48.360 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:48.408 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:23:48.408 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:23:48.408 -08 000000076 INF: ===================Camera #0 Frame #30===================
17-02-28 20:23:48.419 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:23:48.419 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:23:48.419 -08 000000050 INF: ===================Camera #2 Frame #31===================
17-02-28 20:23:48.486 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:48.576 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:23:48.576 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:23:48.576 -08 000000076 INF: ===================Camera #0 Frame #37===================
17-02-28 20:23:48.596 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:23:48.596 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:23:48.596 -08 000000050 INF: ===================Camera #2 Frame #37===================
17-02-28 20:23:48.623 -08 000000074 INF: Y Motor: Unshifted Position: 5286488
17-02-28 20:23:48.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:48.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 36 of 40 seconds left===================
17-02-28 20:23:48.673 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:48.747 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:23:48.747 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:23:48.747 -08 000000076 INF: ===================Camera #0 Frame #43===================
17-02-28 20:23:48.775 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:23:48.775 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:23:48.775 -08 000000050 INF: ===================Camera #2 Frame #44===================
17-02-28 20:23:48.796 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:48.915 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:23:48.915 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:23:48.915 -08 000000076 INF: ===================Camera #0 Frame #49===================
17-02-28 20:23:48.935 -08 000000074 INF: Y Motor: Unshifted Position: 5083680
17-02-28 20:23:48.959 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 50, frameCount = 51.
17-02-28 20:23:48.959 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 51
17-02-28 20:23:48.959 -08 000000050 INF: ===================Camera #2 Frame #51===================
17-02-28 20:23:48.985 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.091 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:23:49.091 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:23:49.091 -08 000000076 INF: ===================Camera #0 Frame #56===================
17-02-28 20:23:49.108 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.141 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:23:49.141 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:23:49.141 -08 000000050 INF: ===================Camera #2 Frame #57===================
17-02-28 20:23:49.247 -08 000000074 INF: Y Motor: Unshifted Position: 4880669
17-02-28 20:23:49.272 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:23:49.272 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:23:49.272 -08 000000076 INF: ===================Camera #0 Frame #62===================
17-02-28 20:23:49.297 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.320 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:23:49.320 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:23:49.320 -08 000000050 INF: ===================Camera #2 Frame #64===================
17-02-28 20:23:49.420 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.440 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:23:49.440 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:23:49.440 -08 000000076 INF: ===================Camera #0 Frame #68===================
17-02-28 20:23:49.503 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71.
17-02-28 20:23:49.503 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71
17-02-28 20:23:49.503 -08 000000050 INF: ===================Camera #2 Frame #71===================
17-02-28 20:23:49.560 -08 000000074 INF: Y Motor: Unshifted Position: 4677870
17-02-28 20:23:49.610 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.616 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:23:49.616 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:23:49.616 -08 000000076 INF: ===================Camera #0 Frame #75===================
17-02-28 20:23:49.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:49.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 35 of 40 seconds left===================
17-02-28 20:23:49.687 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:23:49.687 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:23:49.687 -08 000000050 INF: ===================Camera #2 Frame #77===================
17-02-28 20:23:49.733 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.796 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:23:49.796 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:23:49.796 -08 000000076 INF: ===================Camera #0 Frame #81===================
17-02-28 20:23:49.865 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84.
17-02-28 20:23:49.865 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84
17-02-28 20:23:49.865 -08 000000050 INF: ===================Camera #2 Frame #84===================
17-02-28 20:23:49.872 -08 000000074 INF: Y Motor: Unshifted Position: 4474186
17-02-28 20:23:49.922 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:49.966 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:23:49.966 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:23:49.966 -08 000000076 INF: ===================Camera #0 Frame #88===================
17-02-28 20:23:50.045 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.048 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:23:50.048 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:23:50.048 -08 000000050 INF: ===================Camera #2 Frame #91===================
17-02-28 20:23:50.138 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:23:50.138 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:23:50.138 -08 000000076 INF: ===================Camera #0 Frame #94===================
17-02-28 20:23:50.184 -08 000000074 INF: Y Motor: Unshifted Position: 4271390
17-02-28 20:23:50.221 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 96, frameCount = 97.
17-02-28 20:23:50.221 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 97
17-02-28 20:23:50.221 -08 000000050 INF: ===================Camera #2 Frame #97===================
17-02-28 20:23:50.234 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.307 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:23:50.307 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:23:50.307 -08 000000076 INF: ===================Camera #0 Frame #100===================
17-02-28 20:23:50.357 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.391 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 102, frameCount = 103.
17-02-28 20:23:50.391 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 103
17-02-28 20:23:50.391 -08 000000050 INF: ===================Camera #2 Frame #103===================
17-02-28 20:23:50.475 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:23:50.475 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:23:50.475 -08 000000076 INF: ===================Camera #0 Frame #106===================
17-02-28 20:23:50.496 -08 000000074 INF: Y Motor: Unshifted Position: 4068370
17-02-28 20:23:50.546 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.560 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:23:50.560 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:23:50.560 -08 000000050 INF: ===================Camera #2 Frame #110===================
17-02-28 20:23:50.643 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:23:50.643 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:23:50.643 -08 000000076 INF: ===================Camera #0 Frame #113===================
17-02-28 20:23:50.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:50.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 34 of 40 seconds left===================
17-02-28 20:23:50.668 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.732 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:23:50.732 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:23:50.732 -08 000000050 INF: ===================Camera #2 Frame #116===================
17-02-28 20:23:50.807 -08 000000074 INF: Y Motor: Unshifted Position: 3866223
17-02-28 20:23:50.815 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:23:50.815 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:23:50.815 -08 000000076 INF: ===================Camera #0 Frame #119===================
17-02-28 20:23:50.857 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.902 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 121, frameCount = 122.
17-02-28 20:23:50.902 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 122
17-02-28 20:23:50.902 -08 000000050 INF: ===================Camera #2 Frame #122===================
17-02-28 20:23:50.980 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:50.983 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:23:50.983 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:23:50.983 -08 000000076 INF: ===================Camera #0 Frame #125===================
17-02-28 20:23:51.071 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128.
17-02-28 20:23:51.071 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128
17-02-28 20:23:51.071 -08 000000050 INF: ===================Camera #2 Frame #128===================
17-02-28 20:23:51.119 -08 000000074 INF: Y Motor: Unshifted Position: 3663201
17-02-28 20:23:51.152 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:23:51.152 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:23:51.152 -08 000000076 INF: ===================Camera #0 Frame #131===================
17-02-28 20:23:51.169 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:51.240 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:23:51.240 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:23:51.240 -08 000000050 INF: ===================Camera #2 Frame #135===================
17-02-28 20:23:51.292 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:51.321 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:23:51.321 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:23:51.321 -08 000000076 INF: ===================Camera #0 Frame #138===================
17-02-28 20:23:51.412 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141.
17-02-28 20:23:51.412 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141
17-02-28 20:23:51.412 -08 000000050 INF: ===================Camera #2 Frame #141===================
17-02-28 20:23:51.431 -08 000000074 INF: Y Motor: Unshifted Position: 3460409
17-02-28 20:23:51.481 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:51.492 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:23:51.492 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:23:51.492 -08 000000076 INF: ===================Camera #0 Frame #144===================
17-02-28 20:23:51.582 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147.
17-02-28 20:23:51.582 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147
17-02-28 20:23:51.582 -08 000000050 INF: ===================Camera #2 Frame #147===================
17-02-28 20:23:51.604 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:51.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:51.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 33 of 40 seconds left===================
17-02-28 20:23:51.660 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:23:51.660 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:23:51.660 -08 000000076 INF: ===================Camera #0 Frame #150===================
17-02-28 20:23:51.744 -08 000000074 INF: Y Motor: Unshifted Position: 3256742
17-02-28 20:23:51.751 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:23:51.751 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:23:51.751 -08 000000050 INF: ===================Camera #2 Frame #153===================
17-02-28 20:23:51.794 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:51.829 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:23:51.829 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:23:51.829 -08 000000076 INF: ===================Camera #0 Frame #156===================
17-02-28 20:23:51.917 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:51.920 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:23:51.920 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:23:51.920 -08 000000050 INF: ===================Camera #2 Frame #160===================
17-02-28 20:23:51.997 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:23:51.997 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:23:51.997 -08 000000076 INF: ===================Camera #0 Frame #163===================
17-02-28 20:23:52.056 -08 000000074 INF: Y Motor: Unshifted Position: 3053944
17-02-28 20:23:52.092 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:23:52.092 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:23:52.092 -08 000000050 INF: ===================Camera #2 Frame #166===================
17-02-28 20:23:52.106 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:52.168 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:23:52.168 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:23:52.168 -08 000000076 INF: ===================Camera #0 Frame #169===================
17-02-28 20:23:52.229 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:52.261 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:23:52.261 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:23:52.261 -08 000000050 INF: ===================Camera #2 Frame #172===================
17-02-28 20:23:52.336 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:23:52.336 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:23:52.336 -08 000000076 INF: ===================Camera #0 Frame #175===================
17-02-28 20:23:52.365 -08 000000074 INF: Y Motor: Unshifted Position: 2850933
17-02-28 20:23:52.415 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:52.430 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:23:52.430 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:23:52.430 -08 000000050 INF: ===================Camera #2 Frame #178===================
17-02-28 20:23:52.504 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:23:52.504 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:23:52.504 -08 000000076 INF: ===================Camera #0 Frame #181===================
17-02-28 20:23:52.541 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:52.599 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:23:52.599 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:23:52.599 -08 000000050 INF: ===================Camera #2 Frame #185===================
17-02-28 20:23:52.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:52.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 32 of 40 seconds left===================
17-02-28 20:23:52.673 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:23:52.673 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:23:52.673 -08 000000076 INF: ===================Camera #0 Frame #187===================
17-02-28 20:23:52.679 -08 000000074 INF: Y Motor: Unshifted Position: 2648785
17-02-28 20:23:52.729 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:52.771 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:23:52.771 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:23:52.771 -08 000000050 INF: ===================Camera #2 Frame #191===================
17-02-28 20:23:52.841 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:23:52.841 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:23:52.841 -08 000000076 INF: ===================Camera #0 Frame #194===================
17-02-28 20:23:52.852 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:52.940 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:23:52.940 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:23:52.940 -08 000000050 INF: ===================Camera #2 Frame #197===================
17-02-28 20:23:52.991 -08 000000074 INF: Y Motor: Unshifted Position: 2445768
17-02-28 20:23:53.012 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:23:53.012 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:23:53.012 -08 000000076 INF: ===================Camera #0 Frame #200===================
17-02-28 20:23:53.041 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:53.109 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:23:53.109 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:23:53.109 -08 000000050 INF: ===================Camera #2 Frame #203===================
17-02-28 20:23:53.164 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:53.180 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:23:53.180 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:23:53.180 -08 000000076 INF: ===================Camera #0 Frame #206===================
17-02-28 20:23:53.278 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:23:53.278 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:23:53.278 -08 000000050 INF: ===================Camera #2 Frame #210===================
17-02-28 20:23:53.303 -08 000000074 INF: Y Motor: Unshifted Position: 2242972
17-02-28 20:23:53.348 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:23:53.348 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:23:53.348 -08 000000076 INF: ===================Camera #0 Frame #212===================
17-02-28 20:23:53.353 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:53.450 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:23:53.450 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:23:53.450 -08 000000050 INF: ===================Camera #2 Frame #216===================
17-02-28 20:23:53.476 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:53.516 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:23:53.516 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:23:53.516 -08 000000076 INF: ===================Camera #0 Frame #218===================
17-02-28 20:23:53.613 -08 000000074 INF: Y Motor: Unshifted Position: 2039956
17-02-28 20:23:53.619 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:23:53.619 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:23:53.619 -08 000000050 INF: ===================Camera #2 Frame #222===================
17-02-28 20:23:53.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:53.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 31 of 40 seconds left===================
17-02-28 20:23:53.663 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:53.684 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:23:53.684 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:23:53.684 -08 000000076 INF: ===================Camera #0 Frame #225===================
17-02-28 20:23:53.787 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:23:53.787 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:23:53.787 -08 000000050 INF: ===================Camera #2 Frame #228===================
17-02-28 20:23:53.789 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:53.855 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:23:53.855 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:23:53.855 -08 000000076 INF: ===================Camera #0 Frame #231===================
17-02-28 20:23:53.925 -08 000000074 INF: Y Motor: Unshifted Position: 1836503
17-02-28 20:23:53.956 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:23:53.956 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:23:53.956 -08 000000050 INF: ===================Camera #2 Frame #235===================
17-02-28 20:23:53.975 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.023 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:23:54.023 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:23:54.023 -08 000000076 INF: ===================Camera #0 Frame #237===================
17-02-28 20:23:54.101 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.128 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:23:54.128 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:23:54.128 -08 000000050 INF: ===================Camera #2 Frame #241===================
17-02-28 20:23:54.191 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:23:54.191 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:23:54.191 -08 000000076 INF: ===================Camera #0 Frame #243===================
17-02-28 20:23:54.237 -08 000000074 INF: Y Motor: Unshifted Position: 1633481
17-02-28 20:23:54.287 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.297 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:23:54.297 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:23:54.297 -08 000000050 INF: ===================Camera #2 Frame #247===================
17-02-28 20:23:54.359 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:23:54.359 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:23:54.359 -08 000000076 INF: ===================Camera #0 Frame #249===================
17-02-28 20:23:54.413 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.466 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:23:54.466 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:23:54.466 -08 000000050 INF: ===================Camera #2 Frame #253===================
17-02-28 20:23:54.528 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:23:54.528 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:23:54.528 -08 000000076 INF: ===================Camera #0 Frame #256===================
17-02-28 20:23:54.549 -08 000000074 INF: Y Motor: Unshifted Position: 1430465
17-02-28 20:23:54.599 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.635 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:23:54.635 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:23:54.635 -08 000000050 INF: ===================Camera #2 Frame #260===================
17-02-28 20:23:54.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:54.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 30 of 40 seconds left===================
17-02-28 20:23:54.701 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:23:54.701 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:23:54.701 -08 000000076 INF: ===================Camera #0 Frame #262===================
17-02-28 20:23:54.724 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.807 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:23:54.807 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:23:54.807 -08 000000050 INF: ===================Camera #2 Frame #266===================
17-02-28 20:23:54.863 -08 000000074 INF: Y Motor: Unshifted Position: 1228301
17-02-28 20:23:54.871 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:23:54.871 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:23:54.871 -08 000000076 INF: ===================Camera #0 Frame #268===================
17-02-28 20:23:54.913 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:54.976 -08 000000050 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:54.976 -08 000000050 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:54.976 -08 000000050 INF: ===================Camera #2 Frame #272===================
17-02-28 20:23:54.995 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:54.996 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:55.003 -08 000000072 INF: FPGA: Recv TDIYWAIT
17-02-28 20:23:55.003 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:55.004 -08 000000102 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:23:55.005 -08 000000066 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:23:55.005 -08 000000010 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:23:55.005 -08 000000066 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:23:55.005 -08 000000066 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:23:55.006 -08 000000066 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:23:55.006 -08 000000066 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:23:55.006 -08 000000010 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:23:55.006 -08 000000010 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:23:55.006 -08 000000010 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:23:55.007 -08 000000010 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:23:55.036 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:55.155 -08 000000050 INF: Camera #2 ReleaseBuffer
17-02-28 20:23:55.155 -08 000000076 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:23:55.155 -08 000000076 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:23:55.155 -08 000000076 INF: ===================Camera #0 Frame #272===================
17-02-28 20:23:55.155 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:23:55.167 -08 000000076 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:23:55.168 -08 000000076 INF: ===================CameraTDI Cleanup===================
17-02-28 20:23:55.175 -08 000000074 INF: Y Motor: Unshifted Position: 1025296
17-02-28 20:23:55.185 -08 000000050 INF: ======================================
17-02-28 20:23:55.225 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:55.302 -08 000000076 INF: Camera #0 ReleaseBuffer
17-02-28 20:23:55.302 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:23:55.332 -08 000000076 INF: ======================================
17-02-28 20:23:55.334 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:23:55.335 -08 000000051 INF: ======================================
17-02-28 20:23:55.362 -08 000000074 INF: Y Motor: Unshifted Position: 990820
17-02-28 20:23:55.362 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:23:55.362 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:55.375 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:23:55.375 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:23:55.375 -08 000000066 INF: Excitation Filter 1: Moved 107 steps in 369.2774 ms
17-02-28 20:23:55.375 -08 000000066 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.4037 ms
17-02-28 20:23:55.375 -08 000000066 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.4812 ms
17-02-28 20:23:55.375 -08 000000010 INF: Excitation Filter 2: Moved 107 steps in 369.1269 ms
17-02-28 20:23:55.375 -08 000000010 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.5214 ms
17-02-28 20:23:55.375 -08 000000010 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.6218 ms
17-02-28 20:23:55.375 -08 000000066 INF: ======================================
17-02-28 20:23:55.375 -08 000000010 INF: ======================================
17-02-28 20:23:55.377 -08 000000102 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:23:55.378 -08 000000102 INF: ======================================
17-02-28 20:23:55.423 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:23:55.423 -08 000000074 INF: Y Motor: Moved to 14.9082 after 7860 ms
17-02-28 20:23:55.423 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:23:55.487 -08 000000074 INF: Y Motor: Recv v 4097\r
17-02-28 20:23:55.487 -08 000000074 INF: Y Motor: Status After move finished OK:
17-02-28 20:23:55.487 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:55.548 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:23:55.548 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:55.548 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:23:55.610 -08 000000074 INF: Y Motor: Recv v 134217728\r
17-02-28 20:23:55.610 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:23:55.610 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:23:55.610 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:23:55.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:55.647 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 29 of 40 seconds left===================
17-02-28 20:23:55.675 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:23:55.675 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:23:55.675 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:23:55.675 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:55.736 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:55.736 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:23:55.736 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:55.797 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:23:55.797 -08 000000074 INF: ======================================
17-02-28 20:23:55.798 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:55.799 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:23:55.800 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:55.800 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:23:55.874 -08 000000109 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:23:55.874 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:23:55.936 -08 000000058 INF: FPGA: Recv TDIYERD 1490821
17-02-28 20:23:55.936 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:23:56.000 -08 000000100 INF: FPGA: Recv ZADCR 35709
17-02-28 20:23:56.000 -08 000000042 INF: At scan end Y pos = 14.908 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:23:56.000 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:23:56.061 -08 000000066 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:23:56.061 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:23:56.061 -08 000000042 INF: TDIScan finished after 12664.2 ms
17-02-28 20:23:56.061 -08 000000042 INF: Image[0]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:23:56.061 -08 000000042 INF: Image[2]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:23:56.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.097 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.468 um
17-02-28 20:23:56.097 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.098 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:23:56.123 -08 000000100 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:23:56.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.124 -08 000000108 INF: ===================Dither Clean Up Command===================
17-02-28 20:23:56.124 -08 000000076 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:23:56.124 -08 000000037 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:23:56.124 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:23:56.125 -08 000000076 INF: ======================================
17-02-28 20:23:56.125 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:23:56.125 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:23:56.125 -08 000000037 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:56.125 -08 000000037 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:56.125 -08 000000074 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:56.125 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:56.126 -08 000000074 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:23:56.128 -08 000000010 INF: ===================LFT:Extracting coords===================
17-02-28 20:23:56.154 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:56.154 -08 000000010 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:23:56.155 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.155 -08 000000101 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.155 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.156 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.156 -08 000000062 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:56.156 -08 000000101 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:56.156 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:56.156 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-02-28 20:23:56.173 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:23:56.173 -08 000000037 INF: ======================================
17-02-28 20:23:56.186 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:56.186 -08 000000039 INF: FPGA: Recv ZSEL 
17-02-28 20:23:56.186 -08 000000074 INF: FPGA: Xmit ZDACW 41084\n
17-02-28 20:23:56.186 -08 000000086 INF: ======================================
17-02-28 20:23:56.230 -08 000000062 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:56.230 -08 000000101 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:56.230 -08 000000083 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:56.232 -08 000000069 INF: FC:B, C:3,L:4, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:23:56.248 -08 000000037 INF: FPGA: Recv ZDACW 
17-02-28 20:23:56.249 -08 000000074 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:23:56.249 -08 000000074 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:23:56.312 -08 000000091 INF: FPGA: Recv TDIBB
17-02-28 20:23:56.312 -08 000000074 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:23:56.313 -08 000000074 INF: ======================================
17-02-28 20:23:56.382 -08 000000062 INF: LFT found best fwhm score 2.000073 in 151 ms
17-02-28 20:23:56.382 -08 000000062 INF: LFT found good score at index 2969 with fwhm value 2.000073. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T
17-02-28 20:23:56.382 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.383 -08 000000101 INF: LFT found best fwhm score 2.000178 in 152 ms
17-02-28 20:23:56.383 -08 000000062 INF: ======================================
17-02-28 20:23:56.383 -08 000000101 INF: LFT found good score at index 4469 with fwhm value 2.000178. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T
17-02-28 20:23:56.383 -08 000000083 INF: LFT found best fwhm score 2.000429 in 152 ms
17-02-28 20:23:56.383 -08 000000083 INF: LFT found good score at index 6997 with fwhm value 2.000429. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:4,T
17-02-28 20:23:56.383 -08 000000101 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.383 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.383 -08 000000101 INF: ======================================
17-02-28 20:23:56.383 -08 000000083 INF: ======================================
17-02-28 20:23:56.389 -08 000000069 INF: LFT found best fwhm score 2.191851 in 156 ms
17-02-28 20:23:56.389 -08 000000069 INF: LFT found good score at index 4321 with fwhm value 2.191851. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:4,T
17-02-28 20:23:56.389 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:23:56.389 -08 000000069 INF: ======================================
17-02-28 20:23:56.391 -08 000000010 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:23:56.391 -08 000000010 INF: LFT weighted average best Z for top surface is at -0.159mm FC:B, C:3,L:4,T
17-02-28 20:23:56.392 -08 000000010 INF: ======================================
17-02-28 20:23:56.393 -08 000000108 INF: ======================================
17-02-28 20:23:56.394 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.395 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:23:56.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:23:56.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:23:56.396 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:23:56.397 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 29 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:23:56.397 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 29 of 40 seconds left===================
17-02-28 20:23:56.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:23:56.397 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4, Swath 2 - X = 78.03464 Y = 39.76308===================
17-02-28 20:23:56.419 -08 000000042 INF: Waited 22 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:23:56.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:56.420 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:56.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:56.420 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:23:56.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 4===================
17-02-28 20:23:56.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:23:56.437 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:56.438 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:56.438 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:23:56.438 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:23:56.482 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":4,"Tile":1201,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF284","HCSMMF188","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.595 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:23:56.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:56.596 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:23:56.597 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:23:56.598 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":4,"Tile":1208,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF258","HCSMMF182","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:56.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 28 of 40 seconds left===================
17-02-28 20:23:56.721 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":4,"Tile":1206,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF280","HCSMMF261","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.723 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":4,"Tile":1202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF221","HCSMMF269","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.724 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":4,"Tile":1210,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF275","HCSMMF191","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.726 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":4,"Tile":1207,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF250","HCSMMF230","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.727 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":4,"Tile":1209,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF216","HCSMMF273","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.729 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":4,"Tile":1204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF204","HCSMMF187","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.730 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":4,"Tile":1203,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF181","HCSMMF210","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.731 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":4,"Tile":1213,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF227","HCSMMF251","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.732 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":4,"Tile":1214,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF272","HCSMMF199","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.733 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":4,"Tile":1211,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF243","HCSMMF184","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.733 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":4,"Tile":1216,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF196","HCSMMF265","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.734 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":4,"Tile":1212,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF189","HCSMMF278","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.735 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":4,"Tile":1205,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF178","HCSMMF212","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.735 -08 000000060 INF: RunCopyService queue size at 2/28/2017 8:23:56 PM is 2
17-02-28 20:23:56.735 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":4,"Tile":1215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF179","HCSMMF242","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.736 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":4,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF213","HCSMMF239","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.737 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":4,"Tile":1222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF257","HCSMMF262","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.738 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":4,"Tile":1221,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF176","HCSMMF271","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.739 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":4,"Tile":1218,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF183","HCSMMF247","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.740 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":4,"Tile":1225,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF206","HCSMMF240","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.740 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":4,"Tile":1223,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF202","HCSMMF253","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.741 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":4,"Tile":1224,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF234","HCSMMF246","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.742 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":4,"Tile":1217,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF238","HCSMMF223","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.744 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":4,"Tile":1220,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF254","HCSMMF185","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.745 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":4,"Tile":1227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF232","HCSMMF200","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.745 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":4,"Tile":1228,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF219","HCSMMF263","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.746 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":4,"Tile":1226,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF268","HCSMMF198","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:23:56.748 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:56.754 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:23:56.862 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:56.862 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:23:56.901 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:56.907 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:23:57.015 -08 000000059 INF: FPGA: Recv MIOCOMPR
17-02-28 20:23:57.015 -08 000000042 INF: Compensator: Moved OutOfPath in 418 ms
17-02-28 20:23:57.015 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:23:57.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:57.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:57.017 -08 000000062 INF: ===================Move Tilt Motor 1===================
17-02-28 20:23:57.017 -08 000000090 INF: ===================Move Tilt Motor 2===================
17-02-28 20:23:57.017 -08 000000046 INF: ===================Move Tilt Motor 3===================
17-02-28 20:23:57.018 -08 000000062 INF: ======================================
17-02-28 20:23:57.018 -08 000000046 INF: ======================================
17-02-28 20:23:57.018 -08 000000090 INF: ======================================
17-02-28 20:23:57.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:57.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:23:57.026 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:23:57.035 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:23:57.035 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:23:57.035 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:23:57.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:23:57.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:23:57.039 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:23:57.039 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:23:57.039 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:23:57.077 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:57.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:23:57.077 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:23:57.077 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1567 mm
17-02-28 20:23:57.078 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:23:57.098 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:57.103 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:23:57.141 -08 000000060 INF: FPGA: Recv ZTRG 
17-02-28 20:23:57.141 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:23:57.200 -08 000000100 INF: FPGA: Recv ZYT 
17-02-28 20:23:57.200 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:23:57.200 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:23:57.201 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:57.207 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:23:57.267 -08 000000058 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:23:57.267 -08 000000058 INF: FPGA: Recv ZMV 
17-02-28 20:23:57.268 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 67.6513 ms
17-02-28 20:23:57.268 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:23:57.268 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:23:57.303 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:23:57.326 -08 000000045 INF: FPGA: Recv ZDACR 60292
17-02-28 20:23:57.326 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.4378 ms w/comms
17-02-28 20:23:57.326 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:23:57.326 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.6336 ms
17-02-28 20:23:57.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:23:57.327 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:23:57.336 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:23:57.336 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:57.336 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:57.336 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:23:57.336 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:23:57.389 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:23:57.409 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:23:57.409 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:23:57.418 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:23:57.418 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:57.418 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:23:57.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:57.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:23:57.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:23:57.421 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:23:57.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:57.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:23:57.422 -08 000000059 INF: ===================MoveEmissionFilters===================
17-02-28 20:23:57.422 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:23:57.423 -08 000000091 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:57.423 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:57.423 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:57.423 -08 000000090 INF: ===================Move X,Y, Parallel===================
17-02-28 20:23:57.423 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:57.424 -08 000000091 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:57.424 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:23:57.424 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:57.424 -08 000000105 INF: ===================Move X Motor without settling===================
17-02-28 20:23:57.424 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:23:57.424 -08 000000105 INF: X Motor: Xmit PR VM\n
17-02-28 20:23:57.424 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:23:57.425 -08 000000066 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9082 mm
17-02-28 20:23:57.425 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:23:57.425 -08 000000046 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:23:57.425 -08 000000072 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:23:57.425 -08 000000098 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:23:57.425 -08 000000102 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:23:57.425 -08 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:23:57.425 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:23:57.425 -08 000000076 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:23:57.425 -08 000000077 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:23:57.425 -08 000000102 INF: ======================================
17-02-28 20:23:57.426 -08 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:23:57.426 -08 000000076 INF: ======================================
17-02-28 20:23:57.426 -08 000000082 INF: ======================================
17-02-28 20:23:57.426 -08 000000086 INF: ======================================
17-02-28 20:23:57.426 -08 000000077 INF: ======================================
17-02-28 20:23:57.427 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:23:57.428 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:23:57.428 -08 000000072 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:23:57.428 -08 000000046 INF: ======================================
17-02-28 20:23:57.428 -08 000000072 INF: ======================================
17-02-28 20:23:57.428 -08 000000098 INF: ======================================
17-02-28 20:23:57.428 -08 000000033 INF: ======================================
17-02-28 20:23:57.429 -08 000000069 INF: ======================================
17-02-28 20:23:57.430 -08 000000091 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:23:57.430 -08 000000108 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:23:57.431 -08 000000091 INF: ======================================
17-02-28 20:23:57.431 -08 000000108 INF: ======================================
17-02-28 20:23:57.432 -08 000000059 INF: ======================================
17-02-28 20:23:57.452 -08 000000105 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:23:57.452 -08 000000105 INF: X Motor: Xmit PR VI\n
17-02-28 20:23:57.516 -08 000000105 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:23:57.516 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:57.516 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:23:57.516 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:23:57.516 -08 000000105 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:23:57.516 -08 000000105 INF: X Motor: Moving to 80.2456 mm @15.000 mm/sec, started at 78.0161 mm
17-02-28 20:23:57.516 -08 000000105 INF: X Motor: Xmit MA 8702\n
17-02-28 20:23:57.578 -08 000000105 INF: X Motor: Recv MA 8702\r\n>
17-02-28 20:23:57.578 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:57.578 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:23:57.578 -08 000000105 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:23:57.592 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:23:57.639 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:23:57.639 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:23:57.639 -08 000000066 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:23:57.639 -08 000000066 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:23:57.701 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:57.701 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:23:57.701 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:23:57.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:57.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 27 of 40 seconds left===================
17-02-28 20:23:57.764 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:23:57.764 -08 000000066 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:23:57.764 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:57.890 -08 000000066 INF: Y Motor: Unshifted Position: 1076213
17-02-28 20:23:57.940 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:58.063 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:58.201 -08 000000066 INF: Y Motor: Unshifted Position: 1783317
17-02-28 20:23:58.201 -08 000000105 INF: X Motor: Xmit PR ER\n
17-02-28 20:23:58.251 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:58.267 -08 000000105 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:23:58.267 -08 000000105 INF: X Motor: Moved to 80.2451 after 689 ms
17-02-28 20:23:58.267 -08 000000105 INF: ======================================
17-02-28 20:23:58.377 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:58.515 -08 000000066 INF: Y Motor: Unshifted Position: 2560840
17-02-28 20:23:58.565 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:58.689 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:58.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:58.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 26 of 40 seconds left===================
17-02-28 20:23:58.827 -08 000000066 INF: Y Motor: Unshifted Position: 3341611
17-02-28 20:23:58.877 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.000 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.138 -08 000000066 INF: Y Motor: Unshifted Position: 4127515
17-02-28 20:23:59.188 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.311 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.449 -08 000000066 INF: Y Motor: Unshifted Position: 4904965
17-02-28 20:23:59.499 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.627 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:23:59.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 25 of 40 seconds left===================
17-02-28 20:23:59.761 -08 000000066 INF: Y Motor: Unshifted Position: 5680882
17-02-28 20:23:59.811 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:23:59.937 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:00.076 -08 000000066 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:24:00.076 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:00.076 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:00.136 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:00.136 -08 000000066 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-02-28 20:24:00.136 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:00.198 -08 000000066 INF: Y Motor: Recv v 4096\r
17-02-28 20:24:00.198 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:00.198 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:00.260 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:00.260 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:00.260 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:00.324 -08 000000066 INF: Y Motor: Recv v 402653184\r
17-02-28 20:24:00.324 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:24:00.324 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:00.324 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:00.387 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:00.387 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:00.387 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:00.387 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:00.448 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:00.448 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:00.448 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:00.511 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:00.511 -08 000000066 INF: ======================================
17-02-28 20:24:00.512 -08 000000090 INF: ===================Move X,Y===================
17-02-28 20:24:00.514 -08 000000090 INF: ======================================
17-02-28 20:24:00.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:00.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:00.516 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:24:00.516 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:24:00.574 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:00.574 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:24:00.634 -08 000000066 INF: FPGA: Recv ZFREQCL
17-02-28 20:24:00.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:24:00.635 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:00.635 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:00.695 -08 000000091 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:24:00.695 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:24:00.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:00.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:00.697 -08 000000078 INF: ===================Set YMotor gains for scans===================
17-02-28 20:24:00.697 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:24:00.697 -08 000000078 INF: ======================================
17-02-28 20:24:00.698 -08 000000039 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:24:00.699 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:24:00.701 -08 000000039 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:24:00.702 -08 000000039 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:24:00.702 -08 000000039 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:24:00.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:00.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 24 of 40 seconds left===================
17-02-28 20:24:00.757 -08 000000102 INF: FPGA: Recv TDIYPOS
17-02-28 20:24:00.757 -08 000000039 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:24:00.759 -08 000000039 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:24:00.759 -08 000000039 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:24:00.819 -08 000000050 INF: FPGA: Recv TDIYARM2
17-02-28 20:24:00.819 -08 000000039 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:24:00.821 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:24:00.824 -08 000000039 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:24:00.824 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:24:00.826 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:24:00.827 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:24:00.829 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:01.201 -08 000000039 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:24:01.201 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:24:01.201 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:01.216 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:24:01.218 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:01.596 -08 000000039 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:24:01.596 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:24:01.596 -08 000000039 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:01.611 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:24:01.613 -08 000000039 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:24:01.614 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:24:01.615 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:01.616 -08 000000039 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:24:01.616 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:01.618 -08 000000039 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:24:01.618 -08 000000039 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:24:01.618 -08 000000039 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:24:01.618 -08 000000039 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:24:01.632 -08 000000108 INF: FPGA: Recv ZYT 
17-02-28 20:24:01.632 -08 000000039 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:24:01.632 -08 000000039 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:24:01.693 -08 000000089 INF: FPGA: Recv ZARM
17-02-28 20:24:01.693 -08 000000039 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.9057 ms
17-02-28 20:24:01.693 -08 000000039 INF: Z Motor: ArmAbsStepped took 74.8877 ms
17-02-28 20:24:01.693 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:01.694 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:24:01.696 -08 000000039 INF: ======================================
17-02-28 20:24:01.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:01.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:01.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:01.698 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:01.699 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:01.700 -08 000000052 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:24:01.700 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:24:01.700 -08 000000052 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:24:01.700 -08 000000052 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:24:01.700 -08 000000052 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:24:01.700 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:24:01.700 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:24:01.700 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:24:01.700 -08 000000052 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:24:01.701 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:24:01.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:01.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 23 of 40 seconds left===================
17-02-28 20:24:02.067 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:24:02.067 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:24:02.067 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 366.9436 ms
17-02-28 20:24:02.067 -08 000000052 INF: Excitation Filter 1: Moved -107 steps in 367.1002 ms
17-02-28 20:24:02.067 -08 000000052 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.2523 ms
17-02-28 20:24:02.067 -08 000000052 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.3637 ms
17-02-28 20:24:02.067 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 367.0599 ms
17-02-28 20:24:02.067 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 367.4465 ms
17-02-28 20:24:02.068 -08 000000052 INF: ======================================
17-02-28 20:24:02.068 -08 000000078 INF: ======================================
17-02-28 20:24:02.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:02.070 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:02.071 -08 000000102 INF: ===================Serial===================
17-02-28 20:24:02.071 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:02.071 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:02.071 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:24:02.072 -08 000000051 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:24:02.072 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:02.072 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:02.072 -08 000000102 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:24:02.072 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:24:02.072 -08 000000102 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:24:02.073 -08 000000069 INF: ===================Camera TDI, Parallel===================
17-02-28 20:24:02.074 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:24:02.074 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:24:02.075 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.075 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.075 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:24:02.075 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.075 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.133 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:24:02.133 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:02.133 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:02.195 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:24:02.195 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:02.225 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.225 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.225 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.225 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.257 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:24:02.257 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:02.257 -08 000000051 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:24:02.257 -08 000000051 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:24:02.321 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:24:02.321 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:24:02.321 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:02.375 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.375 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.375 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.375 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.383 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:24:02.383 -08 000000051 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:24:02.383 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:02.506 -08 000000051 INF: Y Motor: Unshifted Position: 5935480
17-02-28 20:24:02.525 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.525 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.525 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:02.525 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:02.556 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:02.675 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:24:02.675 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:24:02.675 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:24:02.675 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:24:02.675 -08 000000039 INF: ===================Camera #2 Frame #1===================
17-02-28 20:24:02.675 -08 000000058 INF: ===================Camera #0 Frame #1===================
17-02-28 20:24:02.682 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:02.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:02.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 22 of 40 seconds left===================
17-02-28 20:24:02.818 -08 000000051 INF: Y Motor: Unshifted Position: 5888378
17-02-28 20:24:02.830 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:24:02.830 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:24:02.830 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:24:02.830 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:24:02.830 -08 000000058 INF: ===================Camera #0 Frame #3===================
17-02-28 20:24:02.830 -08 000000039 INF: ===================Camera #2 Frame #3===================
17-02-28 20:24:02.868 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:02.987 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:24:02.987 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:24:02.987 -08 000000058 INF: ===================Camera #0 Frame #4===================
17-02-28 20:24:02.990 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:24:02.990 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:24:02.990 -08 000000039 INF: ===================Camera #2 Frame #4===================
17-02-28 20:24:02.994 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:03.132 -08 000000051 INF: Y Motor: Unshifted Position: 5841523
17-02-28 20:24:03.142 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:03.142 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:03.142 -08 000000058 INF: ===================Camera #0 Frame #5===================
17-02-28 20:24:03.145 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:03.145 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:03.145 -08 000000039 INF: ===================Camera #2 Frame #5===================
17-02-28 20:24:03.182 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:03.192 -08 000000062 INF: FPGA: Recv ZWAIT 
17-02-28 20:24:03.192 -08 000000102 INF: ===================Serial===================
17-02-28 20:24:03.194 -08 000000102 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:24:03.194 -08 000000102 INF: ===================Serial===================
17-02-28 20:24:03.195 -08 000000102 INF: ======================================
17-02-28 20:24:03.253 -08 000000066 INF: FPGA: Recv TDIYWAIT
17-02-28 20:24:03.253 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:03.255 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:24:03.256 -08 000000098 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:24:03.256 -08 000000074 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:24:03.256 -08 000000098 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:24:03.256 -08 000000098 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:24:03.256 -08 000000098 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:24:03.256 -08 000000074 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:24:03.256 -08 000000074 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:24:03.256 -08 000000074 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:24:03.256 -08 000000098 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:24:03.259 -08 000000074 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:24:03.295 -08 000000058 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:24:03.295 -08 000000058 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:24:03.295 -08 000000058 INF: ===================Camera #0 Frame #6===================
17-02-28 20:24:03.298 -08 000000039 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:24:03.298 -08 000000039 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:24:03.298 -08 000000058 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:24:03.298 -08 000000039 INF: ===================Camera #2 Frame #6===================
17-02-28 20:24:03.299 -08 000000058 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:03.301 -08 000000039 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:24:03.302 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:03.305 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:03.322 -08 000000058 INF: Camera #0 ReleaseBuffer
17-02-28 20:24:03.322 -08 000000058 INF: ===================Camera TDI===================
17-02-28 20:24:03.323 -08 000000058 INF: ======================================
17-02-28 20:24:03.347 -08 000000039 INF: Camera #2 ReleaseBuffer
17-02-28 20:24:03.347 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:24:03.348 -08 000000039 INF: ======================================
17-02-28 20:24:03.350 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:24:03.351 -08 000000069 INF: ======================================
17-02-28 20:24:03.443 -08 000000051 INF: Y Motor: Unshifted Position: 5797062
17-02-28 20:24:03.493 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:03.629 -08 000000076 INF: FPGA: Recv EX1MV
17-02-28 20:24:03.629 -08 000000076 INF: FPGA: Recv EX2MV
17-02-28 20:24:03.629 -08 000000074 INF: Excitation Filter 2: Moved 107 steps in 372.5783 ms
17-02-28 20:24:03.629 -08 000000098 INF: Excitation Filter 1: Moved 107 steps in 372.7518 ms
17-02-28 20:24:03.629 -08 000000098 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.8532 ms
17-02-28 20:24:03.629 -08 000000098 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.9277 ms
17-02-28 20:24:03.629 -08 000000074 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.6913 ms
17-02-28 20:24:03.629 -08 000000074 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1152 ms
17-02-28 20:24:03.629 -08 000000098 INF: ======================================
17-02-28 20:24:03.630 -08 000000074 INF: ======================================
17-02-28 20:24:03.631 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:03.632 -08 000000051 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:24:03.632 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:03.632 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:03.632 -08 000000045 INF: ======================================
17-02-28 20:24:03.692 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:24:03.692 -08 000000051 INF: Y Motor: Moved to 62.9704 after 1309 ms
17-02-28 20:24:03.692 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:03.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:03.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 21 of 40 seconds left===================
17-02-28 20:24:03.754 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:24:03.754 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:03.754 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:03.817 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:24:03.817 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:03.817 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:03.881 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:24:03.881 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:24:03.881 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:03.881 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:03.943 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:24:03.943 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:03.943 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:03.943 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:04.005 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:24:04.005 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:04.005 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:04.066 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:24:04.066 -08 000000051 INF: ======================================
17-02-28 20:24:04.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:04.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:04.069 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.069 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:24:04.130 -08 000000074 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:24:04.130 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:04.190 -08 000000033 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:24:04.190 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:24:04.252 -08 000000083 INF: FPGA: Recv ZADCR 2424
17-02-28 20:24:04.252 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:24:04.252 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:24:04.313 -08 000000033 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:24:04.313 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:24:04.313 -08 000000042 INF: TDIScan finished after 6904.0696 ms
17-02-28 20:24:04.313 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:24:04.313 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:24:04.313 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:24:04.381 -08 000000086 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:24:04.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.383 -08 000000023 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:24:04.383 -08 000000059 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:24:04.383 -08 000000082 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:24:04.383 -08 000000059 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:24:04.384 -08 000000059 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:24:04.384 -08 000000023 INF: ======================================
17-02-28 20:24:04.384 -08 000000082 INF: ======================================
17-02-28 20:24:04.442 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:24:04.442 -08 000000059 INF: ======================================
17-02-28 20:24:04.443 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.444 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.445 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:24:04.490 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.491 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:24:04.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:24:04.553 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.553 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:24:04.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:04.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:24:04.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:24:04.587 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:24:04.594 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:24:04.594 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:24:04.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:24:04.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:04.718 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 20 of 40 seconds left===================
17-02-28 20:24:05.280 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:24:05.303 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0884585160587087Best Z position at top surface = -0.159966032092068Best Z position at top surface + compensator offset = -0.137266032092068 C:3,L:5,T
17-02-28 20:24:05.304 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159966032092068
17-02-28 20:24:05.304 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97658
17-02-28 20:24:05.304 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0884585160587087
17-02-28 20:24:05.304 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63263
17-02-28 20:24:05.304 -08 000000042 INF: Z-height at LaneTopSurface is -0.159966032092068.
17-02-28 20:24:05.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:24:05.437 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:24:05.438 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:24:05.500 -08 000000099 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:05.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Focus Point 1===================
17-02-28 20:24:05.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.502 -08 000000042 INF: Lane 5, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:24:05.502 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.503 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.503 -08 000000023 INF: ===================Move Tilt Motor 2===================
17-02-28 20:24:05.503 -08 000000108 INF: ===================Move Tilt Motor 1===================
17-02-28 20:24:05.504 -08 000000052 INF: ===================Move Tilt Motor 3===================
17-02-28 20:24:05.504 -08 000000023 INF: ======================================
17-02-28 20:24:05.504 -08 000000052 INF: ======================================
17-02-28 20:24:05.504 -08 000000108 INF: ======================================
17-02-28 20:24:05.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.506 -08 000000042 INF: ETF Best Z: -0.137266 mm (35983 DAC)
17-02-28 20:24:05.507 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.507 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.508 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:24:05.508 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:24:05.895 -08 000000073 INF: FPGA: Recv MIOCOMPF
17-02-28 20:24:05.895 -08 000000042 INF: Compensator: Moved IntoPath in 388 ms
17-02-28 20:24:05.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.896 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:05.896 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 19 of 40 seconds left===================
17-02-28 20:24:05.897 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:05.903 -08 000000042 INF: Swath 1 position calculated to be: {X=79.69164, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:24:05.903 -08 000000042 INF: Swath 2 position calculated to be: {X=80.79964, Y=39.76308} from estimated center X= 80.20699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:24:05.908 -08 000000042 INF: Swath 0: Converted transform from (-28.36473, 9.72634) pixels to (-0.00966, 0.00345) mm.
17-02-28 20:24:05.914 -08 000000042 INF: Swath 1: Converted transform from (-50.26249, 6.351236) pixels to (-0.01725, 0.00207) mm.
17-02-28 20:24:05.914 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:24:05.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:24:05.915 -08 000000042 INF: Transformed XStagePosition from 79.69164 mm to 79.6819751318544 mm.
17-02-28 20:24:05.926 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5565393554289 mm.
17-02-28 20:24:05.926 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3565393554289 mm.
17-02-28 20:24:05.926 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4472893554289 mm.
17-02-28 20:24:05.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:05.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:24:05.929 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:05.929 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:24:05.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:05.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:05.936 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:24:05.937 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:24:05.937 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:05.937 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:05.937 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:05.937 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:05.937 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:24:05.937 -08 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:05.938 -08 000000051 INF: ===================Move X,Y, Parallel===================
17-02-28 20:24:05.938 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:05.938 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:05.938 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:05.938 -08 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:05.939 -08 000000085 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:24:05.939 -08 000000085 INF: Z Motor: Moving to -0.1573 mm, started at -0.0100 mm
17-02-28 20:24:05.939 -08 000000108 INF: ===================Move X Motor without settling===================
17-02-28 20:24:05.939 -08 000000082 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:05.939 -08 000000085 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:24:05.939 -08 000000108 INF: X Motor: Xmit PR VM\n
17-02-28 20:24:05.939 -08 000000033 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:24:05.939 -08 000000060 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:24:05.939 -08 000000102 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:24:05.939 -08 000000091 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:24:05.939 -08 000000100 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:24:05.939 -08 000000078 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:24:05.939 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:24:05.939 -08 000000033 INF: ======================================
17-02-28 20:24:05.939 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:24:05.940 -08 000000091 INF: ======================================
17-02-28 20:24:05.940 -08 000000082 INF: Y Motor: Moving to 64.5565 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:24:05.940 -08 000000082 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:05.940 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:05.940 -08 000000102 INF: ======================================
17-02-28 20:24:05.940 -08 000000060 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:24:05.941 -08 000000100 INF: ======================================
17-02-28 20:24:05.941 -08 000000077 INF: ======================================
17-02-28 20:24:05.941 -08 000000060 INF: ======================================
17-02-28 20:24:05.941 -08 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:05.942 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:05.942 -08 000000078 INF: ======================================
17-02-28 20:24:05.943 -08 000000105 INF: ======================================
17-02-28 20:24:05.943 -08 000000090 INF: ======================================
17-02-28 20:24:05.943 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:05.943 -08 000000099 INF: ======================================
17-02-28 20:24:05.944 -08 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:05.944 -08 000000076 INF: ======================================
17-02-28 20:24:05.945 -08 000000023 INF: ======================================
17-02-28 20:24:05.945 -08 000000066 INF: ======================================
17-02-28 20:24:06.017 -08 000000072 INF: FPGA: Recv ZTRG 
17-02-28 20:24:06.017 -08 000000085 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:24:06.018 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:24:06.018 -08 000000082 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:06.018 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:06.020 -08 000000108 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:24:06.020 -08 000000108 INF: X Motor: Xmit PR VI\n
17-02-28 20:24:06.078 -08 000000083 INF: FPGA: Recv ZYT 
17-02-28 20:24:06.078 -08 000000085 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:24:06.078 -08 000000085 INF: FPGA: Xmit ZMV 41226\n
17-02-28 20:24:06.080 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:24:06.080 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:06.082 -08 000000108 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:24:06.082 -08 000000108 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:24:06.082 -08 000000108 INF: X Motor: Moving to 79.6820 mm @15.000 mm/sec, started at 80.2451 mm
17-02-28 20:24:06.082 -08 000000108 INF: X Motor: Xmit MA 8471\n
17-02-28 20:24:06.140 -08 000000098 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:24:06.140 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:24:06.142 -08 000000108 INF: X Motor: Recv MA 8471\r\n>
17-02-28 20:24:06.142 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:24:06.142 -08 000000082 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:06.142 -08 000000108 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:24:06.142 -08 000000082 INF: Y Motor: Set target position to 5955654 encoder counts
17-02-28 20:24:06.142 -08 000000082 INF: Y Motor: Xmit s r0xca 5955654\r
17-02-28 20:24:06.204 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:24:06.204 -08 000000082 INF: Y Motor: Start the move command
17-02-28 20:24:06.204 -08 000000082 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:06.264 -08 000000098 INF: FPGA: Recv ZMV 
17-02-28 20:24:06.264 -08 000000085 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.7948 ms
17-02-28 20:24:06.264 -08 000000085 INF: FPGA: Xmit ZDACR\n
17-02-28 20:24:06.266 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:24:06.266 -08 000000082 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:24:06.266 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:06.327 -08 000000102 INF: FPGA: Recv ZDACR 41226
17-02-28 20:24:06.327 -08 000000085 INF: Z Motor: MoveAndTrigger took 387.3767 ms w/comms
17-02-28 20:24:06.327 -08 000000085 INF: Z Motor: After move to -0.1573, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:24:06.327 -08 000000085 INF: Z Motor: MoveAbsStepped took 387.617 ms
17-02-28 20:24:06.328 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:06.329 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:24:06.330 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:24:06.330 -08 000000069 INF: ===================Camera Arm TDI===================
17-02-28 20:24:06.330 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:06.331 -08 000000069 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:06.331 -08 000000052 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:06.331 -08 000000069 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:06.332 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:06.332 -08 000000052 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:24:06.389 -08 000000072 INF: FPGA: Recv ZSEL 
17-02-28 20:24:06.390 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:06.390 -08 000000052 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:24:06.391 -08 000000082 INF: Y Motor: Unshifted Position: 5878094
17-02-28 20:24:06.441 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:06.454 -08 000000102 INF: FPGA: Recv TDIBB
17-02-28 20:24:06.454 -08 000000052 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:06.455 -08 000000052 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:06.456 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:06.457 -08 000000052 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:24:06.458 -08 000000052 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:24:06.458 -08 000000052 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:24:06.516 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:06.516 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:06.518 -08 000000052 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:24:06.518 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:06.520 -08 000000052 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:24:06.520 -08 000000052 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:24:06.520 -08 000000052 INF: Z Motor: Arming to move to -0.1173 mm
17-02-28 20:24:06.520 -08 000000052 INF: FPGA: Xmit ZYT 6435654 4\n
17-02-28 20:24:06.568 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:06.578 -08 000000102 INF: FPGA: Recv ZYT 
17-02-28 20:24:06.578 -08 000000052 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378094 enc / 63.781 mm / ) = 6435654 enc / 64.357 mm
17-02-28 20:24:06.578 -08 000000052 INF: FPGA: Xmit ZARM 30740\n
17-02-28 20:24:06.580 -08 000000108 INF: X Motor: Xmit PR ER\n
17-02-28 20:24:06.640 -08 000000060 INF: FPGA: Recv ZARM
17-02-28 20:24:06.640 -08 000000052 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0617 ms
17-02-28 20:24:06.640 -08 000000052 INF: Z Motor: ArmAbsStepped took 120.1705 ms
17-02-28 20:24:06.641 -08 000000052 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:06.642 -08 000000108 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:24:06.642 -08 000000108 INF: X Motor: Moved to 79.6812 after 498 ms
17-02-28 20:24:06.642 -08 000000108 INF: ======================================
17-02-28 20:24:06.642 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:24:06.644 -08 000000052 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:24:06.644 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:24:06.646 -08 000000052 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:24:06.646 -08 000000052 INF: ===================TDI Scan Setup===================
17-02-28 20:24:06.647 -08 000000052 INF: ======================================
17-02-28 20:24:06.704 -08 000000082 INF: Y Motor: Unshifted Position: 5955654
17-02-28 20:24:06.704 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:06.704 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:06.766 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:24:06.766 -08 000000082 INF: Y Motor: Moved to 64.5565 after 498 ms
17-02-28 20:24:06.766 -08 000000082 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:06.828 -08 000000082 INF: Y Motor: Recv v 4096\r
17-02-28 20:24:06.828 -08 000000082 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:06.828 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:06.890 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:24:06.890 -08 000000082 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:06.890 -08 000000082 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:06.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:06.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 18 of 40 seconds left===================
17-02-28 20:24:06.957 -08 000000082 INF: Y Motor: Recv v 402653184\r
17-02-28 20:24:06.957 -08 000000082 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:24:06.957 -08 000000082 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:06.957 -08 000000082 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:07.017 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:24:07.017 -08 000000082 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:07.017 -08 000000082 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:07.017 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:07.079 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:24:07.079 -08 000000082 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:07.079 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:07.141 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:24:07.141 -08 000000082 INF: ======================================
17-02-28 20:24:07.142 -08 000000051 INF: ===================Move X,Y===================
17-02-28 20:24:07.143 -08 000000051 INF: ======================================
17-02-28 20:24:07.277 -08 000000069 INF: Camera #0 AttachBuffer (imageDataPtr = 56915988528 imgPtr = 56915988528 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:07.277 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:07.277 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:07.292 -08 000000069 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:07.294 -08 000000069 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:07.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:07.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 17 of 40 seconds left===================
17-02-28 20:24:08.338 -08 000000069 INF: Camera #2 AttachBuffer (imageDataPtr = 58727927856 imgPtr = 59633897520 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:08.338 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:08.338 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:08.353 -08 000000069 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:08.355 -08 000000069 INF: ===================Camera Arm TDI===================
17-02-28 20:24:08.356 -08 000000069 INF: ======================================
17-02-28 20:24:08.357 -08 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:08.358 -08 000000085 INF: ======================================
17-02-28 20:24:08.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:08.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:08.360 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:24:08.360 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:24:08.452 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:08.452 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:24:08.513 -08 000000102 INF: FPGA: Recv ZFREQCL
17-02-28 20:24:08.513 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:24:08.513 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:08.513 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:08.575 -08 000000076 INF: FPGA: Recv TDIYERD 6455655
17-02-28 20:24:08.575 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455655 counts (64.557 mm)
17-02-28 20:24:08.575 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:08.576 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:08.576 -08 000000023 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:08.576 -08 000000066 INF: ===================Set YMotor gains for scans===================
17-02-28 20:24:08.577 -08 000000066 INF: ======================================
17-02-28 20:24:08.577 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:08.578 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:24:08.578 -08 000000023 INF: FPGA: Xmit TDIYPOS 6344729\n
17-02-28 20:24:08.637 -08 000000091 INF: FPGA: Recv TDIYPOS
17-02-28 20:24:08.637 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:08.639 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:24:08.639 -08 000000023 INF: FPGA: Xmit TDIYARM3 139264 6435654 1 1\n
17-02-28 20:24:08.699 -08 000000052 INF: FPGA: Recv TDIYARM3
17-02-28 20:24:08.699 -08 000000023 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:08.700 -08 000000023 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:08.701 -08 000000023 INF: ======================================
17-02-28 20:24:08.702 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:08.703 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:08.703 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:08.704 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:08.704 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:08.705 -08 000000037 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:24:08.705 -08 000000045 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:24:08.705 -08 000000037 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:24:08.705 -08 000000037 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:24:08.705 -08 000000037 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:24:08.705 -08 000000045 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:24:08.705 -08 000000037 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:24:08.705 -08 000000045 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:24:08.705 -08 000000045 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:24:08.706 -08 000000045 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:24:08.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:08.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 16 of 40 seconds left===================
17-02-28 20:24:09.074 -08 000000023 INF: FPGA: Recv EX2MV
17-02-28 20:24:09.074 -08 000000023 INF: FPGA: Recv EX1MV
17-02-28 20:24:09.074 -08 000000045 INF: Excitation Filter 1: Moved -107 steps in 368.8322 ms
17-02-28 20:24:09.074 -08 000000037 INF: Excitation Filter 2: Moved -107 steps in 369.0173 ms
17-02-28 20:24:09.074 -08 000000045 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.9824 ms
17-02-28 20:24:09.074 -08 000000045 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.09 ms
17-02-28 20:24:09.074 -08 000000037 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.1216 ms
17-02-28 20:24:09.074 -08 000000037 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2933 ms
17-02-28 20:24:09.075 -08 000000045 INF: ======================================
17-02-28 20:24:09.075 -08 000000037 INF: ======================================
17-02-28 20:24:09.076 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:09.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:09.078 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:24:09.078 -08 000000078 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:09.078 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:24:09.078 -08 000000090 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:09.078 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:24:09.078 -08 000000090 INF: Y Motor: Moving to 14.9082 mm @6.500 mm/sec, started at 64.5565 mm
17-02-28 20:24:09.078 -08 000000090 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:09.078 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:09.078 -08 000000089 INF: ===================Camera TDI, Parallel===================
17-02-28 20:24:09.078 -08 000000078 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:24:09.079 -08 000000078 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:24:09.079 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:24:09.079 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:24:09.081 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:09.081 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:09.081 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:09.081 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:09.139 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:24:09.139 -08 000000090 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:09.139 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:09.200 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:24:09.200 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:09.231 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:09.231 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:09.232 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:09.232 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:09.262 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:24:09.262 -08 000000090 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:09.262 -08 000000090 INF: Y Motor: Set target position to 990820 encoder counts
17-02-28 20:24:09.262 -08 000000090 INF: Y Motor: Xmit s r0xca 990820\r
17-02-28 20:24:09.326 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:24:09.326 -08 000000090 INF: Y Motor: Start the move command
17-02-28 20:24:09.326 -08 000000090 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:09.381 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:09.381 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:09.382 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:09.382 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:09.386 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:24:09.386 -08 000000090 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:24:09.386 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:09.449 -08 000000077 INF: FPGA: Recv ZWAIT 
17-02-28 20:24:09.449 -08 000000051 INF: ======================================
17-02-28 20:24:09.513 -08 000000090 INF: Y Motor: Unshifted Position: 5893152
17-02-28 20:24:09.531 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:09.531 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:09.531 -08 000000091 INF: ===================Camera #0 Frame #5===================
17-02-28 20:24:09.532 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:09.532 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:09.533 -08 000000083 INF: ===================Camera #2 Frame #5===================
17-02-28 20:24:09.563 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:09.687 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:09.696 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:09.696 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:09.696 -08 000000091 INF: ===================Camera #0 Frame #11===================
17-02-28 20:24:09.699 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:09.699 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:09.699 -08 000000083 INF: ===================Camera #2 Frame #11===================
17-02-28 20:24:09.823 -08 000000090 INF: Y Motor: Unshifted Position: 5691435
17-02-28 20:24:09.864 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:09.864 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:09.864 -08 000000091 INF: ===================Camera #0 Frame #17===================
17-02-28 20:24:09.868 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:09.868 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:09.868 -08 000000083 INF: ===================Camera #2 Frame #17===================
17-02-28 20:24:09.873 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:09.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:09.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 15 of 40 seconds left===================
17-02-28 20:24:09.998 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:10.032 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:24:10.032 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:24:10.032 -08 000000091 INF: ===================Camera #0 Frame #23===================
17-02-28 20:24:10.037 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:24:10.037 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:24:10.037 -08 000000083 INF: ===================Camera #2 Frame #23===================
17-02-28 20:24:10.139 -08 000000090 INF: Y Motor: Unshifted Position: 5487127
17-02-28 20:24:10.189 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:10.201 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:24:10.201 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:24:10.201 -08 000000091 INF: ===================Camera #0 Frame #29===================
17-02-28 20:24:10.207 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:24:10.207 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:24:10.207 -08 000000083 INF: ===================Camera #2 Frame #29===================
17-02-28 20:24:10.311 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:10.371 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:24:10.371 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:24:10.371 -08 000000091 INF: ===================Camera #0 Frame #35===================
17-02-28 20:24:10.377 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:24:10.377 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:24:10.377 -08 000000083 INF: ===================Camera #2 Frame #36===================
17-02-28 20:24:10.447 -08 000000090 INF: Y Motor: Unshifted Position: 5284322
17-02-28 20:24:10.497 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:10.540 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:24:10.540 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:24:10.540 -08 000000091 INF: ===================Camera #0 Frame #42===================
17-02-28 20:24:10.550 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:24:10.550 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:24:10.550 -08 000000083 INF: ===================Camera #2 Frame #42===================
17-02-28 20:24:10.624 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:10.713 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:24:10.713 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:24:10.713 -08 000000091 INF: ===================Camera #0 Frame #48===================
17-02-28 20:24:10.720 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:24:10.720 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:24:10.720 -08 000000083 INF: ===================Camera #2 Frame #48===================
17-02-28 20:24:10.760 -08 000000090 INF: Y Motor: Unshifted Position: 5081948
17-02-28 20:24:10.810 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:10.881 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:24:10.881 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:24:10.881 -08 000000091 INF: ===================Camera #0 Frame #54===================
17-02-28 20:24:10.889 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:24:10.889 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:24:10.889 -08 000000083 INF: ===================Camera #2 Frame #55===================
17-02-28 20:24:10.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:10.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 14 of 40 seconds left===================
17-02-28 20:24:10.934 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.050 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:24:11.050 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:24:11.050 -08 000000091 INF: ===================Camera #0 Frame #60===================
17-02-28 20:24:11.062 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:24:11.062 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:24:11.062 -08 000000083 INF: ===================Camera #2 Frame #61===================
17-02-28 20:24:11.073 -08 000000090 INF: Y Motor: Unshifted Position: 4878502
17-02-28 20:24:11.123 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.220 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:24:11.220 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:24:11.220 -08 000000091 INF: ===================Camera #0 Frame #67===================
17-02-28 20:24:11.232 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:24:11.232 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:24:11.232 -08 000000083 INF: ===================Camera #2 Frame #67===================
17-02-28 20:24:11.247 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.385 -08 000000090 INF: Y Motor: Unshifted Position: 4677001
17-02-28 20:24:11.393 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:24:11.393 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:24:11.393 -08 000000091 INF: ===================Camera #0 Frame #73===================
17-02-28 20:24:11.403 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:24:11.403 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:24:11.403 -08 000000083 INF: ===================Camera #2 Frame #73===================
17-02-28 20:24:11.435 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.560 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.563 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:24:11.563 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:24:11.563 -08 000000091 INF: ===================Camera #0 Frame #79===================
17-02-28 20:24:11.573 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:24:11.573 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:24:11.573 -08 000000083 INF: ===================Camera #2 Frame #80===================
17-02-28 20:24:11.696 -08 000000090 INF: Y Motor: Unshifted Position: 4473327
17-02-28 20:24:11.733 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:24:11.733 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:24:11.733 -08 000000091 INF: ===================Camera #0 Frame #86===================
17-02-28 20:24:11.746 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.747 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:24:11.747 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:24:11.747 -08 000000083 INF: ===================Camera #2 Frame #86===================
17-02-28 20:24:11.870 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:11.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:11.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 13 of 40 seconds left===================
17-02-28 20:24:11.906 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:24:11.906 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:24:11.906 -08 000000091 INF: ===================Camera #0 Frame #92===================
17-02-28 20:24:11.917 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:24:11.917 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:24:11.917 -08 000000083 INF: ===================Camera #2 Frame #92===================
17-02-28 20:24:12.007 -08 000000090 INF: Y Motor: Unshifted Position: 4269875
17-02-28 20:24:12.057 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:12.075 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:24:12.075 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:24:12.075 -08 000000091 INF: ===================Camera #0 Frame #98===================
17-02-28 20:24:12.088 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:24:12.088 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:24:12.088 -08 000000083 INF: ===================Camera #2 Frame #99===================
17-02-28 20:24:12.184 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:12.245 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:24:12.245 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:24:12.245 -08 000000091 INF: ===================Camera #0 Frame #104===================
17-02-28 20:24:12.262 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:24:12.262 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:24:12.262 -08 000000083 INF: ===================Camera #2 Frame #105===================
17-02-28 20:24:12.320 -08 000000090 INF: Y Motor: Unshifted Position: 4067500
17-02-28 20:24:12.370 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:12.415 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:24:12.415 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:24:12.415 -08 000000091 INF: ===================Camera #0 Frame #111===================
17-02-28 20:24:12.433 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:24:12.433 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:24:12.433 -08 000000083 INF: ===================Camera #2 Frame #111===================
17-02-28 20:24:12.494 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:12.588 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:24:12.588 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:24:12.588 -08 000000091 INF: ===================Camera #0 Frame #117===================
17-02-28 20:24:12.604 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:24:12.604 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:24:12.604 -08 000000083 INF: ===================Camera #2 Frame #118===================
17-02-28 20:24:12.634 -08 000000090 INF: Y Motor: Unshifted Position: 3866003
17-02-28 20:24:12.684 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:12.758 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:24:12.758 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:24:12.758 -08 000000091 INF: ===================Camera #0 Frame #123===================
17-02-28 20:24:12.778 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:24:12.778 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:24:12.778 -08 000000083 INF: ===================Camera #2 Frame #124===================
17-02-28 20:24:12.808 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:12.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:12.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 12 of 40 seconds left===================
17-02-28 20:24:12.928 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:24:12.928 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:24:12.928 -08 000000091 INF: ===================Camera #0 Frame #130===================
17-02-28 20:24:12.944 -08 000000090 INF: Y Motor: Unshifted Position: 3661683
17-02-28 20:24:12.949 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:24:12.949 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:24:12.949 -08 000000083 INF: ===================Camera #2 Frame #130===================
17-02-28 20:24:12.994 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.100 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:24:13.100 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:24:13.100 -08 000000091 INF: ===================Camera #0 Frame #136===================
17-02-28 20:24:13.118 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.120 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:24:13.120 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:24:13.120 -08 000000083 INF: ===================Camera #2 Frame #137===================
17-02-28 20:24:13.258 -08 000000090 INF: Y Motor: Unshifted Position: 3460196
17-02-28 20:24:13.270 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:24:13.270 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:24:13.270 -08 000000091 INF: ===================Camera #0 Frame #142===================
17-02-28 20:24:13.294 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:24:13.294 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:24:13.294 -08 000000083 INF: ===================Camera #2 Frame #143===================
17-02-28 20:24:13.308 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.432 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.440 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:24:13.440 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:24:13.440 -08 000000091 INF: ===================Camera #0 Frame #148===================
17-02-28 20:24:13.465 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:24:13.465 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:24:13.465 -08 000000083 INF: ===================Camera #2 Frame #149===================
17-02-28 20:24:13.568 -08 000000090 INF: Y Motor: Unshifted Position: 3255873
17-02-28 20:24:13.608 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:24:13.608 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:24:13.608 -08 000000091 INF: ===================Camera #0 Frame #155===================
17-02-28 20:24:13.618 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.634 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:24:13.634 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:24:13.634 -08 000000083 INF: ===================Camera #2 Frame #156===================
17-02-28 20:24:13.742 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.781 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:24:13.781 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:24:13.781 -08 000000091 INF: ===================Camera #0 Frame #161===================
17-02-28 20:24:13.808 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:24:13.808 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:24:13.808 -08 000000083 INF: ===================Camera #2 Frame #162===================
17-02-28 20:24:13.882 -08 000000090 INF: Y Motor: Unshifted Position: 3054166
17-02-28 20:24:13.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:13.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 11 of 40 seconds left===================
17-02-28 20:24:13.932 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:13.950 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:24:13.950 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:24:13.950 -08 000000091 INF: ===================Camera #0 Frame #167===================
17-02-28 20:24:13.979 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:24:13.979 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:24:13.979 -08 000000083 INF: ===================Camera #2 Frame #168===================
17-02-28 20:24:14.054 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:14.120 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:24:14.120 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:24:14.120 -08 000000091 INF: ===================Camera #0 Frame #173===================
17-02-28 20:24:14.150 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:24:14.150 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:24:14.150 -08 000000083 INF: ===================Camera #2 Frame #175===================
17-02-28 20:24:14.194 -08 000000090 INF: Y Motor: Unshifted Position: 2851368
17-02-28 20:24:14.244 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:14.290 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:24:14.290 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:24:14.290 -08 000000091 INF: ===================Camera #0 Frame #180===================
17-02-28 20:24:14.324 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:24:14.324 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:24:14.324 -08 000000083 INF: ===================Camera #2 Frame #181===================
17-02-28 20:24:14.368 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:14.463 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:24:14.463 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:24:14.463 -08 000000091 INF: ===================Camera #0 Frame #186===================
17-02-28 20:24:14.495 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:24:14.495 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:24:14.495 -08 000000083 INF: ===================Camera #2 Frame #187===================
17-02-28 20:24:14.504 -08 000000090 INF: Y Motor: Unshifted Position: 2646405
17-02-28 20:24:14.554 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:14.632 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:24:14.632 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:24:14.632 -08 000000091 INF: ===================Camera #0 Frame #192===================
17-02-28 20:24:14.665 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:24:14.665 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:24:14.665 -08 000000083 INF: ===================Camera #2 Frame #194===================
17-02-28 20:24:14.678 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:14.802 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:24:14.802 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:24:14.802 -08 000000091 INF: ===================Camera #0 Frame #199===================
17-02-28 20:24:14.818 -08 000000090 INF: Y Motor: Unshifted Position: 2445339
17-02-28 20:24:14.839 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:24:14.839 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:24:14.839 -08 000000083 INF: ===================Camera #2 Frame #200===================
17-02-28 20:24:14.868 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:14.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:14.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 10 of 40 seconds left===================
17-02-28 20:24:14.974 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:24:14.974 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:24:14.974 -08 000000091 INF: ===================Camera #0 Frame #205===================
17-02-28 20:24:14.992 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.010 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:24:15.010 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:24:15.010 -08 000000083 INF: ===================Camera #2 Frame #206===================
17-02-28 20:24:15.130 -08 000000090 INF: Y Motor: Unshifted Position: 2241889
17-02-28 20:24:15.144 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:24:15.144 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:24:15.144 -08 000000091 INF: ===================Camera #0 Frame #211===================
17-02-28 20:24:15.180 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.180 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:24:15.180 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:24:15.180 -08 000000083 INF: ===================Camera #2 Frame #213===================
17-02-28 20:24:15.304 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.314 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:24:15.314 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:24:15.314 -08 000000091 INF: ===================Camera #0 Frame #217===================
17-02-28 20:24:15.354 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:24:15.354 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:24:15.354 -08 000000083 INF: ===================Camera #2 Frame #219===================
17-02-28 20:24:15.440 -08 000000090 INF: Y Motor: Unshifted Position: 2038437
17-02-28 20:24:15.484 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:24:15.484 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:24:15.484 -08 000000091 INF: ===================Camera #0 Frame #224===================
17-02-28 20:24:15.490 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.525 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:24:15.525 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:24:15.525 -08 000000083 INF: ===================Camera #2 Frame #225===================
17-02-28 20:24:15.614 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.657 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:24:15.657 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:24:15.657 -08 000000091 INF: ===================Camera #0 Frame #230===================
17-02-28 20:24:15.696 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:24:15.696 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:24:15.696 -08 000000083 INF: ===================Camera #2 Frame #232===================
17-02-28 20:24:15.754 -08 000000090 INF: Y Motor: Unshifted Position: 1836719
17-02-28 20:24:15.804 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.827 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:24:15.827 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:24:15.827 -08 000000091 INF: ===================Camera #0 Frame #236===================
17-02-28 20:24:15.870 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:24:15.870 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:24:15.870 -08 000000083 INF: ===================Camera #2 Frame #238===================
17-02-28 20:24:15.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:15.897 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 9 of 40 seconds left===================
17-02-28 20:24:15.928 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:15.996 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:24:15.996 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:24:15.996 -08 000000091 INF: ===================Camera #0 Frame #243===================
17-02-28 20:24:16.041 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:24:16.041 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:24:16.041 -08 000000083 INF: ===================Camera #2 Frame #244===================
17-02-28 20:24:16.066 -08 000000090 INF: Y Motor: Unshifted Position: 1632613
17-02-28 20:24:16.116 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:16.169 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:24:16.169 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:24:16.169 -08 000000091 INF: ===================Camera #0 Frame #249===================
17-02-28 20:24:16.212 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:24:16.212 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:24:16.212 -08 000000083 INF: ===================Camera #2 Frame #251===================
17-02-28 20:24:16.237 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:16.340 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:24:16.340 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:24:16.340 -08 000000091 INF: ===================Camera #0 Frame #255===================
17-02-28 20:24:16.377 -08 000000090 INF: Y Motor: Unshifted Position: 1428945
17-02-28 20:24:16.387 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:24:16.387 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:24:16.387 -08 000000083 INF: ===================Camera #2 Frame #257===================
17-02-28 20:24:16.427 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:16.510 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:24:16.510 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:24:16.510 -08 000000091 INF: ===================Camera #0 Frame #261===================
17-02-28 20:24:16.551 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:16.558 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:24:16.558 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:24:16.558 -08 000000083 INF: ===================Camera #2 Frame #263===================
17-02-28 20:24:16.680 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:24:16.680 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:24:16.680 -08 000000091 INF: ===================Camera #0 Frame #268===================
17-02-28 20:24:16.691 -08 000000090 INF: Y Motor: Unshifted Position: 1227868
17-02-28 20:24:16.728 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:24:16.728 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:24:16.728 -08 000000083 INF: ===================Camera #2 Frame #269===================
17-02-28 20:24:16.741 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:16.810 -08 000000098 INF: FPGA: Recv TDIYWAIT
17-02-28 20:24:16.810 -08 000000078 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:16.812 -08 000000078 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:24:16.813 -08 000000085 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:24:16.813 -08 000000086 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:24:16.813 -08 000000085 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:24:16.813 -08 000000085 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:24:16.813 -08 000000085 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:24:16.813 -08 000000085 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:24:16.813 -08 000000086 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:24:16.813 -08 000000086 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:24:16.813 -08 000000086 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:24:16.816 -08 000000086 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:24:16.852 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:24:16.852 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:24:16.852 -08 000000091 INF: ===================Camera #0 Frame #272===================
17-02-28 20:24:16.862 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:16.865 -08 000000091 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:24:16.866 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:16.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:16.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 8 of 40 seconds left===================
17-02-28 20:24:17.001 -08 000000090 INF: Y Motor: Unshifted Position: 1023775
17-02-28 20:24:17.026 -08 000000091 INF: Camera #0 ReleaseBuffer
17-02-28 20:24:17.026 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:24:17.026 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:24:17.026 -08 000000083 INF: ===================Camera #2 Frame #272===================
17-02-28 20:24:17.026 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:24:17.036 -08 000000083 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:24:17.037 -08 000000083 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:17.051 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:17.059 -08 000000091 INF: ======================================
17-02-28 20:24:17.186 -08 000000087 INF: FPGA: Recv EX1MV
17-02-28 20:24:17.186 -08 000000087 INF: FPGA: Recv EX2MV
17-02-28 20:24:17.186 -08 000000086 INF: Excitation Filter 2: Moved 107 steps in 372.4947 ms
17-02-28 20:24:17.186 -08 000000085 INF: Excitation Filter 1: Moved 107 steps in 372.7441 ms
17-02-28 20:24:17.186 -08 000000085 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.8559 ms
17-02-28 20:24:17.186 -08 000000085 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.9407 ms
17-02-28 20:24:17.186 -08 000000086 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.6126 ms
17-02-28 20:24:17.186 -08 000000086 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.054 ms
17-02-28 20:24:17.186 -08 000000085 INF: ======================================
17-02-28 20:24:17.187 -08 000000086 INF: ======================================
17-02-28 20:24:17.188 -08 000000090 INF: Y Motor: Unshifted Position: 990819
17-02-28 20:24:17.188 -08 000000090 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:17.188 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:17.188 -08 000000078 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:17.189 -08 000000078 INF: ======================================
17-02-28 20:24:17.232 -08 000000083 INF: Camera #2 ReleaseBuffer
17-02-28 20:24:17.232 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:24:17.250 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:24:17.250 -08 000000090 INF: Y Motor: Moved to 14.9082 after 7863 ms
17-02-28 20:24:17.250 -08 000000090 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:17.266 -08 000000083 INF: ======================================
17-02-28 20:24:17.268 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:24:17.269 -08 000000089 INF: ======================================
17-02-28 20:24:17.312 -08 000000090 INF: Y Motor: Recv v 4097\r
17-02-28 20:24:17.312 -08 000000090 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:17.312 -08 000000090 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:17.374 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:24:17.374 -08 000000090 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:17.374 -08 000000090 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:17.436 -08 000000090 INF: Y Motor: Recv v 134217728\r
17-02-28 20:24:17.436 -08 000000090 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:24:17.436 -08 000000090 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:17.436 -08 000000090 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:17.501 -08 000000090 INF: Y Motor: Recv v 0\r
17-02-28 20:24:17.501 -08 000000090 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:17.501 -08 000000090 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:17.501 -08 000000090 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:17.563 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:24:17.563 -08 000000090 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:17.563 -08 000000090 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:17.626 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:24:17.626 -08 000000090 INF: ======================================
17-02-28 20:24:17.627 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:17.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:17.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:17.629 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:24:17.686 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:24:17.686 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:17.748 -08 000000108 INF: FPGA: Recv TDIYERD 1490821
17-02-28 20:24:17.748 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:24:17.810 -08 000000086 INF: FPGA: Recv ZADCR 35933
17-02-28 20:24:17.810 -08 000000042 INF: At scan end Y pos = 14.908 and Z pos = -0.137. Y moved -48.539 mm
17-02-28 20:24:17.810 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:24:17.872 -08 000000090 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:24:17.872 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:24:17.872 -08 000000042 INF: TDIScan finished after 11955.597 ms
17-02-28 20:24:17.872 -08 000000042 INF: Image[0]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:24:17.872 -08 000000042 INF: Image[2]: Y should trigger at 63.447 mm, 2nd row was at 64.356 mm (error = 0.909 mm)
17-02-28 20:24:17.874 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:17.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:17.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 7 of 40 seconds left===================
17-02-28 20:24:17.905 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.574 um
17-02-28 20:24:17.906 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:17.906 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:24:17.934 -08 000000099 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:24:17.934 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:17.935 -08 000000052 INF: ===================Dither Clean Up Command===================
17-02-28 20:24:17.935 -08 000000105 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:24:17.935 -08 000000023 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:24:17.935 -08 000000109 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:24:17.935 -08 000000023 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:24:17.935 -08 000000023 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:24:17.936 -08 000000109 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:24:17.936 -08 000000109 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:24:17.936 -08 000000105 INF: ======================================
17-02-28 20:24:17.936 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:24:17.936 -08 000000060 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:17.937 -08 000000045 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:24:17.939 -08 000000060 INF: ===================LFT:Extracting coords===================
17-02-28 20:24:17.964 -08 000000060 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:17.965 -08 000000060 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:24:17.966 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:24:17.966 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:24:17.966 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:24:17.966 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:24:17.966 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:17.966 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:17.966 -08 000000035 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:17.967 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:17.997 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:17.997 -08 000000073 INF: FPGA: Recv ZSEL 
17-02-28 20:24:17.997 -08 000000045 INF: FPGA: Xmit ZDACW 41226\n
17-02-28 20:24:17.997 -08 000000109 INF: ======================================
17-02-28 20:24:17.998 -08 000000023 INF: Y Motor: Recv ok\r
17-02-28 20:24:17.998 -08 000000023 INF: ======================================
17-02-28 20:24:18.040 -08 000000108 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:18.041 -08 000000050 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:18.041 -08 000000035 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:18.041 -08 000000033 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:18.059 -08 000000100 INF: FPGA: Recv ZDACW 
17-02-28 20:24:18.059 -08 000000045 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:24:18.060 -08 000000045 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:24:18.121 -08 000000082 INF: FPGA: Recv TDIBB
17-02-28 20:24:18.121 -08 000000045 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:24:18.122 -08 000000045 INF: ======================================
17-02-28 20:24:18.192 -08 000000108 INF: LFT found best fwhm score 2.000067 in 151 ms
17-02-28 20:24:18.192 -08 000000035 INF: LFT found best fwhm score 2.12746 in 151 ms
17-02-28 20:24:18.192 -08 000000035 INF: LFT found good score at index 2453 with fwhm value 2.12746. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:5,T
17-02-28 20:24:18.192 -08 000000050 INF: LFT found best fwhm score 2.000913 in 151 ms
17-02-28 20:24:18.192 -08 000000050 INF: LFT found good score at index 5821 with fwhm value 2.000913. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:5,T
17-02-28 20:24:18.192 -08 000000108 INF: LFT found good score at index 3649 with fwhm value 2.000067. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:5,T
17-02-28 20:24:18.192 -08 000000035 INF: ===================LookupFocusTracking===================
17-02-28 20:24:18.192 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:24:18.192 -08 000000033 INF: LFT found best fwhm score 2.000066 in 151 ms
17-02-28 20:24:18.192 -08 000000033 INF: LFT found good score at index 3265 with fwhm value 2.000066. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:5,T
17-02-28 20:24:18.193 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:24:18.193 -08 000000035 INF: ======================================
17-02-28 20:24:18.193 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:24:18.193 -08 000000050 INF: ======================================
17-02-28 20:24:18.193 -08 000000108 INF: ======================================
17-02-28 20:24:18.193 -08 000000033 INF: ======================================
17-02-28 20:24:18.194 -08 000000060 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:18.195 -08 000000060 INF: LFT weighted average best Z for top surface is at -0.159mm FC:B, C:3,L:5,T
17-02-28 20:24:18.195 -08 000000060 INF: ======================================
17-02-28 20:24:18.196 -08 000000052 INF: ======================================
17-02-28 20:24:18.197 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:24:18.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.198 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:24:18.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:24:18.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:24:18.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:24:18.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:24:18.200 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 7 of 40 seconds left, Waiting for image analysis===================
17-02-28 20:24:18.200 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 7 of 40 seconds left===================
17-02-28 20:24:18.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:24:18.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 1 - X = 79.69164 Y = 39.76308===================
17-02-28 20:24:18.223 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:24:18.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:18.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:24:18.224 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.224 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:24:18.225 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:24:18.225 -08 000000042 INF: Transformed XStagePosition from 80.79964 mm to 80.7823868412524 mm.
17-02-28 20:24:18.268 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":5,"Tile":1101,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF224","HCSMMF268","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.276 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5551593553983 mm.
17-02-28 20:24:18.276 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3551593553983 mm.
17-02-28 20:24:18.276 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4459093553983 mm.
17-02-28 20:24:18.347 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.347 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:24:18.348 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:18.348 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -157.3 um, section = E_1
17-02-28 20:24:18.350 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:18.351 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:18.355 -08 000000086 INF: ===================MoveEmissionFilters===================
17-02-28 20:24:18.356 -08 000000066 INF: ===================Move X,Y===================
17-02-28 20:24:18.358 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:18.358 -08 000000066 INF: ===================Move X,Y, Parallel===================
17-02-28 20:24:18.358 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:24:18.359 -08 000000077 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:24:18.359 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:18.360 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:18.361 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:24:18.361 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:18.367 -08 000000082 INF: ===================Move X Motor without settling===================
17-02-28 20:24:18.368 -08 000000082 INF: X Motor: Xmit PR VM\n
17-02-28 20:24:18.368 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:18.369 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:18.370 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:24:18.370 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:18.371 -08 000000108 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:24:18.371 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:18.372 -08 000000108 INF: ======================================
17-02-28 20:24:18.372 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:18.372 -08 000000102 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:24:18.373 -08 000000069 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:18.373 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:18.373 -08 000000069 INF: Y Motor: Moving to 64.5552 mm @25.000 mm/sec, started at 14.9082 mm
17-02-28 20:24:18.373 -08 000000108 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:24:18.373 -08 000000069 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:18.374 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:18.374 -08 000000108 INF: ======================================
17-02-28 20:24:18.374 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:18.375 -08 000000085 INF: ===================Camera Arm TDI===================
17-02-28 20:24:18.376 -08 000000108 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:24:18.376 -08 000000108 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:24:18.376 -08 000000085 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:18.376 -08 000000108 INF: ======================================
17-02-28 20:24:18.377 -08 000000085 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:18.377 -08 000000109 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:18.378 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:18.378 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:18.379 -08 000000109 INF: ======================================
17-02-28 20:24:18.380 -08 000000078 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:24:18.380 -08 000000109 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:24:18.380 -08 000000078 INF: ======================================
17-02-28 20:24:18.381 -08 000000109 INF: ======================================
17-02-28 20:24:18.382 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:18.382 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":5,"Tile":1102,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF219","HCSMMF232","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.382 -08 000000078 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:24:18.383 -08 000000078 INF: ======================================
17-02-28 20:24:18.383 -08 000000109 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:24:18.383 -08 000000087 INF: ======================================
17-02-28 20:24:18.383 -08 000000109 INF: ======================================
17-02-28 20:24:18.384 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:24:18.384 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:18.385 -08 000000078 INF: ======================================
17-02-28 20:24:18.385 -08 000000052 INF: ======================================
17-02-28 20:24:18.386 -08 000000108 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:18.388 -08 000000108 INF: ======================================
17-02-28 20:24:18.389 -08 000000086 INF: ======================================
17-02-28 20:24:18.434 -08 000000078 INF: FPGA: Recv ZSEL 
17-02-28 20:24:18.434 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":5,"Tile":1105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF256","HCSMMF277","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.435 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:24:18.435 -08 000000069 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:18.435 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:18.435 -08 000000082 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:24:18.435 -08 000000082 INF: X Motor: Xmit PR VI\n
17-02-28 20:24:18.435 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:18.436 -08 000000102 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:24:18.436 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":5,"Tile":1103,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF263","HCSMMF193","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.439 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":5,"Tile":1106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF222","HCSMMF231","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.440 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":5,"Tile":1109,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF250","HCSMMF239","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.441 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":5,"Tile":1104,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF191","HCSMMF182","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.441 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":5,"Tile":1107,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF280","HCSMMF287","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.442 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":5,"Tile":1113,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF247","HCSMMF212","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.443 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":5,"Tile":1110,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF218","HCSMMF282","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.443 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":5,"Tile":1108,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF275","HCSMMF246","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.444 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":5,"Tile":1112,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF223","HCSMMF226","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.445 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":5,"Tile":1114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF274","HCSMMF228","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.445 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":5,"Tile":1111,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF241","HCSMMF257","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.446 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":5,"Tile":1115,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF207","HCSMMF271","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.447 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":5,"Tile":1116,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF192","HCSMMF208","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.448 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":5,"Tile":1119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF196","HCSMMF190","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.448 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":5,"Tile":1118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF215","HCSMMF276","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.449 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":5,"Tile":1117,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF234","HCSMMF216","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.450 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":5,"Tile":1121,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF279","HCSMMF184","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.451 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":5,"Tile":1124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF243","HCSMMF278","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.452 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":5,"Tile":1125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF201","HCSMMF237","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.453 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":5,"Tile":1120,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF267","HCSMMF265","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.453 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":5,"Tile":1123,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF260","HCSMMF235","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.454 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":5,"Tile":1127,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF227","HCSMMF248","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.457 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":5,"Tile":1122,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF206","HCSMMF272","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.458 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":5,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF204","HCSMMF249","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.460 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":5,"Tile":1126,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF251","HCSMMF186","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:18.462 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.468 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:24:18.495 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:24:18.495 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:18.497 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:24:18.497 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:18.497 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:18.497 -08 000000082 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:24:18.497 -08 000000082 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:24:18.497 -08 000000082 INF: X Motor: Moving to 80.7824 mm @15.000 mm/sec, started at 79.6812 mm
17-02-28 20:24:18.497 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:18.497 -08 000000082 INF: X Motor: Xmit MA 8922\n
17-02-28 20:24:18.499 -08 000000102 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:24:18.499 -08 000000102 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:24:18.499 -08 000000102 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:24:18.561 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:24:18.561 -08 000000069 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:18.561 -08 000000082 INF: X Motor: Recv MA 8922\r\n>
17-02-28 20:24:18.561 -08 000000069 INF: Y Motor: Set target position to 5955516 encoder counts
17-02-28 20:24:18.561 -08 000000069 INF: Y Motor: Xmit s r0xca 5955516\r
17-02-28 20:24:18.561 -08 000000082 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:24:18.562 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:18.562 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:18.564 -08 000000102 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:24:18.564 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:18.566 -08 000000102 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:24:18.566 -08 000000102 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:24:18.566 -08 000000102 INF: Z Motor: Arming to move to -0.1173 mm
17-02-28 20:24:18.566 -08 000000102 INF: FPGA: Xmit ZYT 6435516 4\n
17-02-28 20:24:18.569 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.570 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:24:18.621 -08 000000098 INF: FPGA: Recv ZYT 
17-02-28 20:24:18.621 -08 000000102 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490819 enc / 14.908 mm / ) = 6435516 enc / 64.355 mm
17-02-28 20:24:18.621 -08 000000102 INF: FPGA: Xmit ZARM 30740\n
17-02-28 20:24:18.623 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:24:18.623 -08 000000069 INF: Y Motor: Start the move command
17-02-28 20:24:18.623 -08 000000069 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:18.652 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.658 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:24:18.682 -08 000000073 INF: FPGA: Recv ZARM
17-02-28 20:24:18.682 -08 000000102 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.8403 ms
17-02-28 20:24:18.682 -08 000000102 INF: Z Motor: ArmAbsStepped took 115.8868 ms
17-02-28 20:24:18.682 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:18.684 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:24:18.684 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:24:18.684 -08 000000069 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:24:18.684 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:18.685 -08 000000102 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:24:18.686 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:24:18.687 -08 000000102 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:24:18.687 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:24:18.689 -08 000000102 INF: ======================================
17-02-28 20:24:18.774 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.780 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:24:18.809 -08 000000069 INF: Y Motor: Unshifted Position: 1072321
17-02-28 20:24:18.859 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:18.891 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.896 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:24:18.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:18.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 6 of 40 seconds left===================
17-02-28 20:24:18.970 -08 000000085 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:18.970 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:18.970 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:18.984 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:18.985 -08 000000085 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:18.986 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:18.987 -08 000000085 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:19.122 -08 000000069 INF: Y Motor: Unshifted Position: 1777488
17-02-28 20:24:19.172 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:19.185 -08 000000082 INF: X Motor: Xmit PR ER\n
17-02-28 20:24:19.247 -08 000000082 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:24:19.247 -08 000000082 INF: X Motor: Moved to 80.7822 after 686 ms
17-02-28 20:24:19.247 -08 000000082 INF: ======================================
17-02-28 20:24:19.272 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:24:19.297 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:19.435 -08 000000069 INF: Y Motor: Unshifted Position: 2558342
17-02-28 20:24:19.485 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:19.585 -08 000000085 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:19.585 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:19.585 -08 000000085 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:19.600 -08 000000085 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:19.602 -08 000000085 INF: ===================Camera Arm TDI===================
17-02-28 20:24:19.603 -08 000000085 INF: ======================================
17-02-28 20:24:19.604 -08 000000077 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:19.605 -08 000000077 INF: ======================================
17-02-28 20:24:19.609 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:19.745 -08 000000069 INF: Y Motor: Unshifted Position: 3338280
17-02-28 20:24:19.795 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:19.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:19.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 5 of 40 seconds left===================
17-02-28 20:24:19.921 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.059 -08 000000069 INF: Y Motor: Unshifted Position: 4124184
17-02-28 20:24:20.109 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.234 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.369 -08 000000069 INF: Y Motor: Unshifted Position: 4901623
17-02-28 20:24:20.419 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.546 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.683 -08 000000069 INF: Y Motor: Unshifted Position: 5683359
17-02-28 20:24:20.733 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.856 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:20.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:20.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 4 of 40 seconds left===================
17-02-28 20:24:20.994 -08 000000069 INF: Y Motor: Unshifted Position: 5955518
17-02-28 20:24:20.994 -08 000000069 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:20.994 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:21.055 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:24:21.055 -08 000000069 INF: Y Motor: Moved to 64.5552 after 2371 ms
17-02-28 20:24:21.055 -08 000000069 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:21.118 -08 000000069 INF: Y Motor: Recv v 4096\r
17-02-28 20:24:21.118 -08 000000069 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:21.118 -08 000000069 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:21.182 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:24:21.182 -08 000000069 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:21.182 -08 000000069 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:21.244 -08 000000069 INF: Y Motor: Recv v 402653184\r
17-02-28 20:24:21.244 -08 000000069 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:24:21.244 -08 000000069 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:21.244 -08 000000069 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:21.306 -08 000000069 INF: Y Motor: Recv v 0\r
17-02-28 20:24:21.306 -08 000000069 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:21.306 -08 000000069 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:21.306 -08 000000069 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:21.367 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:24:21.367 -08 000000069 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:21.367 -08 000000069 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:21.432 -08 000000069 INF: Y Motor: Recv ok\r
17-02-28 20:24:21.432 -08 000000069 INF: ======================================
17-02-28 20:24:21.433 -08 000000066 INF: ===================Move X,Y===================
17-02-28 20:24:21.434 -08 000000066 INF: ======================================
17-02-28 20:24:21.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:21.436 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:21.436 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:24:21.436 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:24:21.493 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:21.493 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:24:21.558 -08 000000105 INF: FPGA: Recv ZFREQCL
17-02-28 20:24:21.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:24:21.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:21.559 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:21.617 -08 000000109 INF: FPGA: Recv TDIYERD 6455518
17-02-28 20:24:21.617 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455518 counts (64.555 mm)
17-02-28 20:24:21.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:21.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:21.619 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:21.619 -08 000000102 INF: ===================Set YMotor gains for scans===================
17-02-28 20:24:21.619 -08 000000102 INF: ======================================
17-02-28 20:24:21.620 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:21.620 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:24:21.620 -08 000000033 INF: FPGA: Xmit TDIYPOS 6344591\n
17-02-28 20:24:21.679 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:24:21.679 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:21.681 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:24:21.681 -08 000000033 INF: FPGA: Xmit TDIYARM3 139264 6435516 1 1\n
17-02-28 20:24:21.740 -08 000000073 INF: FPGA: Recv TDIYARM3
17-02-28 20:24:21.740 -08 000000033 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:21.742 -08 000000033 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:21.743 -08 000000033 INF: ======================================
17-02-28 20:24:21.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:21.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:21.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:21.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:21.746 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:21.746 -08 000000077 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:24:21.747 -08 000000078 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:24:21.747 -08 000000077 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:24:21.747 -08 000000077 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:24:21.747 -08 000000077 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:24:21.747 -08 000000078 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:24:21.747 -08 000000077 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:24:21.747 -08 000000078 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:24:21.747 -08 000000078 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:24:21.748 -08 000000078 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:24:21.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:21.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 3 of 40 seconds left===================
17-02-28 20:24:22.115 -08 000000105 INF: FPGA: Recv EX2MV
17-02-28 20:24:22.115 -08 000000105 INF: FPGA: Recv EX1MV
17-02-28 20:24:22.115 -08 000000078 INF: Excitation Filter 1: Moved -107 steps in 368.132 ms
17-02-28 20:24:22.115 -08 000000077 INF: Excitation Filter 2: Moved -107 steps in 368.3187 ms
17-02-28 20:24:22.115 -08 000000078 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.284 ms
17-02-28 20:24:22.115 -08 000000078 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.4038 ms
17-02-28 20:24:22.115 -08 000000077 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4205 ms
17-02-28 20:24:22.115 -08 000000077 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.5973 ms
17-02-28 20:24:22.116 -08 000000077 INF: ======================================
17-02-28 20:24:22.116 -08 000000078 INF: ======================================
17-02-28 20:24:22.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:22.118 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:22.119 -08 000000099 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:22.119 -08 000000087 INF: ===================FPGA Z Wait===================
17-02-28 20:24:22.119 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:22.119 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:24:22.119 -08 000000058 INF: Y Motor: Moving to 14.9068 mm @6.500 mm/sec, started at 64.5552 mm
17-02-28 20:24:22.119 -08 000000087 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:24:22.119 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:22.119 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:22.119 -08 000000099 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:24:22.120 -08 000000099 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:24:22.120 -08 000000033 INF: ===================Camera TDI, Parallel===================
17-02-28 20:24:22.120 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:24:22.121 -08 000000023 INF: ===================Camera TDI===================
17-02-28 20:24:22.122 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:22.122 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:22.123 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:22.123 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:22.179 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:24:22.179 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:22.179 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:22.241 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:24:22.241 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:22.272 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:22.272 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:22.273 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:22.273 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:22.303 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:24:22.303 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:22.303 -08 000000058 INF: Y Motor: Set target position to 990682 encoder counts
17-02-28 20:24:22.303 -08 000000058 INF: Y Motor: Xmit s r0xca 990682\r
17-02-28 20:24:22.368 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:24:22.368 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:24:22.368 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:22.422 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:22.422 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:22.423 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:22.423 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:22.429 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:24:22.429 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:24:22.429 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:22.489 -08 000000108 INF: FPGA: Recv ZWAIT 
17-02-28 20:24:22.489 -08 000000087 INF: ======================================
17-02-28 20:24:22.553 -08 000000058 INF: Y Motor: Unshifted Position: 5894317
17-02-28 20:24:22.572 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:24:22.572 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:24:22.572 -08 000000023 INF: ===================Camera #2 Frame #4===================
17-02-28 20:24:22.573 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:22.573 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:22.573 -08 000000098 INF: ===================Camera #0 Frame #5===================
17-02-28 20:24:22.603 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:22.729 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:22.742 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:22.742 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:22.742 -08 000000023 INF: ===================Camera #2 Frame #11===================
17-02-28 20:24:22.746 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:22.746 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:22.746 -08 000000098 INF: ===================Camera #0 Frame #11===================
17-02-28 20:24:22.867 -08 000000058 INF: Y Motor: Unshifted Position: 5689999
17-02-28 20:24:22.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:22.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 2 of 40 seconds left===================
17-02-28 20:24:22.917 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:22.923 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:22.923 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:22.923 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:22.923 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:22.923 -08 000000098 INF: ===================Camera #0 Frame #17===================
17-02-28 20:24:22.923 -08 000000023 INF: ===================Camera #2 Frame #17===================
17-02-28 20:24:23.040 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.094 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:24:23.094 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:24:23.094 -08 000000098 INF: ===================Camera #0 Frame #24===================
17-02-28 20:24:23.101 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:24:23.101 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:24:23.101 -08 000000023 INF: ===================Camera #2 Frame #24===================
17-02-28 20:24:23.179 -08 000000058 INF: Y Motor: Unshifted Position: 5487853
17-02-28 20:24:23.229 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.275 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:24:23.275 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:24:23.275 -08 000000098 INF: ===================Camera #0 Frame #30===================
17-02-28 20:24:23.279 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:24:23.279 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:24:23.279 -08 000000023 INF: ===================Camera #2 Frame #31===================
17-02-28 20:24:23.352 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.453 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:24:23.453 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:24:23.453 -08 000000098 INF: ===================Camera #0 Frame #37===================
17-02-28 20:24:23.457 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:24:23.457 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:24:23.457 -08 000000023 INF: ===================Camera #2 Frame #37===================
17-02-28 20:24:23.490 -08 000000058 INF: Y Motor: Unshifted Position: 5285050
17-02-28 20:24:23.540 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.635 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:24:23.635 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:24:23.635 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:24:23.635 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:24:23.635 -08 000000098 INF: ===================Camera #0 Frame #44===================
17-02-28 20:24:23.635 -08 000000023 INF: ===================Camera #2 Frame #44===================
17-02-28 20:24:23.666 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.801 -08 000000058 INF: Y Motor: Unshifted Position: 5082673
17-02-28 20:24:23.810 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:24:23.810 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:24:23.810 -08 000000023 INF: ===================Camera #2 Frame #50===================
17-02-28 20:24:23.816 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:24:23.816 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:24:23.816 -08 000000098 INF: ===================Camera #0 Frame #50===================
17-02-28 20:24:23.851 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:23.898 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 1 of 40 seconds left===================
17-02-28 20:24:23.977 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:23.979 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:24:23.979 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:24:23.979 -08 000000023 INF: ===================Camera #2 Frame #56===================
17-02-28 20:24:23.988 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:24:23.988 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:24:23.988 -08 000000098 INF: ===================Camera #0 Frame #57===================
17-02-28 20:24:24.115 -08 000000058 INF: Y Motor: Unshifted Position: 4880317
17-02-28 20:24:24.157 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:24:24.157 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:24:24.157 -08 000000023 INF: ===================Camera #2 Frame #63===================
17-02-28 20:24:24.159 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:24:24.159 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:24:24.161 -08 000000098 INF: ===================Camera #0 Frame #63===================
17-02-28 20:24:24.165 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:24.290 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:24.337 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:24:24.337 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:24:24.337 -08 000000098 INF: ===================Camera #0 Frame #69===================
17-02-28 20:24:24.338 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:24:24.338 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:24:24.338 -08 000000023 INF: ===================Camera #2 Frame #70===================
17-02-28 20:24:24.425 -08 000000058 INF: Y Motor: Unshifted Position: 4676861
17-02-28 20:24:24.475 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:24.513 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:24:24.513 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:24:24.513 -08 000000023 INF: ===================Camera #2 Frame #76===================
17-02-28 20:24:24.514 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:24:24.514 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:24:24.514 -08 000000098 INF: ===================Camera #0 Frame #76===================
17-02-28 20:24:24.601 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:24.649 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:24.649 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:24.649 -08 000000018 INF: WaitCommand(40000) end
17-02-28 20:24:24.649 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:24.651 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:24.651 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:24.691 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:24:24.691 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:24:24.691 -08 000000023 INF: ===================Camera #2 Frame #83===================
17-02-28 20:24:24.693 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:24:24.693 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:24:24.693 -08 000000098 INF: ===================Camera #0 Frame #83===================
17-02-28 20:24:24.738 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:24.738 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Selecting Reagent HIM (1)===================
17-02-28 20:24:24.738 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:24.738 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:24:24.739 -08 000000058 INF: Y Motor: Unshifted Position: 4474485
17-02-28 20:24:24.789 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:24.866 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:24:24.866 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:24:24.866 -08 000000023 INF: ===================Camera #2 Frame #89===================
17-02-28 20:24:24.867 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:24:24.867 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:24:24.867 -08 000000098 INF: ===================Camera #0 Frame #89===================
17-02-28 20:24:24.912 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.035 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:24:25.035 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:24:25.035 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:24:25.035 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:24:25.035 -08 000000098 INF: ===================Camera #0 Frame #95===================
17-02-28 20:24:25.035 -08 000000023 INF: ===================Camera #2 Frame #95===================
17-02-28 20:24:25.050 -08 000000058 INF: Y Motor: Unshifted Position: 4270389
17-02-28 20:24:25.100 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.203 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:24:25.203 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:24:25.203 -08 000000098 INF: ===================Camera #0 Frame #101===================
17-02-28 20:24:25.205 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:24:25.205 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:24:25.205 -08 000000023 INF: ===================Camera #2 Frame #101===================
17-02-28 20:24:25.226 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.361 -08 000000058 INF: Y Motor: Unshifted Position: 4068235
17-02-28 20:24:25.371 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:24:25.371 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:24:25.371 -08 000000098 INF: ===================Camera #0 Frame #108===================
17-02-28 20:24:25.374 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:24:25.374 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:24:25.374 -08 000000023 INF: ===================Camera #2 Frame #108===================
17-02-28 20:24:25.411 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.453 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:25.453 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:25.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:25.486 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:25.494 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 250, dispense rate 2500, volume 12, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:24:25.538 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.542 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:24:25.542 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:24:25.542 -08 000000098 INF: ===================Camera #0 Frame #114===================
17-02-28 20:24:25.546 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:24:25.546 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:24:25.546 -08 000000023 INF: ===================Camera #2 Frame #114===================
17-02-28 20:24:25.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:24:25.674 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:24:25.674 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:24:25.676 -08 000000058 INF: Y Motor: Unshifted Position: 3865866
17-02-28 20:24:25.711 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:24:25.711 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:24:25.711 -08 000000098 INF: ===================Camera #0 Frame #120===================
17-02-28 20:24:25.716 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:24:25.716 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:24:25.716 -08 000000023 INF: ===================Camera #2 Frame #120===================
17-02-28 20:24:25.726 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.774 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:24:25.848 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:25.861 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:25.879 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:24:25.879 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:24:25.879 -08 000000098 INF: ===================Camera #0 Frame #126===================
17-02-28 20:24:25.885 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:24:25.885 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:24:25.885 -08 000000023 INF: ===================Camera #2 Frame #126===================
17-02-28 20:24:25.961 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:25.986 -08 000000058 INF: Y Motor: Unshifted Position: 3661112
17-02-28 20:24:26.036 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:26.046 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:26.048 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:24:26.048 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:24:26.048 -08 000000098 INF: ===================Camera #0 Frame #132===================
17-02-28 20:24:26.055 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:24:26.055 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:24:26.055 -08 000000023 INF: ===================Camera #2 Frame #133===================
17-02-28 20:24:26.162 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:26.216 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:24:26.216 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:24:26.216 -08 000000098 INF: ===================Camera #0 Frame #139===================
17-02-28 20:24:26.228 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:24:26.228 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:24:26.228 -08 000000023 INF: ===================Camera #2 Frame #139===================
17-02-28 20:24:26.297 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:26.300 -08 000000058 INF: Y Motor: Unshifted Position: 3460056
17-02-28 20:24:26.350 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:26.360 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:26.389 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:24:26.389 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:24:26.389 -08 000000098 INF: ===================Camera #0 Frame #145===================
17-02-28 20:24:26.399 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:24:26.399 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:24:26.399 -08 000000023 INF: ===================Camera #2 Frame #145===================
17-02-28 20:24:26.460 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:24:26.473 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:26.548 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:26.557 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:24:26.557 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:24:26.557 -08 000000098 INF: ===================Camera #0 Frame #151===================
17-02-28 20:24:26.568 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:24:26.568 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:24:26.568 -08 000000023 INF: ===================Camera #2 Frame #152===================
17-02-28 20:24:26.611 -08 000000058 INF: Y Motor: Unshifted Position: 3255950
17-02-28 20:24:26.648 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:26.661 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:26.725 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:24:26.725 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:24:26.725 -08 000000098 INF: ===================Camera #0 Frame #157===================
17-02-28 20:24:26.736 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:26.736 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Aspirating port PortB===================
17-02-28 20:24:26.742 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:24:26.742 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:24:26.742 -08 000000023 INF: ===================Camera #2 Frame #158===================
17-02-28 20:24:26.787 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:26.830 -08 000000108 INF: RunCopyService queue size at 2/28/2017 8:24:26 PM is 2
17-02-28 20:24:26.836 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP2304R\r
17-02-28 20:24:26.893 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:24:26.893 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:24:26.893 -08 000000098 INF: ===================Camera #0 Frame #164===================
17-02-28 20:24:26.912 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:24:26.912 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:24:26.912 -08 000000023 INF: ===================Camera #2 Frame #164===================
17-02-28 20:24:26.923 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:26.924 -08 000000058 INF: Y Motor: Unshifted Position: 3054244
17-02-28 20:24:26.974 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.023 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:27.065 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:24:27.065 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:24:27.065 -08 000000098 INF: ===================Camera #0 Frame #170===================
17-02-28 20:24:27.082 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:24:27.082 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:24:27.082 -08 000000023 INF: ===================Camera #2 Frame #171===================
17-02-28 20:24:27.097 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.109 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:27.233 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:24:27.233 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:24:27.233 -08 000000098 INF: ===================Camera #0 Frame #176===================
17-02-28 20:24:27.234 -08 000000058 INF: Y Motor: Unshifted Position: 2850798
17-02-28 20:24:27.256 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:24:27.256 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:24:27.256 -08 000000023 INF: ===================Camera #2 Frame #177===================
17-02-28 20:24:27.284 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.359 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:27.402 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:24:27.402 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:24:27.402 -08 000000098 INF: ===================Camera #0 Frame #182===================
17-02-28 20:24:27.409 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:27.427 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:24:27.427 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:24:27.427 -08 000000023 INF: ===================Camera #2 Frame #183===================
17-02-28 20:24:27.547 -08 000000058 INF: Y Motor: Unshifted Position: 2647129
17-02-28 20:24:27.570 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:24:27.570 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:24:27.570 -08 000000098 INF: ===================Camera #0 Frame #188===================
17-02-28 20:24:27.597 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.598 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:24:27.598 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:24:27.598 -08 000000023 INF: ===================Camera #2 Frame #189===================
17-02-28 20:24:27.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:27.721 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:27.738 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:24:27.738 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:24:27.738 -08 000000098 INF: ===================Camera #0 Frame #195===================
17-02-28 20:24:27.767 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:24:27.767 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:24:27.767 -08 000000023 INF: ===================Camera #2 Frame #196===================
17-02-28 20:24:27.860 -08 000000058 INF: Y Motor: Unshifted Position: 2444766
17-02-28 20:24:27.909 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:24:27.909 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:24:27.909 -08 000000098 INF: ===================Camera #0 Frame #201===================
17-02-28 20:24:27.910 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:27.939 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:24:27.939 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:24:27.939 -08 000000023 INF: ===================Camera #2 Frame #202===================
17-02-28 20:24:27.983 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:28.032 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.045 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:28.077 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:24:28.077 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:24:28.077 -08 000000098 INF: ===================Camera #0 Frame #207===================
17-02-28 20:24:28.108 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:24:28.108 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:24:28.108 -08 000000023 INF: ===================Camera #2 Frame #208===================
17-02-28 20:24:28.172 -08 000000058 INF: Y Motor: Unshifted Position: 2241964
17-02-28 20:24:28.222 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.245 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:24:28.245 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:24:28.245 -08 000000098 INF: ===================Camera #0 Frame #213===================
17-02-28 20:24:28.277 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:24:28.277 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:24:28.277 -08 000000023 INF: ===================Camera #2 Frame #214===================
17-02-28 20:24:28.295 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:28.344 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.357 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:28.413 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:24:28.413 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:24:28.413 -08 000000098 INF: ===================Camera #0 Frame #220===================
17-02-28 20:24:28.446 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:24:28.446 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:24:28.446 -08 000000023 INF: ===================Camera #2 Frame #221===================
17-02-28 20:24:28.483 -08 000000058 INF: Y Motor: Unshifted Position: 2039814
17-02-28 20:24:28.533 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.584 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:24:28.584 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:24:28.584 -08 000000098 INF: ===================Camera #0 Frame #226===================
17-02-28 20:24:28.607 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:28.618 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:24:28.618 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:24:28.618 -08 000000023 INF: ===================Camera #2 Frame #227===================
17-02-28 20:24:28.656 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:28.752 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:24:28.752 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:24:28.752 -08 000000098 INF: ===================Camera #0 Frame #232===================
17-02-28 20:24:28.787 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:24:28.787 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:24:28.787 -08 000000023 INF: ===================Camera #2 Frame #233===================
17-02-28 20:24:28.797 -08 000000058 INF: Y Motor: Unshifted Position: 1836150
17-02-28 20:24:28.847 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.919 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:28.920 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:24:28.920 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:24:28.920 -08 000000098 INF: ===================Camera #0 Frame #238===================
17-02-28 20:24:28.956 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:24:28.956 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:24:28.956 -08 000000023 INF: ===================Camera #2 Frame #239===================
17-02-28 20:24:28.969 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:28.983 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:29.088 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:24:29.088 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:24:29.088 -08 000000098 INF: ===================Camera #0 Frame #244===================
17-02-28 20:24:29.107 -08 000000058 INF: Y Motor: Unshifted Position: 1633775
17-02-28 20:24:29.125 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:24:29.125 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:24:29.125 -08 000000023 INF: ===================Camera #2 Frame #246===================
17-02-28 20:24:29.157 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:29.233 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:29.256 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:24:29.256 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:24:29.256 -08 000000098 INF: ===================Camera #0 Frame #251===================
17-02-28 20:24:29.281 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:29.294 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:29.297 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:24:29.297 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:24:29.297 -08 000000023 INF: ===================Camera #2 Frame #252===================
17-02-28 20:24:29.418 -08 000000058 INF: Y Motor: Unshifted Position: 1429675
17-02-28 20:24:29.427 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:24:29.427 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:24:29.427 -08 000000098 INF: ===================Camera #0 Frame #257===================
17-02-28 20:24:29.466 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:24:29.466 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:24:29.466 -08 000000023 INF: ===================Camera #2 Frame #258===================
17-02-28 20:24:29.468 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:29.544 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:29.595 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:24:29.595 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:24:29.595 -08 000000098 INF: ===================Camera #0 Frame #263===================
17-02-28 20:24:29.596 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:29.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:29.635 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:24:29.635 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:24:29.635 -08 000000023 INF: ===================Camera #2 Frame #265===================
17-02-28 20:24:29.730 -08 000000058 INF: Y Motor: Unshifted Position: 1228164
17-02-28 20:24:29.763 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:24:29.763 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:24:29.763 -08 000000098 INF: ===================Camera #0 Frame #269===================
17-02-28 20:24:29.780 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:29.807 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:24:29.807 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:24:29.807 -08 000000023 INF: ===================Camera #2 Frame #271===================
17-02-28 20:24:29.852 -08 000000078 INF: FPGA: Recv TDIYWAIT
17-02-28 20:24:29.852 -08 000000099 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:29.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:29.854 -08 000000099 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:24:29.855 -08 000000085 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:24:29.855 -08 000000062 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:24:29.855 -08 000000085 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:24:29.855 -08 000000085 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:24:29.855 -08 000000085 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:24:29.855 -08 000000062 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:24:29.855 -08 000000085 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:24:29.855 -08 000000062 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:24:29.855 -08 000000062 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:24:29.856 -08 000000062 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:24:29.904 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:29.916 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:29.932 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:24:29.932 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:24:29.932 -08 000000098 INF: ===================Camera #0 Frame #272===================
17-02-28 20:24:29.941 -08 000000098 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:24:29.942 -08 000000098 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:30.043 -08 000000058 INF: Y Motor: Unshifted Position: 1025156
17-02-28 20:24:30.072 -08 000000098 INF: Camera #0 ReleaseBuffer
17-02-28 20:24:30.072 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:24:30.072 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:24:30.072 -08 000000023 INF: ===================Camera #2 Frame #272===================
17-02-28 20:24:30.072 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:24:30.075 -08 000000023 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:24:30.076 -08 000000023 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:30.093 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:30.100 -08 000000098 INF: ======================================
17-02-28 20:24:30.166 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:30.228 -08 000000105 INF: FPGA: Recv EX1MV
17-02-28 20:24:30.228 -08 000000105 INF: FPGA: Recv EX2MV
17-02-28 20:24:30.228 -08 000000062 INF: Excitation Filter 2: Moved 107 steps in 372.7601 ms
17-02-28 20:24:30.228 -08 000000062 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.9106 ms
17-02-28 20:24:30.228 -08 000000062 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.9859 ms
17-02-28 20:24:30.228 -08 000000085 INF: Excitation Filter 1: Moved 107 steps in 372.9689 ms
17-02-28 20:24:30.228 -08 000000085 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.222 ms
17-02-28 20:24:30.228 -08 000000085 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.3669 ms
17-02-28 20:24:30.228 -08 000000062 INF: ======================================
17-02-28 20:24:30.229 -08 000000085 INF: ======================================
17-02-28 20:24:30.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:30.230 -08 000000058 INF: Y Motor: Unshifted Position: 990683
17-02-28 20:24:30.230 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:30.230 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:30.230 -08 000000099 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:30.231 -08 000000099 INF: ======================================
17-02-28 20:24:30.243 -08 000000023 INF: Camera #2 ReleaseBuffer
17-02-28 20:24:30.243 -08 000000023 INF: ===================Camera TDI===================
17-02-28 20:24:30.278 -08 000000023 INF: ======================================
17-02-28 20:24:30.279 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:24:30.280 -08 000000033 INF: ======================================
17-02-28 20:24:30.292 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:24:30.292 -08 000000058 INF: Y Motor: Moved to 14.9068 after 7862 ms
17-02-28 20:24:30.292 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:30.356 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:24:30.356 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:30.356 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:30.418 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:24:30.418 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:30.418 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:30.479 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:30.480 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:24:30.480 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:24:30.480 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:30.480 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:30.540 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:30.541 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:24:30.541 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:30.541 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:30.541 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:30.605 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:24:30.605 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:30.605 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:30.666 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:24:30.666 -08 000000058 INF: ======================================
17-02-28 20:24:30.667 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:30.668 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:30.669 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:30.669 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:24:30.726 -08 000000023 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:24:30.726 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:30.790 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:30.791 -08 000000098 INF: FPGA: Recv TDIYERD 1490684
17-02-28 20:24:30.791 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:24:30.851 -08 000000062 INF: FPGA: Recv ZADCR 35977
17-02-28 20:24:30.851 -08 000000042 INF: At scan end Y pos = 14.907 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:24:30.851 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:24:30.852 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:30.913 -08 000000077 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:24:30.913 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:24:30.913 -08 000000042 INF: TDIScan finished after 12687.8224 ms
17-02-28 20:24:30.913 -08 000000042 INF: Image[0]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:24:30.913 -08 000000042 INF: Image[2]: Y should trigger at 63.446 mm, 2nd row was at 64.355 mm (error = 0.909 mm)
17-02-28 20:24:30.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:30.949 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.449 um
17-02-28 20:24:30.949 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:30.950 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:24:30.977 -08 000000087 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:24:30.977 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:30.978 -08 000000066 INF: ===================Dither Clean Up Command===================
17-02-28 20:24:30.978 -08 000000072 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:24:30.978 -08 000000060 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:24:30.978 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:24:30.978 -08 000000060 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:24:30.978 -08 000000060 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:24:30.979 -08 000000072 INF: ======================================
17-02-28 20:24:30.979 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:24:30.979 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:24:30.979 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:30.979 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:24:30.980 -08 000000051 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:24:30.982 -08 000000083 INF: ===================LFT:Extracting coords===================
17-02-28 20:24:31.007 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:31.008 -08 000000083 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:24:31.009 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.009 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.009 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.009 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.009 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:31.009 -08 000000050 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:31.009 -08 000000059 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:31.009 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:31.038 -08 000000045 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:31.038 -08 000000045 INF: FPGA: Recv ZSEL 
17-02-28 20:24:31.038 -08 000000051 INF: FPGA: Xmit ZDACW 41226\n
17-02-28 20:24:31.038 -08 000000086 INF: ======================================
17-02-28 20:24:31.040 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:24:31.040 -08 000000060 INF: ======================================
17-02-28 20:24:31.083 -08 000000077 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:31.083 -08 000000050 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:31.083 -08 000000059 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:31.083 -08 000000090 INF: FC:B, C:3,L:5, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:31.100 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:24:31.101 -08 000000051 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:24:31.101 -08 000000051 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:24:31.102 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:31.164 -08 000000035 INF: FPGA: Recv TDIBB
17-02-28 20:24:31.164 -08 000000051 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:24:31.165 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:31.165 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:31.165 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:31.165 -08 000000051 INF: ======================================
17-02-28 20:24:31.165 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:24:31.165 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:24:31.234 -08 000000059 INF: LFT found best fwhm score 2.176456 in 151 ms
17-02-28 20:24:31.234 -08 000000059 INF: LFT found good score at index 4065 with fwhm value 2.176456. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:5,T
17-02-28 20:24:31.234 -08 000000050 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:24:31.235 -08 000000050 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.15877620100884 in the next cycle, cycle 4 FC:B, C:3,L:5,T
17-02-28 20:24:31.235 -08 000000077 INF: LFT found best fwhm score 2.000044 in 152 ms
17-02-28 20:24:31.235 -08 000000077 INF: LFT found good score at index 3281 with fwhm value 2.000044. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:5,T
17-02-28 20:24:31.235 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.235 -08 000000050 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.235 -08 000000090 INF: LFT found best fwhm score 2.000008 in 152 ms
17-02-28 20:24:31.235 -08 000000090 INF: LFT found good score at index 8949 with fwhm value 2.000008. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:5,T
17-02-28 20:24:31.235 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.235 -08 000000059 INF: ======================================
17-02-28 20:24:31.235 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:24:31.235 -08 000000050 INF: ======================================
17-02-28 20:24:31.235 -08 000000077 INF: ======================================
17-02-28 20:24:31.235 -08 000000090 INF: ======================================
17-02-28 20:24:31.237 -08 000000083 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:31.237 -08 000000083 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:3,L:5,T
17-02-28 20:24:31.238 -08 000000083 INF: ======================================
17-02-28 20:24:31.239 -08 000000066 INF: ======================================
17-02-28 20:24:31.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:31.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:24:31.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:31.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:24:31.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:24:31.243 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:24:31.243 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 5 of 5 seconds left===================
17-02-28 20:24:31.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:24:31.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5, Swath 2 - X = 80.79964 Y = 39.76308===================
17-02-28 20:24:31.266 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:24:31.266 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:31.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:31.267 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:24:31.267 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:31.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 5===================
17-02-28 20:24:31.268 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:24:31.284 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.286 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:24:31.286 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:24:31.309 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":5,"Tile":1201,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF251","HCSMMF285","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.386 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:31.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.387 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:24:31.387 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:24:31.492 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":5,"Tile":1203,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF272","HCSMMF249","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.502 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":5,"Tile":1204,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF286","HCSMMF231","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.513 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":5,"Tile":1211,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF178","HCSMMF202","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.515 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":5,"Tile":1207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF177","HCSMMF222","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.516 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":5,"Tile":1206,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF207","HCSMMF180","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.518 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":5,"Tile":1209,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF176","HCSMMF271","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.519 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":5,"Tile":1202,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF204","HCSMMF188","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.521 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":5,"Tile":1205,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF262","HCSMMF179","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.522 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":5,"Tile":1213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF265","HCSMMF183","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.523 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":5,"Tile":1220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF258","HCSMMF191","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.525 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":5,"Tile":1217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF197","HCSMMF194","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.533 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":5,"Tile":1210,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF250","HCSMMF230","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.537 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":5,"Tile":1208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF260","HCSMMF196","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.540 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":5,"Tile":1214,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF241","HCSMMF257","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.542 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":5,"Tile":1216,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF287","HCSMMF277","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.558 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":5,"Tile":1215,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF214","HCSMMF280","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.560 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":5,"Tile":1218,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF201","HCSMMF254","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.562 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":5,"Tile":1212,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF240","HCSMMF259","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.563 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":5,"Tile":1219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF281","HCSMMF274","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.565 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":5,"Tile":1221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF237","HCSMMF232","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.568 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":5,"Tile":1226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF238","HCSMMF199","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.569 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":5,"Tile":1227,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF243","HCSMMF244","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.570 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":5,"Tile":1222,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF229","HCSMMF263","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.571 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":5,"Tile":1223,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF224","HCSMMF266","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.572 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":5,"Tile":1225,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF270","HCSMMF278","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.573 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":5,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF203","HCSMMF200","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.573 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":5,"Tile":1224,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF215","HCSMMF219","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:31.579 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:31.585 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:24:31.665 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:31.665 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:24:31.702 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:31.708 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:24:31.792 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:31.798 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:24:31.803 -08 000000037 INF: FPGA: Recv MIOCOMPR
17-02-28 20:24:31.803 -08 000000042 INF: Compensator: Moved OutOfPath in 416 ms
17-02-28 20:24:31.803 -08 000000042 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:24:31.804 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.805 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.805 -08 000000076 INF: ===================Move Tilt Motor 1===================
17-02-28 20:24:31.806 -08 000000089 INF: ===================Move Tilt Motor 2===================
17-02-28 20:24:31.806 -08 000000108 INF: ===================Move Tilt Motor 3===================
17-02-28 20:24:31.806 -08 000000076 INF: ======================================
17-02-28 20:24:31.806 -08 000000089 INF: ======================================
17-02-28 20:24:31.806 -08 000000108 INF: ======================================
17-02-28 20:24:31.807 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.808 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:31.814 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:24:31.822 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:24:31.822 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:24:31.822 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:24:31.822 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:31.823 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:31.826 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:24:31.826 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:24:31.826 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:24:31.867 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:31.868 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:31.868 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:24:31.868 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1573 mm
17-02-28 20:24:31.868 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:24:31.889 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:31.895 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:24:31.927 -08 000000062 INF: FPGA: Recv ZTRG 
17-02-28 20:24:31.927 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:24:31.989 -08 000000035 INF: FPGA: Recv ZYT 
17-02-28 20:24:31.989 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:24:31.989 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:24:32.003 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:32.054 -08 000000089 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:24:32.054 -08 000000089 INF: FPGA: Recv ZMV 
17-02-28 20:24:32.054 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:24:32.054 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.0221 ms
17-02-28 20:24:32.054 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:24:32.116 -08 000000087 INF: FPGA: Recv ZDACR 60292
17-02-28 20:24:32.116 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.8961 ms w/comms
17-02-28 20:24:32.116 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:24:32.116 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.1117 ms
17-02-28 20:24:32.117 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:32.117 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:24:32.126 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:24:32.126 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:24:32.126 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:24:32.126 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:24:32.126 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:24:32.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:32.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 4 of 5 seconds left===================
17-02-28 20:24:32.180 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:32.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:32.201 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:24:32.209 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:24:32.209 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:24:32.209 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:24:32.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:32.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:24:32.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:32.211 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:24:32.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:32.212 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:32.213 -08 000000085 INF: ===================MoveEmissionFilters===================
17-02-28 20:24:32.213 -08 000000082 INF: ===================Move X,Y===================
17-02-28 20:24:32.214 -08 000000082 INF: ===================Move X,Y, Parallel===================
17-02-28 20:24:32.214 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:32.214 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:32.214 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:32.215 -08 000000062 INF: ===================Move X Motor without settling===================
17-02-28 20:24:32.215 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:32.215 -08 000000062 INF: X Motor: Xmit PR VM\n
17-02-28 20:24:32.215 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:32.215 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:32.215 -08 000000045 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:32.215 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:32.215 -08 000000045 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9068 mm
17-02-28 20:24:32.215 -08 000000045 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:32.215 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:32.216 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:32.216 -08 000000073 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:24:32.216 -08 000000100 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:24:32.216 -08 000000073 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:24:32.216 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:24:32.216 -08 000000091 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:24:32.216 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:24:32.216 -08 000000073 INF: ======================================
17-02-28 20:24:32.217 -08 000000023 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:24:32.217 -08 000000074 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:24:32.217 -08 000000108 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:24:32.217 -08 000000105 INF: ======================================
17-02-28 20:24:32.217 -08 000000051 INF: ======================================
17-02-28 20:24:32.217 -08 000000023 INF: ======================================
17-02-28 20:24:32.217 -08 000000100 INF: ======================================
17-02-28 20:24:32.218 -08 000000091 INF: ======================================
17-02-28 20:24:32.218 -08 000000074 INF: ======================================
17-02-28 20:24:32.219 -08 000000035 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:32.219 -08 000000098 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:32.219 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:32.220 -08 000000108 INF: ======================================
17-02-28 20:24:32.220 -08 000000035 INF: ======================================
17-02-28 20:24:32.220 -08 000000098 INF: ======================================
17-02-28 20:24:32.221 -08 000000033 INF: ======================================
17-02-28 20:24:32.221 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:32.222 -08 000000087 INF: ======================================
17-02-28 20:24:32.223 -08 000000085 INF: ======================================
17-02-28 20:24:32.242 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:24:32.242 -08 000000045 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:32.242 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:32.288 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:24:32.304 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:24:32.304 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:32.306 -08 000000062 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:24:32.306 -08 000000062 INF: X Motor: Xmit PR VI\n
17-02-28 20:24:32.366 -08 000000062 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:24:32.366 -08 000000062 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:24:32.366 -08 000000062 INF: X Motor: Moving to 83.0106 mm @15.000 mm/sec, started at 80.7822 mm
17-02-28 20:24:32.366 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:24:32.366 -08 000000062 INF: X Motor: Xmit MA 9835\n
17-02-28 20:24:32.366 -08 000000045 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:32.366 -08 000000045 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:24:32.366 -08 000000045 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:24:32.428 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:24:32.428 -08 000000062 INF: X Motor: Recv MA 9835\r\n>
17-02-28 20:24:32.428 -08 000000045 INF: Y Motor: Start the move command
17-02-28 20:24:32.428 -08 000000045 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:32.428 -08 000000062 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:24:32.495 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:24:32.495 -08 000000045 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:24:32.495 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:32.615 -08 000000045 INF: Y Motor: Unshifted Position: 1072978
17-02-28 20:24:32.665 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:32.792 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:32.928 -08 000000045 INF: Y Motor: Unshifted Position: 1782345
17-02-28 20:24:32.978 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:33.052 -08 000000062 INF: X Motor: Xmit PR ER\n
17-02-28 20:24:33.102 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:33.118 -08 000000062 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:24:33.118 -08 000000062 INF: X Motor: Moved to 83.0112 after 689 ms
17-02-28 20:24:33.118 -08 000000062 INF: ======================================
17-02-28 20:24:33.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:33.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 3 of 5 seconds left===================
17-02-28 20:24:33.239 -08 000000045 INF: Y Motor: Unshifted Position: 2563208
17-02-28 20:24:33.289 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:33.415 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:33.551 -08 000000045 INF: Y Motor: Unshifted Position: 3345642
17-02-28 20:24:33.601 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:33.728 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:33.864 -08 000000045 INF: Y Motor: Unshifted Position: 4126548
17-02-28 20:24:33.914 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:34.040 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:34.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:34.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 2 of 5 seconds left===================
17-02-28 20:24:34.175 -08 000000045 INF: Y Motor: Unshifted Position: 4901488
17-02-28 20:24:34.225 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:34.351 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:34.487 -08 000000045 INF: Y Motor: Unshifted Position: 5680752
17-02-28 20:24:34.537 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:34.664 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:34.800 -08 000000045 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:24:34.800 -08 000000045 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:34.800 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:34.862 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:24:34.862 -08 000000045 INF: Y Motor: Moved to 64.5335 after 2367 ms
17-02-28 20:24:34.862 -08 000000045 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:34.924 -08 000000045 INF: Y Motor: Recv v 4096\r
17-02-28 20:24:34.924 -08 000000045 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:34.924 -08 000000045 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:34.990 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:24:34.990 -08 000000045 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:34.990 -08 000000045 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:35.049 -08 000000045 INF: Y Motor: Recv v 402653184\r
17-02-28 20:24:35.049 -08 000000045 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:24:35.049 -08 000000045 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:35.049 -08 000000045 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:35.111 -08 000000045 INF: Y Motor: Recv v 0\r
17-02-28 20:24:35.111 -08 000000045 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:35.111 -08 000000045 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:35.111 -08 000000045 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:35.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:35.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Delay 1 of 5 seconds left===================
17-02-28 20:24:35.174 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:24:35.174 -08 000000045 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:35.174 -08 000000045 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:35.238 -08 000000045 INF: Y Motor: Recv ok\r
17-02-28 20:24:35.238 -08 000000045 INF: ======================================
17-02-28 20:24:35.239 -08 000000082 INF: ===================Move X,Y===================
17-02-28 20:24:35.241 -08 000000082 INF: ======================================
17-02-28 20:24:35.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:35.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:35.243 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:24:35.243 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:24:35.300 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:35.300 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:24:35.360 -08 000000069 INF: FPGA: Recv ZFREQCL
17-02-28 20:24:35.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:24:35.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:35.361 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:35.422 -08 000000089 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:24:35.422 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:24:35.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:35.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:35.424 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:24:35.425 -08 000000100 INF: ===================Set YMotor gains for scans===================
17-02-28 20:24:35.425 -08 000000100 INF: ======================================
17-02-28 20:24:35.425 -08 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:24:35.426 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:24:35.427 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:24:35.428 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:24:35.428 -08 000000078 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:24:35.484 -08 000000069 INF: FPGA: Recv TDIYPOS
17-02-28 20:24:35.484 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:24:35.486 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:24:35.486 -08 000000078 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:24:35.546 -08 000000077 INF: FPGA: Recv TDIYARM2
17-02-28 20:24:35.547 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:24:35.548 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:24:35.549 -08 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:24:35.550 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:24:35.551 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:24:35.552 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:24:35.553 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:35.925 -08 000000078 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:24:35.925 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:24:35.925 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:35.940 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:24:35.942 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:36.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:36.166 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:36.166 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:24:36.167 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:36.266 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:24:36.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:24:36.299 -08 000000018 INF: Current Position of Pump is: 2304
17-02-28 20:24:36.323 -08 000000078 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:24:36.323 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:24:36.323 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:36.339 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:24:36.341 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:24:36.343 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:24:36.345 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:36.346 -08 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:24:36.347 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:36.349 -08 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:24:36.349 -08 000000078 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:24:36.349 -08 000000078 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:24:36.349 -08 000000078 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:24:36.358 -08 000000039 INF: FPGA: Recv ZYT 
17-02-28 20:24:36.358 -08 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:24:36.358 -08 000000078 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:24:36.399 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:24:36.423 -08 000000035 INF: FPGA: Recv ZARM
17-02-28 20:24:36.423 -08 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.9259 ms
17-02-28 20:24:36.423 -08 000000078 INF: Z Motor: ArmAbsStepped took 74.1221 ms
17-02-28 20:24:36.424 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:36.425 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:24:36.426 -08 000000078 INF: ======================================
17-02-28 20:24:36.427 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:36.428 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:36.429 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:36.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:36.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:36.431 -08 000000102 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:24:36.431 -08 000000100 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:24:36.432 -08 000000102 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:24:36.432 -08 000000102 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:24:36.432 -08 000000102 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:24:36.432 -08 000000100 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:24:36.432 -08 000000102 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:24:36.432 -08 000000100 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:24:36.432 -08 000000100 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:24:36.433 -08 000000100 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:24:36.486 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`2304 (0x03)\r\n(0xFF)
17-02-28 20:24:36.486 -08 000000018 INF: Current Position of Pump is: 2304
17-02-28 20:24:36.486 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1), Dispensing port PortC===================
17-02-28 20:24:36.586 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD2304R\r
17-02-28 20:24:36.672 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:36.772 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:36.795 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:24:36.795 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:24:36.795 -08 000000100 INF: Excitation Filter 1: Moved -107 steps in 363.3563 ms
17-02-28 20:24:36.795 -08 000000102 INF: Excitation Filter 2: Moved -107 steps in 363.5491 ms
17-02-28 20:24:36.795 -08 000000100 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 363.5494 ms
17-02-28 20:24:36.795 -08 000000102 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.6844 ms
17-02-28 20:24:36.795 -08 000000102 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.8156 ms
17-02-28 20:24:36.795 -08 000000100 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 363.67 ms
17-02-28 20:24:36.796 -08 000000102 INF: ======================================
17-02-28 20:24:36.796 -08 000000100 INF: ======================================
17-02-28 20:24:36.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:36.799 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:36.800 -08 000000045 INF: ===================Serial===================
17-02-28 20:24:36.800 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:24:36.801 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:36.801 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:36.801 -08 000000045 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:24:36.801 -08 000000039 INF: ===================Camera TDI, Parallel===================
17-02-28 20:24:36.801 -08 000000066 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:24:36.801 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:36.802 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:36.802 -08 000000051 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:24:36.802 -08 000000045 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:24:36.802 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:24:36.802 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:24:36.803 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:36.803 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:36.804 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:36.804 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:36.806 -08 000000051 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:24:36.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:36.859 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:36.859 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:36.859 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:36.924 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:36.924 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:36.953 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:36.953 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:36.954 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:36.954 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:36.986 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:36.986 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:36.986 -08 000000066 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:24:36.986 -08 000000066 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:24:37.048 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:37.048 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:24:37.048 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:37.103 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:37.103 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:37.104 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:37.104 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:37.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:37.110 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:37.110 -08 000000066 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:24:37.110 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:37.171 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:37.234 -08 000000066 INF: Y Motor: Unshifted Position: 5935379
17-02-28 20:24:37.253 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:37.253 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:37.254 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:37.254 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:37.284 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:37.403 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:24:37.403 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:24:37.403 -08 000000060 INF: ===================Camera #2 Frame #1===================
17-02-28 20:24:37.404 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:24:37.404 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:24:37.404 -08 000000082 INF: ===================Camera #0 Frame #1===================
17-02-28 20:24:37.411 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:37.421 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:37.484 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:37.484 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HIM (1)===================
17-02-28 20:24:37.484 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:24:37.547 -08 000000066 INF: Y Motor: Unshifted Position: 5888380
17-02-28 20:24:37.558 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:24:37.558 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:24:37.558 -08 000000060 INF: ===================Camera #2 Frame #3===================
17-02-28 20:24:37.559 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:24:37.559 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:24:37.559 -08 000000082 INF: ===================Camera #0 Frame #3===================
17-02-28 20:24:37.597 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:37.715 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:24:37.715 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:24:37.715 -08 000000060 INF: ===================Camera #2 Frame #4===================
17-02-28 20:24:37.718 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:24:37.718 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:24:37.718 -08 000000082 INF: ===================Camera #0 Frame #4===================
17-02-28 20:24:37.721 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:37.860 -08 000000066 INF: Y Motor: Unshifted Position: 5841871
17-02-28 20:24:37.869 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:37.869 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:37.869 -08 000000060 INF: ===================Camera #2 Frame #5===================
17-02-28 20:24:37.871 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:37.871 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:37.871 -08 000000082 INF: ===================Camera #0 Frame #5===================
17-02-28 20:24:37.910 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:37.920 -08 000000087 INF: FPGA: Recv ZWAIT 
17-02-28 20:24:37.920 -08 000000087 INF: FPGA: Recv TDIYWAIT
17-02-28 20:24:37.920 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:37.921 -08 000000045 INF: ===================Serial===================
17-02-28 20:24:37.922 -08 000000051 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:24:37.922 -08 000000045 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:24:37.923 -08 000000045 INF: ===================Serial===================
17-02-28 20:24:37.923 -08 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:24:37.923 -08 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:24:37.923 -08 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:24:37.923 -08 000000089 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:24:37.924 -08 000000089 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:24:37.924 -08 000000062 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:24:37.924 -08 000000045 INF: ======================================
17-02-28 20:24:37.924 -08 000000062 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:24:37.924 -08 000000062 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:24:37.924 -08 000000062 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:24:37.925 -08 000000062 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:24:38.023 -08 000000060 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:24:38.023 -08 000000060 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:24:38.023 -08 000000060 INF: ===================Camera #2 Frame #6===================
17-02-28 20:24:38.024 -08 000000082 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:24:38.024 -08 000000082 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:24:38.024 -08 000000082 INF: ===================Camera #0 Frame #6===================
17-02-28 20:24:38.027 -08 000000082 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:24:38.028 -08 000000082 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:38.028 -08 000000060 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:24:38.029 -08 000000060 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:38.035 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:38.055 -08 000000082 INF: Camera #0 ReleaseBuffer
17-02-28 20:24:38.055 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:24:38.056 -08 000000082 INF: ======================================
17-02-28 20:24:38.080 -08 000000060 INF: Camera #2 ReleaseBuffer
17-02-28 20:24:38.080 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:24:38.081 -08 000000060 INF: ======================================
17-02-28 20:24:38.083 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:24:38.084 -08 000000039 INF: ======================================
17-02-28 20:24:38.170 -08 000000066 INF: Y Motor: Unshifted Position: 5797060
17-02-28 20:24:38.220 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:38.296 -08 000000085 INF: FPGA: Recv EX2MV
17-02-28 20:24:38.296 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:24:38.296 -08 000000089 INF: Excitation Filter 2: Moved 107 steps in 372.2583 ms
17-02-28 20:24:38.296 -08 000000062 INF: Excitation Filter 1: Moved 107 steps in 371.6344 ms
17-02-28 20:24:38.296 -08 000000062 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8774 ms
17-02-28 20:24:38.296 -08 000000062 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.977 ms
17-02-28 20:24:38.296 -08 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.3948 ms
17-02-28 20:24:38.296 -08 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.7848 ms
17-02-28 20:24:38.296 -08 000000062 INF: ======================================
17-02-28 20:24:38.297 -08 000000089 INF: ======================================
17-02-28 20:24:38.298 -08 000000051 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:38.299 -08 000000051 INF: ======================================
17-02-28 20:24:38.359 -08 000000066 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:24:38.359 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:38.359 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:38.419 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:38.419 -08 000000066 INF: Y Motor: Moved to 62.9704 after 1309 ms
17-02-28 20:24:38.419 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:38.484 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:24:38.484 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:38.484 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:38.546 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:38.546 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:38.546 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:38.584 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:24:38.608 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:24:38.608 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:24:38.608 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:38.608 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:38.669 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:38.670 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:24:38.670 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:38.670 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:38.670 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:38.733 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:38.733 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:38.733 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:38.769 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:38.794 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:24:38.794 -08 000000066 INF: ======================================
17-02-28 20:24:38.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:38.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:24:38.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:38.798 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:24:38.854 -08 000000059 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:24:38.854 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:38.856 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:24:38.919 -08 000000085 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:24:38.919 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:24:38.981 -08 000000099 INF: FPGA: Recv ZADCR 2423
17-02-28 20:24:38.981 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:24:38.981 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:24:39.043 -08 000000109 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:24:39.043 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:24:39.043 -08 000000042 INF: TDIScan finished after 6841.8528 ms
17-02-28 20:24:39.043 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:24:39.043 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:24:39.043 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:24:39.105 -08 000000039 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:24:39.106 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:24:39.106 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.106 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.107 -08 000000023 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:24:39.107 -08 000000072 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:24:39.108 -08 000000100 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:24:39.108 -08 000000072 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:24:39.108 -08 000000072 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:24:39.108 -08 000000023 INF: ======================================
17-02-28 20:24:39.108 -08 000000100 INF: ======================================
17-02-28 20:24:39.168 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:24:39.168 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:39.168 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:24:39.169 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:24:39.169 -08 000000072 INF: ======================================
17-02-28 20:24:39.170 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.171 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:24:39.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.223 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:24:39.247 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.247 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:24:39.273 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.273 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:24:39.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:24:39.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:39.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:39.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:24:39.305 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:39.305 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:24:39.306 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:24:39.541 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:39.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:39.542 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:39.542 -08 000000018 INF: WaitCommand(30000) start
17-02-28 20:24:39.543 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 30 of 30 seconds left===================
17-02-28 20:24:39.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:24:40.013 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0882582574970215Best Z position at top surface = -0.159878577403736Best Z position at top surface + compensator offset = -0.137178577403736 C:3,L:6,T
17-02-28 20:24:40.015 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159878577403736
17-02-28 20:24:40.015 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97625
17-02-28 20:24:40.015 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0882582574970215
17-02-28 20:24:40.015 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.63158
17-02-28 20:24:40.015 -08 000000042 INF: Z-height at LaneTopSurface is -0.159878577403736.
17-02-28 20:24:40.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:40.148 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:24:40.148 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:24:40.165 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:40.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Focus Point 1===================
17-02-28 20:24:40.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.167 -08 000000042 INF: Lane 6, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:24:40.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.168 -08 000000085 INF: ===================Move Tilt Motor 1===================
17-02-28 20:24:40.168 -08 000000099 INF: ===================Move Tilt Motor 2===================
17-02-28 20:24:40.168 -08 000000069 INF: ===================Move Tilt Motor 3===================
17-02-28 20:24:40.169 -08 000000099 INF: ======================================
17-02-28 20:24:40.169 -08 000000085 INF: ======================================
17-02-28 20:24:40.170 -08 000000069 INF: ======================================
17-02-28 20:24:40.171 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.171 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.172 -08 000000042 INF: ETF Best Z: -0.1371786 mm (35960 DAC)
17-02-28 20:24:40.172 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.173 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:24:40.173 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:24:40.588 -08 000000045 INF: FPGA: Recv MIOCOMPF
17-02-28 20:24:40.589 -08 000000042 INF: Compensator: Moved IntoPath in 416 ms
17-02-28 20:24:40.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:40.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 29 of 30 seconds left===================
17-02-28 20:24:40.590 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:40.596 -08 000000042 INF: Swath 1 position calculated to be: {X=82.45663, Y=39.76308} from estimated center X= 82.97199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:24:40.596 -08 000000042 INF: Swath 2 position calculated to be: {X=83.56464, Y=39.76308} from estimated center X= 82.97199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:24:40.602 -08 000000042 INF: Swath 0: Converted transform from (-26.27021, 3.558215) pixels to (-0.00897, 0.00138) mm.
17-02-28 20:24:40.607 -08 000000042 INF: Swath 1: Converted transform from (-54.95967, 4.284478) pixels to (-0.018975, 0.00138) mm.
17-02-28 20:24:40.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:24:40.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:24:40.608 -08 000000042 INF: Transformed XStagePosition from 82.45663 mm to 82.4476645216346 mm.
17-02-28 20:24:40.620 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5544693554994 mm.
17-02-28 20:24:40.620 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3544693554994 mm.
17-02-28 20:24:40.620 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4452193554994 mm.
17-02-28 20:24:40.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:40.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:24:40.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:40.622 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:24:40.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:40.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:40.632 -08 000000039 INF: ===================MoveEmissionFilters===================
17-02-28 20:24:40.632 -08 000000087 INF: ===================Move X,Y===================
17-02-28 20:24:40.632 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:40.633 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:40.633 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:24:40.633 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:40.633 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:40.633 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:40.633 -08 000000087 INF: ===================Move X,Y, Parallel===================
17-02-28 20:24:40.633 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:40.633 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:40.633 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:40.634 -08 000000083 INF: ===================Move X Motor without settling===================
17-02-28 20:24:40.634 -08 000000035 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:40.634 -08 000000083 INF: X Motor: Xmit PR VM\n
17-02-28 20:24:40.634 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:40.634 -08 000000035 INF: Y Motor: Moving to 64.5545 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:24:40.634 -08 000000035 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:40.634 -08 000000035 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:40.634 -08 000000077 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:24:40.634 -08 000000108 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:24:40.634 -08 000000078 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:24:40.634 -08 000000102 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:24:40.634 -08 000000023 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:24:40.634 -08 000000078 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:24:40.635 -08 000000050 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:24:40.635 -08 000000109 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:24:40.635 -08 000000105 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:24:40.635 -08 000000023 INF: ======================================
17-02-28 20:24:40.635 -08 000000108 INF: ======================================
17-02-28 20:24:40.635 -08 000000050 INF: ======================================
17-02-28 20:24:40.635 -08 000000109 INF: ======================================
17-02-28 20:24:40.635 -08 000000051 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:24:40.636 -08 000000105 INF: ======================================
17-02-28 20:24:40.636 -08 000000051 INF: Z Motor: Moving to -0.1572 mm, started at -0.0100 mm
17-02-28 20:24:40.636 -08 000000051 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:24:40.636 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:40.637 -08 000000062 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:40.637 -08 000000077 INF: ======================================
17-02-28 20:24:40.638 -08 000000078 INF: ======================================
17-02-28 20:24:40.638 -08 000000102 INF: ======================================
17-02-28 20:24:40.638 -08 000000062 INF: ======================================
17-02-28 20:24:40.638 -08 000000069 INF: ======================================
17-02-28 20:24:40.639 -08 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:40.639 -08 000000052 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:40.640 -08 000000085 INF: ======================================
17-02-28 20:24:40.640 -08 000000052 INF: ======================================
17-02-28 20:24:40.641 -08 000000039 INF: ======================================
17-02-28 20:24:40.650 -08 000000082 INF: FPGA: Recv ZTRG 
17-02-28 20:24:40.650 -08 000000051 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:24:40.712 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:24:40.712 -08 000000051 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:24:40.712 -08 000000051 INF: FPGA: Xmit ZMV 41203\n
17-02-28 20:24:40.715 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:24:40.715 -08 000000035 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:40.715 -08 000000035 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:40.716 -08 000000083 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:24:40.716 -08 000000083 INF: X Motor: Xmit PR VI\n
17-02-28 20:24:40.776 -08 000000091 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:24:40.777 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:24:40.778 -08 000000083 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:24:40.778 -08 000000083 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:24:40.778 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:24:40.778 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:40.778 -08 000000083 INF: X Motor: Moving to 82.4477 mm @15.000 mm/sec, started at 83.0112 mm
17-02-28 20:24:40.778 -08 000000083 INF: X Motor: Xmit MA 9604\n
17-02-28 20:24:40.838 -08 000000083 INF: X Motor: Recv MA 9604\r\n>
17-02-28 20:24:40.838 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:24:40.838 -08 000000035 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:40.838 -08 000000083 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:24:40.838 -08 000000035 INF: Y Motor: Set target position to 5955447 encoder counts
17-02-28 20:24:40.838 -08 000000035 INF: Y Motor: Xmit s r0xca 5955447\r
17-02-28 20:24:40.898 -08 000000082 INF: FPGA: Recv ZMV 
17-02-28 20:24:40.898 -08 000000051 INF: Z Motor: MoveAndTrigger 'ZMV' command took 185.9636 ms
17-02-28 20:24:40.898 -08 000000051 INF: FPGA: Xmit ZDACR\n
17-02-28 20:24:40.900 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:24:40.900 -08 000000035 INF: Y Motor: Start the move command
17-02-28 20:24:40.900 -08 000000035 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:40.960 -08 000000073 INF: FPGA: Recv ZDACR 41203
17-02-28 20:24:40.960 -08 000000051 INF: Z Motor: MoveAndTrigger took 324.3692 ms w/comms
17-02-28 20:24:40.960 -08 000000051 INF: Z Motor: After move to -0.1572, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:24:40.960 -08 000000051 INF: Z Motor: MoveAbsStepped took 324.5623 ms
17-02-28 20:24:40.960 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:40.962 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:24:40.962 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:24:40.962 -08 000000035 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:24:40.962 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:40.963 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:24:40.963 -08 000000098 INF: ===================Camera Arm TDI===================
17-02-28 20:24:40.963 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:40.964 -08 000000098 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:40.964 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:40.964 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:40.965 -08 000000098 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:40.965 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:24:41.022 -08 000000076 INF: FPGA: Recv ZSEL 
17-02-28 20:24:41.022 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:41.023 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:24:41.087 -08 000000073 INF: FPGA: Recv TDIBB
17-02-28 20:24:41.088 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:41.089 -08 000000035 INF: Y Motor: Unshifted Position: 5878100
17-02-28 20:24:41.089 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:41.089 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:41.091 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:24:41.091 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:24:41.091 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:24:41.139 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:41.150 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:41.150 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:41.152 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:24:41.152 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:41.154 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:24:41.154 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:24:41.154 -08 000000089 INF: Z Motor: Arming to move to -0.1172 mm
17-02-28 20:24:41.154 -08 000000089 INF: FPGA: Xmit ZYT 6435447 4\n
17-02-28 20:24:41.213 -08 000000046 INF: FPGA: Recv ZYT 
17-02-28 20:24:41.214 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378100 enc / 63.781 mm / ) = 6435447 enc / 64.354 mm
17-02-28 20:24:41.214 -08 000000089 INF: FPGA: Xmit ZARM 30717\n
17-02-28 20:24:41.263 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:41.274 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:24:41.274 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.0434 ms
17-02-28 20:24:41.274 -08 000000089 INF: Z Motor: ArmAbsStepped took 119.7375 ms
17-02-28 20:24:41.274 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:41.276 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:24:41.277 -08 000000083 INF: X Motor: Xmit PR ER\n
17-02-28 20:24:41.277 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:24:41.277 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:24:41.279 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:24:41.279 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:24:41.281 -08 000000089 INF: ======================================
17-02-28 20:24:41.337 -08 000000083 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:24:41.337 -08 000000083 INF: X Motor: Moved to 82.4473 after 499 ms
17-02-28 20:24:41.337 -08 000000083 INF: ======================================
17-02-28 20:24:41.400 -08 000000035 INF: Y Motor: Unshifted Position: 5955448
17-02-28 20:24:41.400 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:41.400 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:41.461 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:24:41.461 -08 000000035 INF: Y Motor: Moved to 64.5545 after 499 ms
17-02-28 20:24:41.461 -08 000000035 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:41.527 -08 000000035 INF: Y Motor: Recv v 4096\r
17-02-28 20:24:41.527 -08 000000035 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:41.527 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:41.588 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:24:41.588 -08 000000035 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:41.588 -08 000000035 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:41.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:41.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 28 of 30 seconds left===================
17-02-28 20:24:41.649 -08 000000035 INF: Y Motor: Recv v 402653184\r
17-02-28 20:24:41.649 -08 000000035 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:24:41.649 -08 000000035 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:41.649 -08 000000035 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:41.711 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:24:41.711 -08 000000035 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:41.711 -08 000000035 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:41.711 -08 000000035 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:41.774 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:24:41.774 -08 000000035 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:41.774 -08 000000035 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:41.838 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:24:41.838 -08 000000035 INF: ======================================
17-02-28 20:24:41.839 -08 000000087 INF: ===================Move X,Y===================
17-02-28 20:24:41.840 -08 000000087 INF: ======================================
17-02-28 20:24:41.923 -08 000000098 INF: Camera #0 AttachBuffer (imageDataPtr = 56915988528 imgPtr = 56915988528 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:41.923 -08 000000098 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:41.923 -08 000000098 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:41.938 -08 000000098 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:41.940 -08 000000098 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:42.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:42.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 27 of 30 seconds left===================
17-02-28 20:24:43.006 -08 000000098 INF: Camera #2 AttachBuffer (imageDataPtr = 58727927856 imgPtr = 59633897520 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:43.007 -08 000000098 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:43.007 -08 000000098 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:43.022 -08 000000098 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:43.024 -08 000000098 INF: ===================Camera Arm TDI===================
17-02-28 20:24:43.025 -08 000000098 INF: ======================================
17-02-28 20:24:43.026 -08 000000051 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:43.027 -08 000000051 INF: ======================================
17-02-28 20:24:43.028 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:43.029 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:43.029 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:24:43.029 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:24:43.084 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:43.084 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:24:43.144 -08 000000108 INF: FPGA: Recv ZFREQCL
17-02-28 20:24:43.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:24:43.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:43.144 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:43.207 -08 000000085 INF: FPGA: Recv TDIYERD 6455448
17-02-28 20:24:43.207 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455448 counts (64.554 mm)
17-02-28 20:24:43.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:43.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:43.208 -08 000000109 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:43.208 -08 000000083 INF: ===================Set YMotor gains for scans===================
17-02-28 20:24:43.209 -08 000000083 INF: ======================================
17-02-28 20:24:43.209 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:43.209 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:24:43.210 -08 000000109 INF: FPGA: Xmit TDIYPOS 6344522\n
17-02-28 20:24:43.271 -08 000000082 INF: FPGA: Recv TDIYPOS
17-02-28 20:24:43.271 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:43.272 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:24:43.273 -08 000000109 INF: FPGA: Xmit TDIYARM3 139264 6435447 1 1\n
17-02-28 20:24:43.333 -08 000000066 INF: FPGA: Recv TDIYARM3
17-02-28 20:24:43.333 -08 000000109 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:43.335 -08 000000109 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:43.335 -08 000000109 INF: ======================================
17-02-28 20:24:43.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:43.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:43.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:43.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:43.339 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:43.339 -08 000000108 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:24:43.339 -08 000000100 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:24:43.339 -08 000000108 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:24:43.339 -08 000000108 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:24:43.339 -08 000000108 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:24:43.340 -08 000000100 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:24:43.340 -08 000000108 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:24:43.340 -08 000000100 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:24:43.340 -08 000000100 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:24:43.341 -08 000000100 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:24:43.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:43.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 26 of 30 seconds left===================
17-02-28 20:24:43.705 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:24:43.705 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:24:43.705 -08 000000100 INF: Excitation Filter 1: Moved -107 steps in 365.2704 ms
17-02-28 20:24:43.705 -08 000000100 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.4073 ms
17-02-28 20:24:43.705 -08 000000100 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.5164 ms
17-02-28 20:24:43.705 -08 000000108 INF: Excitation Filter 2: Moved -107 steps in 365.4929 ms
17-02-28 20:24:43.705 -08 000000108 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.6962 ms
17-02-28 20:24:43.705 -08 000000108 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.7674 ms
17-02-28 20:24:43.705 -08 000000100 INF: ======================================
17-02-28 20:24:43.705 -08 000000108 INF: ======================================
17-02-28 20:24:43.707 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:43.708 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:43.708 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:24:43.708 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:43.709 -08 000000069 INF: ===================FPGA Z Wait===================
17-02-28 20:24:43.709 -08 000000037 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:43.709 -08 000000037 INF: Y Motor: Moving to 14.9061 mm @6.500 mm/sec, started at 64.5545 mm
17-02-28 20:24:43.709 -08 000000037 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:43.709 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:43.709 -08 000000077 INF: ===================Camera TDI, Parallel===================
17-02-28 20:24:43.709 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:24:43.709 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:24:43.710 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:24:43.710 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:24:43.712 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:43.712 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:43.714 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:43.714 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:43.716 -08 000000069 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:24:43.772 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:24:43.772 -08 000000037 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:43.772 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:43.834 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:24:43.834 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:43.862 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:43.862 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:43.864 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:43.864 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:43.898 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:24:43.898 -08 000000037 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:43.898 -08 000000037 INF: Y Motor: Set target position to 990613 encoder counts
17-02-28 20:24:43.898 -08 000000037 INF: Y Motor: Xmit s r0xca 990613\r
17-02-28 20:24:43.958 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:24:43.958 -08 000000037 INF: Y Motor: Start the move command
17-02-28 20:24:43.958 -08 000000037 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:44.012 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:44.012 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:44.014 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:44.014 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:44.020 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:24:44.020 -08 000000037 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:24:44.020 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:44.080 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:24:44.080 -08 000000069 INF: ======================================
17-02-28 20:24:44.144 -08 000000037 INF: Y Motor: Unshifted Position: 5893807
17-02-28 20:24:44.162 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:24:44.162 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:24:44.162 -08 000000051 INF: ===================Camera #0 Frame #4===================
17-02-28 20:24:44.164 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:44.164 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:44.164 -08 000000082 INF: ===================Camera #2 Frame #5===================
17-02-28 20:24:44.194 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:44.321 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:44.324 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:24:44.324 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:24:44.324 -08 000000051 INF: ===================Camera #0 Frame #10===================
17-02-28 20:24:44.330 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:44.330 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:44.330 -08 000000082 INF: ===================Camera #2 Frame #11===================
17-02-28 20:24:44.458 -08 000000037 INF: Y Motor: Unshifted Position: 5690147
17-02-28 20:24:44.493 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:44.493 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:44.493 -08 000000051 INF: ===================Camera #0 Frame #17===================
17-02-28 20:24:44.499 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:44.499 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:44.499 -08 000000082 INF: ===================Camera #2 Frame #17===================
17-02-28 20:24:44.508 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:44.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:44.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 25 of 30 seconds left===================
17-02-28 20:24:44.631 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:44.665 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:24:44.665 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:24:44.665 -08 000000051 INF: ===================Camera #0 Frame #23===================
17-02-28 20:24:44.668 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:24:44.668 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:24:44.668 -08 000000082 INF: ===================Camera #2 Frame #23===================
17-02-28 20:24:44.772 -08 000000037 INF: Y Motor: Unshifted Position: 5486703
17-02-28 20:24:44.822 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:44.833 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:24:44.833 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:24:44.833 -08 000000051 INF: ===================Camera #0 Frame #29===================
17-02-28 20:24:44.837 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:24:44.837 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:24:44.837 -08 000000082 INF: ===================Camera #2 Frame #29===================
17-02-28 20:24:44.944 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:45.001 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:24:45.001 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:24:45.001 -08 000000051 INF: ===================Camera #0 Frame #35===================
17-02-28 20:24:45.006 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:24:45.006 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:24:45.006 -08 000000082 INF: ===================Camera #2 Frame #36===================
17-02-28 20:24:45.080 -08 000000037 INF: Y Motor: Unshifted Position: 5284982
17-02-28 20:24:45.130 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:45.170 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:24:45.170 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:24:45.170 -08 000000051 INF: ===================Camera #0 Frame #42===================
17-02-28 20:24:45.178 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:24:45.178 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:24:45.178 -08 000000082 INF: ===================Camera #2 Frame #42===================
17-02-28 20:24:45.257 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:45.341 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:24:45.341 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:24:45.341 -08 000000051 INF: ===================Camera #0 Frame #48===================
17-02-28 20:24:45.347 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:24:45.347 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:24:45.347 -08 000000082 INF: ===================Camera #2 Frame #48===================
17-02-28 20:24:45.393 -08 000000037 INF: Y Motor: Unshifted Position: 5081312
17-02-28 20:24:45.443 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:45.509 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:24:45.509 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:24:45.509 -08 000000051 INF: ===================Camera #0 Frame #54===================
17-02-28 20:24:45.516 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:24:45.516 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:24:45.516 -08 000000082 INF: ===================Camera #2 Frame #54===================
17-02-28 20:24:45.570 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:45.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:45.589 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 24 of 30 seconds left===================
17-02-28 20:24:45.679 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:24:45.679 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:24:45.679 -08 000000051 INF: ===================Camera #0 Frame #60===================
17-02-28 20:24:45.686 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:24:45.686 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:24:45.686 -08 000000082 INF: ===================Camera #2 Frame #61===================
17-02-28 20:24:45.704 -08 000000037 INF: Y Motor: Unshifted Position: 4877859
17-02-28 20:24:45.754 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:45.847 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:24:45.847 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:24:45.847 -08 000000051 INF: ===================Camera #0 Frame #67===================
17-02-28 20:24:45.859 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:24:45.859 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:24:45.859 -08 000000082 INF: ===================Camera #2 Frame #67===================
17-02-28 20:24:45.881 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.017 -08 000000037 INF: Y Motor: Unshifted Position: 4675490
17-02-28 20:24:46.019 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:24:46.019 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:24:46.019 -08 000000051 INF: ===================Camera #0 Frame #73===================
17-02-28 20:24:46.029 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:24:46.029 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:24:46.029 -08 000000082 INF: ===================Camera #2 Frame #73===================
17-02-28 20:24:46.067 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.188 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:24:46.188 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:24:46.188 -08 000000051 INF: ===================Camera #0 Frame #79===================
17-02-28 20:24:46.191 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.199 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:24:46.199 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:24:46.199 -08 000000082 INF: ===================Camera #2 Frame #79===================
17-02-28 20:24:46.331 -08 000000037 INF: Y Motor: Unshifted Position: 4471816
17-02-28 20:24:46.358 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:24:46.358 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:24:46.358 -08 000000051 INF: ===================Camera #0 Frame #85===================
17-02-28 20:24:46.370 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:24:46.370 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:24:46.370 -08 000000082 INF: ===================Camera #2 Frame #86===================
17-02-28 20:24:46.381 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.505 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.527 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:24:46.527 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:24:46.527 -08 000000051 INF: ===================Camera #0 Frame #92===================
17-02-28 20:24:46.543 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:24:46.543 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:24:46.543 -08 000000082 INF: ===================Camera #2 Frame #92===================
17-02-28 20:24:46.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:46.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 23 of 30 seconds left===================
17-02-28 20:24:46.641 -08 000000037 INF: Y Motor: Unshifted Position: 4270322
17-02-28 20:24:46.691 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.699 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:24:46.699 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:24:46.699 -08 000000051 INF: ===================Camera #0 Frame #98===================
17-02-28 20:24:46.713 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:24:46.713 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:24:46.713 -08 000000082 INF: ===================Camera #2 Frame #98===================
17-02-28 20:24:46.819 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:46.869 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:24:46.869 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:24:46.869 -08 000000051 INF: ===================Camera #0 Frame #104===================
17-02-28 20:24:46.884 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:24:46.884 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:24:46.884 -08 000000082 INF: ===================Camera #2 Frame #105===================
17-02-28 20:24:46.954 -08 000000037 INF: Y Motor: Unshifted Position: 4066861
17-02-28 20:24:47.004 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:47.038 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:24:47.038 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:24:47.038 -08 000000051 INF: ===================Camera #0 Frame #110===================
17-02-28 20:24:47.058 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:24:47.058 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:24:47.058 -08 000000082 INF: ===================Camera #2 Frame #111===================
17-02-28 20:24:47.128 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:47.207 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:24:47.207 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:24:47.207 -08 000000051 INF: ===================Camera #0 Frame #117===================
17-02-28 20:24:47.229 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:24:47.229 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:24:47.229 -08 000000082 INF: ===================Camera #2 Frame #117===================
17-02-28 20:24:47.267 -08 000000037 INF: Y Motor: Unshifted Position: 3863414
17-02-28 20:24:47.317 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:47.380 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:24:47.380 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:24:47.380 -08 000000051 INF: ===================Camera #0 Frame #123===================
17-02-28 20:24:47.400 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:24:47.400 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:24:47.400 -08 000000082 INF: ===================Camera #2 Frame #124===================
17-02-28 20:24:47.441 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:47.550 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:24:47.550 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:24:47.550 -08 000000051 INF: ===================Camera #0 Frame #129===================
17-02-28 20:24:47.574 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:24:47.574 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:24:47.574 -08 000000082 INF: ===================Camera #2 Frame #130===================
17-02-28 20:24:47.577 -08 000000037 INF: Y Motor: Unshifted Position: 3661695
17-02-28 20:24:47.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:47.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 22 of 30 seconds left===================
17-02-28 20:24:47.627 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:47.720 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:24:47.720 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:24:47.720 -08 000000051 INF: ===================Camera #0 Frame #135===================
17-02-28 20:24:47.745 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:24:47.745 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:24:47.745 -08 000000082 INF: ===================Camera #2 Frame #136===================
17-02-28 20:24:47.754 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:47.890 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:24:47.890 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:24:47.890 -08 000000051 INF: ===================Camera #0 Frame #142===================
17-02-28 20:24:47.891 -08 000000037 INF: Y Motor: Unshifted Position: 3456730
17-02-28 20:24:47.916 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:24:47.916 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:24:47.916 -08 000000082 INF: ===================Camera #2 Frame #143===================
17-02-28 20:24:47.941 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.063 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:24:48.063 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:24:48.063 -08 000000051 INF: ===================Camera #0 Frame #148===================
17-02-28 20:24:48.065 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.090 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:24:48.090 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:24:48.090 -08 000000082 INF: ===================Camera #2 Frame #149===================
17-02-28 20:24:48.201 -08 000000037 INF: Y Motor: Unshifted Position: 3255881
17-02-28 20:24:48.233 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:24:48.233 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:24:48.233 -08 000000051 INF: ===================Camera #0 Frame #154===================
17-02-28 20:24:48.251 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.261 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:24:48.261 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:24:48.261 -08 000000082 INF: ===================Camera #2 Frame #155===================
17-02-28 20:24:48.379 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.402 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:24:48.402 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:24:48.402 -08 000000051 INF: ===================Camera #0 Frame #161===================
17-02-28 20:24:48.432 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:24:48.432 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:24:48.432 -08 000000082 INF: ===================Camera #2 Frame #162===================
17-02-28 20:24:48.515 -08 000000037 INF: Y Motor: Unshifted Position: 3051569
17-02-28 20:24:48.565 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.575 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:24:48.575 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:24:48.575 -08 000000051 INF: ===================Camera #0 Frame #167===================
17-02-28 20:24:48.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:48.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 21 of 30 seconds left===================
17-02-28 20:24:48.606 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:24:48.606 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:24:48.606 -08 000000082 INF: ===================Camera #2 Frame #168===================
17-02-28 20:24:48.689 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.745 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:24:48.745 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:24:48.745 -08 000000051 INF: ===================Camera #0 Frame #173===================
17-02-28 20:24:48.777 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:24:48.777 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:24:48.777 -08 000000082 INF: ===================Camera #2 Frame #174===================
17-02-28 20:24:48.827 -08 000000037 INF: Y Motor: Unshifted Position: 2848780
17-02-28 20:24:48.877 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:48.915 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:24:48.915 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:24:48.915 -08 000000051 INF: ===================Camera #0 Frame #179===================
17-02-28 20:24:48.948 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:24:48.948 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:24:48.948 -08 000000082 INF: ===================Camera #2 Frame #181===================
17-02-28 20:24:49.001 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.085 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:24:49.085 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:24:49.085 -08 000000051 INF: ===================Camera #0 Frame #186===================
17-02-28 20:24:49.122 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:24:49.122 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:24:49.122 -08 000000082 INF: ===================Camera #2 Frame #187===================
17-02-28 20:24:49.137 -08 000000037 INF: Y Motor: Unshifted Position: 2647061
17-02-28 20:24:49.187 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.258 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:24:49.258 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:24:49.258 -08 000000051 INF: ===================Camera #0 Frame #192===================
17-02-28 20:24:49.293 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:24:49.293 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:24:49.293 -08 000000082 INF: ===================Camera #2 Frame #193===================
17-02-28 20:24:49.315 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.428 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:24:49.428 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:24:49.428 -08 000000051 INF: ===================Camera #0 Frame #198===================
17-02-28 20:24:49.451 -08 000000037 INF: Y Motor: Unshifted Position: 2442963
17-02-28 20:24:49.464 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:24:49.464 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:24:49.464 -08 000000082 INF: ===================Camera #2 Frame #200===================
17-02-28 20:24:49.501 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:49.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 20 of 30 seconds left===================
17-02-28 20:24:49.598 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:24:49.598 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:24:49.598 -08 000000051 INF: ===================Camera #0 Frame #205===================
17-02-28 20:24:49.625 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.638 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:24:49.638 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:24:49.638 -08 000000082 INF: ===================Camera #2 Frame #206===================
17-02-28 20:24:49.761 -08 000000037 INF: Y Motor: Unshifted Position: 2241249
17-02-28 20:24:49.771 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:24:49.771 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:24:49.771 -08 000000051 INF: ===================Camera #0 Frame #211===================
17-02-28 20:24:49.809 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:24:49.809 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:24:49.809 -08 000000082 INF: ===================Camera #2 Frame #212===================
17-02-28 20:24:49.811 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.939 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:49.941 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:24:49.941 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:24:49.941 -08 000000051 INF: ===================Camera #0 Frame #217===================
17-02-28 20:24:49.980 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:24:49.980 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:24:49.980 -08 000000082 INF: ===================Camera #2 Frame #219===================
17-02-28 20:24:50.075 -08 000000037 INF: Y Motor: Unshifted Position: 2035845
17-02-28 20:24:50.111 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:24:50.111 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:24:50.111 -08 000000051 INF: ===================Camera #0 Frame #223===================
17-02-28 20:24:50.125 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:50.154 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:24:50.154 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:24:50.154 -08 000000082 INF: ===================Camera #2 Frame #225===================
17-02-28 20:24:50.249 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:50.280 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:24:50.280 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:24:50.280 -08 000000051 INF: ===================Camera #0 Frame #230===================
17-02-28 20:24:50.325 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:24:50.325 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:24:50.325 -08 000000082 INF: ===================Camera #2 Frame #231===================
17-02-28 20:24:50.385 -08 000000037 INF: Y Motor: Unshifted Position: 1835427
17-02-28 20:24:50.435 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:50.451 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:24:50.451 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:24:50.451 -08 000000051 INF: ===================Camera #0 Frame #236===================
17-02-28 20:24:50.494 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:24:50.494 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:24:50.494 -08 000000082 INF: ===================Camera #2 Frame #238===================
17-02-28 20:24:50.563 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:50.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:50.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 19 of 30 seconds left===================
17-02-28 20:24:50.619 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:24:50.619 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:24:50.619 -08 000000051 INF: ===================Camera #0 Frame #242===================
17-02-28 20:24:50.666 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:24:50.666 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:24:50.666 -08 000000082 INF: ===================Camera #2 Frame #244===================
17-02-28 20:24:50.699 -08 000000037 INF: Y Motor: Unshifted Position: 1631325
17-02-28 20:24:50.749 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:50.789 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:24:50.789 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:24:50.789 -08 000000051 INF: ===================Camera #0 Frame #248===================
17-02-28 20:24:50.837 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:24:50.837 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:24:50.837 -08 000000082 INF: ===================Camera #2 Frame #250===================
17-02-28 20:24:50.875 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:50.959 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:24:50.959 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:24:50.959 -08 000000051 INF: ===================Camera #0 Frame #255===================
17-02-28 20:24:51.008 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:24:51.008 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:24:51.008 -08 000000082 INF: ===================Camera #2 Frame #257===================
17-02-28 20:24:51.011 -08 000000037 INF: Y Motor: Unshifted Position: 1428310
17-02-28 20:24:51.061 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:51.132 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:24:51.132 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:24:51.132 -08 000000051 INF: ===================Camera #0 Frame #261===================
17-02-28 20:24:51.182 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:24:51.182 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:24:51.182 -08 000000082 INF: ===================Camera #2 Frame #263===================
17-02-28 20:24:51.185 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:51.302 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:24:51.302 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:24:51.302 -08 000000051 INF: ===================Camera #0 Frame #267===================
17-02-28 20:24:51.321 -08 000000037 INF: Y Motor: Unshifted Position: 1226577
17-02-28 20:24:51.353 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:24:51.353 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:24:51.353 -08 000000082 INF: ===================Camera #2 Frame #269===================
17-02-28 20:24:51.371 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:51.447 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:24:51.447 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:51.449 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:24:51.450 -08 000000046 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:24:51.450 -08 000000074 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:24:51.450 -08 000000046 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:24:51.450 -08 000000046 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:24:51.450 -08 000000046 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:24:51.450 -08 000000074 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:24:51.450 -08 000000046 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:24:51.450 -08 000000074 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:24:51.450 -08 000000074 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:24:51.451 -08 000000074 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:24:51.472 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:24:51.472 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:24:51.472 -08 000000051 INF: ===================Camera #0 Frame #272===================
17-02-28 20:24:51.489 -08 000000051 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:24:51.490 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:51.499 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:51.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:51.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 18 of 30 seconds left===================
17-02-28 20:24:51.635 -08 000000037 INF: Y Motor: Unshifted Position: 1023786
17-02-28 20:24:51.651 -08 000000051 INF: Camera #0 ReleaseBuffer
17-02-28 20:24:51.651 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:24:51.651 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:24:51.651 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:24:51.651 -08 000000082 INF: ===================Camera #2 Frame #272===================
17-02-28 20:24:51.660 -08 000000082 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:24:51.661 -08 000000082 INF: ===================CameraTDI Cleanup===================
17-02-28 20:24:51.680 -08 000000051 INF: ======================================
17-02-28 20:24:51.685 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:51.818 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:24:51.818 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:24:51.818 -08 000000074 INF: Excitation Filter 1: Moved 107 steps in 367.7221 ms
17-02-28 20:24:51.818 -08 000000046 INF: Excitation Filter 2: Moved 107 steps in 367.9153 ms
17-02-28 20:24:51.818 -08 000000074 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 367.8822 ms
17-02-28 20:24:51.818 -08 000000074 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 367.989 ms
17-02-28 20:24:51.818 -08 000000046 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.0077 ms
17-02-28 20:24:51.818 -08 000000046 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.1783 ms
17-02-28 20:24:51.818 -08 000000074 INF: ======================================
17-02-28 20:24:51.818 -08 000000046 INF: ======================================
17-02-28 20:24:51.819 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:51.821 -08 000000045 INF: ======================================
17-02-28 20:24:51.822 -08 000000037 INF: Y Motor: Unshifted Position: 990612
17-02-28 20:24:51.822 -08 000000037 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:51.822 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:51.858 -08 000000082 INF: Camera #2 ReleaseBuffer
17-02-28 20:24:51.859 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:24:51.885 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:24:51.885 -08 000000037 INF: Y Motor: Moved to 14.9061 after 7864 ms
17-02-28 20:24:51.885 -08 000000037 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:51.893 -08 000000082 INF: ======================================
17-02-28 20:24:51.894 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:24:51.895 -08 000000077 INF: ======================================
17-02-28 20:24:51.947 -08 000000037 INF: Y Motor: Recv v 4097\r
17-02-28 20:24:51.947 -08 000000037 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:51.947 -08 000000037 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:52.011 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:24:52.011 -08 000000037 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:52.011 -08 000000037 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:52.071 -08 000000037 INF: Y Motor: Recv v 134217728\r
17-02-28 20:24:52.071 -08 000000037 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:24:52.071 -08 000000037 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:52.071 -08 000000037 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:52.134 -08 000000037 INF: Y Motor: Recv v 0\r
17-02-28 20:24:52.134 -08 000000037 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:52.134 -08 000000037 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:52.134 -08 000000037 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:52.195 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:24:52.195 -08 000000037 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:52.195 -08 000000037 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:52.257 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:24:52.257 -08 000000037 INF: ======================================
17-02-28 20:24:52.258 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:52.259 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:52.260 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.260 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:24:52.317 -08 000000074 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:24:52.317 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:52.383 -08 000000058 INF: FPGA: Recv TDIYERD 1490614
17-02-28 20:24:52.383 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:24:52.442 -08 000000039 INF: FPGA: Recv ZADCR 36088
17-02-28 20:24:52.442 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:24:52.442 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:24:52.504 -08 000000046 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:24:52.504 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:24:52.504 -08 000000042 INF: TDIScan finished after 11895.1874 ms
17-02-28 20:24:52.504 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:24:52.504 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:24:52.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.540 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.532 um
17-02-28 20:24:52.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.541 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:24:52.569 -08 000000089 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:24:52.569 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.570 -08 000000082 INF: ===================Dither Clean Up Command===================
17-02-28 20:24:52.570 -08 000000091 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:24:52.570 -08 000000077 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:24:52.570 -08 000000102 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:24:52.570 -08 000000091 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:24:52.570 -08 000000091 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:24:52.570 -08 000000077 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:24:52.570 -08 000000077 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:24:52.571 -08 000000102 INF: ======================================
17-02-28 20:24:52.571 -08 000000087 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:24:52.571 -08 000000099 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:52.572 -08 000000087 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:24:52.574 -08 000000099 INF: ===================LFT:Extracting coords===================
17-02-28 20:24:52.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:52.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 17 of 30 seconds left===================
17-02-28 20:24:52.600 -08 000000099 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:52.601 -08 000000099 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:24:52.601 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.602 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.602 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.602 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.602 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:52.602 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:52.602 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:52.602 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:24:52.631 -08 000000035 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:52.631 -08 000000035 INF: FPGA: Recv ZSEL 
17-02-28 20:24:52.631 -08 000000087 INF: FPGA: Xmit ZDACW 41203\n
17-02-28 20:24:52.631 -08 000000077 INF: ======================================
17-02-28 20:24:52.634 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:24:52.634 -08 000000091 INF: ======================================
17-02-28 20:24:52.676 -08 000000033 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:52.676 -08 000000046 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:52.676 -08 000000069 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:52.676 -08 000000090 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:24:52.693 -08 000000098 INF: FPGA: Recv ZDACW 
17-02-28 20:24:52.694 -08 000000087 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:24:52.694 -08 000000087 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:24:52.754 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:24:52.754 -08 000000087 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:24:52.755 -08 000000087 INF: ======================================
17-02-28 20:24:52.827 -08 000000069 INF: LFT found best fwhm score 2.148039 in 151 ms
17-02-28 20:24:52.827 -08 000000069 INF: LFT found good score at index 6697 with fwhm value 2.148039. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:6,T
17-02-28 20:24:52.828 -08 000000046 INF: LFT found best fwhm score 2.000258 in 152 ms
17-02-28 20:24:52.828 -08 000000046 INF: LFT found good score at index 7097 with fwhm value 2.000258. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:6,T
17-02-28 20:24:52.828 -08 000000033 INF: LFT found best fwhm score 2.00002 in 152 ms
17-02-28 20:24:52.828 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.828 -08 000000033 INF: LFT found good score at index 4113 with fwhm value 2.00002. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:6,T
17-02-28 20:24:52.828 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.828 -08 000000090 INF: LFT found best fwhm score 2.000061 in 152 ms
17-02-28 20:24:52.828 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.828 -08 000000090 INF: LFT found good score at index 7697 with fwhm value 2.000061. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:6,T
17-02-28 20:24:52.828 -08 000000069 INF: ======================================
17-02-28 20:24:52.828 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:24:52.828 -08 000000046 INF: ======================================
17-02-28 20:24:52.828 -08 000000033 INF: ======================================
17-02-28 20:24:52.829 -08 000000090 INF: ======================================
17-02-28 20:24:52.830 -08 000000099 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:24:52.830 -08 000000099 INF: LFT weighted average best Z for top surface is at -0.158mm FC:B, C:3,L:6,T
17-02-28 20:24:52.831 -08 000000099 INF: ======================================
17-02-28 20:24:52.832 -08 000000082 INF: ======================================
17-02-28 20:24:52.833 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:24:52.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:24:52.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:24:52.836 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 17 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:24:52.836 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 17 of 30 seconds left===================
17-02-28 20:24:52.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:24:52.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 1 - X = 82.45663 Y = 39.76308===================
17-02-28 20:24:52.859 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:24:52.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:24:52.859 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:24:52.859 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:52.860 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:24:52.860 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:24:52.860 -08 000000042 INF: Transformed XStagePosition from 83.56464 mm to 83.5456612296402 mm.
17-02-28 20:24:52.872 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5544693554994 mm.
17-02-28 20:24:52.872 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3544693554994 mm.
17-02-28 20:24:52.872 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4452193554994 mm.
17-02-28 20:24:52.874 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.875 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:24:52.875 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:52.875 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -157.2 um, section = F_1
17-02-28 20:24:52.877 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:52.878 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:52.886 -08 000000033 INF: ===================MoveEmissionFilters===================
17-02-28 20:24:52.894 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:24:52.895 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:24:52.897 -08 000000076 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:52.897 -08 000000102 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:52.897 -08 000000074 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:52.898 -08 000000058 INF: ===================Move X Motor without settling===================
17-02-28 20:24:52.898 -08 000000076 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:24:52.898 -08 000000058 INF: X Motor: Xmit PR VM\n
17-02-28 20:24:52.898 -08 000000076 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:24:52.898 -08 000000102 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:52.898 -08 000000076 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:52.899 -08 000000074 INF: Y Motor: Moving to 64.5545 mm @25.000 mm/sec, started at 14.9061 mm
17-02-28 20:24:52.899 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:52.899 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:52.900 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:52.900 -08 000000076 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:24:52.900 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:24:52.901 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:52.901 -08 000000099 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:24:52.901 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:24:52.902 -08 000000078 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:24:52.902 -08 000000099 INF: ======================================
17-02-28 20:24:52.902 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:52.902 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":6,"Tile":1103,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF203","HCSMMF280","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:52.902 -08 000000078 INF: ======================================
17-02-28 20:24:52.902 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:52.903 -08 000000052 INF: ===================Camera Arm TDI===================
17-02-28 20:24:52.903 -08 000000105 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:24:52.903 -08 000000105 INF: ======================================
17-02-28 20:24:52.903 -08 000000060 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:24:52.903 -08 000000102 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:24:52.903 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:52.903 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:52.904 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:52.904 -08 000000060 INF: ======================================
17-02-28 20:24:52.904 -08 000000059 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:24:52.904 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:52.904 -08 000000059 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:24:52.904 -08 000000109 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:24:52.904 -08 000000073 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:24:52.904 -08 000000059 INF: ======================================
17-02-28 20:24:52.904 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:24:52.905 -08 000000073 INF: ======================================
17-02-28 20:24:52.905 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:24:52.906 -08 000000102 INF: ======================================
17-02-28 20:24:52.906 -08 000000060 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:24:52.906 -08 000000060 INF: ======================================
17-02-28 20:24:52.906 -08 000000059 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:24:52.907 -08 000000059 INF: ======================================
17-02-28 20:24:52.907 -08 000000091 INF: ======================================
17-02-28 20:24:52.907 -08 000000052 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:52.908 -08 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:24:52.909 -08 000000086 INF: ======================================
17-02-28 20:24:52.910 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:24:52.912 -08 000000039 INF: ======================================
17-02-28 20:24:52.914 -08 000000033 INF: ======================================
17-02-28 20:24:52.925 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":6,"Tile":1101,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF198","HCSMMF270","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:52.947 -08 000000046 INF: FPGA: Recv ZSEL 
17-02-28 20:24:52.949 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:52.949 -08 000000109 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:24:52.950 -08 000000058 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:24:52.950 -08 000000058 INF: X Motor: Xmit PR VI\n
17-02-28 20:24:52.950 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:24:52.950 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:52.950 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:53.005 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:24:53.006 -08 000000109 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:24:53.007 -08 000000058 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:24:53.007 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:24:53.007 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:53.007 -08 000000058 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:24:53.007 -08 000000109 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:24:53.007 -08 000000058 INF: X Motor: Moving to 83.5457 mm @15.000 mm/sec, started at 82.4473 mm
17-02-28 20:24:53.007 -08 000000058 INF: X Motor: Xmit MA 10054\n
17-02-28 20:24:53.007 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:53.009 -08 000000109 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:24:53.010 -08 000000109 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:24:53.010 -08 000000109 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:24:53.053 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":6,"Tile":1104,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF214","HCSMMF275","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.056 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":6,"Tile":1105,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF252","HCSMMF236","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.062 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":6,"Tile":1109,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF189","HCSMMF281","HCSMMF230"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.065 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":6,"Tile":1106,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF279","HCSMMF250","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.067 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:24:53.067 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":6,"Tile":1107,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF241","HCSMMF233","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.067 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:53.068 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":6,"Tile":1108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF213","HCSMMF257","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.068 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":6,"Tile":1102,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF224","HCSMMF208","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.069 -08 000000058 INF: X Motor: Recv MA 10054\r\n>
17-02-28 20:24:53.069 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:24:53.069 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:53.069 -08 000000058 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:24:53.069 -08 000000074 INF: Y Motor: Set target position to 5955447 encoder counts
17-02-28 20:24:53.069 -08 000000074 INF: Y Motor: Xmit s r0xca 5955447\r
17-02-28 20:24:53.069 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":6,"Tile":1118,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF179","HCSMMF262","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.069 -08 000000109 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:24:53.070 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:53.072 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":6,"Tile":1111,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF245","HCSMMF284","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.072 -08 000000109 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:24:53.072 -08 000000109 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:24:53.072 -08 000000109 INF: Z Motor: Arming to move to -0.1172 mm
17-02-28 20:24:53.072 -08 000000109 INF: FPGA: Xmit ZYT 6435447 4\n
17-02-28 20:24:53.073 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":6,"Tile":1113,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF204","HCSMMF227","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.074 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":6,"Tile":1114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF196","HCSMMF191","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.075 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":6,"Tile":1110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF274","HCSMMF253","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.075 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":6,"Tile":1116,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF287","HCSMMF269","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.076 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":6,"Tile":1119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF283","HCSMMF238","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.077 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":6,"Tile":1112,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF264","HCSMMF265","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.078 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":6,"Tile":1120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF199","HCSMMF235","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.078 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":6,"Tile":1115,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF177","HCSMMF260","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.079 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":6,"Tile":1122,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF276","HCSMMF263","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.080 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":6,"Tile":1117,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF258","HCSMMF277","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.080 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":6,"Tile":1121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF244","HCSMMF185","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.081 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":6,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF225","HCSMMF255","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.082 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":6,"Tile":1126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF184","HCSMMF254","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.083 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":6,"Tile":1125,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF202","HCSMMF248","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.084 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":6,"Tile":1123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF193","HCSMMF221","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.086 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":6,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF285","HCSMMF251","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.087 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":6,"Tile":1127,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF207","HCSMMF195","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:24:53.111 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:53.117 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:24:53.129 -08 000000050 INF: FPGA: Recv ZYT 
17-02-28 20:24:53.129 -08 000000109 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490612 enc / 14.906 mm / ) = 6435447 enc / 64.354 mm
17-02-28 20:24:53.129 -08 000000109 INF: FPGA: Xmit ZARM 30717\n
17-02-28 20:24:53.131 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:24:53.131 -08 000000074 INF: Y Motor: Start the move command
17-02-28 20:24:53.131 -08 000000074 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:53.191 -08 000000072 INF: FPGA: Recv ZARM
17-02-28 20:24:53.191 -08 000000109 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.988 ms
17-02-28 20:24:53.191 -08 000000109 INF: Z Motor: ArmAbsStepped took 118.9145 ms
17-02-28 20:24:53.191 -08 000000109 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:24:53.193 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:24:53.193 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:24:53.193 -08 000000074 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:24:53.193 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:53.194 -08 000000109 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:24:53.195 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:24:53.196 -08 000000109 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:24:53.196 -08 000000109 INF: ===================TDI Scan Setup===================
17-02-28 20:24:53.198 -08 000000109 INF: ======================================
17-02-28 20:24:53.202 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:53.202 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:24:53.241 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:53.247 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:24:53.321 -08 000000074 INF: Y Motor: Unshifted Position: 1072519
17-02-28 20:24:53.338 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:53.344 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:24:53.371 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:53.433 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:53.439 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:24:53.492 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:53.524 -08 000000052 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:53.524 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:53.524 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:53.537 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:24:53.539 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:53.541 -08 000000052 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:24:53.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:53.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 16 of 30 seconds left===================
17-02-28 20:24:53.631 -08 000000074 INF: Y Motor: Unshifted Position: 1782278
17-02-28 20:24:53.681 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:53.693 -08 000000058 INF: X Motor: Xmit PR ER\n
17-02-28 20:24:53.755 -08 000000058 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:24:53.755 -08 000000058 INF: X Motor: Moved to 83.5459 after 686 ms
17-02-28 20:24:53.755 -08 000000058 INF: ======================================
17-02-28 20:24:53.805 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:53.815 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:24:53.945 -08 000000074 INF: Y Motor: Unshifted Position: 2558135
17-02-28 20:24:53.995 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:54.120 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:54.140 -08 000000052 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:24:54.140 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:24:54.141 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:24:54.156 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:24:54.158 -08 000000052 INF: ===================Camera Arm TDI===================
17-02-28 20:24:54.159 -08 000000052 INF: ======================================
17-02-28 20:24:54.160 -08 000000076 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:24:54.162 -08 000000076 INF: ======================================
17-02-28 20:24:54.255 -08 000000074 INF: Y Motor: Unshifted Position: 3345570
17-02-28 20:24:54.305 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:54.430 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:54.571 -08 000000074 INF: Y Motor: Unshifted Position: 4121477
17-02-28 20:24:54.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:54.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 15 of 30 seconds left===================
17-02-28 20:24:54.621 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:54.740 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:54.881 -08 000000074 INF: Y Motor: Unshifted Position: 4898913
17-02-28 20:24:54.931 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:55.052 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:55.191 -08 000000074 INF: Y Motor: Unshifted Position: 5683159
17-02-28 20:24:55.241 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:55.365 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:55.501 -08 000000074 INF: Y Motor: Unshifted Position: 5955449
17-02-28 20:24:55.501 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:24:55.501 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:55.566 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:24:55.566 -08 000000074 INF: Y Motor: Moved to 64.5545 after 2373 ms
17-02-28 20:24:55.566 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:24:55.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:55.590 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 14 of 30 seconds left===================
17-02-28 20:24:55.630 -08 000000074 INF: Y Motor: Recv v 4096\r
17-02-28 20:24:55.630 -08 000000074 INF: Y Motor: Status After move finished OK:
17-02-28 20:24:55.630 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:55.690 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:24:55.690 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:55.690 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:24:55.752 -08 000000074 INF: Y Motor: Recv v 402653184\r
17-02-28 20:24:55.752 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:24:55.752 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:24:55.752 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:24:55.814 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:24:55.814 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:24:55.814 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:24:55.814 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:55.876 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:24:55.876 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:24:55.876 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:55.938 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:24:55.938 -08 000000074 INF: ======================================
17-02-28 20:24:55.939 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:24:55.940 -08 000000037 INF: ======================================
17-02-28 20:24:55.941 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:24:55.942 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:55.942 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:24:55.942 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:24:56.003 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:24:56.003 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:24:56.063 -08 000000059 INF: FPGA: Recv ZFREQCL
17-02-28 20:24:56.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:24:56.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:56.064 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:24:56.126 -08 000000089 INF: FPGA: Recv TDIYERD 6455448
17-02-28 20:24:56.126 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455448 counts (64.554 mm)
17-02-28 20:24:56.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:56.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:56.128 -08 000000098 INF: ===================Set YMotor gains for scans===================
17-02-28 20:24:56.128 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:56.128 -08 000000098 INF: ======================================
17-02-28 20:24:56.129 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:56.129 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:24:56.130 -08 000000073 INF: FPGA: Xmit TDIYPOS 6344522\n
17-02-28 20:24:56.187 -08 000000087 INF: FPGA: Recv TDIYPOS
17-02-28 20:24:56.187 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:56.189 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:24:56.189 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6435447 1 1\n
17-02-28 20:24:56.249 -08 000000105 INF: FPGA: Recv TDIYARM3
17-02-28 20:24:56.250 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:24:56.251 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:24:56.252 -08 000000073 INF: ======================================
17-02-28 20:24:56.253 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:24:56.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:24:56.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:56.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:56.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:56.256 -08 000000066 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:24:56.256 -08 000000087 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:24:56.256 -08 000000066 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:24:56.256 -08 000000066 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:24:56.256 -08 000000066 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:24:56.256 -08 000000087 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:24:56.256 -08 000000066 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:24:56.256 -08 000000087 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:24:56.256 -08 000000087 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:24:56.257 -08 000000087 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:24:56.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:56.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 13 of 30 seconds left===================
17-02-28 20:24:56.626 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:24:56.626 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:24:56.627 -08 000000087 INF: Excitation Filter 1: Moved -107 steps in 369.5807 ms
17-02-28 20:24:56.627 -08 000000087 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.9427 ms
17-02-28 20:24:56.627 -08 000000087 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 370.0392 ms
17-02-28 20:24:56.627 -08 000000087 INF: ======================================
17-02-28 20:24:56.628 -08 000000066 INF: Excitation Filter 2: Moved -107 steps in 369.7264 ms
17-02-28 20:24:56.628 -08 000000066 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.7825 ms
17-02-28 20:24:56.628 -08 000000066 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.8551 ms
17-02-28 20:24:56.628 -08 000000066 INF: ======================================
17-02-28 20:24:56.629 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:56.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:24:56.632 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:24:56.632 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:24:56.632 -08 000000099 INF: ===================FPGA Z Wait===================
17-02-28 20:24:56.632 -08 000000073 INF: ===================Move Y Motor without settling===================
17-02-28 20:24:56.633 -08 000000099 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:24:56.633 -08 000000098 INF: ===================Camera TDI, Parallel===================
17-02-28 20:24:56.633 -08 000000073 INF: Y Motor: Moving to 14.9061 mm @6.500 mm/sec, started at 64.5545 mm
17-02-28 20:24:56.633 -08 000000073 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:24:56.633 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:24:56.633 -08 000000100 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:24:56.634 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:24:56.634 -08 000000059 INF: ===================Camera TDI===================
17-02-28 20:24:56.636 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:56.636 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:56.637 -08 000000100 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:24:56.637 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:56.638 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:56.689 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:24:56.689 -08 000000073 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:24:56.689 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:24:56.751 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:24:56.751 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:24:56.786 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:56.786 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:56.788 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:56.788 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:56.813 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:24:56.813 -08 000000073 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:24:56.813 -08 000000073 INF: Y Motor: Set target position to 990613 encoder counts
17-02-28 20:24:56.813 -08 000000073 INF: Y Motor: Xmit s r0xca 990613\r
17-02-28 20:24:56.875 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:24:56.875 -08 000000073 INF: Y Motor: Start the move command
17-02-28 20:24:56.875 -08 000000073 INF: Y Motor: Xmit t 1\r
17-02-28 20:24:56.936 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:56.936 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:56.938 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:24:56.938 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:24:56.940 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:24:56.940 -08 000000073 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:24:56.940 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.000 -08 000000072 INF: FPGA: Recv ZWAIT 
17-02-28 20:24:57.000 -08 000000099 INF: ======================================
17-02-28 20:24:57.064 -08 000000073 INF: Y Motor: Unshifted Position: 5891638
17-02-28 20:24:57.086 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:57.086 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:57.086 -08 000000059 INF: ===================Camera #0 Frame #5===================
17-02-28 20:24:57.088 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:24:57.088 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:24:57.088 -08 000000037 INF: ===================Camera #2 Frame #5===================
17-02-28 20:24:57.114 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.238 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.249 -08 000000062 INF: RunCopyService queue size at 2/28/2017 8:24:57 PM is 2
17-02-28 20:24:57.251 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:57.251 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:57.251 -08 000000059 INF: ===================Camera #0 Frame #11===================
17-02-28 20:24:57.254 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:24:57.254 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:24:57.254 -08 000000037 INF: ===================Camera #2 Frame #11===================
17-02-28 20:24:57.374 -08 000000073 INF: Y Motor: Unshifted Position: 5689926
17-02-28 20:24:57.419 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:57.419 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:57.419 -08 000000059 INF: ===================Camera #0 Frame #17===================
17-02-28 20:24:57.424 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.432 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:24:57.432 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:24:57.432 -08 000000037 INF: ===================Camera #2 Frame #17===================
17-02-28 20:24:57.551 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:57.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 12 of 30 seconds left===================
17-02-28 20:24:57.596 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:24:57.596 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:24:57.596 -08 000000059 INF: ===================Camera #0 Frame #24===================
17-02-28 20:24:57.611 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:24:57.611 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:24:57.611 -08 000000037 INF: ===================Camera #2 Frame #24===================
17-02-28 20:24:57.687 -08 000000073 INF: Y Motor: Unshifted Position: 5486485
17-02-28 20:24:57.737 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.777 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:24:57.777 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:24:57.777 -08 000000059 INF: ===================Camera #0 Frame #30===================
17-02-28 20:24:57.793 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:24:57.793 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:24:57.793 -08 000000037 INF: ===================Camera #2 Frame #31===================
17-02-28 20:24:57.861 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:57.953 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:24:57.953 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:24:57.953 -08 000000059 INF: ===================Camera #0 Frame #37===================
17-02-28 20:24:57.973 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:24:57.973 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:24:57.973 -08 000000037 INF: ===================Camera #2 Frame #37===================
17-02-28 20:24:57.998 -08 000000073 INF: Y Motor: Unshifted Position: 5284112
17-02-28 20:24:58.048 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:58.133 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:24:58.133 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:24:58.133 -08 000000059 INF: ===================Camera #0 Frame #43===================
17-02-28 20:24:58.146 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:24:58.146 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:24:58.146 -08 000000037 INF: ===================Camera #2 Frame #44===================
17-02-28 20:24:58.175 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:58.303 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:24:58.303 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:24:58.303 -08 000000059 INF: ===================Camera #0 Frame #50===================
17-02-28 20:24:58.311 -08 000000073 INF: Y Motor: Unshifted Position: 5079359
17-02-28 20:24:58.321 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:24:58.321 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:24:58.321 -08 000000037 INF: ===================Camera #2 Frame #50===================
17-02-28 20:24:58.361 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:58.484 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:24:58.484 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:24:58.484 -08 000000059 INF: ===================Camera #0 Frame #56===================
17-02-28 20:24:58.485 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:58.494 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:24:58.494 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:24:58.494 -08 000000037 INF: ===================Camera #2 Frame #57===================
17-02-28 20:24:58.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:58.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 11 of 30 seconds left===================
17-02-28 20:24:58.624 -08 000000073 INF: Y Motor: Unshifted Position: 4876993
17-02-28 20:24:58.656 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:24:58.656 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:24:58.656 -08 000000059 INF: ===================Camera #0 Frame #63===================
17-02-28 20:24:58.674 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:58.675 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:24:58.675 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:24:58.675 -08 000000037 INF: ===================Camera #2 Frame #63===================
17-02-28 20:24:58.798 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:58.827 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:24:58.827 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:24:58.828 -08 000000059 INF: ===================Camera #0 Frame #69===================
17-02-28 20:24:58.845 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:24:58.845 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:24:58.845 -08 000000037 INF: ===================Camera #2 Frame #70===================
17-02-28 20:24:58.936 -08 000000073 INF: Y Motor: Unshifted Position: 4674196
17-02-28 20:24:58.986 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:59.004 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:24:59.004 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:24:59.004 -08 000000059 INF: ===================Camera #0 Frame #75===================
17-02-28 20:24:59.028 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:24:59.028 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:24:59.028 -08 000000037 INF: ===================Camera #2 Frame #76===================
17-02-28 20:24:59.110 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:59.172 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:24:59.172 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:24:59.172 -08 000000059 INF: ===================Camera #0 Frame #82===================
17-02-28 20:24:59.197 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:24:59.197 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:24:59.197 -08 000000037 INF: ===================Camera #2 Frame #82===================
17-02-28 20:24:59.246 -08 000000073 INF: Y Motor: Unshifted Position: 4472473
17-02-28 20:24:59.296 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:59.353 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:24:59.353 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:24:59.353 -08 000000059 INF: ===================Camera #0 Frame #88===================
17-02-28 20:24:59.375 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:24:59.375 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:24:59.375 -08 000000037 INF: ===================Camera #2 Frame #89===================
17-02-28 20:24:59.423 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:59.530 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:24:59.530 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:24:59.530 -08 000000059 INF: ===================Camera #0 Frame #95===================
17-02-28 20:24:59.556 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:24:59.556 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:24:59.556 -08 000000037 INF: ===================Camera #2 Frame #96===================
17-02-28 20:24:59.559 -08 000000073 INF: Y Motor: Unshifted Position: 4269021
17-02-28 20:24:59.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:24:59.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 10 of 30 seconds left===================
17-02-28 20:24:59.609 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:59.710 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:24:59.710 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:24:59.710 -08 000000059 INF: ===================Camera #0 Frame #101===================
17-02-28 20:24:59.732 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:24:59.732 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:24:59.732 -08 000000037 INF: ===================Camera #2 Frame #102===================
17-02-28 20:24:59.733 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:24:59.870 -08 000000073 INF: Y Motor: Unshifted Position: 4065342
17-02-28 20:24:59.878 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:24:59.878 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:24:59.878 -08 000000059 INF: ===================Camera #0 Frame #108===================
17-02-28 20:24:59.901 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:24:59.901 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:24:59.901 -08 000000037 INF: ===================Camera #2 Frame #108===================
17-02-28 20:24:59.920 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.047 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.050 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:25:00.050 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:25:00.050 -08 000000059 INF: ===================Camera #0 Frame #114===================
17-02-28 20:25:00.071 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:25:00.071 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:25:00.071 -08 000000037 INF: ===================Camera #2 Frame #115===================
17-02-28 20:25:00.183 -08 000000073 INF: Y Motor: Unshifted Position: 3863198
17-02-28 20:25:00.219 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:25:00.219 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:25:00.219 -08 000000059 INF: ===================Camera #0 Frame #120===================
17-02-28 20:25:00.233 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.244 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:25:00.244 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:25:00.244 -08 000000037 INF: ===================Camera #2 Frame #121===================
17-02-28 20:25:00.357 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.387 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:25:00.387 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:25:00.387 -08 000000059 INF: ===================Camera #0 Frame #126===================
17-02-28 20:25:00.417 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:25:00.417 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:25:00.417 -08 000000037 INF: ===================Camera #2 Frame #127===================
17-02-28 20:25:00.496 -08 000000073 INF: Y Motor: Unshifted Position: 3654765
17-02-28 20:25:00.546 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.555 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:25:00.555 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:25:00.555 -08 000000059 INF: ===================Camera #0 Frame #132===================
17-02-28 20:25:00.589 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:25:00.589 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:25:00.589 -08 000000037 INF: ===================Camera #2 Frame #134===================
17-02-28 20:25:00.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:00.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 9 of 30 seconds left===================
17-02-28 20:25:00.670 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.724 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:25:00.724 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:25:00.724 -08 000000059 INF: ===================Camera #0 Frame #139===================
17-02-28 20:25:00.763 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:25:00.763 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:25:00.763 -08 000000037 INF: ===================Camera #2 Frame #140===================
17-02-28 20:25:00.806 -08 000000073 INF: Y Motor: Unshifted Position: 3456731
17-02-28 20:25:00.856 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:00.896 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:25:00.896 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:25:00.896 -08 000000059 INF: ===================Camera #0 Frame #145===================
17-02-28 20:25:00.934 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:25:00.934 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:25:00.934 -08 000000037 INF: ===================Camera #2 Frame #146===================
17-02-28 20:25:00.983 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.064 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:25:01.064 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:25:01.064 -08 000000059 INF: ===================Camera #0 Frame #151===================
17-02-28 20:25:01.105 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:25:01.105 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:25:01.105 -08 000000037 INF: ===================Camera #2 Frame #153===================
17-02-28 20:25:01.120 -08 000000073 INF: Y Motor: Unshifted Position: 3253928
17-02-28 20:25:01.170 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.233 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:25:01.233 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:25:01.233 -08 000000059 INF: ===================Camera #0 Frame #157===================
17-02-28 20:25:01.279 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:25:01.279 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:25:01.279 -08 000000037 INF: ===================Camera #2 Frame #159===================
17-02-28 20:25:01.294 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.401 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:25:01.401 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:25:01.401 -08 000000059 INF: ===================Camera #0 Frame #164===================
17-02-28 20:25:01.430 -08 000000073 INF: Y Motor: Unshifted Position: 3052222
17-02-28 20:25:01.450 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:25:01.450 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:25:01.450 -08 000000037 INF: ===================Camera #2 Frame #165===================
17-02-28 20:25:01.480 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.572 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:25:01.572 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:25:01.572 -08 000000059 INF: ===================Camera #0 Frame #170===================
17-02-28 20:25:01.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:01.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 8 of 30 seconds left===================
17-02-28 20:25:01.607 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.621 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:25:01.621 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:25:01.621 -08 000000037 INF: ===================Camera #2 Frame #172===================
17-02-28 20:25:01.740 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:25:01.740 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:25:01.740 -08 000000059 INF: ===================Camera #0 Frame #176===================
17-02-28 20:25:01.743 -08 000000073 INF: Y Motor: Unshifted Position: 2848777
17-02-28 20:25:01.793 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.795 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:25:01.795 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:25:01.795 -08 000000037 INF: ===================Camera #2 Frame #178===================
17-02-28 20:25:01.908 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:25:01.908 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:25:01.908 -08 000000059 INF: ===================Camera #0 Frame #182===================
17-02-28 20:25:01.917 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:01.967 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:25:01.967 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:25:01.967 -08 000000037 INF: ===================Camera #2 Frame #184===================
17-02-28 20:25:02.056 -08 000000073 INF: Y Motor: Unshifted Position: 2645113
17-02-28 20:25:02.076 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:25:02.076 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:25:02.076 -08 000000059 INF: ===================Camera #0 Frame #188===================
17-02-28 20:25:02.106 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:02.138 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:25:02.138 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:25:02.138 -08 000000037 INF: ===================Camera #2 Frame #191===================
17-02-28 20:25:02.230 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:02.244 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:25:02.244 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:25:02.244 -08 000000059 INF: ===================Camera #0 Frame #195===================
17-02-28 20:25:02.312 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:25:02.312 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:25:02.312 -08 000000037 INF: ===================Camera #2 Frame #197===================
17-02-28 20:25:02.368 -08 000000073 INF: Y Motor: Unshifted Position: 2443394
17-02-28 20:25:02.415 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:25:02.415 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:25:02.415 -08 000000059 INF: ===================Camera #0 Frame #201===================
17-02-28 20:25:02.418 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:02.482 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:25:02.482 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:25:02.482 -08 000000037 INF: ===================Camera #2 Frame #203===================
17-02-28 20:25:02.543 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:02.583 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:25:02.583 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:25:02.583 -08 000000059 INF: ===================Camera #0 Frame #207===================
17-02-28 20:25:02.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:02.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 7 of 30 seconds left===================
17-02-28 20:25:02.652 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:25:02.652 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:25:02.652 -08 000000037 INF: ===================Camera #2 Frame #210===================
17-02-28 20:25:02.680 -08 000000073 INF: Y Motor: Unshifted Position: 2239296
17-02-28 20:25:02.730 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:02.751 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:25:02.751 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:25:02.751 -08 000000059 INF: ===================Camera #0 Frame #213===================
17-02-28 20:25:02.824 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:25:02.824 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:25:02.824 -08 000000037 INF: ===================Camera #2 Frame #216===================
17-02-28 20:25:02.854 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:02.919 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:25:02.919 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:25:02.919 -08 000000059 INF: ===================Camera #0 Frame #220===================
17-02-28 20:25:02.990 -08 000000073 INF: Y Motor: Unshifted Position: 2037577
17-02-28 20:25:02.993 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:25:02.993 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:25:02.993 -08 000000037 INF: ===================Camera #2 Frame #222===================
17-02-28 20:25:03.040 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.090 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:25:03.090 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:25:03.090 -08 000000059 INF: ===================Camera #0 Frame #226===================
17-02-28 20:25:03.126 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.162 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:25:03.162 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:25:03.162 -08 000000037 INF: ===================Camera #2 Frame #228===================
17-02-28 20:25:03.256 -08 000000073 INF: Y Motor: Unshifted Position: 1864670
17-02-28 20:25:03.259 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:25:03.259 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:25:03.259 -08 000000059 INF: ===================Camera #0 Frame #232===================
17-02-28 20:25:03.306 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.331 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:25:03.331 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:25:03.331 -08 000000037 INF: ===================Camera #2 Frame #235===================
17-02-28 20:25:03.427 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:25:03.427 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:25:03.427 -08 000000059 INF: ===================Camera #0 Frame #238===================
17-02-28 20:25:03.431 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.503 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:25:03.503 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:25:03.503 -08 000000037 INF: ===================Camera #2 Frame #241===================
17-02-28 20:25:03.569 -08 000000073 INF: Y Motor: Unshifted Position: 1660353
17-02-28 20:25:03.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:03.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 6 of 30 seconds left===================
17-02-28 20:25:03.595 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:25:03.595 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:25:03.595 -08 000000059 INF: ===================Camera #0 Frame #244===================
17-02-28 20:25:03.619 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.672 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:25:03.672 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:25:03.672 -08 000000037 INF: ===================Camera #2 Frame #247===================
17-02-28 20:25:03.744 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.763 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:25:03.763 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:25:03.763 -08 000000059 INF: ===================Camera #0 Frame #251===================
17-02-28 20:25:03.840 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:25:03.840 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:25:03.840 -08 000000037 INF: ===================Camera #2 Frame #253===================
17-02-28 20:25:03.880 -08 000000073 INF: Y Motor: Unshifted Position: 1458846
17-02-28 20:25:03.930 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:03.934 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:25:03.934 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:25:03.934 -08 000000059 INF: ===================Camera #0 Frame #257===================
17-02-28 20:25:04.009 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:25:04.009 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:25:04.009 -08 000000037 INF: ===================Camera #2 Frame #260===================
17-02-28 20:25:04.055 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:04.102 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:25:04.102 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:25:04.102 -08 000000059 INF: ===================Camera #0 Frame #263===================
17-02-28 20:25:04.181 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:25:04.181 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:25:04.181 -08 000000037 INF: ===================Camera #2 Frame #266===================
17-02-28 20:25:04.191 -08 000000073 INF: Y Motor: Unshifted Position: 1256479
17-02-28 20:25:04.241 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:04.270 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:25:04.270 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:25:04.270 -08 000000059 INF: ===================Camera #0 Frame #269===================
17-02-28 20:25:04.351 -08 000000037 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:25:04.351 -08 000000037 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:25:04.351 -08 000000037 INF: ===================Camera #2 Frame #272===================
17-02-28 20:25:04.369 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:04.371 -08 000000037 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:25:04.373 -08 000000037 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:04.378 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:25:04.378 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:04.380 -08 000000100 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:25:04.380 -08 000000060 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:25:04.381 -08 000000108 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:25:04.381 -08 000000060 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:25:04.381 -08 000000060 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:25:04.381 -08 000000060 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:25:04.381 -08 000000108 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:25:04.381 -08 000000108 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:25:04.381 -08 000000108 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:25:04.381 -08 000000060 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:25:04.382 -08 000000108 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:25:04.504 -08 000000073 INF: Y Motor: Unshifted Position: 1053029
17-02-28 20:25:04.540 -08 000000037 INF: Camera #2 ReleaseBuffer
17-02-28 20:25:04.540 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:25:04.540 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:25:04.540 -08 000000059 INF: ===================Camera #0 Frame #272===================
17-02-28 20:25:04.540 -08 000000037 INF: ===================Camera TDI===================
17-02-28 20:25:04.549 -08 000000059 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:25:04.550 -08 000000059 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:04.554 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:04.571 -08 000000037 INF: ======================================
17-02-28 20:25:04.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:04.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 5 of 30 seconds left===================
17-02-28 20:25:04.678 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:04.691 -08 000000059 INF: Camera #0 ReleaseBuffer
17-02-28 20:25:04.692 -08 000000059 INF: ===================Camera TDI===================
17-02-28 20:25:04.724 -08 000000059 INF: ======================================
17-02-28 20:25:04.725 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:25:04.726 -08 000000098 INF: ======================================
17-02-28 20:25:04.754 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:25:04.754 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:25:04.754 -08 000000108 INF: Excitation Filter 2: Moved 107 steps in 372.9578 ms
17-02-28 20:25:04.754 -08 000000108 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.0627 ms
17-02-28 20:25:04.754 -08 000000108 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.1475 ms
17-02-28 20:25:04.754 -08 000000060 INF: Excitation Filter 1: Moved 107 steps in 373.1327 ms
17-02-28 20:25:04.754 -08 000000060 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.3562 ms
17-02-28 20:25:04.754 -08 000000060 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.4277 ms
17-02-28 20:25:04.754 -08 000000108 INF: ======================================
17-02-28 20:25:04.754 -08 000000060 INF: ======================================
17-02-28 20:25:04.756 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:04.757 -08 000000100 INF: ======================================
17-02-28 20:25:04.815 -08 000000073 INF: Y Motor: Unshifted Position: 990612
17-02-28 20:25:04.815 -08 000000073 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:04.815 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:04.880 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:25:04.880 -08 000000073 INF: Y Motor: Moved to 14.9061 after 7941 ms
17-02-28 20:25:04.880 -08 000000073 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:04.943 -08 000000073 INF: Y Motor: Recv v 4097\r
17-02-28 20:25:04.943 -08 000000073 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:04.943 -08 000000073 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:05.002 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:25:05.002 -08 000000073 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:05.002 -08 000000073 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:05.068 -08 000000073 INF: Y Motor: Recv v 134217728\r
17-02-28 20:25:05.068 -08 000000073 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:25:05.068 -08 000000073 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:05.068 -08 000000073 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:05.127 -08 000000073 INF: Y Motor: Recv v 0\r
17-02-28 20:25:05.127 -08 000000073 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:05.127 -08 000000073 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:05.127 -08 000000073 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:05.192 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:25:05.192 -08 000000073 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:05.192 -08 000000073 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:05.254 -08 000000073 INF: Y Motor: Recv ok\r
17-02-28 20:25:05.254 -08 000000073 INF: ======================================
17-02-28 20:25:05.255 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:05.256 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:05.257 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.257 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:25:05.314 -08 000000033 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:25:05.314 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:05.376 -08 000000086 INF: FPGA: Recv TDIYERD 1490614
17-02-28 20:25:05.376 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:25:05.439 -08 000000085 INF: FPGA: Recv ZADCR 36090
17-02-28 20:25:05.439 -08 000000042 INF: At scan end Y pos = 14.906 and Z pos = -0.138. Y moved -48.539 mm
17-02-28 20:25:05.439 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:25:05.502 -08 000000082 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:25:05.502 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:25:05.503 -08 000000042 INF: TDIScan finished after 12642.1607 ms
17-02-28 20:25:05.503 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:25:05.503 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.354 mm (error = 0.909 mm)
17-02-28 20:25:05.505 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.540 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.650 um
17-02-28 20:25:05.540 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.541 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:25:05.562 -08 000000098 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:25:05.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.563 -08 000000085 INF: ===================Dither Clean Up Command===================
17-02-28 20:25:05.563 -08 000000073 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:25:05.563 -08 000000091 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:25:05.563 -08 000000086 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:25:05.563 -08 000000091 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:05.564 -08 000000091 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:05.564 -08 000000086 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:25:05.564 -08 000000086 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:25:05.564 -08 000000073 INF: ======================================
17-02-28 20:25:05.564 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:25:05.564 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:05.565 -08 000000058 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:25:05.567 -08 000000109 INF: ===================LFT:Extracting coords===================
17-02-28 20:25:05.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:05.591 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 4 of 30 seconds left===================
17-02-28 20:25:05.593 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:05.594 -08 000000109 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:25:05.594 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.594 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.594 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.595 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.595 -08 000000074 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:05.595 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:05.595 -08 000000102 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:05.595 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:05.624 -08 000000059 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:05.624 -08 000000059 INF: FPGA: Recv ZSEL 
17-02-28 20:25:05.624 -08 000000058 INF: FPGA: Xmit ZDACW 41203\n
17-02-28 20:25:05.624 -08 000000086 INF: ======================================
17-02-28 20:25:05.626 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:05.626 -08 000000091 INF: ======================================
17-02-28 20:25:05.669 -08 000000046 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:05.669 -08 000000074 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:05.669 -08 000000102 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:05.669 -08 000000082 INF: FC:B, C:3,L:6, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:05.690 -08 000000083 INF: FPGA: Recv ZDACW 
17-02-28 20:25:05.691 -08 000000058 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:25:05.691 -08 000000058 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:25:05.749 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:25:05.749 -08 000000058 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:25:05.750 -08 000000058 INF: ======================================
17-02-28 20:25:05.820 -08 000000046 INF: LFT found best fwhm score 2.000075 in 151 ms
17-02-28 20:25:05.820 -08 000000046 INF: LFT found good score at index 5329 with fwhm value 2.000075. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:6,T
17-02-28 20:25:05.820 -08 000000082 INF: LFT found best fwhm score 2.000063 in 151 ms
17-02-28 20:25:05.820 -08 000000082 INF: LFT found good score at index 141 with fwhm value 2.000063. Next cycle, cycle 4 starting Z position for top surface is at -0.159 mm FC:B, C:3,L:6,T
17-02-28 20:25:05.820 -08 000000102 INF: LFT found best fwhm score 2.07191 in 151 ms
17-02-28 20:25:05.821 -08 000000074 INF: LFT found best fwhm score 2.000005 in 151 ms
17-02-28 20:25:05.821 -08 000000102 INF: LFT found good score at index 6901 with fwhm value 2.07191. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:6,T
17-02-28 20:25:05.821 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.821 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.821 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.821 -08 000000074 INF: LFT found good score at index 6405 with fwhm value 2.000005. Next cycle, cycle 4 starting Z position for top surface is at -0.158 mm FC:B, C:3,L:6,T
17-02-28 20:25:05.821 -08 000000046 INF: ======================================
17-02-28 20:25:05.821 -08 000000102 INF: ======================================
17-02-28 20:25:05.821 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:25:05.821 -08 000000082 INF: ======================================
17-02-28 20:25:05.822 -08 000000074 INF: ======================================
17-02-28 20:25:05.823 -08 000000109 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:05.824 -08 000000109 INF: LFT weighted average best Z for top surface is at -0.159mm FC:B, C:3,L:6,T
17-02-28 20:25:05.824 -08 000000109 INF: ======================================
17-02-28 20:25:05.825 -08 000000085 INF: ======================================
17-02-28 20:25:05.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.827 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:25:05.827 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.827 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:25:05.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:25:05.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:25:05.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:05.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:25:05.829 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:25:05.829 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 4 of 30 seconds left, Waiting for image analysis===================
17-02-28 20:25:05.829 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 4 of 30 seconds left===================
17-02-28 20:25:05.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:25:05.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6, Swath 2 - X = 83.56464 Y = 39.76308===================
17-02-28 20:25:05.853 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:25:05.853 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:25:05.853 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:25:05.853 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:05.854 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:25:05.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 6===================
17-02-28 20:25:05.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:25:05.902 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:05.904 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:05.904 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:05.904 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:05.922 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":6,"Tile":1202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF286","HCSMMF195","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.017 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":6,"Tile":1201,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF181","HCSMMF207","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.019 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":6,"Tile":1203,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF212","HCSMMF221","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.021 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":6,"Tile":1205,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF193","HCSMMF248","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.024 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":6,"Tile":1213,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF261","HCSMMF269","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.029 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":6,"Tile":1211,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF211","HCSMMF243","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.031 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:06.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:06.032 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:25:06.033 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:25:06.129 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":6,"Tile":1220,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF260","HCSMMF177","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.130 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":6,"Tile":1209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF214","HCSMMF267","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.131 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":6,"Tile":1206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF180","HCSMMF202","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.132 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":6,"Tile":1208,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF228","HCSMMF224","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.132 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":6,"Tile":1216,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF216","HCSMMF274","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.133 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":6,"Tile":1218,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF232","HCSMMF176","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.134 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":6,"Tile":1212,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF247","HCSMMF245","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.134 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":6,"Tile":1214,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF249","HCSMMF196","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.135 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":6,"Tile":1221,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF194","HCSMMF213","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.136 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":6,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF250","HCSMMF281","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.137 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":6,"Tile":1207,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF182","HCSMMF210","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.137 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":6,"Tile":1204,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF218","HCSMMF201","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.138 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":6,"Tile":1219,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF244","HCSMMF191","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.139 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":6,"Tile":1224,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF198","HCSMMF219","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.140 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":6,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF184","HCSMMF258","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.140 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":6,"Tile":1223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF282","HCSMMF205","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.141 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":6,"Tile":1225,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF227","HCSMMF188","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.142 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":6,"Tile":1226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF246","HCSMMF206","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.143 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":6,"Tile":1210,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF270","HCSMMF222","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.144 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":6,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF252","HCSMMF236","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.145 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":6,"Tile":1217,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF277","HCSMMF263","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.147 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":6,"Tile":1228,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF204","HCSMMF192","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:06.189 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:06.195 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:25:06.274 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:06.274 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:25:06.314 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:06.319 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:25:06.406 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:06.411 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:25:06.440 -08 000000059 INF: FPGA: Recv MIOCOMPR
17-02-28 20:25:06.440 -08 000000042 INF: Compensator: Moved OutOfPath in 406 ms
17-02-28 20:25:06.440 -08 000000042 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:25:06.441 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:06.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:06.442 -08 000000089 INF: ===================Move Tilt Motor 1===================
17-02-28 20:25:06.443 -08 000000060 INF: ===================Move Tilt Motor 2===================
17-02-28 20:25:06.443 -08 000000039 INF: ===================Move Tilt Motor 3===================
17-02-28 20:25:06.443 -08 000000039 INF: ======================================
17-02-28 20:25:06.443 -08 000000089 INF: ======================================
17-02-28 20:25:06.444 -08 000000060 INF: ======================================
17-02-28 20:25:06.444 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:06.445 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:06.451 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:25:06.460 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:25:06.460 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:25:06.460 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:25:06.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:06.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:06.464 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:25:06.464 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:25:06.464 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:25:06.501 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:06.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:06.502 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:25:06.502 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1572 mm
17-02-28 20:25:06.502 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:25:06.509 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:06.515 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:25:06.564 -08 000000035 INF: FPGA: Recv ZTRG 
17-02-28 20:25:06.564 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:25:06.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:06.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 3 of 30 seconds left===================
17-02-28 20:25:06.605 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:06.627 -08 000000082 INF: FPGA: Recv ZYT 
17-02-28 20:25:06.627 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:25:06.628 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:25:06.687 -08 000000037 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:25:06.687 -08 000000037 INF: FPGA: Recv ZMV 
17-02-28 20:25:06.687 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:25:06.687 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.3021 ms
17-02-28 20:25:06.687 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:25:06.749 -08 000000102 INF: FPGA: Recv ZDACR 60292
17-02-28 20:25:06.749 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.2927 ms w/comms
17-02-28 20:25:06.749 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:06.749 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.4653 ms
17-02-28 20:25:06.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:06.750 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:25:06.759 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:25:06.759 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:06.759 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:06.759 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:25:06.759 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:25:06.811 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:06.831 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:06.831 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:25:06.840 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:25:06.840 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:06.840 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:06.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:06.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:25:06.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:06.842 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:25:06.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:06.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:06.844 -08 000000073 INF: ===================MoveEmissionFilters===================
17-02-28 20:25:06.844 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:25:06.845 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:06.845 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:06.845 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:06.845 -08 000000085 INF: ===================Move X,Y, Parallel===================
17-02-28 20:25:06.845 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:06.846 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:06.846 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:06.846 -08 000000046 INF: ===================Move X Motor without settling===================
17-02-28 20:25:06.846 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:06.846 -08 000000046 INF: X Motor: Xmit PR VM\n
17-02-28 20:25:06.846 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:06.846 -08 000000108 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:06.846 -08 000000108 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9061 mm
17-02-28 20:25:06.847 -08 000000082 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:25:06.847 -08 000000100 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:25:06.847 -08 000000089 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:25:06.847 -08 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:25:06.847 -08 000000033 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:25:06.847 -08 000000087 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:25:06.847 -08 000000109 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:25:06.847 -08 000000082 INF: ======================================
17-02-28 20:25:06.847 -08 000000098 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:25:06.847 -08 000000090 INF: ======================================
17-02-28 20:25:06.847 -08 000000087 INF: ======================================
17-02-28 20:25:06.847 -08 000000108 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:06.848 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:06.848 -08 000000109 INF: ======================================
17-02-28 20:25:06.848 -08 000000100 INF: ======================================
17-02-28 20:25:06.848 -08 000000033 INF: ======================================
17-02-28 20:25:06.848 -08 000000098 INF: ======================================
17-02-28 20:25:06.849 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:06.849 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:06.850 -08 000000076 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:06.850 -08 000000089 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:25:06.850 -08 000000089 INF: ======================================
17-02-28 20:25:06.850 -08 000000059 INF: ======================================
17-02-28 20:25:06.851 -08 000000083 INF: ======================================
17-02-28 20:25:06.851 -08 000000076 INF: ======================================
17-02-28 20:25:06.851 -08 000000052 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:06.852 -08 000000052 INF: ======================================
17-02-28 20:25:06.854 -08 000000073 INF: ======================================
17-02-28 20:25:06.876 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:25:06.876 -08 000000108 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:06.876 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:06.892 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:25:06.941 -08 000000046 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:25:06.941 -08 000000046 INF: X Motor: Xmit PR VI\n
17-02-28 20:25:06.941 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:25:06.941 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:07.004 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:25:07.004 -08 000000108 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:07.004 -08 000000108 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:25:07.004 -08 000000108 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:25:07.005 -08 000000046 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:25:07.005 -08 000000046 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:25:07.005 -08 000000046 INF: X Motor: Moving to 85.7756 mm @15.000 mm/sec, started at 83.5459 mm
17-02-28 20:25:07.005 -08 000000046 INF: X Motor: Xmit MA 10967\n
17-02-28 20:25:07.064 -08 000000046 INF: X Motor: Recv MA 10967\r\n>
17-02-28 20:25:07.064 -08 000000046 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:25:07.066 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:25:07.066 -08 000000108 INF: Y Motor: Start the move command
17-02-28 20:25:07.066 -08 000000108 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:07.126 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:25:07.126 -08 000000108 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:25:07.126 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:07.250 -08 000000108 INF: Y Motor: Unshifted Position: 1069620
17-02-28 20:25:07.300 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:07.424 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:07.563 -08 000000108 INF: Y Motor: Unshifted Position: 1777286
17-02-28 20:25:07.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:07.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 2 of 30 seconds left===================
17-02-28 20:25:07.613 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:07.687 -08 000000046 INF: X Motor: Xmit PR ER\n
17-02-28 20:25:07.737 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:07.749 -08 000000046 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:25:07.749 -08 000000046 INF: X Motor: Moved to 85.7749 after 685 ms
17-02-28 20:25:07.749 -08 000000046 INF: ======================================
17-02-28 20:25:07.877 -08 000000108 INF: Y Motor: Unshifted Position: 2550626
17-02-28 20:25:07.927 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.048 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.187 -08 000000108 INF: Y Motor: Unshifted Position: 3335577
17-02-28 20:25:08.237 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.363 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.501 -08 000000108 INF: Y Motor: Unshifted Position: 4111483
17-02-28 20:25:08.551 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:08.592 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Delay 1 of 30 seconds left===================
17-02-28 20:25:08.675 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.813 -08 000000108 INF: Y Motor: Unshifted Position: 4896418
17-02-28 20:25:08.863 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:08.986 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:09.125 -08 000000108 INF: Y Motor: Unshifted Position: 5671321
17-02-28 20:25:09.175 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:09.296 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:09.434 -08 000000108 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:25:09.484 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:09.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.545 -08 000000018 INF: WaitCommand(30000) end
17-02-28 20:25:09.545 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.546 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.546 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:25:09.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:25:09.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:25:09.623 -08 000000108 INF: Y Motor: Unshifted Position: 5953351
17-02-28 20:25:09.623 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:09.623 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:09.685 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:25:09.685 -08 000000108 INF: Y Motor: Moved to 64.5335 after 2559 ms
17-02-28 20:25:09.685 -08 000000108 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:09.747 -08 000000108 INF: Y Motor: Recv v 4096\r
17-02-28 20:25:09.747 -08 000000108 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:09.747 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:09.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:25:09.756 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:25:09.756 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:25:09.757 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°===================
17-02-28 20:25:09.757 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.758 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:09.758 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:09.808 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:09.808 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Selecting Reagent HB2 (5)===================
17-02-28 20:25:09.808 -08 000000018 INF: Valve A1: Go to position 5
17-02-28 20:25:09.808 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:25:09.809 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:25:09.809 -08 000000108 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:09.809 -08 000000108 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:09.870 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 1\r
17-02-28 20:25:09.870 -08 000000018 INF: Valve A1: 110.570 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:25:09.870 -08 000000018 INF: Valve A1: Taking shortest path 'CW' from 1 to 5
17-02-28 20:25:09.870 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CW5\r
17-02-28 20:25:09.870 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:25:09.870 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:25:09.871 -08 000000108 INF: Y Motor: Recv v 402653184\r
17-02-28 20:25:09.871 -08 000000108 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:25:09.871 -08 000000108 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:09.871 -08 000000108 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:09.933 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:25:09.933 -08 000000108 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:09.933 -08 000000108 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:09.933 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:09.996 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:25:09.996 -08 000000108 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:09.996 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:10.058 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:25:10.058 -08 000000108 INF: ======================================
17-02-28 20:25:10.059 -08 000000085 INF: ===================Move X,Y===================
17-02-28 20:25:10.060 -08 000000085 INF: ======================================
17-02-28 20:25:10.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:10.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:10.063 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:25:10.063 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:25:10.120 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:10.120 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:25:10.180 -08 000000077 INF: FPGA: Recv ZFREQCL
17-02-28 20:25:10.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:25:10.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:10.181 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:10.246 -08 000000098 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:25:10.246 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:25:10.246 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:10.247 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:10.248 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:25:10.248 -08 000000045 INF: ===================Set YMotor gains for scans===================
17-02-28 20:25:10.248 -08 000000045 INF: ======================================
17-02-28 20:25:10.248 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:25:10.249 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:25:10.250 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:25:10.251 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:25:10.251 -08 000000089 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:25:10.308 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:25:10.308 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:25:10.311 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:25:10.311 -08 000000089 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:25:10.369 -08 000000082 INF: FPGA: Recv TDIYARM2
17-02-28 20:25:10.369 -08 000000089 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:25:10.371 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:25:10.372 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:25:10.372 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:25:10.374 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:25:10.375 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:25:10.375 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:10.432 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 5\r
17-02-28 20:25:10.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:10.432 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Opening shutoff valve===================
17-02-28 20:25:10.744 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:25:10.744 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:25:10.744 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:10.759 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:25:10.761 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:10.930 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:10.930 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:10.930 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:10.994 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:11.002 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 500, dispense rate 2500, volume 60, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:25:11.094 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:25:11.137 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:25:11.138 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:25:11.138 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:11.153 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:25:11.155 -08 000000089 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:25:11.156 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:25:11.157 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:11.158 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:25:11.158 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:11.160 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:25:11.160 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:25:11.160 -08 000000089 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:25:11.160 -08 000000089 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:25:11.180 -08 000000078 INF: FPGA: Recv ZYT 
17-02-28 20:25:11.180 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:25:11.180 -08 000000089 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:25:11.181 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:25:11.181 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:25:11.242 -08 000000105 INF: FPGA: Recv ZARM
17-02-28 20:25:11.242 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9188 ms
17-02-28 20:25:11.242 -08 000000089 INF: Z Motor: ArmAbsStepped took 82.1197 ms
17-02-28 20:25:11.243 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:11.245 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:25:11.246 -08 000000089 INF: ======================================
17-02-28 20:25:11.248 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:11.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:11.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:11.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:11.250 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:11.251 -08 000000102 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:25:11.251 -08 000000069 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:25:11.251 -08 000000102 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:25:11.251 -08 000000102 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:25:11.251 -08 000000102 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:25:11.251 -08 000000069 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:25:11.251 -08 000000102 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:25:11.251 -08 000000069 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:25:11.251 -08 000000069 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:25:11.252 -08 000000069 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:25:11.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:25:11.367 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:11.467 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:11.556 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:11.617 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:25:11.617 -08 000000089 INF: FPGA: Recv EX1MV
17-02-28 20:25:11.617 -08 000000069 INF: Excitation Filter 1: Moved -107 steps in 366.1274 ms
17-02-28 20:25:11.617 -08 000000069 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.3114 ms
17-02-28 20:25:11.617 -08 000000069 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.4129 ms
17-02-28 20:25:11.618 -08 000000102 INF: Excitation Filter 2: Moved -107 steps in 366.2844 ms
17-02-28 20:25:11.618 -08 000000102 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.6881 ms
17-02-28 20:25:11.618 -08 000000102 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.7581 ms
17-02-28 20:25:11.618 -08 000000069 INF: ======================================
17-02-28 20:25:11.618 -08 000000102 INF: ======================================
17-02-28 20:25:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:11.621 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:11.622 -08 000000074 INF: ===================Serial===================
17-02-28 20:25:11.623 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:25:11.623 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:11.623 -08 000000074 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:25:11.623 -08 000000050 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:11.623 -08 000000074 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:25:11.623 -08 000000050 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:25:11.624 -08 000000050 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:11.624 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:11.624 -08 000000060 INF: ===================Camera TDI, Parallel===================
17-02-28 20:25:11.624 -08 000000098 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:25:11.624 -08 000000098 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:25:11.625 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:25:11.625 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:25:11.626 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:11.626 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:11.627 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:11.627 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:11.681 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:25:11.681 -08 000000050 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:11.681 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:11.743 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:25:11.743 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:11.776 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:11.776 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:11.777 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:11.777 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:11.805 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:25:11.805 -08 000000050 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:11.805 -08 000000050 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:25:11.805 -08 000000050 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:25:11.806 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:11.866 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:11.867 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:25:11.867 -08 000000050 INF: Y Motor: Start the move command
17-02-28 20:25:11.867 -08 000000050 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:11.926 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:11.926 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:11.927 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:11.927 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:11.929 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:25:11.929 -08 000000050 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:25:11.929 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:11.966 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:25:12.054 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:12.056 -08 000000050 INF: Y Motor: Unshifted Position: 5934883
17-02-28 20:25:12.076 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:12.076 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:12.077 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:12.077 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:12.106 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:12.154 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:12.226 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:25:12.226 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:25:12.226 -08 000000073 INF: ===================Camera #0 Frame #1===================
17-02-28 20:25:12.227 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:25:12.227 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:25:12.227 -08 000000105 INF: ===================Camera #2 Frame #1===================
17-02-28 20:25:12.231 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:12.242 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:12.242 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Aspirating port PortB===================
17-02-28 20:25:12.342 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V1600IP11520R\r
17-02-28 20:25:12.368 -08 000000050 INF: Y Motor: Unshifted Position: 5887924
17-02-28 20:25:12.381 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:25:12.381 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:25:12.381 -08 000000073 INF: ===================Camera #0 Frame #3===================
17-02-28 20:25:12.382 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:25:12.382 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:25:12.382 -08 000000105 INF: ===================Camera #2 Frame #3===================
17-02-28 20:25:12.418 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:12.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:12.529 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:12.537 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:25:12.537 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:25:12.537 -08 000000073 INF: ===================Camera #0 Frame #4===================
17-02-28 20:25:12.538 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:25:12.538 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:25:12.538 -08 000000105 INF: ===================Camera #2 Frame #4===================
17-02-28 20:25:12.542 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:12.617 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:12.680 -08 000000050 INF: Y Motor: Unshifted Position: 5841222
17-02-28 20:25:12.690 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:12.690 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:12.690 -08 000000073 INF: ===================Camera #0 Frame #5===================
17-02-28 20:25:12.692 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:12.692 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:12.692 -08 000000105 INF: ===================Camera #2 Frame #5===================
17-02-28 20:25:12.730 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:12.740 -08 000000062 INF: FPGA: Recv ZWAIT 
17-02-28 20:25:12.740 -08 000000062 INF: FPGA: Recv TDIYWAIT
17-02-28 20:25:12.740 -08 000000074 INF: ===================Serial===================
17-02-28 20:25:12.741 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:12.742 -08 000000074 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:25:12.742 -08 000000098 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:25:12.742 -08 000000074 INF: ===================Serial===================
17-02-28 20:25:12.743 -08 000000086 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:25:12.743 -08 000000035 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:25:12.743 -08 000000086 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:25:12.744 -08 000000086 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:25:12.744 -08 000000086 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:25:12.744 -08 000000035 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:25:12.744 -08 000000086 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:25:12.744 -08 000000035 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:25:12.744 -08 000000035 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:25:12.744 -08 000000074 INF: ======================================
17-02-28 20:25:12.745 -08 000000035 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:25:12.844 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:25:12.844 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:25:12.844 -08 000000073 INF: ===================Camera #0 Frame #6===================
17-02-28 20:25:12.845 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:25:12.845 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:25:12.845 -08 000000105 INF: ===================Camera #2 Frame #6===================
17-02-28 20:25:12.847 -08 000000073 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:25:12.848 -08 000000073 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:12.849 -08 000000105 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:25:12.850 -08 000000105 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:12.855 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:12.867 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:12.887 -08 000000105 INF: Camera #2 ReleaseBuffer
17-02-28 20:25:12.887 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:25:12.888 -08 000000105 INF: ======================================
17-02-28 20:25:12.897 -08 000000073 INF: Camera #0 ReleaseBuffer
17-02-28 20:25:12.897 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:25:12.898 -08 000000073 INF: ======================================
17-02-28 20:25:12.900 -08 000000060 INF: ===================Camera TDI===================
17-02-28 20:25:12.901 -08 000000060 INF: ======================================
17-02-28 20:25:12.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:12.991 -08 000000050 INF: Y Motor: Unshifted Position: 5797056
17-02-28 20:25:13.041 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:13.115 -08 000000046 INF: FPGA: Recv EX1MV
17-02-28 20:25:13.115 -08 000000046 INF: FPGA: Recv EX2MV
17-02-28 20:25:13.115 -08 000000035 INF: Excitation Filter 2: Moved 107 steps in 371.2835 ms
17-02-28 20:25:13.115 -08 000000035 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.5025 ms
17-02-28 20:25:13.115 -08 000000035 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.5964 ms
17-02-28 20:25:13.115 -08 000000086 INF: Excitation Filter 1: Moved 107 steps in 371.4831 ms
17-02-28 20:25:13.115 -08 000000086 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8918 ms
17-02-28 20:25:13.115 -08 000000086 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9659 ms
17-02-28 20:25:13.116 -08 000000035 INF: ======================================
17-02-28 20:25:13.116 -08 000000086 INF: ======================================
17-02-28 20:25:13.117 -08 000000098 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:13.118 -08 000000098 INF: ======================================
17-02-28 20:25:13.178 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:13.179 -08 000000050 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:25:13.179 -08 000000050 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:13.179 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:13.241 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:13.242 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:25:13.242 -08 000000050 INF: Y Motor: Moved to 62.9704 after 1313 ms
17-02-28 20:25:13.242 -08 000000050 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:13.306 -08 000000050 INF: Y Motor: Recv v 4097\r
17-02-28 20:25:13.306 -08 000000050 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:13.306 -08 000000050 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:13.367 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:25:13.367 -08 000000050 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:13.367 -08 000000050 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:13.429 -08 000000050 INF: Y Motor: Recv v 134217728\r
17-02-28 20:25:13.429 -08 000000050 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:25:13.429 -08 000000050 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:13.429 -08 000000050 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:13.490 -08 000000050 INF: Y Motor: Recv v 0\r
17-02-28 20:25:13.490 -08 000000050 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:13.490 -08 000000050 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:13.490 -08 000000050 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:13.491 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:13.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:13.554 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:25:13.554 -08 000000050 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:13.554 -08 000000050 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:13.614 -08 000000050 INF: Y Motor: Recv ok\r
17-02-28 20:25:13.614 -08 000000050 INF: ======================================
17-02-28 20:25:13.615 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:13.616 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:13.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:13.617 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:25:13.676 -08 000000069 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:25:13.676 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:13.740 -08 000000051 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:25:13.741 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:25:13.802 -08 000000076 INF: FPGA: Recv ZADCR 2424
17-02-28 20:25:13.802 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:25:13.802 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:25:13.803 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:13.863 -08 000000102 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:25:13.863 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:25:13.863 -08 000000042 INF: TDIScan finished after 7032.4601 ms
17-02-28 20:25:13.863 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:25:13.863 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:25:13.864 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:25:13.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:13.926 -08 000000108 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:25:13.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:13.928 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:13.928 -08 000000060 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:25:13.928 -08 000000074 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:25:13.929 -08 000000077 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:25:13.929 -08 000000074 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:13.929 -08 000000074 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:13.929 -08 000000060 INF: ======================================
17-02-28 20:25:13.929 -08 000000077 INF: ======================================
17-02-28 20:25:13.990 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:25:13.990 -08 000000074 INF: ======================================
17-02-28 20:25:13.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:13.992 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:13.993 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:25:14.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:14.022 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:25:14.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:14.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:25:14.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:14.107 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:25:14.114 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:14.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:14.129 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:14.130 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:14.131 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:25:14.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:14.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:25:14.138 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:25:14.177 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:14.427 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:14.489 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:14.739 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:14.800 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:14.823 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:25:14.846 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0874394788207559Best Z position at top surface = -0.159096555045755Best Z position at top surface + compensator offset = -0.136396555045755 C:3,L:7,T
17-02-28 20:25:14.847 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.159096555045755
17-02-28 20:25:14.847 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.97245
17-02-28 20:25:14.847 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0874394788207559
17-02-28 20:25:14.847 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.62745
17-02-28 20:25:14.847 -08 000000042 INF: Z-height at LaneTopSurface is -0.159096555045755.
17-02-28 20:25:14.847 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:14.980 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:25:14.980 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:25:15.049 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:15.049 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Focus Point 1===================
17-02-28 20:25:15.050 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:15.051 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.051 -08 000000042 INF: Lane 7, LaneTopSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:25:15.051 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.052 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.052 -08 000000085 INF: ===================Move Tilt Motor 1===================
17-02-28 20:25:15.052 -08 000000105 INF: ===================Move Tilt Motor 3===================
17-02-28 20:25:15.053 -08 000000108 INF: ===================Move Tilt Motor 2===================
17-02-28 20:25:15.053 -08 000000085 INF: ======================================
17-02-28 20:25:15.053 -08 000000108 INF: ======================================
17-02-28 20:25:15.053 -08 000000105 INF: ======================================
17-02-28 20:25:15.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.054 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.055 -08 000000042 INF: ETF Best Z: -0.1363966 mm (35755 DAC)
17-02-28 20:25:15.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.056 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:25:15.056 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:25:15.531 -08 000000089 INF: FPGA: Recv MIOCOMPF
17-02-28 20:25:15.531 -08 000000042 INF: Compensator: Moved IntoPath in 475 ms
17-02-28 20:25:15.532 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:15.532 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.533 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:15.539 -08 000000042 INF: Swath 1 position calculated to be: {X=85.22163, Y=39.76308} from estimated center X= 85.73699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:25:15.539 -08 000000042 INF: Swath 2 position calculated to be: {X=86.32964, Y=39.76308} from estimated center X= 85.73699, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:25:15.545 -08 000000042 INF: Swath 0: Converted transform from (-29.46064, 2.020614) pixels to (-0.010005, 0.00069) mm.
17-02-28 20:25:15.551 -08 000000042 INF: Swath 1: Converted transform from (-45.38751, 1.910159) pixels to (-0.015525, 0.00069) mm.
17-02-28 20:25:15.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:25:15.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:25:15.552 -08 000000042 INF: Transformed XStagePosition from 85.22163 mm to 85.2116289110854 mm.
17-02-28 20:25:15.563 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5537793554841 mm.
17-02-28 20:25:15.563 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3537793554841 mm.
17-02-28 20:25:15.563 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4445293554841 mm.
17-02-28 20:25:15.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:15.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:25:15.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:15.565 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:25:15.573 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:15.574 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:15.575 -08 000000076 INF: ===================MoveEmissionFilters===================
17-02-28 20:25:15.575 -08 000000082 INF: ===================Move X,Y===================
17-02-28 20:25:15.575 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:15.575 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:15.576 -08 000000082 INF: ===================Move X,Y, Parallel===================
17-02-28 20:25:15.576 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:15.576 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:15.576 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:25:15.576 -08 000000066 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:15.576 -08 000000098 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:25:15.576 -08 000000098 INF: Z Motor: Moving to -0.1564 mm, started at -0.0100 mm
17-02-28 20:25:15.576 -08 000000098 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:25:15.576 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:15.576 -08 000000091 INF: ===================Move X Motor without settling===================
17-02-28 20:25:15.576 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:15.577 -08 000000091 INF: X Motor: Xmit PR VM\n
17-02-28 20:25:15.577 -08 000000066 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:15.577 -08 000000051 INF: Y Motor: Moving to 64.5538 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:25:15.577 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:15.577 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:15.577 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:15.577 -08 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:25:15.577 -08 000000072 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:25:15.577 -08 000000072 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:25:15.577 -08 000000086 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:25:15.578 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:25:15.578 -08 000000090 INF: ======================================
17-02-28 20:25:15.578 -08 000000050 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:25:15.578 -08 000000072 INF: ======================================
17-02-28 20:25:15.578 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:25:15.578 -08 000000086 INF: ======================================
17-02-28 20:25:15.578 -08 000000078 INF: ======================================
17-02-28 20:25:15.578 -08 000000050 INF: ======================================
17-02-28 20:25:15.579 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:15.579 -08 000000077 INF: ======================================
17-02-28 20:25:15.579 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:15.580 -08 000000100 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:15.580 -08 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:25:15.580 -08 000000073 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:25:15.580 -08 000000108 INF: ======================================
17-02-28 20:25:15.580 -08 000000066 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:15.580 -08 000000078 INF: ======================================
17-02-28 20:25:15.581 -08 000000073 INF: ======================================
17-02-28 20:25:15.581 -08 000000100 INF: ======================================
17-02-28 20:25:15.581 -08 000000066 INF: ======================================
17-02-28 20:25:15.582 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:15.583 -08 000000105 INF: ======================================
17-02-28 20:25:15.584 -08 000000076 INF: ======================================
17-02-28 20:25:15.593 -08 000000059 INF: FPGA: Recv ZTRG 
17-02-28 20:25:15.593 -08 000000098 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:25:15.657 -08 000000073 INF: FPGA: Recv ZYT 
17-02-28 20:25:15.657 -08 000000098 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:25:15.657 -08 000000098 INF: FPGA: Xmit ZMV 40998\n
17-02-28 20:25:15.659 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:25:15.659 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:15.659 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:15.659 -08 000000091 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:25:15.659 -08 000000091 INF: X Motor: Xmit PR VI\n
17-02-28 20:25:15.720 -08 000000059 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:25:15.720 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:25:15.721 -08 000000091 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:25:15.721 -08 000000091 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:25:15.721 -08 000000091 INF: X Motor: Moving to 85.2116 mm @15.000 mm/sec, started at 85.7749 mm
17-02-28 20:25:15.721 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:25:15.721 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:15.721 -08 000000091 INF: X Motor: Xmit MA 10736\n
17-02-28 20:25:15.782 -08 000000091 INF: X Motor: Recv MA 10736\r\n>
17-02-28 20:25:15.782 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:25:15.782 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:15.782 -08 000000091 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:25:15.782 -08 000000051 INF: Y Motor: Set target position to 5955378 encoder counts
17-02-28 20:25:15.782 -08 000000051 INF: Y Motor: Xmit s r0xca 5955378\r
17-02-28 20:25:15.782 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:15.845 -08 000000086 INF: FPGA: Recv ZMV 
17-02-28 20:25:15.845 -08 000000098 INF: Z Motor: MoveAndTrigger 'ZMV' command took 187.8078 ms
17-02-28 20:25:15.845 -08 000000098 INF: FPGA: Xmit ZDACR\n
17-02-28 20:25:15.846 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:15.847 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:25:15.847 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:25:15.847 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:15.908 -08 000000083 INF: FPGA: Recv ZDACR 40998
17-02-28 20:25:15.909 -08 000000098 INF: Z Motor: MoveAndTrigger took 332.6389 ms w/comms
17-02-28 20:25:15.909 -08 000000098 INF: Z Motor: After move to -0.1564, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:15.909 -08 000000098 INF: Z Motor: MoveAbsStepped took 332.8385 ms
17-02-28 20:25:15.909 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:15.910 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:25:15.910 -08 000000051 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:25:15.910 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:15.911 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:25:15.911 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:25:15.911 -08 000000109 INF: ===================Camera Arm TDI===================
17-02-28 20:25:15.912 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:15.912 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:15.913 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:25:15.913 -08 000000109 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:15.913 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:15.914 -08 000000072 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:25:15.968 -08 000000046 INF: FPGA: Recv ZSEL 
17-02-28 20:25:15.969 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:15.969 -08 000000072 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:25:16.030 -08 000000076 INF: FPGA: Recv TDIBB
17-02-28 20:25:16.030 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:16.031 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:25:16.032 -08 000000051 INF: Y Motor: Unshifted Position: 5877258
17-02-28 20:25:16.032 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:16.033 -08 000000072 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:25:16.033 -08 000000072 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:25:16.033 -08 000000072 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:25:16.082 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:16.092 -08 000000069 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:16.092 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:16.094 -08 000000072 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:25:16.094 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:16.096 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:16.096 -08 000000072 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:25:16.096 -08 000000072 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:25:16.096 -08 000000072 INF: Z Motor: Arming to move to -0.1164 mm
17-02-28 20:25:16.096 -08 000000072 INF: FPGA: Xmit ZYT 6435378 4\n
17-02-28 20:25:16.157 -08 000000035 INF: FPGA: Recv ZYT 
17-02-28 20:25:16.157 -08 000000072 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6377258 enc / 63.773 mm / ) = 6435378 enc / 64.354 mm
17-02-28 20:25:16.157 -08 000000072 INF: FPGA: Xmit ZARM 30512\n
17-02-28 20:25:16.160 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:16.209 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:16.217 -08 000000099 INF: FPGA: Recv ZARM
17-02-28 20:25:16.217 -08 000000072 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.8815 ms
17-02-28 20:25:16.217 -08 000000072 INF: Z Motor: ArmAbsStepped took 120.8605 ms
17-02-28 20:25:16.217 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:16.218 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:25:16.219 -08 000000091 INF: X Motor: Xmit PR ER\n
17-02-28 20:25:16.220 -08 000000072 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:25:16.220 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:25:16.222 -08 000000072 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:25:16.222 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:25:16.223 -08 000000072 INF: ======================================
17-02-28 20:25:16.284 -08 000000091 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:25:16.284 -08 000000091 INF: X Motor: Moved to 85.2109 after 502 ms
17-02-28 20:25:16.284 -08 000000091 INF: ======================================
17-02-28 20:25:16.345 -08 000000051 INF: Y Motor: Unshifted Position: 5955378
17-02-28 20:25:16.345 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:16.345 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:16.408 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:25:16.408 -08 000000051 INF: Y Motor: Moved to 64.5538 after 497 ms
17-02-28 20:25:16.408 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:16.411 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:16.471 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:16.472 -08 000000051 INF: Y Motor: Recv v 4096\r
17-02-28 20:25:16.472 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:16.472 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:16.533 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:25:16.533 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:16.533 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:16.595 -08 000000051 INF: Y Motor: Recv v 402653184\r
17-02-28 20:25:16.595 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:25:16.595 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:16.595 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:16.659 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:25:16.659 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:16.659 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:16.659 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:16.721 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:25:16.721 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:16.721 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:16.721 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:16.783 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:16.784 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:25:16.784 -08 000000051 INF: ======================================
17-02-28 20:25:16.785 -08 000000082 INF: ===================Move X,Y===================
17-02-28 20:25:16.786 -08 000000082 INF: ======================================
17-02-28 20:25:16.877 -08 000000109 INF: Camera #0 AttachBuffer (imageDataPtr = 56915988528 imgPtr = 56915988528 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:25:16.877 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:25:16.878 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:16.894 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:16.896 -08 000000109 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:17.033 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:17.093 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:17.343 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:17.407 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:17.657 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:17.718 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:17.958 -08 000000109 INF: Camera #2 AttachBuffer (imageDataPtr = 58727927856 imgPtr = 59633897520 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:25:17.958 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:25:17.958 -08 000000109 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:17.968 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:17.974 -08 000000109 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:17.976 -08 000000109 INF: ===================Camera Arm TDI===================
17-02-28 20:25:17.977 -08 000000109 INF: ======================================
17-02-28 20:25:17.978 -08 000000098 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:17.979 -08 000000098 INF: ======================================
17-02-28 20:25:17.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:17.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:17.981 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:25:17.981 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:25:18.031 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:18.032 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:18.032 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:25:18.091 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:25:18.091 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:25:18.091 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:18.092 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:18.153 -08 000000050 INF: FPGA: Recv TDIYERD 6455378
17-02-28 20:25:18.153 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455378 counts (64.554 mm)
17-02-28 20:25:18.153 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:18.154 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:18.154 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:25:18.155 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:25:18.155 -08 000000052 INF: ======================================
17-02-28 20:25:18.155 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:18.156 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:25:18.156 -08 000000098 INF: FPGA: Xmit TDIYPOS 6344453\n
17-02-28 20:25:18.215 -08 000000072 INF: FPGA: Recv TDIYPOS
17-02-28 20:25:18.215 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:18.216 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:25:18.217 -08 000000098 INF: FPGA: Xmit TDIYARM3 139264 6435378 1 1\n
17-02-28 20:25:18.279 -08 000000050 INF: FPGA: Recv TDIYARM3
17-02-28 20:25:18.279 -08 000000098 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:18.280 -08 000000098 INF: ===================TDI FPGA Arm===================
17-02-28 20:25:18.281 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:18.281 -08 000000098 INF: ======================================
17-02-28 20:25:18.282 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:18.283 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:18.283 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:18.283 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:18.284 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:18.285 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:25:18.285 -08 000000102 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:25:18.285 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:25:18.285 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:25:18.285 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:25:18.285 -08 000000102 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:25:18.285 -08 000000102 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:25:18.285 -08 000000102 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:25:18.285 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:25:18.286 -08 000000102 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:25:18.342 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:18.592 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:18.653 -08 000000033 INF: FPGA: Recv EX2MV
17-02-28 20:25:18.653 -08 000000033 INF: FPGA: Recv EX1MV
17-02-28 20:25:18.653 -08 000000102 INF: Excitation Filter 1: Moved -107 steps in 368.1567 ms
17-02-28 20:25:18.653 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 368.2936 ms
17-02-28 20:25:18.653 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4437 ms
17-02-28 20:25:18.653 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.522 ms
17-02-28 20:25:18.653 -08 000000102 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.2632 ms
17-02-28 20:25:18.654 -08 000000102 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6433 ms
17-02-28 20:25:18.654 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:18.654 -08 000000039 INF: ======================================
17-02-28 20:25:18.654 -08 000000102 INF: ======================================
17-02-28 20:25:18.655 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:18.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:18.657 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:25:18.657 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:18.657 -08 000000078 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:18.657 -08 000000078 INF: Y Motor: Moving to 14.9054 mm @6.500 mm/sec, started at 64.5538 mm
17-02-28 20:25:18.657 -08 000000108 INF: ===================FPGA Z Wait===================
17-02-28 20:25:18.657 -08 000000078 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:18.658 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:18.658 -08 000000108 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:25:18.658 -08 000000083 INF: ===================Camera TDI, Parallel===================
17-02-28 20:25:18.658 -08 000000073 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:25:18.658 -08 000000059 INF: ===================Camera TDI===================
17-02-28 20:25:18.659 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:25:18.659 -08 000000073 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:25:18.660 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:18.660 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:18.661 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:18.661 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:18.716 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:25:18.716 -08 000000078 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:18.716 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:18.781 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:25:18.781 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:18.810 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:18.810 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:18.811 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:18.811 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:18.844 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:25:18.844 -08 000000078 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:18.844 -08 000000078 INF: Y Motor: Set target position to 990544 encoder counts
17-02-28 20:25:18.844 -08 000000078 INF: Y Motor: Xmit s r0xca 990544\r
17-02-28 20:25:18.904 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:25:18.904 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:18.904 -08 000000078 INF: Y Motor: Start the move command
17-02-28 20:25:18.904 -08 000000078 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:18.960 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:18.960 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:18.961 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:18.961 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:18.967 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:18.969 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:25:18.969 -08 000000078 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:25:18.969 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.028 -08 000000109 INF: FPGA: Recv ZWAIT 
17-02-28 20:25:19.028 -08 000000108 INF: ======================================
17-02-28 20:25:19.092 -08 000000078 INF: Y Motor: Unshifted Position: 5892226
17-02-28 20:25:19.110 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:19.110 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:19.110 -08 000000059 INF: ===================Camera #0 Frame #5===================
17-02-28 20:25:19.111 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:19.111 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:19.111 -08 000000086 INF: ===================Camera #2 Frame #5===================
17-02-28 20:25:19.142 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.217 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:19.269 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.276 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:25:19.276 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:25:19.276 -08 000000059 INF: ===================Camera #0 Frame #11===================
17-02-28 20:25:19.278 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:19.278 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:25:19.278 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:25:19.278 -08 000000086 INF: ===================Camera #2 Frame #11===================
17-02-28 20:25:19.402 -08 000000078 INF: Y Motor: Unshifted Position: 5689209
17-02-28 20:25:19.446 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:25:19.446 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:25:19.446 -08 000000059 INF: ===================Camera #0 Frame #17===================
17-02-28 20:25:19.449 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:25:19.449 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:25:19.449 -08 000000086 INF: ===================Camera #2 Frame #17===================
17-02-28 20:25:19.452 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.528 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:19.579 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.591 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:19.616 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:25:19.616 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:25:19.616 -08 000000059 INF: ===================Camera #0 Frame #23===================
17-02-28 20:25:19.619 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:25:19.619 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:25:19.619 -08 000000086 INF: ===================Camera #2 Frame #23===================
17-02-28 20:25:19.716 -08 000000078 INF: Y Motor: Unshifted Position: 5486420
17-02-28 20:25:19.766 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.786 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:25:19.786 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:25:19.786 -08 000000059 INF: ===================Camera #0 Frame #29===================
17-02-28 20:25:19.789 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:25:19.789 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:25:19.789 -08 000000086 INF: ===================Camera #2 Frame #30===================
17-02-28 20:25:19.841 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:19.890 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:19.901 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:19.955 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:25:19.955 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:25:19.955 -08 000000059 INF: ===================Camera #0 Frame #36===================
17-02-28 20:25:19.963 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:25:19.963 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:25:19.963 -08 000000086 INF: ===================Camera #2 Frame #36===================
17-02-28 20:25:20.028 -08 000000078 INF: Y Motor: Unshifted Position: 5284693
17-02-28 20:25:20.078 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:20.128 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:25:20.128 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:25:20.128 -08 000000059 INF: ===================Camera #0 Frame #42===================
17-02-28 20:25:20.133 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:25:20.133 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:25:20.133 -08 000000086 INF: ===================Camera #2 Frame #42===================
17-02-28 20:25:20.151 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:20.201 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:20.215 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:20.298 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:25:20.298 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:25:20.298 -08 000000059 INF: ===================Camera #0 Frame #48===================
17-02-28 20:25:20.304 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:25:20.304 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:25:20.304 -08 000000086 INF: ===================Camera #2 Frame #49===================
17-02-28 20:25:20.339 -08 000000078 INF: Y Motor: Unshifted Position: 5081240
17-02-28 20:25:20.389 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:20.465 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:20.468 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:25:20.468 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:25:20.468 -08 000000059 INF: ===================Camera #0 Frame #55===================
17-02-28 20:25:20.478 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:25:20.478 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:25:20.478 -08 000000086 INF: ===================Camera #2 Frame #55===================
17-02-28 20:25:20.515 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:20.526 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:20.526 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:20.526 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:20.527 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:25:20.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Delay 5 of 5 seconds left===================
17-02-28 20:25:20.641 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:25:20.641 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:25:20.641 -08 000000059 INF: ===================Camera #0 Frame #61===================
17-02-28 20:25:20.649 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:25:20.649 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:25:20.649 -08 000000086 INF: ===================Camera #2 Frame #61===================
17-02-28 20:25:20.652 -08 000000078 INF: Y Motor: Unshifted Position: 4877574
17-02-28 20:25:20.702 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:20.810 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:25:20.810 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:25:20.810 -08 000000059 INF: ===================Camera #0 Frame #67===================
17-02-28 20:25:20.819 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:25:20.819 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:25:20.819 -08 000000086 INF: ===================Camera #2 Frame #67===================
17-02-28 20:25:20.826 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:20.962 -08 000000078 INF: Y Motor: Unshifted Position: 4675856
17-02-28 20:25:20.980 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:25:20.980 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:25:20.980 -08 000000059 INF: ===================Camera #0 Frame #73===================
17-02-28 20:25:20.990 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:25:20.990 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:25:20.990 -08 000000086 INF: ===================Camera #2 Frame #74===================
17-02-28 20:25:21.012 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:21.139 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:21.150 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:25:21.150 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:25:21.150 -08 000000059 INF: ===================Camera #0 Frame #80===================
17-02-28 20:25:21.164 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:25:21.164 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:25:21.164 -08 000000086 INF: ===================Camera #2 Frame #80===================
17-02-28 20:25:21.274 -08 000000078 INF: Y Motor: Unshifted Position: 4473048
17-02-28 20:25:21.323 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:25:21.323 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:25:21.323 -08 000000059 INF: ===================Camera #0 Frame #86===================
17-02-28 20:25:21.324 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:21.335 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:25:21.335 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:25:21.335 -08 000000086 INF: ===================Camera #2 Frame #86===================
17-02-28 20:25:21.451 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:21.493 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:25:21.493 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:25:21.493 -08 000000059 INF: ===================Camera #0 Frame #92===================
17-02-28 20:25:21.506 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:25:21.506 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:25:21.506 -08 000000086 INF: ===================Camera #2 Frame #93===================
17-02-28 20:25:21.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:21.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Delay 4 of 5 seconds left===================
17-02-28 20:25:21.589 -08 000000078 INF: Y Motor: Unshifted Position: 4269595
17-02-28 20:25:21.639 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:21.663 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:25:21.663 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:25:21.663 -08 000000059 INF: ===================Camera #0 Frame #99===================
17-02-28 20:25:21.680 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:25:21.680 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:25:21.680 -08 000000086 INF: ===================Camera #2 Frame #99===================
17-02-28 20:25:21.761 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:21.836 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:25:21.836 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:25:21.836 -08 000000059 INF: ===================Camera #0 Frame #105===================
17-02-28 20:25:21.851 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:25:21.851 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:25:21.854 -08 000000086 INF: ===================Camera #2 Frame #105===================
17-02-28 20:25:21.900 -08 000000078 INF: Y Motor: Unshifted Position: 4064627
17-02-28 20:25:21.950 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:22.006 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:25:22.006 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:25:22.006 -08 000000059 INF: ===================Camera #0 Frame #111===================
17-02-28 20:25:22.024 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:25:22.024 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:25:22.024 -08 000000086 INF: ===================Camera #2 Frame #112===================
17-02-28 20:25:22.074 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:22.176 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:25:22.176 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:25:22.176 -08 000000059 INF: ===================Camera #0 Frame #117===================
17-02-28 20:25:22.198 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:25:22.198 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:25:22.198 -08 000000086 INF: ===================Camera #2 Frame #118===================
17-02-28 20:25:22.210 -08 000000078 INF: Y Motor: Unshifted Position: 3864214
17-02-28 20:25:22.260 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:22.346 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:25:22.346 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:25:22.346 -08 000000059 INF: ===================Camera #0 Frame #124===================
17-02-28 20:25:22.369 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:25:22.369 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:25:22.369 -08 000000086 INF: ===================Camera #2 Frame #125===================
17-02-28 20:25:22.387 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:22.519 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:25:22.519 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:25:22.519 -08 000000059 INF: ===================Camera #0 Frame #130===================
17-02-28 20:25:22.523 -08 000000078 INF: Y Motor: Unshifted Position: 3660757
17-02-28 20:25:22.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:22.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Delay 3 of 5 seconds left===================
17-02-28 20:25:22.543 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:25:22.543 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:25:22.543 -08 000000086 INF: ===================Camera #2 Frame #131===================
17-02-28 20:25:22.573 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:22.688 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:25:22.688 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:25:22.688 -08 000000059 INF: ===================Camera #0 Frame #136===================
17-02-28 20:25:22.697 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:22.714 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:25:22.714 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:25:22.714 -08 000000086 INF: ===================Camera #2 Frame #137===================
17-02-28 20:25:22.836 -08 000000078 INF: Y Motor: Unshifted Position: 3457316
17-02-28 20:25:22.858 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:25:22.858 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:25:22.858 -08 000000059 INF: ===================Camera #0 Frame #143===================
17-02-28 20:25:22.884 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:25:22.884 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:25:22.884 -08 000000086 INF: ===================Camera #2 Frame #144===================
17-02-28 20:25:22.886 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.010 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.031 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:25:23.031 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:25:23.031 -08 000000059 INF: ===================Camera #0 Frame #149===================
17-02-28 20:25:23.058 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:25:23.058 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:25:23.058 -08 000000086 INF: ===================Camera #2 Frame #150===================
17-02-28 20:25:23.146 -08 000000078 INF: Y Motor: Unshifted Position: 3254300
17-02-28 20:25:23.196 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.201 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:25:23.201 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:25:23.201 -08 000000059 INF: ===================Camera #0 Frame #155===================
17-02-28 20:25:23.229 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:25:23.229 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:25:23.229 -08 000000086 INF: ===================Camera #2 Frame #156===================
17-02-28 20:25:23.323 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.371 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:25:23.371 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:25:23.371 -08 000000059 INF: ===================Camera #0 Frame #161===================
17-02-28 20:25:23.399 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:25:23.399 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:25:23.399 -08 000000086 INF: ===================Camera #2 Frame #162===================
17-02-28 20:25:23.460 -08 000000078 INF: Y Motor: Unshifted Position: 3051934
17-02-28 20:25:23.510 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:23.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Delay 2 of 5 seconds left===================
17-02-28 20:25:23.541 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:25:23.541 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:25:23.541 -08 000000059 INF: ===================Camera #0 Frame #168===================
17-02-28 20:25:23.570 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:25:23.570 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:25:23.570 -08 000000086 INF: ===================Camera #2 Frame #169===================
17-02-28 20:25:23.633 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.714 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:25:23.714 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:25:23.714 -08 000000059 INF: ===================Camera #0 Frame #174===================
17-02-28 20:25:23.744 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:25:23.744 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:25:23.744 -08 000000086 INF: ===================Camera #2 Frame #175===================
17-02-28 20:25:23.771 -08 000000078 INF: Y Motor: Unshifted Position: 2847836
17-02-28 20:25:23.821 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:23.884 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:25:23.884 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:25:23.884 -08 000000059 INF: ===================Camera #0 Frame #180===================
17-02-28 20:25:23.915 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:25:23.915 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:25:23.915 -08 000000086 INF: ===================Camera #2 Frame #181===================
17-02-28 20:25:23.947 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.054 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:25:24.054 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:25:24.054 -08 000000059 INF: ===================Camera #0 Frame #187===================
17-02-28 20:25:24.083 -08 000000078 INF: Y Motor: Unshifted Position: 2646128
17-02-28 20:25:24.086 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:25:24.086 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:25:24.086 -08 000000086 INF: ===================Camera #2 Frame #188===================
17-02-28 20:25:24.133 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.226 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:25:24.226 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:25:24.226 -08 000000059 INF: ===================Camera #0 Frame #193===================
17-02-28 20:25:24.257 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.259 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:25:24.259 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:25:24.259 -08 000000086 INF: ===================Camera #2 Frame #194===================
17-02-28 20:25:24.394 -08 000000078 INF: Y Motor: Unshifted Position: 2442031
17-02-28 20:25:24.396 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:25:24.396 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:25:24.396 -08 000000059 INF: ===================Camera #0 Frame #199===================
17-02-28 20:25:24.430 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:25:24.430 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:25:24.430 -08 000000086 INF: ===================Camera #2 Frame #200===================
17-02-28 20:25:24.444 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:24.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Delay 1 of 5 seconds left===================
17-02-28 20:25:24.564 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:25:24.564 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:25:24.564 -08 000000059 INF: ===================Camera #0 Frame #205===================
17-02-28 20:25:24.571 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.601 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:25:24.601 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:25:24.601 -08 000000086 INF: ===================Camera #2 Frame #207===================
17-02-28 20:25:24.707 -08 000000078 INF: Y Motor: Unshifted Position: 2240527
17-02-28 20:25:24.734 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:25:24.734 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:25:24.734 -08 000000059 INF: ===================Camera #0 Frame #212===================
17-02-28 20:25:24.757 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.776 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:25:24.776 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:25:24.776 -08 000000086 INF: ===================Camera #2 Frame #213===================
17-02-28 20:25:24.882 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:24.907 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:25:24.907 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:25:24.907 -08 000000059 INF: ===================Camera #0 Frame #218===================
17-02-28 20:25:24.945 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:25:24.945 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:25:24.945 -08 000000086 INF: ===================Camera #2 Frame #219===================
17-02-28 20:25:25.018 -08 000000078 INF: Y Motor: Unshifted Position: 2036213
17-02-28 20:25:25.068 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:25.075 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:25:25.075 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:25:25.075 -08 000000059 INF: ===================Camera #0 Frame #224===================
17-02-28 20:25:25.116 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:25:25.116 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:25:25.116 -08 000000086 INF: ===================Camera #2 Frame #226===================
17-02-28 20:25:25.195 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:25.245 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:25:25.245 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:25:25.245 -08 000000059 INF: ===================Camera #0 Frame #230===================
17-02-28 20:25:25.289 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:25:25.289 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:25:25.289 -08 000000086 INF: ===================Camera #2 Frame #232===================
17-02-28 20:25:25.330 -08 000000078 INF: Y Motor: Unshifted Position: 1835141
17-02-28 20:25:25.380 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:25.413 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:25:25.413 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:25:25.413 -08 000000059 INF: ===================Camera #0 Frame #237===================
17-02-28 20:25:25.458 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:25:25.458 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:25:25.458 -08 000000086 INF: ===================Camera #2 Frame #238===================
17-02-28 20:25:25.507 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:25.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:25.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:25.527 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:25:25.527 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:25.586 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:25:25.586 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:25:25.586 -08 000000059 INF: ===================Camera #0 Frame #243===================
17-02-28 20:25:25.626 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:25:25.629 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:25:25.629 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:25:25.629 -08 000000086 INF: ===================Camera #2 Frame #245===================
17-02-28 20:25:25.643 -08 000000078 INF: Y Motor: Unshifted Position: 1631684
17-02-28 20:25:25.693 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:25.704 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:25:25.704 -08 000000018 INF: Current Position of Pump is: 11520
17-02-28 20:25:25.756 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:25:25.756 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:25:25.756 -08 000000059 INF: ===================Camera #0 Frame #249===================
17-02-28 20:25:25.803 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:25:25.803 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:25:25.803 -08 000000086 INF: ===================Camera #2 Frame #251===================
17-02-28 20:25:25.804 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:25:25.819 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:25.895 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`11520 (0x03)\r\n(0xFF)
17-02-28 20:25:25.895 -08 000000018 INF: Current Position of Pump is: 11520
17-02-28 20:25:25.895 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Dispensing port PortC===================
17-02-28 20:25:25.924 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:25:25.924 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:25:25.924 -08 000000059 INF: ===================Camera #0 Frame #255===================
17-02-28 20:25:25.954 -08 000000078 INF: Y Motor: Unshifted Position: 1427586
17-02-28 20:25:25.974 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:25:25.974 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:25:25.974 -08 000000086 INF: ===================Camera #2 Frame #257===================
17-02-28 20:25:25.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD11520R\r
17-02-28 20:25:26.004 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:26.080 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:26.094 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:25:26.094 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:25:26.094 -08 000000059 INF: ===================Camera #0 Frame #262===================
17-02-28 20:25:26.131 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:26.145 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:25:26.145 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:25:26.145 -08 000000086 INF: ===================Camera #2 Frame #264===================
17-02-28 20:25:26.180 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:26.267 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:26.267 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:25:26.267 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:25:26.267 -08 000000059 INF: ===================Camera #0 Frame #268===================
17-02-28 20:25:26.268 -08 000000078 INF: Y Motor: Unshifted Position: 1225212
17-02-28 20:25:26.319 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:26.320 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:25:26.320 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:25:26.320 -08 000000086 INF: ===================Camera #2 Frame #270===================
17-02-28 20:25:26.391 -08 000000077 INF: FPGA: Recv TDIYWAIT
17-02-28 20:25:26.391 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:26.393 -08 000000073 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:25:26.393 -08 000000050 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:25:26.394 -08 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:25:26.394 -08 000000050 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:25:26.394 -08 000000050 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:25:26.394 -08 000000050 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:25:26.394 -08 000000050 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:25:26.394 -08 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:25:26.394 -08 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:25:26.394 -08 000000033 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:25:26.395 -08 000000033 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:25:26.438 -08 000000059 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:25:26.438 -08 000000059 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:25:26.438 -08 000000059 INF: ===================Camera #0 Frame #272===================
17-02-28 20:25:26.443 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:26.451 -08 000000059 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:25:26.452 -08 000000059 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:26.518 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:26.578 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:26.579 -08 000000078 INF: Y Motor: Unshifted Position: 1023496
17-02-28 20:25:26.616 -08 000000059 INF: Camera #0 ReleaseBuffer
17-02-28 20:25:26.616 -08 000000086 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:25:26.616 -08 000000086 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:25:26.616 -08 000000086 INF: ===================Camera #2 Frame #272===================
17-02-28 20:25:26.616 -08 000000059 INF: ===================Camera TDI===================
17-02-28 20:25:26.623 -08 000000086 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:25:26.624 -08 000000086 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:26.629 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:26.647 -08 000000059 INF: ======================================
17-02-28 20:25:26.766 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:25:26.766 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:25:26.766 -08 000000033 INF: Excitation Filter 2: Moved 107 steps in 371.9697 ms
17-02-28 20:25:26.766 -08 000000050 INF: Excitation Filter 1: Moved 107 steps in 372.1891 ms
17-02-28 20:25:26.766 -08 000000050 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3195 ms
17-02-28 20:25:26.766 -08 000000050 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.4252 ms
17-02-28 20:25:26.766 -08 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1142 ms
17-02-28 20:25:26.766 -08 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.5331 ms
17-02-28 20:25:26.766 -08 000000050 INF: ======================================
17-02-28 20:25:26.767 -08 000000033 INF: ======================================
17-02-28 20:25:26.768 -08 000000078 INF: Y Motor: Unshifted Position: 990543
17-02-28 20:25:26.768 -08 000000078 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:26.768 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:26.768 -08 000000073 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:26.769 -08 000000073 INF: ======================================
17-02-28 20:25:26.782 -08 000000045 INF: RunCopyService queue size at 2/28/2017 8:25:26 PM is 2
17-02-28 20:25:26.823 -08 000000086 INF: Camera #2 ReleaseBuffer
17-02-28 20:25:26.823 -08 000000086 INF: ===================Camera TDI===================
17-02-28 20:25:26.828 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:26.830 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:25:26.830 -08 000000078 INF: Y Motor: Moved to 14.9054 after 7860 ms
17-02-28 20:25:26.830 -08 000000078 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:26.863 -08 000000086 INF: ======================================
17-02-28 20:25:26.865 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:25:26.866 -08 000000083 INF: ======================================
17-02-28 20:25:26.892 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:26.894 -08 000000078 INF: Y Motor: Recv v 4097\r
17-02-28 20:25:26.894 -08 000000078 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:26.894 -08 000000078 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:26.953 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:25:26.953 -08 000000078 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:26.953 -08 000000078 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:27.018 -08 000000078 INF: Y Motor: Recv v 134217728\r
17-02-28 20:25:27.018 -08 000000078 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:25:27.018 -08 000000078 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:27.018 -08 000000078 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:27.080 -08 000000078 INF: Y Motor: Recv v 0\r
17-02-28 20:25:27.080 -08 000000078 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:27.080 -08 000000078 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:27.080 -08 000000078 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:27.142 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:25:27.142 -08 000000078 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:27.142 -08 000000078 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:27.142 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:27.203 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:27.204 -08 000000078 INF: Y Motor: Recv ok\r
17-02-28 20:25:27.204 -08 000000078 INF: ======================================
17-02-28 20:25:27.205 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:27.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:27.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.207 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:25:27.265 -08 000000099 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:25:27.265 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:27.327 -08 000000074 INF: FPGA: Recv TDIYERD 1490544
17-02-28 20:25:27.327 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:25:27.389 -08 000000087 INF: FPGA: Recv ZADCR 35616
17-02-28 20:25:27.389 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.136. Y moved -48.539 mm
17-02-28 20:25:27.389 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:25:27.451 -08 000000083 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:25:27.451 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:25:27.451 -08 000000042 INF: TDIScan finished after 11898.028 ms
17-02-28 20:25:27.451 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:25:27.451 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:25:27.453 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:27.453 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.485 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.692 um
17-02-28 20:25:27.485 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.486 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:25:27.513 -08 000000033 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:25:27.514 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:27.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.514 -08 000000076 INF: ===================Dither Clean Up Command===================
17-02-28 20:25:27.514 -08 000000066 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:25:27.514 -08 000000090 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:25:27.514 -08 000000059 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:25:27.515 -08 000000059 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:25:27.515 -08 000000066 INF: ======================================
17-02-28 20:25:27.515 -08 000000059 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:25:27.515 -08 000000090 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:27.515 -08 000000090 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:27.515 -08 000000091 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:25:27.515 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:27.516 -08 000000091 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:25:27.518 -08 000000089 INF: ===================LFT:Extracting coords===================
17-02-28 20:25:27.544 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:27.544 -08 000000089 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:25:27.545 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.545 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.545 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.545 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.545 -08 000000037 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:27.546 -08 000000100 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:27.546 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:27.546 -08 000000046 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:27.575 -08 000000085 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:27.575 -08 000000085 INF: FPGA: Recv ZSEL 
17-02-28 20:25:27.575 -08 000000091 INF: FPGA: Xmit ZDACW 40998\n
17-02-28 20:25:27.575 -08 000000059 INF: ======================================
17-02-28 20:25:27.577 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:25:27.577 -08 000000090 INF: ======================================
17-02-28 20:25:27.623 -08 000000037 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:27.623 -08 000000100 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:27.623 -08 000000083 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:27.623 -08 000000046 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:27.640 -08 000000069 INF: FPGA: Recv ZDACW 
17-02-28 20:25:27.641 -08 000000091 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:25:27.641 -08 000000091 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:25:27.702 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:25:27.702 -08 000000091 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:25:27.704 -08 000000091 INF: ======================================
17-02-28 20:25:27.764 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:27.775 -08 000000037 INF: LFT found best fwhm score 2.000059 in 152 ms
17-02-28 20:25:27.775 -08 000000037 INF: LFT found good score at index 8409 with fwhm value 2.000059. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:7,T
17-02-28 20:25:27.776 -08 000000100 INF: LFT found best fwhm score 2.000061 in 152 ms
17-02-28 20:25:27.776 -08 000000100 INF: LFT found good score at index 833 with fwhm value 2.000061. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:7,T
17-02-28 20:25:27.776 -08 000000037 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.776 -08 000000083 INF: LFT found best fwhm score 2.000083 in 153 ms
17-02-28 20:25:27.776 -08 000000083 INF: LFT found good score at index 7469 with fwhm value 2.000083. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:7,T
17-02-28 20:25:27.776 -08 000000046 INF: LFT found best fwhm score 2.096818 in 153 ms
17-02-28 20:25:27.776 -08 000000046 INF: LFT found good score at index 2929 with fwhm value 2.096818. Next cycle, cycle 4 starting Z position for top surface is at -0.157 mm FC:B, C:3,L:7,T
17-02-28 20:25:27.776 -08 000000037 INF: ======================================
17-02-28 20:25:27.776 -08 000000046 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.776 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.776 -08 000000046 INF: ======================================
17-02-28 20:25:27.777 -08 000000083 INF: ======================================
17-02-28 20:25:27.777 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:25:27.777 -08 000000100 INF: ======================================
17-02-28 20:25:27.778 -08 000000089 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:27.779 -08 000000089 INF: LFT weighted average best Z for top surface is at -0.157mm FC:B, C:3,L:7,T
17-02-28 20:25:27.780 -08 000000089 INF: ======================================
17-02-28 20:25:27.781 -08 000000076 INF: ======================================
17-02-28 20:25:27.782 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.782 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:25:27.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:25:27.784 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:25:27.785 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Dispensing port PortC, Waiting for image analysis===================
17-02-28 20:25:27.785 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5), Dispensing port PortC===================
17-02-28 20:25:27.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:25:27.785 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 1 - X = 85.22163 Y = 39.76308===================
17-02-28 20:25:27.809 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:25:27.809 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:27.809 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:25:27.810 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:27.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:25:27.810 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:25:27.810 -08 000000042 INF: Transformed XStagePosition from 86.32964 mm to 86.3141106199473 mm.
17-02-28 20:25:27.842 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:27.842 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Pumping Reagent HB2 (5)===================
17-02-28 20:25:27.843 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:25:27.865 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5537793554841 mm.
17-02-28 20:25:27.866 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3537793554841 mm.
17-02-28 20:25:27.866 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4445293554841 mm.
17-02-28 20:25:27.870 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:25:27.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:27.871 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -156.4 um, section = G_1
17-02-28 20:25:27.907 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:27.909 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:27.912 -08 000000095 INF: ===================MoveEmissionFilters===================
17-02-28 20:25:27.916 -08 000000074 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:27.916 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:25:27.917 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:27.917 -08 000000074 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:27.918 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:25:27.918 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:25:27.918 -08 000000059 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:25:27.918 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:27.919 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:27.920 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:25:27.920 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":7,"Tile":1109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF188","HCSMMF227","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:27.920 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:27.921 -08 000000046 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:25:27.921 -08 000000087 INF: ===================Move X Motor without settling===================
17-02-28 20:25:27.921 -08 000000087 INF: X Motor: Xmit PR VM\n
17-02-28 20:25:27.921 -08 000000046 INF: ======================================
17-02-28 20:25:27.921 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:27.922 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:27.923 -08 000000046 INF: ===================TDI Scan Setup===================
17-02-28 20:25:27.923 -08 000000099 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:25:27.923 -08 000000099 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:25:27.924 -08 000000099 INF: ======================================
17-02-28 20:25:27.924 -08 000000046 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:27.925 -08 000000046 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:25:27.925 -08 000000046 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:27.925 -08 000000074 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:27.925 -08 000000099 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:27.925 -08 000000046 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:25:27.926 -08 000000099 INF: Y Motor: Moving to 64.5538 mm @25.000 mm/sec, started at 14.9054 mm
17-02-28 20:25:27.926 -08 000000099 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:27.926 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:27.926 -08 000000074 INF: ======================================
17-02-28 20:25:27.928 -08 000000074 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:25:27.928 -08 000000074 INF: ======================================
17-02-28 20:25:27.929 -08 000000072 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:27.929 -08 000000076 INF: ===================Camera Arm TDI===================
17-02-28 20:25:27.930 -08 000000072 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:27.930 -08 000000074 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:25:27.930 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:27.931 -08 000000044 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:25:27.936 -08 000000074 INF: ======================================
17-02-28 20:25:27.937 -08 000000073 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:25:27.938 -08 000000074 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:25:27.938 -08 000000073 INF: ======================================
17-02-28 20:25:27.938 -08 000000074 INF: ======================================
17-02-28 20:25:27.939 -08 000000044 INF: ======================================
17-02-28 20:25:27.939 -08 000000076 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:27.940 -08 000000069 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:27.940 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:25:27.940 -08 000000058 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:27.941 -08 000000089 INF: ======================================
17-02-28 20:25:27.941 -08 000000069 INF: ======================================
17-02-28 20:25:27.942 -08 000000058 INF: ======================================
17-02-28 20:25:27.944 -08 000000072 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:27.948 -08 000000072 INF: ======================================
17-02-28 20:25:27.950 -08 000000095 INF: ======================================
17-02-28 20:25:27.951 -08 000000095 INF: FPGA: Recv ZSEL 
17-02-28 20:25:27.953 -08 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:25:27.953 -08 000000087 INF: X Motor: Xmit PR VI\n
17-02-28 20:25:27.961 -08 000000046 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:27.961 -08 000000046 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:25:28.013 -08 000000109 INF: FPGA: Recv TDIBB
17-02-28 20:25:28.014 -08 000000046 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:28.015 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:25:28.015 -08 000000099 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:28.015 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:28.015 -08 000000087 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:25:28.015 -08 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:25:28.015 -08 000000087 INF: X Motor: Moving to 86.3141 mm @15.000 mm/sec, started at 85.2109 mm
17-02-28 20:25:28.015 -08 000000087 INF: X Motor: Xmit MA 11188\n
17-02-28 20:25:28.016 -08 000000046 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:25:28.016 -08 000000046 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:28.019 -08 000000046 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:25:28.019 -08 000000046 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:25:28.019 -08 000000046 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:25:28.025 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":7,"Tile":1105,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF255","HCSMMF236","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.026 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":7,"Tile":1111,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF197","HCSMMF274","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.027 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":7,"Tile":1108,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF224","HCSMMF261","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.028 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":7,"Tile":1101,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF263","HCSMMF186","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.033 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":7,"Tile":1112,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF178","HCSMMF234","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.034 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":7,"Tile":1104,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF239","HCSMMF211","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.049 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":7,"Tile":1102,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF233","HCSMMF204","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.050 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":7,"Tile":1106,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF241","HCSMMF220","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.051 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":7,"Tile":1103,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF275","HCSMMF222","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.051 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":7,"Tile":1107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF214","HCSMMF209","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.052 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":7,"Tile":1116,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF242","HCSMMF187","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.053 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":7,"Tile":1118,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF279","HCSMMF219","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.053 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":7,"Tile":1115,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF206","HCSMMF258","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.054 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":7,"Tile":1113,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF284","HCSMMF253","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.055 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":7,"Tile":1120,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF278","HCSMMF249","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.055 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":7,"Tile":1117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF262","HCSMMF213","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.056 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":7,"Tile":1121,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF245","HCSMMF276","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.057 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":7,"Tile":1110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF216","HCSMMF280","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.058 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":7,"Tile":1119,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF196","HCSMMF244","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.059 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":7,"Tile":1123,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF177","HCSMMF283","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.059 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":7,"Tile":1114,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF281","HCSMMF228","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.060 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":7,"Tile":1125,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF203","HCSMMF259","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.062 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":7,"Tile":1126,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF200","HCSMMF193","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.063 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":7,"Tile":1122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF265","HCSMMF195","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.063 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":7,"Tile":1128,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF237","HCSMMF181","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.064 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":7,"Tile":1124,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF229","HCSMMF272","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.066 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":7,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF285","HCSMMF221","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:28.076 -08 000000023 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:28.076 -08 000000046 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:28.077 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:25:28.077 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:28.078 -08 000000087 INF: X Motor: Recv MA 11188\r\n>
17-02-28 20:25:28.078 -08 000000046 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:25:28.078 -08 000000087 INF: X Motor: WaitUntilStopped 60074
17-02-28 20:25:28.078 -08 000000046 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:28.078 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:28.080 -08 000000046 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:25:28.080 -08 000000046 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:25:28.080 -08 000000046 INF: Z Motor: Arming to move to -0.1164 mm
17-02-28 20:25:28.080 -08 000000046 INF: FPGA: Xmit ZYT 6435378 4\n
17-02-28 20:25:28.084 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:25:28.137 -08 000000108 INF: FPGA: Recv ZYT 
17-02-28 20:25:28.137 -08 000000046 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1490543 enc / 14.905 mm / ) = 6435378 enc / 64.354 mm
17-02-28 20:25:28.137 -08 000000046 INF: FPGA: Xmit ZARM 30512\n
17-02-28 20:25:28.139 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:25:28.139 -08 000000099 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:28.139 -08 000000099 INF: Y Motor: Set target position to 5955378 encoder counts
17-02-28 20:25:28.139 -08 000000099 INF: Y Motor: Xmit s r0xca 5955378\r
17-02-28 20:25:28.171 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:28.171 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:25:28.199 -08 000000052 INF: FPGA: Recv ZARM
17-02-28 20:25:28.199 -08 000000046 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8591 ms
17-02-28 20:25:28.199 -08 000000046 INF: Z Motor: ArmAbsStepped took 118.9144 ms
17-02-28 20:25:28.199 -08 000000046 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:28.201 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:25:28.201 -08 000000046 INF: ===================TDI Scan Setup===================
17-02-28 20:25:28.201 -08 000000099 INF: Y Motor: Start the move command
17-02-28 20:25:28.201 -08 000000099 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:28.202 -08 000000046 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:25:28.203 -08 000000046 INF: ===================TDI Scan Setup===================
17-02-28 20:25:28.204 -08 000000046 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:25:28.204 -08 000000046 INF: ===================TDI Scan Setup===================
17-02-28 20:25:28.206 -08 000000046 INF: ======================================
17-02-28 20:25:28.208 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:28.214 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:25:28.266 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:25:28.266 -08 000000099 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:25:28.266 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:28.306 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:28.311 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:25:28.390 -08 000000099 INF: Y Motor: Unshifted Position: 1075914
17-02-28 20:25:28.411 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:28.416 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:25:28.440 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:28.521 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:28.541 -08 000000076 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:25:28.541 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:25:28.541 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:28.556 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:28.558 -08 000000076 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:28.564 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:28.704 -08 000000099 INF: Y Motor: Unshifted Position: 1779706
17-02-28 20:25:28.704 -08 000000087 INF: X Motor: Xmit PR ER\n
17-02-28 20:25:28.754 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:28.766 -08 000000087 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:25:28.766 -08 000000087 INF: X Motor: Moved to 86.3145 after 688 ms
17-02-28 20:25:28.766 -08 000000087 INF: ======================================
17-02-28 20:25:28.837 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:25:28.875 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:28.942 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:25:29.013 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:29.014 -08 000000099 INF: Y Motor: Unshifted Position: 2568063
17-02-28 20:25:29.064 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:29.113 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:29.162 -08 000000076 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:25:29.162 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:25:29.162 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:29.178 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:29.180 -08 000000076 INF: ===================Camera Arm TDI===================
17-02-28 20:25:29.181 -08 000000076 INF: ======================================
17-02-28 20:25:29.183 -08 000000059 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:29.185 -08 000000059 INF: ======================================
17-02-28 20:25:29.188 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:29.199 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:25:29.326 -08 000000099 INF: Y Motor: Unshifted Position: 3343000
17-02-28 20:25:29.376 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:29.449 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:25:29.499 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:29.513 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:25:29.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:29.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation, Closing shutoff valve===================
17-02-28 20:25:29.638 -08 000000099 INF: Y Motor: Unshifted Position: 4126424
17-02-28 20:25:29.688 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:29.812 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:29.884 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:29.884 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:29.885 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle, Incorporation===================
17-02-28 20:25:29.885 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Chemistry CompleteCycle===================
17-02-28 20:25:29.886 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4===================
17-02-28 20:25:29.887 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:25:29.899 -08 000000018 INF: Call to RTA to retrieve registration transforms took 12 ms.
17-02-28 20:25:29.899 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:25:29.951 -08 000000099 INF: Y Motor: Unshifted Position: 4901356
17-02-28 20:25:30.001 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:30.125 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:30.261 -08 000000099 INF: Y Motor: Unshifted Position: 5683091
17-02-28 20:25:30.311 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:30.436 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:30.574 -08 000000099 INF: Y Motor: Unshifted Position: 5955380
17-02-28 20:25:30.574 -08 000000099 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:30.574 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:30.636 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:25:30.636 -08 000000099 INF: Y Motor: Moved to 64.5538 after 2370 ms
17-02-28 20:25:30.636 -08 000000099 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:30.698 -08 000000099 INF: Y Motor: Recv v 4096\r
17-02-28 20:25:30.698 -08 000000099 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:30.698 -08 000000099 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:30.760 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:25:30.760 -08 000000099 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:30.760 -08 000000099 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:30.822 -08 000000099 INF: Y Motor: Recv v 402653184\r
17-02-28 20:25:30.822 -08 000000099 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:25:30.822 -08 000000099 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:30.822 -08 000000099 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:30.884 -08 000000099 INF: Y Motor: Recv v 0\r
17-02-28 20:25:30.884 -08 000000099 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:30.884 -08 000000099 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:30.884 -08 000000099 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:30.949 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:25:30.949 -08 000000099 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:30.949 -08 000000099 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:31.012 -08 000000099 INF: Y Motor: Recv ok\r
17-02-28 20:25:31.012 -08 000000099 INF: ======================================
17-02-28 20:25:31.013 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:25:31.014 -08 000000037 INF: ======================================
17-02-28 20:25:31.015 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:31.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:31.017 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:25:31.017 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:25:31.075 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:31.075 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:25:31.133 -08 000000066 INF: FPGA: Recv ZFREQCL
17-02-28 20:25:31.133 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:25:31.134 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:31.134 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:31.195 -08 000000089 INF: FPGA: Recv TDIYERD 6455379
17-02-28 20:25:31.195 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455379 counts (64.554 mm)
17-02-28 20:25:31.195 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:31.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:31.197 -08 000000069 INF: ===================TDI FPGA Arm===================
17-02-28 20:25:31.197 -08 000000052 INF: ===================Set YMotor gains for scans===================
17-02-28 20:25:31.197 -08 000000052 INF: ======================================
17-02-28 20:25:31.197 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:31.198 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:25:31.198 -08 000000069 INF: FPGA: Xmit TDIYPOS 6344453\n
17-02-28 20:25:31.259 -08 000000095 INF: FPGA: Recv TDIYPOS
17-02-28 20:25:31.260 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:31.261 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:25:31.262 -08 000000069 INF: FPGA: Xmit TDIYARM3 139264 6435378 1 1\n
17-02-28 20:25:31.319 -08 000000108 INF: FPGA: Recv TDIYARM3
17-02-28 20:25:31.319 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:31.321 -08 000000069 INF: ===================TDI FPGA Arm===================
17-02-28 20:25:31.322 -08 000000069 INF: ======================================
17-02-28 20:25:31.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:31.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:31.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:31.324 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:31.325 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:31.326 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:25:31.326 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:25:31.326 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:25:31.326 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:25:31.326 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:25:31.327 -08 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:25:31.327 -08 000000037 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:25:31.327 -08 000000037 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:25:31.327 -08 000000037 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:25:31.330 -08 000000037 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:25:31.694 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:25:31.694 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:25:31.694 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 368.0255 ms
17-02-28 20:25:31.694 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.181 ms
17-02-28 20:25:31.694 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.2555 ms
17-02-28 20:25:31.695 -08 000000037 INF: Excitation Filter 1: Moved -107 steps in 366.9562 ms
17-02-28 20:25:31.695 -08 000000050 INF: ======================================
17-02-28 20:25:31.695 -08 000000037 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.5374 ms
17-02-28 20:25:31.695 -08 000000037 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.6431 ms
17-02-28 20:25:31.695 -08 000000037 INF: ======================================
17-02-28 20:25:31.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:31.697 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:31.698 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:25:31.698 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:31.698 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:25:31.698 -08 000000104 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:31.698 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:25:31.698 -08 000000104 INF: Y Motor: Moving to 14.9054 mm @6.500 mm/sec, started at 64.5538 mm
17-02-28 20:25:31.699 -08 000000104 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:31.699 -08 000000104 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:31.699 -08 000000052 INF: ===================Camera TDI, Parallel===================
17-02-28 20:25:31.699 -08 000000077 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:25:31.699 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:25:31.700 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:25:31.702 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:31.702 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:31.704 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:31.704 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:31.705 -08 000000077 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:25:31.758 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:25:31.758 -08 000000104 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:31.758 -08 000000104 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:31.820 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:25:31.820 -08 000000104 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:31.852 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:31.852 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:31.854 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:31.854 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:31.893 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:25:31.893 -08 000000104 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:31.893 -08 000000104 INF: Y Motor: Set target position to 990544 encoder counts
17-02-28 20:25:31.893 -08 000000104 INF: Y Motor: Xmit s r0xca 990544\r
17-02-28 20:25:31.947 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:25:31.947 -08 000000104 INF: Y Motor: Start the move command
17-02-28 20:25:31.947 -08 000000104 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:32.002 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:32.002 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:32.004 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:32.004 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:32.009 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:25:32.009 -08 000000104 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:25:32.009 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:32.069 -08 000000046 INF: FPGA: Recv ZWAIT 
17-02-28 20:25:32.069 -08 000000039 INF: ======================================
17-02-28 20:25:32.133 -08 000000104 INF: Y Motor: Unshifted Position: 5893525
17-02-28 20:25:32.152 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:32.152 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:32.152 -08 000000047 INF: ===================Camera #2 Frame #5===================
17-02-28 20:25:32.154 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:32.154 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:32.154 -08 000000085 INF: ===================Camera #0 Frame #5===================
17-02-28 20:25:32.183 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:32.307 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:32.319 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:25:32.319 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:25:32.319 -08 000000085 INF: ===================Camera #0 Frame #11===================
17-02-28 20:25:32.326 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:25:32.326 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:25:32.326 -08 000000047 INF: ===================Camera #2 Frame #11===================
17-02-28 20:25:32.446 -08 000000104 INF: Y Motor: Unshifted Position: 5690077
17-02-28 20:25:32.496 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:32.501 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:25:32.501 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:25:32.501 -08 000000085 INF: ===================Camera #0 Frame #17===================
17-02-28 20:25:32.504 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:25:32.504 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:25:32.504 -08 000000047 INF: ===================Camera #2 Frame #17===================
17-02-28 20:25:32.620 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:32.677 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:25:32.677 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:25:32.677 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:25:32.677 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:25:32.677 -08 000000047 INF: ===================Camera #2 Frame #24===================
17-02-28 20:25:32.677 -08 000000085 INF: ===================Camera #0 Frame #24===================
17-02-28 20:25:32.756 -08 000000104 INF: Y Motor: Unshifted Position: 5488371
17-02-28 20:25:32.806 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:32.858 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:25:32.858 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:25:32.858 -08 000000085 INF: ===================Camera #0 Frame #31===================
17-02-28 20:25:32.859 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:25:32.859 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:25:32.859 -08 000000047 INF: ===================Camera #2 Frame #31===================
17-02-28 20:25:32.933 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.033 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:25:33.033 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:25:33.033 -08 000000085 INF: ===================Camera #0 Frame #37===================
17-02-28 20:25:33.041 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:25:33.041 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:25:33.041 -08 000000047 INF: ===================Camera #2 Frame #37===================
17-02-28 20:25:33.069 -08 000000104 INF: Y Motor: Unshifted Position: 5284696
17-02-28 20:25:33.119 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.209 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:25:33.209 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:25:33.209 -08 000000085 INF: ===================Camera #0 Frame #43===================
17-02-28 20:25:33.219 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:25:33.219 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:25:33.219 -08 000000047 INF: ===================Camera #2 Frame #44===================
17-02-28 20:25:33.243 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.381 -08 000000104 INF: Y Motor: Unshifted Position: 5081886
17-02-28 20:25:33.384 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:25:33.384 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:25:33.384 -08 000000085 INF: ===================Camera #0 Frame #50===================
17-02-28 20:25:33.392 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:25:33.392 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:25:33.392 -08 000000047 INF: ===================Camera #2 Frame #50===================
17-02-28 20:25:33.431 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.555 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.565 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:25:33.565 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:25:33.565 -08 000000085 INF: ===================Camera #0 Frame #57===================
17-02-28 20:25:33.571 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:25:33.571 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:25:33.571 -08 000000047 INF: ===================Camera #2 Frame #57===================
17-02-28 20:25:33.694 -08 000000104 INF: Y Motor: Unshifted Position: 4878441
17-02-28 20:25:33.744 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.746 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:25:33.746 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:25:33.746 -08 000000085 INF: ===================Camera #0 Frame #63===================
17-02-28 20:25:33.755 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 63, frameCount = 64.
17-02-28 20:25:33.755 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 64
17-02-28 20:25:33.755 -08 000000047 INF: ===================Camera #2 Frame #64===================
17-02-28 20:25:33.868 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:33.918 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:25:33.918 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:25:33.918 -08 000000085 INF: ===================Camera #0 Frame #70===================
17-02-28 20:25:33.938 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:25:33.938 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:25:33.938 -08 000000047 INF: ===================Camera #2 Frame #70===================
17-02-28 20:25:34.004 -08 000000104 INF: Y Motor: Unshifted Position: 4676723
17-02-28 20:25:34.054 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.097 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:25:34.097 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:25:34.097 -08 000000085 INF: ===================Camera #0 Frame #76===================
17-02-28 20:25:34.116 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:25:34.116 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:25:34.116 -08 000000047 INF: ===================Camera #2 Frame #77===================
17-02-28 20:25:34.181 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.274 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:25:34.274 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:25:34.274 -08 000000085 INF: ===================Camera #0 Frame #83===================
17-02-28 20:25:34.294 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:25:34.294 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:25:34.294 -08 000000047 INF: ===================Camera #2 Frame #83===================
17-02-28 20:25:34.317 -08 000000104 INF: Y Motor: Unshifted Position: 4473265
17-02-28 20:25:34.367 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.449 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:25:34.449 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:25:34.449 -08 000000085 INF: ===================Camera #0 Frame #89===================
17-02-28 20:25:34.473 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:25:34.473 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:25:34.473 -08 000000047 INF: ===================Camera #2 Frame #90===================
17-02-28 20:25:34.491 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.618 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:25:34.618 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:25:34.618 -08 000000085 INF: ===================Camera #0 Frame #95===================
17-02-28 20:25:34.630 -08 000000104 INF: Y Motor: Unshifted Position: 4269599
17-02-28 20:25:34.648 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:25:34.648 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:25:34.648 -08 000000047 INF: ===================Camera #2 Frame #96===================
17-02-28 20:25:34.680 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.789 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:25:34.789 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:25:34.789 -08 000000085 INF: ===================Camera #0 Frame #102===================
17-02-28 20:25:34.804 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.818 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 102, frameCount = 103.
17-02-28 20:25:34.818 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 103
17-02-28 20:25:34.818 -08 000000047 INF: ===================Camera #2 Frame #103===================
17-02-28 20:25:34.940 -08 000000104 INF: Y Motor: Unshifted Position: 4068095
17-02-28 20:25:34.960 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:25:34.960 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:25:34.960 -08 000000085 INF: ===================Camera #0 Frame #108===================
17-02-28 20:25:34.990 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:34.990 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:25:34.990 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:25:34.990 -08 000000047 INF: ===================Camera #2 Frame #109===================
17-02-28 20:25:35.117 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:35.128 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:25:35.128 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:25:35.128 -08 000000085 INF: ===================Camera #0 Frame #114===================
17-02-28 20:25:35.160 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:25:35.160 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:25:35.160 -08 000000047 INF: ===================Camera #2 Frame #115===================
17-02-28 20:25:35.255 -08 000000104 INF: Y Motor: Unshifted Position: 3864430
17-02-28 20:25:35.297 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:25:35.297 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:25:35.297 -08 000000085 INF: ===================Camera #0 Frame #120===================
17-02-28 20:25:35.305 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:35.329 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:25:35.329 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:25:35.329 -08 000000047 INF: ===================Camera #2 Frame #121===================
17-02-28 20:25:35.427 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:35.465 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:25:35.465 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:25:35.465 -08 000000085 INF: ===================Camera #0 Frame #127===================
17-02-28 20:25:35.498 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128.
17-02-28 20:25:35.498 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128
17-02-28 20:25:35.498 -08 000000047 INF: ===================Camera #2 Frame #128===================
17-02-28 20:25:35.566 -08 000000104 INF: Y Motor: Unshifted Position: 3660976
17-02-28 20:25:35.616 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:35.638 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:25:35.638 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:25:35.638 -08 000000085 INF: ===================Camera #0 Frame #133===================
17-02-28 20:25:35.670 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:25:35.670 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:25:35.670 -08 000000047 INF: ===================Camera #2 Frame #134===================
17-02-28 20:25:35.740 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:35.807 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:25:35.807 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:25:35.807 -08 000000085 INF: ===================Camera #0 Frame #139===================
17-02-28 20:25:35.840 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:25:35.840 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:25:35.840 -08 000000047 INF: ===================Camera #2 Frame #140===================
17-02-28 20:25:35.876 -08 000000104 INF: Y Motor: Unshifted Position: 3459266
17-02-28 20:25:35.926 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:35.975 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:25:35.975 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:25:35.975 -08 000000085 INF: ===================Camera #0 Frame #145===================
17-02-28 20:25:36.009 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147.
17-02-28 20:25:36.009 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147
17-02-28 20:25:36.009 -08 000000047 INF: ===================Camera #2 Frame #147===================
17-02-28 20:25:36.053 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:36.143 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:25:36.143 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:25:36.143 -08 000000085 INF: ===================Camera #0 Frame #151===================
17-02-28 20:25:36.181 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:25:36.181 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:25:36.181 -08 000000047 INF: ===================Camera #2 Frame #153===================
17-02-28 20:25:36.189 -08 000000104 INF: Y Motor: Unshifted Position: 3254949
17-02-28 20:25:36.239 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:36.313 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:25:36.313 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:25:36.313 -08 000000085 INF: ===================Camera #0 Frame #158===================
17-02-28 20:25:36.351 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:25:36.351 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:25:36.351 -08 000000047 INF: ===================Camera #2 Frame #159===================
17-02-28 20:25:36.366 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:36.484 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:25:36.484 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:25:36.484 -08 000000085 INF: ===================Camera #0 Frame #164===================
17-02-28 20:25:36.503 -08 000000104 INF: Y Motor: Unshifted Position: 3052153
17-02-28 20:25:36.520 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:25:36.520 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:25:36.520 -08 000000047 INF: ===================Camera #2 Frame #165===================
17-02-28 20:25:36.553 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:36.652 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:25:36.652 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:25:36.652 -08 000000085 INF: ===================Camera #0 Frame #170===================
17-02-28 20:25:36.677 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:36.689 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 171, frameCount = 172.
17-02-28 20:25:36.689 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 172
17-02-28 20:25:36.689 -08 000000047 INF: ===================Camera #2 Frame #172===================
17-02-28 20:25:36.813 -08 000000104 INF: Y Motor: Unshifted Position: 2850657
17-02-28 20:25:36.820 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:25:36.820 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:25:36.820 -08 000000085 INF: ===================Camera #0 Frame #176===================
17-02-28 20:25:36.861 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:25:36.861 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:25:36.861 -08 000000047 INF: ===================Camera #2 Frame #178===================
17-02-28 20:25:36.863 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:36.988 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:25:36.988 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:25:36.988 -08 000000085 INF: ===================Camera #0 Frame #183===================
17-02-28 20:25:36.990 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:37.030 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:25:37.030 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:25:37.030 -08 000000047 INF: ===================Camera #2 Frame #184===================
17-02-28 20:25:37.126 -08 000000104 INF: Y Motor: Unshifted Position: 2646991
17-02-28 20:25:37.159 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:25:37.159 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:25:37.159 -08 000000085 INF: ===================Camera #0 Frame #189===================
17-02-28 20:25:37.176 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:37.199 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:25:37.199 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:25:37.199 -08 000000047 INF: ===================Camera #2 Frame #190===================
17-02-28 20:25:37.301 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:37.327 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:25:37.327 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:25:37.327 -08 000000085 INF: ===================Camera #0 Frame #195===================
17-02-28 20:25:37.368 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 196, frameCount = 197.
17-02-28 20:25:37.368 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 197
17-02-28 20:25:37.368 -08 000000047 INF: ===================Camera #2 Frame #197===================
17-02-28 20:25:37.437 -08 000000104 INF: Y Motor: Unshifted Position: 2444846
17-02-28 20:25:37.487 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:37.495 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:25:37.495 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:25:37.495 -08 000000085 INF: ===================Camera #0 Frame #201===================
17-02-28 20:25:37.540 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:25:37.540 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:25:37.540 -08 000000047 INF: ===================Camera #2 Frame #203===================
17-02-28 20:25:37.614 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:37.663 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:25:37.663 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:25:37.663 -08 000000085 INF: ===================Camera #0 Frame #207===================
17-02-28 20:25:37.709 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:25:37.709 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:25:37.709 -08 000000047 INF: ===================Camera #2 Frame #209===================
17-02-28 20:25:37.750 -08 000000104 INF: Y Motor: Unshifted Position: 2241181
17-02-28 20:25:37.800 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:37.831 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:25:37.831 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:25:37.831 -08 000000085 INF: ===================Camera #0 Frame #214===================
17-02-28 20:25:37.878 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:25:37.878 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:25:37.878 -08 000000047 INF: ===================Camera #2 Frame #215===================
17-02-28 20:25:37.926 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.002 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:25:38.002 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:25:38.002 -08 000000085 INF: ===================Camera #0 Frame #220===================
17-02-28 20:25:38.047 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 221, frameCount = 222.
17-02-28 20:25:38.047 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 222
17-02-28 20:25:38.047 -08 000000047 INF: ===================Camera #2 Frame #222===================
17-02-28 20:25:38.063 -08 000000104 INF: Y Motor: Unshifted Position: 2037506
17-02-28 20:25:38.113 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.170 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:25:38.170 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:25:38.170 -08 000000085 INF: ===================Camera #0 Frame #226===================
17-02-28 20:25:38.219 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:25:38.219 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:25:38.219 -08 000000047 INF: ===================Camera #2 Frame #228===================
17-02-28 20:25:38.239 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.338 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:25:38.338 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:25:38.338 -08 000000085 INF: ===================Camera #0 Frame #232===================
17-02-28 20:25:38.373 -08 000000104 INF: Y Motor: Unshifted Position: 1836009
17-02-28 20:25:38.388 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:25:38.388 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:25:38.388 -08 000000047 INF: ===================Camera #2 Frame #234===================
17-02-28 20:25:38.423 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.506 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:25:38.506 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:25:38.506 -08 000000085 INF: ===================Camera #0 Frame #238===================
17-02-28 20:25:38.550 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.557 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:25:38.557 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:25:38.557 -08 000000047 INF: ===================Camera #2 Frame #240===================
17-02-28 20:25:38.674 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:25:38.674 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:25:38.674 -08 000000085 INF: ===================Camera #0 Frame #245===================
17-02-28 20:25:38.686 -08 000000104 INF: Y Motor: Unshifted Position: 1632337
17-02-28 20:25:38.726 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 246, frameCount = 247.
17-02-28 20:25:38.726 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 247
17-02-28 20:25:38.726 -08 000000047 INF: ===================Camera #2 Frame #247===================
17-02-28 20:25:38.736 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.845 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:25:38.845 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:25:38.845 -08 000000085 INF: ===================Camera #0 Frame #251===================
17-02-28 20:25:38.860 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:38.898 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:25:38.898 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:25:38.898 -08 000000047 INF: ===================Camera #2 Frame #253===================
17-02-28 20:25:38.999 -08 000000104 INF: Y Motor: Unshifted Position: 1428887
17-02-28 20:25:39.013 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:25:39.013 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:25:39.013 -08 000000085 INF: ===================Camera #0 Frame #257===================
17-02-28 20:25:39.049 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:39.067 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:25:39.067 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:25:39.067 -08 000000047 INF: ===================Camera #2 Frame #259===================
17-02-28 20:25:39.174 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:39.181 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:25:39.181 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:25:39.181 -08 000000085 INF: ===================Camera #0 Frame #263===================
17-02-28 20:25:39.237 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:25:39.237 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:25:39.237 -08 000000047 INF: ===================Camera #2 Frame #265===================
17-02-28 20:25:39.309 -08 000000104 INF: Y Motor: Unshifted Position: 1227160
17-02-28 20:25:39.351 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:25:39.351 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:25:39.351 -08 000000085 INF: ===================Camera #0 Frame #270===================
17-02-28 20:25:39.359 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:39.408 -08 000000047 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:25:39.408 -08 000000047 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:25:39.408 -08 000000047 INF: ===================Camera #2 Frame #272===================
17-02-28 20:25:39.432 -08 000000047 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:25:39.433 -08 000000047 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:39.433 -08 000000034 INF: FPGA: Recv TDIYWAIT
17-02-28 20:25:39.434 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:39.435 -08 000000077 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:25:39.436 -08 000000083 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:25:39.436 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:25:39.436 -08 000000083 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:25:39.436 -08 000000083 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:25:39.436 -08 000000083 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:25:39.436 -08 000000083 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:25:39.436 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:25:39.436 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:25:39.436 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:25:39.437 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:25:39.485 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:39.602 -08 000000047 INF: Camera #2 ReleaseBuffer
17-02-28 20:25:39.602 -08 000000085 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:25:39.602 -08 000000085 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:25:39.602 -08 000000085 INF: ===================Camera #0 Frame #272===================
17-02-28 20:25:39.602 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:25:39.609 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:25:39.609 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:39.622 -08 000000104 INF: Y Motor: Unshifted Position: 1024368
17-02-28 20:25:39.634 -08 000000047 INF: ======================================
17-02-28 20:25:39.672 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:39.744 -08 000000085 INF: Camera #0 ReleaseBuffer
17-02-28 20:25:39.744 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:25:39.774 -08 000000085 INF: ======================================
17-02-28 20:25:39.776 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:25:39.777 -08 000000052 INF: ======================================
17-02-28 20:25:39.806 -08 000000099 INF: FPGA: Recv EX1MV
17-02-28 20:25:39.806 -08 000000099 INF: FPGA: Recv EX2MV
17-02-28 20:25:39.806 -08 000000083 INF: Excitation Filter 1: Moved 107 steps in 369.7964 ms
17-02-28 20:25:39.806 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 369.6652 ms
17-02-28 20:25:39.806 -08 000000083 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.9005 ms
17-02-28 20:25:39.806 -08 000000083 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.0115 ms
17-02-28 20:25:39.806 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.7986 ms
17-02-28 20:25:39.806 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.9681 ms
17-02-28 20:25:39.806 -08 000000083 INF: ======================================
17-02-28 20:25:39.806 -08 000000078 INF: ======================================
17-02-28 20:25:39.807 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:39.808 -08 000000104 INF: Y Motor: Unshifted Position: 990545
17-02-28 20:25:39.808 -08 000000104 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:39.808 -08 000000104 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:39.809 -08 000000077 INF: ======================================
17-02-28 20:25:39.873 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:25:39.873 -08 000000104 INF: Y Motor: Moved to 14.9055 after 7863 ms
17-02-28 20:25:39.873 -08 000000104 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:39.935 -08 000000104 INF: Y Motor: Recv v 4097\r
17-02-28 20:25:39.935 -08 000000104 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:39.935 -08 000000104 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:39.997 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:25:39.997 -08 000000104 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:39.997 -08 000000104 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:40.059 -08 000000104 INF: Y Motor: Recv v 134217728\r
17-02-28 20:25:40.059 -08 000000104 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:25:40.059 -08 000000104 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:40.059 -08 000000104 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:40.121 -08 000000104 INF: Y Motor: Recv v 0\r
17-02-28 20:25:40.121 -08 000000104 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:40.121 -08 000000104 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:40.121 -08 000000104 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:40.185 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:25:40.185 -08 000000104 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:40.185 -08 000000104 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:40.245 -08 000000104 INF: Y Motor: Recv ok\r
17-02-28 20:25:40.245 -08 000000104 INF: ======================================
17-02-28 20:25:40.246 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:40.247 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:40.248 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.248 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:25:40.305 -08 000000099 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:25:40.305 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:40.371 -08 000000033 INF: FPGA: Recv TDIYERD 1490546
17-02-28 20:25:40.371 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:25:40.432 -08 000000078 INF: FPGA: Recv ZADCR 35438
17-02-28 20:25:40.432 -08 000000042 INF: At scan end Y pos = 14.905 and Z pos = -0.136. Y moved -48.539 mm
17-02-28 20:25:40.432 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:25:40.493 -08 000000104 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:25:40.493 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:25:40.493 -08 000000042 INF: TDIScan finished after 12682.3727 ms
17-02-28 20:25:40.493 -08 000000042 INF: Image[0]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:25:40.493 -08 000000042 INF: Image[2]: Y should trigger at 63.445 mm, 2nd row was at 64.353 mm (error = 0.909 mm)
17-02-28 20:25:40.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.530 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.673 um
17-02-28 20:25:40.530 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.531 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:25:40.555 -08 000000078 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:25:40.556 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.556 -08 000000066 INF: ===================Dither Clean Up Command===================
17-02-28 20:25:40.556 -08 000000037 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:25:40.556 -08 000000033 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:25:40.556 -08 000000085 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:25:40.556 -08 000000037 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:40.557 -08 000000037 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:40.557 -08 000000085 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:25:40.557 -08 000000085 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:25:40.557 -08 000000054 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:25:40.557 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:40.557 -08 000000033 INF: ======================================
17-02-28 20:25:40.558 -08 000000054 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:25:40.560 -08 000000074 INF: ===================LFT:Extracting coords===================
17-02-28 20:25:40.586 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:40.586 -08 000000074 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:25:40.587 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.587 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.587 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.587 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.587 -08 000000109 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:40.587 -08 000000104 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:40.588 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:40.588 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:25:40.619 -08 000000037 INF: Y Motor: Recv ok\r
17-02-28 20:25:40.619 -08 000000037 INF: ======================================
17-02-28 20:25:40.619 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:40.619 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:25:40.620 -08 000000054 INF: FPGA: Xmit ZDACW 40998\n
17-02-28 20:25:40.620 -08 000000085 INF: ======================================
17-02-28 20:25:40.662 -08 000000109 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:40.662 -08 000000058 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:40.663 -08 000000077 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:40.668 -08 000000104 INF: FC:B, C:3,L:7, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:25:40.683 -08 000000033 INF: FPGA: Recv ZDACW 
17-02-28 20:25:40.684 -08 000000054 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:25:40.684 -08 000000054 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:25:40.742 -08 000000105 INF: FPGA: Recv TDIBB
17-02-28 20:25:40.742 -08 000000054 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:25:40.743 -08 000000054 INF: ======================================
17-02-28 20:25:40.813 -08 000000109 INF: LFT found best fwhm score 2.000153 in 151 ms
17-02-28 20:25:40.813 -08 000000109 INF: LFT found good score at index 6697 with fwhm value 2.000153. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:7,T
17-02-28 20:25:40.813 -08 000000058 INF: LFT found best fwhm score 2.117698 in 151 ms
17-02-28 20:25:40.813 -08 000000058 INF: LFT found good score at index 2465 with fwhm value 2.117698. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:7,T
17-02-28 20:25:40.813 -08 000000109 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.813 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.814 -08 000000109 INF: ======================================
17-02-28 20:25:40.814 -08 000000058 INF: ======================================
17-02-28 20:25:40.815 -08 000000077 INF: LFT found best fwhm score 2.000016 in 152 ms
17-02-28 20:25:40.815 -08 000000077 INF: LFT found good score at index 3041 with fwhm value 2.000016. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:7,T
17-02-28 20:25:40.815 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.816 -08 000000077 INF: ======================================
17-02-28 20:25:40.832 -08 000000104 INF: LFT found best fwhm score 2.00039 in 163 ms
17-02-28 20:25:40.832 -08 000000104 INF: LFT found good score at index 8169 with fwhm value 2.00039. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:7,T
17-02-28 20:25:40.832 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:25:40.832 -08 000000104 INF: ======================================
17-02-28 20:25:40.834 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:25:40.835 -08 000000074 INF: LFT weighted average best Z for top surface is at -0.155mm FC:B, C:3,L:7,T
17-02-28 20:25:40.835 -08 000000074 INF: ======================================
17-02-28 20:25:40.836 -08 000000066 INF: ======================================
17-02-28 20:25:40.837 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:25:40.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:25:40.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:25:40.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:25:40.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:40.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:25:40.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:25:40.840 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:25:40.840 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:25:40.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:25:40.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7, Swath 2 - X = 86.32964 Y = 39.76308===================
17-02-28 20:25:40.865 -08 000000042 INF: Waited 25 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:25:40.865 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:40.865 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:40.865 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:40.866 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:25:40.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 7===================
17-02-28 20:25:40.867 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:25:40.884 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:40.885 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:40.886 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:40.886 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:40.919 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":7,"Tile":1201,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF237","HCSMMF217","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.025 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:41.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:41.026 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:25:41.026 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:25:41.118 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":7,"Tile":1214,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF203","HCSMMF245","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.157 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":7,"Tile":1204,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF195","HCSMMF229","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.158 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":7,"Tile":1208,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF236","HCSMMF191","HCSMMF268"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.159 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":7,"Tile":1203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF286","HCSMMF278","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.161 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":7,"Tile":1210,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF206","HCSMMF222","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.161 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":7,"Tile":1207,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF230","HCSMMF198","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.162 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":7,"Tile":1205,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF272","HCSMMF275","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.163 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":7,"Tile":1209,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF258","HCSMMF201","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.164 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":7,"Tile":1206,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF231","HCSMMF196","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.165 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":7,"Tile":1211,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF246","HCSMMF218","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.166 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":7,"Tile":1202,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF212","HCSMMF205","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.166 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":7,"Tile":1212,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF287","HCSMMF256","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.167 -08 000000109 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":7,"Tile":1217,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF188","HCSMMF251","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.168 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":7,"Tile":1213,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF259","HCSMMF180","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.168 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":7,"Tile":1215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF282","HCSMMF194","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.169 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":7,"Tile":1218,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF232","HCSMMF220","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.170 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":7,"Tile":1216,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF202","HCSMMF270","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.171 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":7,"Tile":1220,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF253","HCSMMF250","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.172 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":7,"Tile":1223,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF226","HCSMMF273","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.173 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":7,"Tile":1221,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF216","HCSMMF284","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.174 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":7,"Tile":1224,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF277","HCSMMF240","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.175 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":7,"Tile":1225,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF283","HCSMMF260","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.176 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":7,"Tile":1219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF234","HCSMMF269","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.177 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":7,"Tile":1227,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF261","HCSMMF193","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.179 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":7,"Tile":1222,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF238","HCSMMF223","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.180 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":7,"Tile":1226,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF213","HCSMMF200","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.181 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":7,"Tile":1228,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF207","HCSMMF219","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:25:41.218 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:41.225 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:25:41.325 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:41.325 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:25:41.363 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:41.368 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:25:41.429 -08 000000064 INF: FPGA: Recv MIOCOMPR
17-02-28 20:25:41.429 -08 000000042 INF: Compensator: Moved OutOfPath in 403 ms
17-02-28 20:25:41.430 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:41.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:41.432 -08 000000074 INF: ===================Move Tilt Motor 1===================
17-02-28 20:25:41.432 -08 000000044 INF: ===================Move Tilt Motor 2===================
17-02-28 20:25:41.432 -08 000000076 INF: ===================Move Tilt Motor 3===================
17-02-28 20:25:41.432 -08 000000074 INF: Tilt Motor 1: Moving to 4.9414 mm, started at 5.0005 mm, delta = -0.0591 mm
17-02-28 20:25:41.432 -08 000000074 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:41.432 -08 000000044 INF: Tilt Motor 2: Moving to 5.5602 mm, started at 5.3924 mm, delta = 0.1678 mm
17-02-28 20:25:41.432 -08 000000076 INF: Tilt Motor 3: Moving to 5.5066 mm, started at 5.3393 mm, delta = 0.1673 mm
17-02-28 20:25:41.435 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:41.439 -08 000000076 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:41.450 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:41.456 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:25:41.491 -08 000000060 INF: FPGA: Recv T1RD 19687
17-02-28 20:25:41.491 -08 000000060 INF: FPGA: Recv T2RD 21229
17-02-28 20:25:41.491 -08 000000060 INF: FPGA: Recv T3RD 21019
17-02-28 20:25:41.491 -08 000000076 INF: Tilt Motor 3: Encoder: at motor step 3503 + 1/6
17-02-28 20:25:41.491 -08 000000076 INF: Tilt Motor 3: Moving to 21680 encoder counts
17-02-28 20:25:41.491 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3538 + 1/6
17-02-28 20:25:41.491 -08 000000044 INF: Tilt Motor 2: Moving to 21891 encoder counts
17-02-28 20:25:41.491 -08 000000076 INF: FPGA: Xmit T3MOVETO 21680\n
17-02-28 20:25:41.491 -08 000000074 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:25:41.491 -08 000000074 INF: Tilt Motor 1: Moving to 19454 encoder counts
17-02-28 20:25:41.492 -08 000000074 INF: FPGA: Xmit T1MOVETO 19454\n
17-02-28 20:25:41.494 -08 000000044 INF: FPGA: Xmit T2MOVETO 21891\n
17-02-28 20:25:41.532 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:41.537 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:25:41.683 -08 000000052 INF: FPGA: Recv T1MOVETO 38
17-02-28 20:25:41.683 -08 000000074 INF: Tilt Motor 1: To move from 5.000 to 4.941 (-0.059 mm) should take 39 steps, but required 38 steps (0.058 mm). Slippage = -0.002 mm (0.03%)
17-02-28 20:25:41.683 -08 000000074 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:41.743 -08 000000059 INF: FPGA: Recv T1RD 19459
17-02-28 20:25:41.743 -08 000000059 INF: FPGA: Recv T3MOVETO 109
17-02-28 20:25:41.743 -08 000000059 INF: FPGA: Recv T2MOVETO 110
17-02-28 20:25:41.743 -08 000000044 INF: Tilt Motor 2: To move from 5.392 to 5.560 (0.168 mm) should take 110 steps, but required 110 steps (0.168 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:25:41.743 -08 000000076 INF: Tilt Motor 3: To move from 5.339 to 5.507 (0.167 mm) should take 110 steps, but required 109 steps (0.166 mm). Slippage = -0.002 mm (-0.01%)
17-02-28 20:25:41.743 -08 000000074 INF: Tilt Motor 1: Encoder: at motor step 3243 + 1/6
17-02-28 20:25:41.743 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:41.746 -08 000000076 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:41.747 -08 000000074 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:41.789 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:25:41.805 -08 000000109 INF: FPGA: Recv T2RD 21889
17-02-28 20:25:41.805 -08 000000109 INF: FPGA: Recv T3RD 21675
17-02-28 20:25:41.805 -08 000000109 INF: FPGA: Recv T1RD 19459
17-02-28 20:25:41.805 -08 000000074 INF: Tilt Motor 1: Encoder: at motor step 3243 + 1/6
17-02-28 20:25:41.805 -08 000000076 INF: Tilt Motor 3: Encoder: at motor step 3612 + 3/6
17-02-28 20:25:41.805 -08 000000074 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:41.805 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:25:41.806 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:41.808 -08 000000076 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:41.869 -08 000000073 INF: FPGA: Recv T1RD 19459
17-02-28 20:25:41.869 -08 000000073 INF: FPGA: Recv T2RD 21889
17-02-28 20:25:41.870 -08 000000073 INF: FPGA: Recv T3RD 21674
17-02-28 20:25:41.870 -08 000000076 INF: Tilt Motor 3: Encoder: at motor step 3612 + 2/6
17-02-28 20:25:41.870 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:25:41.870 -08 000000076 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:41.870 -08 000000074 INF: Tilt Motor 1: Encoder: at motor step 3243 + 1/6
17-02-28 20:25:41.870 -08 000000074 INF: Tilt Motor 1: After move to 4.9414, error = 0.0011, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:41.870 -08 000000074 INF: Tilt Motor 1: Moved to 4.9426 after 438.0106 ms
17-02-28 20:25:41.871 -08 000000074 INF: ======================================
17-02-28 20:25:41.871 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:41.930 -08 000000060 INF: FPGA: Recv T3RD 21674
17-02-28 20:25:41.930 -08 000000060 INF: FPGA: Recv T2RD 21889
17-02-28 20:25:41.930 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:25:41.930 -08 000000076 INF: Tilt Motor 3: Encoder: at motor step 3612 + 2/6
17-02-28 20:25:41.930 -08 000000076 INF: Tilt Motor 3: After move to 5.5066, error = -0.0014, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:41.930 -08 000000044 INF: Tilt Motor 2: After move to 5.5602, error = -0.0004, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:41.930 -08 000000076 INF: Tilt Motor 3: Moved to 5.5052 after 497.7226 ms
17-02-28 20:25:41.930 -08 000000044 INF: Tilt Motor 2: Moved to 5.5598 after 497.8903 ms
17-02-28 20:25:41.930 -08 000000076 INF: ======================================
17-02-28 20:25:41.930 -08 000000044 INF: ======================================
17-02-28 20:25:41.931 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:41.932 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:41.933 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.9414379905051, m2=5.56021691927735, m3=5.50662291927735
17-02-28 20:25:41.939 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:25:41.947 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:25:41.947 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:25:41.947 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:25:41.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:41.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:41.951 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:25:41.952 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:25:41.952 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:25:41.991 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:41.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:41.992 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:25:41.992 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1564 mm
17-02-28 20:25:41.992 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:25:42.053 -08 000000037 INF: FPGA: Recv ZTRG 
17-02-28 20:25:42.053 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:25:42.086 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:25:42.115 -08 000000100 INF: FPGA: Recv ZYT 
17-02-28 20:25:42.115 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:25:42.115 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:25:42.177 -08 000000069 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:25:42.177 -08 000000069 INF: FPGA: Recv ZMV 
17-02-28 20:25:42.177 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:25:42.177 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.01 ms
17-02-28 20:25:42.177 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:25:42.243 -08 000000089 INF: FPGA: Recv ZDACR 60292
17-02-28 20:25:42.243 -08 000000042 INF: Z Motor: MoveAndTrigger took 251.4023 ms w/comms
17-02-28 20:25:42.243 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:42.243 -08 000000042 INF: Z Motor: MoveAbsStepped took 251.619 ms
17-02-28 20:25:42.244 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:42.244 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:25:42.253 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:25:42.253 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:42.253 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:42.253 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:25:42.253 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:25:42.302 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:42.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:42.322 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:25:42.330 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:25:42.330 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:42.330 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:25:42.332 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:42.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:25:42.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:42.333 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:25:42.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:42.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:42.335 -08 000000059 INF: ===================Move X,Y===================
17-02-28 20:25:42.335 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:25:42.335 -08 000000059 INF: ===================Move X,Y, Parallel===================
17-02-28 20:25:42.336 -08 000000102 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:42.336 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:42.336 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:42.336 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:42.336 -08 000000073 INF: ===================Move X Motor without settling===================
17-02-28 20:25:42.336 -08 000000102 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:42.337 -08 000000073 INF: X Motor: Xmit PR VM\n
17-02-28 20:25:42.337 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:42.337 -08 000000039 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9055 mm
17-02-28 20:25:42.337 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:42.337 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:42.337 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:42.337 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:42.337 -08 000000091 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:25:42.338 -08 000000091 INF: ======================================
17-02-28 20:25:42.338 -08 000000046 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:25:42.338 -08 000000074 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:25:42.338 -08 000000095 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:25:42.339 -08 000000083 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:25:42.339 -08 000000046 INF: ======================================
17-02-28 20:25:42.339 -08 000000023 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:25:42.339 -08 000000023 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:25:42.339 -08 000000095 INF: ======================================
17-02-28 20:25:42.339 -08 000000023 INF: ======================================
17-02-28 20:25:42.340 -08 000000083 INF: ======================================
17-02-28 20:25:42.340 -08 000000074 INF: ======================================
17-02-28 20:25:42.340 -08 000000062 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:42.341 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:42.341 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:42.341 -08 000000062 INF: ======================================
17-02-28 20:25:42.342 -08 000000102 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:42.342 -08 000000047 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:25:42.343 -08 000000083 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:25:42.343 -08 000000047 INF: ======================================
17-02-28 20:25:42.343 -08 000000102 INF: ======================================
17-02-28 20:25:42.343 -08 000000044 INF: ======================================
17-02-28 20:25:42.344 -08 000000083 INF: ======================================
17-02-28 20:25:42.345 -08 000000076 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:42.347 -08 000000076 INF: ======================================
17-02-28 20:25:42.348 -08 000000066 INF: ======================================
17-02-28 20:25:42.369 -08 000000073 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:25:42.369 -08 000000073 INF: X Motor: Xmit PR VI\n
17-02-28 20:25:42.431 -08 000000073 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:25:42.431 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:25:42.431 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:42.431 -08 000000073 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:25:42.431 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:42.431 -08 000000073 INF: X Motor: Moving to 88.5406 mm @15.000 mm/sec, started at 86.3145 mm
17-02-28 20:25:42.431 -08 000000073 INF: X Motor: Xmit MA 12100\n
17-02-28 20:25:42.491 -08 000000073 INF: X Motor: Recv MA 12100\r\n>
17-02-28 20:25:42.491 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:25:42.491 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:42.491 -08 000000073 INF: X Motor: WaitUntilStopped 60148
17-02-28 20:25:42.558 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:25:42.558 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:42.558 -08 000000039 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:25:42.558 -08 000000039 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:25:42.616 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:25:42.616 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:25:42.616 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:42.678 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:25:42.678 -08 000000039 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:25:42.678 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:42.805 -08 000000039 INF: Y Motor: Unshifted Position: 1076341
17-02-28 20:25:42.855 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:42.981 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:43.115 -08 000000039 INF: Y Motor: Unshifted Position: 1788031
17-02-28 20:25:43.116 -08 000000073 INF: X Motor: Xmit PR ER\n
17-02-28 20:25:43.165 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:43.181 -08 000000073 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:25:43.181 -08 000000073 INF: X Motor: Moved to 88.5410 after 690 ms
17-02-28 20:25:43.181 -08 000000073 INF: ======================================
17-02-28 20:25:43.290 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:43.429 -08 000000039 INF: Y Motor: Unshifted Position: 2566403
17-02-28 20:25:43.479 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:43.605 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:43.741 -08 000000039 INF: Y Motor: Unshifted Position: 3346337
17-02-28 20:25:43.791 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:43.915 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.051 -08 000000039 INF: Y Motor: Unshifted Position: 4121414
17-02-28 20:25:44.101 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.226 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.365 -08 000000039 INF: Y Motor: Unshifted Position: 4909695
17-02-28 20:25:44.415 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.541 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.676 -08 000000039 INF: Y Motor: Unshifted Position: 5683708
17-02-28 20:25:44.726 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.859 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:44.987 -08 000000039 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:25:44.987 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:44.987 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:45.053 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:25:45.053 -08 000000039 INF: Y Motor: Moved to 64.5335 after 2375 ms
17-02-28 20:25:45.053 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:45.112 -08 000000039 INF: Y Motor: Recv v 4096\r
17-02-28 20:25:45.112 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:45.112 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:45.174 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:25:45.174 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:45.174 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:45.239 -08 000000039 INF: Y Motor: Recv v 402653184\r
17-02-28 20:25:45.239 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:25:45.239 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:45.239 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:45.301 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:25:45.301 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:45.301 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:45.301 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:45.363 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:25:45.363 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:45.363 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:45.425 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:25:45.425 -08 000000039 INF: ======================================
17-02-28 20:25:45.427 -08 000000059 INF: ===================Move X,Y===================
17-02-28 20:25:45.428 -08 000000059 INF: ======================================
17-02-28 20:25:45.429 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:45.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:45.431 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:25:45.431 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:25:45.486 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:45.486 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:25:45.549 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:25:45.549 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:25:45.550 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:45.550 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:45.611 -08 000000047 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:25:45.611 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:25:45.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:45.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:45.613 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:25:45.614 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:25:45.614 -08 000000039 INF: ======================================
17-02-28 20:25:45.615 -08 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:25:45.615 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:25:45.618 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:25:45.619 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:25:45.619 -08 000000078 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:25:45.677 -08 000000074 INF: FPGA: Recv TDIYPOS
17-02-28 20:25:45.677 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:25:45.680 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:25:45.680 -08 000000078 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:25:45.735 -08 000000066 INF: FPGA: Recv TDIYARM2
17-02-28 20:25:45.736 -08 000000078 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:25:45.737 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:25:45.738 -08 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:25:45.739 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:25:45.740 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:25:45.741 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:25:45.742 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:46.109 -08 000000078 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:25:46.109 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:25:46.109 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:46.125 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:25:46.127 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:46.506 -08 000000078 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:25:46.506 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:25:46.506 -08 000000078 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:46.522 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:25:46.524 -08 000000078 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:25:46.525 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:25:46.528 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:46.529 -08 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:25:46.529 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:46.532 -08 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:25:46.532 -08 000000078 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:25:46.532 -08 000000078 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:25:46.532 -08 000000078 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:25:46.608 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:25:46.608 -08 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:25:46.608 -08 000000078 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:25:46.673 -08 000000087 INF: FPGA: Recv ZARM
17-02-28 20:25:46.673 -08 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.6982 ms
17-02-28 20:25:46.673 -08 000000078 INF: Z Motor: ArmAbsStepped took 140.8938 ms
17-02-28 20:25:46.673 -08 000000078 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:46.675 -08 000000078 INF: ===================TDI Scan Setup===================
17-02-28 20:25:46.676 -08 000000078 INF: ======================================
17-02-28 20:25:46.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:46.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:46.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:46.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:46.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:46.680 -08 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:25:46.680 -08 000000034 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:25:46.680 -08 000000034 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:25:46.680 -08 000000034 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:25:46.680 -08 000000064 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:25:46.681 -08 000000034 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:25:46.681 -08 000000064 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:25:46.681 -08 000000064 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:25:46.681 -08 000000064 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:25:46.685 -08 000000064 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:25:47.110 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:25:47.110 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:25:47.110 -08 000000064 INF: Excitation Filter 2: Moved -107 steps in 429.2041 ms
17-02-28 20:25:47.110 -08 000000034 INF: Excitation Filter 1: Moved -107 steps in 429.636 ms
17-02-28 20:25:47.110 -08 000000064 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 429.3737 ms
17-02-28 20:25:47.110 -08 000000064 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.5139 ms
17-02-28 20:25:47.110 -08 000000034 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.7889 ms
17-02-28 20:25:47.110 -08 000000034 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.9861 ms
17-02-28 20:25:47.111 -08 000000064 INF: ======================================
17-02-28 20:25:47.111 -08 000000034 INF: ======================================
17-02-28 20:25:47.112 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:47.114 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:47.115 -08 000000036 INF: ===================Serial===================
17-02-28 20:25:47.115 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:25:47.116 -08 000000033 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:47.116 -08 000000036 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:25:47.116 -08 000000104 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:47.116 -08 000000033 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:25:47.116 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:47.116 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:47.117 -08 000000066 INF: ===================Camera TDI, Parallel===================
17-02-28 20:25:47.117 -08 000000036 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:25:47.117 -08 000000104 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:25:47.118 -08 000000104 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:25:47.118 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:25:47.118 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:25:47.118 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.118 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.119 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.120 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.174 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:25:47.174 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:47.174 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:47.236 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:25:47.236 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:47.269 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.269 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.270 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.270 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.298 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:25:47.298 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:47.298 -08 000000033 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:25:47.298 -08 000000033 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:25:47.360 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:25:47.360 -08 000000033 INF: Y Motor: Start the move command
17-02-28 20:25:47.360 -08 000000033 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:47.419 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.419 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.420 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.420 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.422 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:25:47.422 -08 000000033 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:25:47.422 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:47.546 -08 000000033 INF: Y Motor: Unshifted Position: 5935380
17-02-28 20:25:47.569 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.569 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.570 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:47.570 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:47.596 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:47.719 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:25:47.719 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:25:47.719 -08 000000069 INF: ===================Camera #0 Frame #1===================
17-02-28 20:25:47.720 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:25:47.720 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:25:47.720 -08 000000045 INF: ===================Camera #2 Frame #1===================
17-02-28 20:25:47.722 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:47.858 -08 000000033 INF: Y Motor: Unshifted Position: 5888529
17-02-28 20:25:47.872 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:25:47.872 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:25:47.872 -08 000000069 INF: ===================Camera #0 Frame #3===================
17-02-28 20:25:47.873 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:25:47.873 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:25:47.873 -08 000000045 INF: ===================Camera #2 Frame #3===================
17-02-28 20:25:47.908 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:48.028 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:25:48.028 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:25:48.028 -08 000000069 INF: ===================Camera #0 Frame #4===================
17-02-28 20:25:48.030 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:25:48.030 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:25:48.030 -08 000000045 INF: ===================Camera #2 Frame #4===================
17-02-28 20:25:48.035 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:48.171 -08 000000033 INF: Y Motor: Unshifted Position: 5841569
17-02-28 20:25:48.181 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:48.181 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:48.181 -08 000000069 INF: ===================Camera #0 Frame #5===================
17-02-28 20:25:48.183 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:48.183 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:48.183 -08 000000045 INF: ===================Camera #2 Frame #5===================
17-02-28 20:25:48.221 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:48.231 -08 000000102 INF: FPGA: Recv ZWAIT 
17-02-28 20:25:48.231 -08 000000036 INF: ===================Serial===================
17-02-28 20:25:48.233 -08 000000036 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:25:48.233 -08 000000036 INF: ===================Serial===================
17-02-28 20:25:48.235 -08 000000036 INF: ======================================
17-02-28 20:25:48.293 -08 000000085 INF: FPGA: Recv TDIYWAIT
17-02-28 20:25:48.293 -08 000000104 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:48.295 -08 000000104 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:25:48.296 -08 000000060 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:25:48.296 -08 000000062 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:25:48.296 -08 000000060 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:25:48.296 -08 000000060 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:25:48.297 -08 000000060 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:25:48.297 -08 000000060 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:25:48.297 -08 000000062 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:25:48.297 -08 000000062 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:25:48.297 -08 000000062 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:25:48.303 -08 000000062 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:25:48.334 -08 000000069 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:25:48.334 -08 000000069 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:25:48.334 -08 000000069 INF: ===================Camera #0 Frame #6===================
17-02-28 20:25:48.337 -08 000000045 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:25:48.337 -08 000000045 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:25:48.337 -08 000000045 INF: ===================Camera #2 Frame #6===================
17-02-28 20:25:48.337 -08 000000069 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:25:48.338 -08 000000069 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:48.340 -08 000000045 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:25:48.341 -08 000000045 INF: ===================CameraTDI Cleanup===================
17-02-28 20:25:48.345 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:48.363 -08 000000069 INF: Camera #0 ReleaseBuffer
17-02-28 20:25:48.363 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:25:48.364 -08 000000069 INF: ======================================
17-02-28 20:25:48.392 -08 000000045 INF: Camera #2 ReleaseBuffer
17-02-28 20:25:48.392 -08 000000045 INF: ===================Camera TDI===================
17-02-28 20:25:48.394 -08 000000045 INF: ======================================
17-02-28 20:25:48.395 -08 000000066 INF: ===================Camera TDI===================
17-02-28 20:25:48.397 -08 000000066 INF: ======================================
17-02-28 20:25:48.484 -08 000000033 INF: Y Motor: Unshifted Position: 5797058
17-02-28 20:25:48.534 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:48.669 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:25:48.669 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:25:48.669 -08 000000060 INF: Excitation Filter 2: Moved 107 steps in 372.3256 ms
17-02-28 20:25:48.669 -08 000000062 INF: Excitation Filter 1: Moved 107 steps in 372.1849 ms
17-02-28 20:25:48.669 -08 000000062 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3887 ms
17-02-28 20:25:48.669 -08 000000062 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5046 ms
17-02-28 20:25:48.669 -08 000000060 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.5054 ms
17-02-28 20:25:48.669 -08 000000060 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.9228 ms
17-02-28 20:25:48.670 -08 000000062 INF: ======================================
17-02-28 20:25:48.670 -08 000000060 INF: ======================================
17-02-28 20:25:48.671 -08 000000033 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:25:48.671 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:48.671 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:48.671 -08 000000104 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:48.673 -08 000000104 INF: ======================================
17-02-28 20:25:48.733 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:25:48.733 -08 000000033 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-02-28 20:25:48.733 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:48.795 -08 000000033 INF: Y Motor: Recv v 4097\r
17-02-28 20:25:48.795 -08 000000033 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:48.795 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:48.857 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:25:48.857 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:48.857 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:48.919 -08 000000033 INF: Y Motor: Recv v 134217728\r
17-02-28 20:25:48.919 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:25:48.919 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:48.919 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:48.984 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:25:48.984 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:48.984 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:48.984 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:49.046 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:25:49.046 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:49.046 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:49.108 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:25:49.108 -08 000000033 INF: ======================================
17-02-28 20:25:49.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:49.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:25:49.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.111 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:25:49.168 -08 000000051 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:25:49.168 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:49.230 -08 000000074 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:25:49.230 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:25:49.292 -08 000000058 INF: FPGA: Recv ZADCR 2426
17-02-28 20:25:49.292 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:25:49.292 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:25:49.356 -08 000000090 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:25:49.357 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:25:49.357 -08 000000042 INF: TDIScan finished after 7034.3187 ms
17-02-28 20:25:49.357 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:25:49.357 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:25:49.357 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:25:49.416 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:25:49.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.417 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.418 -08 000000099 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:25:49.418 -08 000000066 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:25:49.419 -08 000000059 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:25:49.419 -08 000000099 INF: ======================================
17-02-28 20:25:49.419 -08 000000059 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:25:49.419 -08 000000059 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:25:49.419 -08 000000066 INF: ======================================
17-02-28 20:25:49.483 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:25:49.483 -08 000000059 INF: ======================================
17-02-28 20:25:49.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.485 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.486 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:25:49.529 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.529 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:25:49.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.554 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:25:49.579 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.579 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:25:49.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:25:49.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:49.610 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:49.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:25:49.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:49.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:25:49.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:25:50.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:25:50.326 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0851225633095896Best Z position at top surface = -0.158078785267054Best Z position at top surface + compensator offset = -0.135378785267054 C:3,L:8,T
17-02-28 20:25:50.327 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.158078785267054
17-02-28 20:25:50.327 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.96762
17-02-28 20:25:50.327 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0851225633095896
17-02-28 20:25:50.327 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.61641
17-02-28 20:25:50.327 -08 000000042 INF: Z-height at LaneTopSurface is -0.158078785267054.
17-02-28 20:25:50.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:50.460 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:25:50.460 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:25:50.478 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:50.478 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Focus Point 1===================
17-02-28 20:25:50.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.480 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.481 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.481 -08 000000077 INF: ===================Move Tilt Motor 1===================
17-02-28 20:25:50.481 -08 000000034 INF: ===================Move Tilt Motor 3===================
17-02-28 20:25:50.482 -08 000000047 INF: ===================Move Tilt Motor 2===================
17-02-28 20:25:50.482 -08 000000077 INF: Tilt Motor 1: Moving to 4.9405 mm, started at 4.9426 mm, delta = -0.0020 mm
17-02-28 20:25:50.482 -08 000000077 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:50.482 -08 000000047 INF: Tilt Motor 2: Moving to 5.5628 mm, started at 5.5598 mm, delta = 0.0030 mm
17-02-28 20:25:50.482 -08 000000034 INF: Tilt Motor 3: Moving to 5.5092 mm, started at 5.5052 mm, delta = 0.0040 mm
17-02-28 20:25:50.483 -08 000000047 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:50.485 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:50.540 -08 000000095 INF: FPGA: Recv T1RD 19458
17-02-28 20:25:50.540 -08 000000095 INF: FPGA: Recv T2RD 21889
17-02-28 20:25:50.540 -08 000000095 INF: FPGA: Recv T3RD 21673
17-02-28 20:25:50.540 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3612 + 1/6
17-02-28 20:25:50.540 -08 000000034 INF: Tilt Motor 3: Moving to 21690 encoder counts
17-02-28 20:25:50.540 -08 000000034 INF: FPGA: Xmit T3MOVETO 21690\n
17-02-28 20:25:50.540 -08 000000047 INF: Tilt Motor 2: Encoder: at motor step 3648 + 1/6
17-02-28 20:25:50.540 -08 000000047 INF: Tilt Motor 2: Moving to 21901 encoder counts
17-02-28 20:25:50.541 -08 000000047 INF: FPGA: Xmit T2MOVETO 21901\n
17-02-28 20:25:50.541 -08 000000077 INF: Tilt Motor 1: Encoder: at motor step 3243 + 0/6
17-02-28 20:25:50.541 -08 000000077 INF: Tilt Motor 1: Moving to 19451 encoder counts
17-02-28 20:25:50.542 -08 000000077 INF: FPGA: Xmit T1MOVETO 19451\n
17-02-28 20:25:50.664 -08 000000036 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:25:50.664 -08 000000036 INF: FPGA: Recv T3MOVETO 2
17-02-28 20:25:50.664 -08 000000036 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:25:50.664 -08 000000077 INF: Tilt Motor 1: To move from 4.942 to 4.941 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:25:50.664 -08 000000047 INF: Tilt Motor 2: To move from 5.560 to 5.563 (0.003 mm) should take 2 steps, but required 1 steps (0.002 mm). Slippage = -0.002 mm (-0.51%)
17-02-28 20:25:50.664 -08 000000077 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:50.664 -08 000000034 INF: Tilt Motor 3: To move from 5.505 to 5.509 (0.004 mm) should take 3 steps, but required 2 steps (0.003 mm). Slippage = -0.002 mm (-0.38%)
17-02-28 20:25:50.665 -08 000000047 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:50.667 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:50.729 -08 000000069 INF: FPGA: Recv T1RD 19453
17-02-28 20:25:50.729 -08 000000069 INF: FPGA: Recv T2RD 21895
17-02-28 20:25:50.729 -08 000000069 INF: FPGA: Recv T3RD 21687
17-02-28 20:25:50.729 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3614 + 3/6
17-02-28 20:25:50.729 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:50.729 -08 000000077 INF: Tilt Motor 1: Encoder: at motor step 3242 + 1/6
17-02-28 20:25:50.729 -08 000000047 INF: Tilt Motor 2: Encoder: at motor step 3649 + 1/6
17-02-28 20:25:50.730 -08 000000047 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:50.732 -08 000000077 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:50.791 -08 000000102 INF: FPGA: Recv T3RD 21687
17-02-28 20:25:50.791 -08 000000102 INF: FPGA: Recv T2RD 21895
17-02-28 20:25:50.791 -08 000000102 INF: FPGA: Recv T1RD 19453
17-02-28 20:25:50.791 -08 000000077 INF: Tilt Motor 1: Encoder: at motor step 3242 + 1/6
17-02-28 20:25:50.791 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3614 + 3/6
17-02-28 20:25:50.791 -08 000000047 INF: Tilt Motor 2: Encoder: at motor step 3649 + 1/6
17-02-28 20:25:50.791 -08 000000077 INF: FPGA: Xmit T1RD\n
17-02-28 20:25:50.792 -08 000000034 INF: FPGA: Xmit T3RD\n
17-02-28 20:25:50.794 -08 000000047 INF: FPGA: Xmit T2RD\n
17-02-28 20:25:50.853 -08 000000073 INF: FPGA: Recv T1RD 19453
17-02-28 20:25:50.853 -08 000000073 INF: FPGA: Recv T3RD 21687
17-02-28 20:25:50.853 -08 000000073 INF: FPGA: Recv T2RD 21895
17-02-28 20:25:50.853 -08 000000047 INF: Tilt Motor 2: Encoder: at motor step 3649 + 1/6
17-02-28 20:25:50.853 -08 000000077 INF: Tilt Motor 1: Encoder: at motor step 3242 + 1/6
17-02-28 20:25:50.853 -08 000000034 INF: Tilt Motor 3: Encoder: at motor step 3614 + 3/6
17-02-28 20:25:50.853 -08 000000047 INF: Tilt Motor 2: After move to 5.5628, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:50.853 -08 000000077 INF: Tilt Motor 1: After move to 4.9405, error = 0.0005, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:50.853 -08 000000034 INF: Tilt Motor 3: After move to 5.5092, error = -0.0007, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:50.853 -08 000000047 INF: Tilt Motor 2: Moved to 5.5613 after 371.4113 ms
17-02-28 20:25:50.853 -08 000000034 INF: Tilt Motor 3: Moved to 5.5085 after 371.2144 ms
17-02-28 20:25:50.853 -08 000000077 INF: Tilt Motor 1: Moved to 4.9411 after 371.4683 ms
17-02-28 20:25:50.853 -08 000000047 INF: ======================================
17-02-28 20:25:50.854 -08 000000034 INF: ======================================
17-02-28 20:25:50.854 -08 000000077 INF: ======================================
17-02-28 20:25:50.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.855 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.856 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.94054897397114, m2=5.56278608206225, m3=5.50919208206225
17-02-28 20:25:50.856 -08 000000042 INF: ETF Best Z: -0.1353788 mm (35488 DAC)
17-02-28 20:25:50.856 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.857 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:50.857 -08 000000042 INF: Compensator: Moving IntoPath
17-02-28 20:25:50.857 -08 000000042 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:25:51.293 -08 000000054 INF: FPGA: Recv MIOCOMPF
17-02-28 20:25:51.293 -08 000000042 INF: Compensator: Moved IntoPath in 436 ms
17-02-28 20:25:51.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:51.295 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:25:51.301 -08 000000042 INF: Swath 1 position calculated to be: {X=87.98663, Y=39.76308} from estimated center X= 88.50199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:25:51.301 -08 000000042 INF: Swath 2 position calculated to be: {X=89.09464, Y=39.76308} from estimated center X= 88.50199, Y= 39.77999 on surface LaneTopSurface
17-02-28 20:25:51.307 -08 000000042 INF: Swath 0: Converted transform from (61.22073, -13.89049) pixels to (0.021045, -0.00483) mm.
17-02-28 20:25:51.313 -08 000000042 INF: Swath 1: Converted transform from (29.91166, -5.802944) pixels to (0.01035, -0.00207) mm.
17-02-28 20:25:51.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:25:51.313 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:25:51.314 -08 000000042 INF: Transformed XStagePosition from 87.98663 mm to 88.0076783001423 mm.
17-02-28 20:25:51.325 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.548259355478 mm.
17-02-28 20:25:51.325 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.348259355478 mm.
17-02-28 20:25:51.325 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.439009355478 mm.
17-02-28 20:25:51.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:51.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:25:51.328 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:51.328 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:25:51.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:51.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:51.337 -08 000000060 INF: ===================MoveEmissionFilters===================
17-02-28 20:25:51.337 -08 000000064 INF: ===================Move X,Y===================
17-02-28 20:25:51.338 -08 000000047 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:51.338 -08 000000064 INF: ===================Move X,Y, Parallel===================
17-02-28 20:25:51.338 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:51.338 -08 000000047 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:25:51.338 -08 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:51.338 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:51.338 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:51.339 -08 000000099 INF: ===================Move X Motor without settling===================
17-02-28 20:25:51.339 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:51.339 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:51.339 -08 000000099 INF: X Motor: Xmit PR VM\n
17-02-28 20:25:51.339 -08 000000091 INF: Y Motor: Moving to 64.5483 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:25:51.339 -08 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:51.339 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:25:51.339 -08 000000047 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:25:51.339 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:25:51.340 -08 000000047 INF: Z Motor: Moving to -0.1554 mm, started at -0.0100 mm
17-02-28 20:25:51.340 -08 000000047 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:25:51.340 -08 000000062 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:25:51.340 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:25:51.340 -08 000000072 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:25:51.340 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:51.340 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:51.341 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:25:51.341 -08 000000108 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:25:51.341 -08 000000037 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:25:51.341 -08 000000058 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:25:51.341 -08 000000072 INF: ======================================
17-02-28 20:25:51.341 -08 000000058 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:25:51.341 -08 000000037 INF: ======================================
17-02-28 20:25:51.341 -08 000000085 INF: ======================================
17-02-28 20:25:51.341 -08 000000058 INF: ======================================
17-02-28 20:25:51.342 -08 000000030 INF: ======================================
17-02-28 20:25:51.342 -08 000000108 INF: ======================================
17-02-28 20:25:51.343 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:25:51.343 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:25:51.343 -08 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:25:51.343 -08 000000062 INF: ======================================
17-02-28 20:25:51.344 -08 000000045 INF: ======================================
17-02-28 20:25:51.344 -08 000000034 INF: ======================================
17-02-28 20:25:51.344 -08 000000069 INF: ======================================
17-02-28 20:25:51.345 -08 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:25:51.345 -08 000000104 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:25:51.346 -08 000000023 INF: ======================================
17-02-28 20:25:51.347 -08 000000104 INF: ======================================
17-02-28 20:25:51.347 -08 000000060 INF: ======================================
17-02-28 20:25:51.352 -08 000000036 INF: FPGA: Recv ZTRG 
17-02-28 20:25:51.352 -08 000000047 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:25:51.416 -08 000000099 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:25:51.416 -08 000000099 INF: X Motor: Xmit PR VI\n
17-02-28 20:25:51.416 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:51.416 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:51.416 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:51.416 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:25:51.416 -08 000000047 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:25:51.417 -08 000000047 INF: FPGA: Xmit ZMV 40731\n
17-02-28 20:25:51.476 -08 000000078 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:25:51.476 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:25:51.478 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:51.478 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:51.480 -08 000000099 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:25:51.480 -08 000000099 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:25:51.480 -08 000000099 INF: X Motor: Moving to 88.0077 mm @15.000 mm/sec, started at 88.5410 mm
17-02-28 20:25:51.480 -08 000000099 INF: X Motor: Xmit MA 11882\n
17-02-28 20:25:51.540 -08 000000099 INF: X Motor: Recv MA 11882\r\n>
17-02-28 20:25:51.540 -08 000000099 INF: X Motor: WaitUntilStopped 60036
17-02-28 20:25:51.541 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:25:51.541 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:51.541 -08 000000091 INF: Y Motor: Set target position to 5954826 encoder counts
17-02-28 20:25:51.541 -08 000000091 INF: Y Motor: Xmit s r0xca 5954826\r
17-02-28 20:25:51.600 -08 000000102 INF: FPGA: Recv ZMV 
17-02-28 20:25:51.600 -08 000000047 INF: Z Motor: MoveAndTrigger 'ZMV' command took 183.5488 ms
17-02-28 20:25:51.600 -08 000000047 INF: FPGA: Xmit ZDACR\n
17-02-28 20:25:51.602 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:51.602 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:25:51.602 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:51.665 -08 000000036 INF: FPGA: Recv ZDACR 40731
17-02-28 20:25:51.665 -08 000000047 INF: Z Motor: MoveAndTrigger took 325.5656 ms w/comms
17-02-28 20:25:51.665 -08 000000047 INF: Z Motor: After move to -0.1554, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:25:51.665 -08 000000047 INF: Z Motor: MoveAbsStepped took 325.7613 ms
17-02-28 20:25:51.666 -08 000000047 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:51.667 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:51.667 -08 000000091 INF: Y Motor: WaitUntilStopped 60063
17-02-28 20:25:51.667 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:51.667 -08 000000047 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:25:51.668 -08 000000054 INF: ===================Camera Arm TDI===================
17-02-28 20:25:51.668 -08 000000034 INF: ===================TDI Scan Setup===================
17-02-28 20:25:51.669 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:51.669 -08 000000034 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:51.670 -08 000000054 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:51.670 -08 000000034 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:25:51.670 -08 000000034 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:51.670 -08 000000034 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:25:51.727 -08 000000102 INF: FPGA: Recv ZSEL 
17-02-28 20:25:51.728 -08 000000034 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:51.728 -08 000000034 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:25:51.791 -08 000000091 INF: Y Motor: Unshifted Position: 5881808
17-02-28 20:25:51.791 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:25:51.792 -08 000000034 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:25:51.793 -08 000000034 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:25:51.793 -08 000000034 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:51.795 -08 000000034 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:25:51.795 -08 000000034 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:25:51.795 -08 000000034 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:25:51.841 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:51.851 -08 000000037 INF: FPGA: Recv ZSTEP 
17-02-28 20:25:51.851 -08 000000034 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:51.853 -08 000000034 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:25:51.853 -08 000000034 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:51.855 -08 000000034 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:25:51.855 -08 000000034 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:25:51.855 -08 000000034 INF: Z Motor: Arming to move to -0.1154 mm
17-02-28 20:25:51.855 -08 000000034 INF: FPGA: Xmit ZYT 6434826 4\n
17-02-28 20:25:51.913 -08 000000051 INF: FPGA: Recv ZYT 
17-02-28 20:25:51.913 -08 000000034 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381808 enc / 63.818 mm / ) = 6434826 enc / 64.348 mm
17-02-28 20:25:51.913 -08 000000034 INF: FPGA: Xmit ZARM 30245\n
17-02-28 20:25:51.965 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:51.975 -08 000000083 INF: FPGA: Recv ZARM
17-02-28 20:25:51.975 -08 000000034 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9108 ms
17-02-28 20:25:51.975 -08 000000034 INF: Z Motor: ArmAbsStepped took 119.8622 ms
17-02-28 20:25:51.975 -08 000000034 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:25:51.976 -08 000000034 INF: ===================TDI Scan Setup===================
17-02-28 20:25:51.977 -08 000000099 INF: X Motor: Xmit PR ER\n
17-02-28 20:25:51.978 -08 000000034 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:25:51.978 -08 000000034 INF: ===================TDI Scan Setup===================
17-02-28 20:25:51.980 -08 000000034 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:25:51.980 -08 000000034 INF: ===================TDI Scan Setup===================
17-02-28 20:25:51.981 -08 000000034 INF: ======================================
17-02-28 20:25:52.039 -08 000000099 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:25:52.039 -08 000000099 INF: X Motor: Moved to 88.0088 after 499 ms
17-02-28 20:25:52.039 -08 000000099 INF: ======================================
17-02-28 20:25:52.101 -08 000000091 INF: Y Motor: Unshifted Position: 5954828
17-02-28 20:25:52.101 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:25:52.101 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:52.166 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:25:52.166 -08 000000091 INF: Y Motor: Moved to 64.5483 after 499 ms
17-02-28 20:25:52.166 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:25:52.228 -08 000000091 INF: Y Motor: Recv v 4096\r
17-02-28 20:25:52.228 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:25:52.228 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:52.290 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:25:52.290 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:52.290 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:25:52.352 -08 000000091 INF: Y Motor: Recv v 402653184\r
17-02-28 20:25:52.352 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:25:52.352 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:25:52.352 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:25:52.414 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:25:52.414 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:25:52.414 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:25:52.414 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:52.476 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:52.476 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:25:52.476 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:52.538 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:25:52.538 -08 000000091 INF: ======================================
17-02-28 20:25:52.539 -08 000000064 INF: ===================Move X,Y===================
17-02-28 20:25:52.540 -08 000000064 INF: ======================================
17-02-28 20:25:52.648 -08 000000054 INF: Camera #0 AttachBuffer (imageDataPtr = 56915988528 imgPtr = 56915988528 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:25:52.648 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:25:52.648 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:52.663 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:52.665 -08 000000054 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:25:53.736 -08 000000054 INF: Camera #2 AttachBuffer (imageDataPtr = 58727927856 imgPtr = 59633897520 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:25:53.736 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:25:53.736 -08 000000054 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:25:53.751 -08 000000054 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:25:53.753 -08 000000054 INF: ===================Camera Arm TDI===================
17-02-28 20:25:53.754 -08 000000054 INF: ======================================
17-02-28 20:25:53.755 -08 000000047 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:25:53.756 -08 000000047 INF: ======================================
17-02-28 20:25:53.757 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:25:53.758 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:53.758 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:25:53.758 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:25:53.851 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:25:53.851 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:25:53.911 -08 000000091 INF: FPGA: Recv ZFREQCL
17-02-28 20:25:53.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:25:53.911 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:53.912 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:25:53.973 -08 000000064 INF: FPGA: Recv TDIYERD 6454827
17-02-28 20:25:53.973 -08 000000042 INF: Before scan, Y encoder from FPGA = 6454827 counts (64.548 mm)
17-02-28 20:25:53.973 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:53.974 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:53.975 -08 000000087 INF: ===================TDI FPGA Arm===================
17-02-28 20:25:53.975 -08 000000069 INF: ===================Set YMotor gains for scans===================
17-02-28 20:25:53.975 -08 000000069 INF: ======================================
17-02-28 20:25:53.975 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:53.976 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:25:53.976 -08 000000087 INF: FPGA: Xmit TDIYPOS 6343901\n
17-02-28 20:25:54.035 -08 000000039 INF: FPGA: Recv TDIYPOS
17-02-28 20:25:54.035 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:54.036 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:25:54.037 -08 000000087 INF: FPGA: Xmit TDIYARM3 139264 6434826 1 1\n
17-02-28 20:25:54.097 -08 000000059 INF: FPGA: Recv TDIYARM3
17-02-28 20:25:54.097 -08 000000087 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:25:54.098 -08 000000087 INF: ===================TDI FPGA Arm===================
17-02-28 20:25:54.099 -08 000000087 INF: ======================================
17-02-28 20:25:54.100 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:25:54.101 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:25:54.101 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:54.101 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:54.102 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:54.103 -08 000000037 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:25:54.103 -08 000000054 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:25:54.103 -08 000000037 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:25:54.103 -08 000000037 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:25:54.103 -08 000000037 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:25:54.103 -08 000000054 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:25:54.103 -08 000000054 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:25:54.103 -08 000000054 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:25:54.103 -08 000000037 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:25:54.104 -08 000000054 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:25:54.472 -08 000000059 INF: FPGA: Recv EX2MV
17-02-28 20:25:54.472 -08 000000059 INF: FPGA: Recv EX1MV
17-02-28 20:25:54.472 -08 000000054 INF: Excitation Filter 1: Moved -107 steps in 368.8528 ms
17-02-28 20:25:54.472 -08 000000037 INF: Excitation Filter 2: Moved -107 steps in 369.0295 ms
17-02-28 20:25:54.472 -08 000000054 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.9733 ms
17-02-28 20:25:54.472 -08 000000037 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.1196 ms
17-02-28 20:25:54.472 -08 000000037 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.2222 ms
17-02-28 20:25:54.472 -08 000000054 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.0835 ms
17-02-28 20:25:54.472 -08 000000037 INF: ======================================
17-02-28 20:25:54.472 -08 000000054 INF: ======================================
17-02-28 20:25:54.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:54.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:25:54.475 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:25:54.475 -08 000000030 INF: ===================FPGA Z Wait===================
17-02-28 20:25:54.476 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:25:54.476 -08 000000072 INF: ===================Move Y Motor without settling===================
17-02-28 20:25:54.476 -08 000000030 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:25:54.476 -08 000000072 INF: Y Motor: Moving to 14.8999 mm @6.500 mm/sec, started at 64.5483 mm
17-02-28 20:25:54.476 -08 000000072 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:25:54.476 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:25:54.476 -08 000000102 INF: ===================Camera TDI, Parallel===================
17-02-28 20:25:54.476 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:25:54.477 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:25:54.477 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:25:54.477 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:25:54.478 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:54.478 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:54.481 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:54.481 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:54.536 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:25:54.536 -08 000000072 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:25:54.536 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:25:54.598 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:25:54.598 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:25:54.628 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:54.628 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:54.631 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:54.631 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:54.660 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:25:54.660 -08 000000072 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:25:54.660 -08 000000072 INF: Y Motor: Set target position to 989992 encoder counts
17-02-28 20:25:54.660 -08 000000072 INF: Y Motor: Xmit s r0xca 989992\r
17-02-28 20:25:54.722 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:25:54.722 -08 000000072 INF: Y Motor: Start the move command
17-02-28 20:25:54.722 -08 000000072 INF: Y Motor: Xmit t 1\r
17-02-28 20:25:54.778 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:54.778 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:54.781 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:25:54.781 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:25:54.784 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:25:54.784 -08 000000072 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:25:54.784 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:54.847 -08 000000089 INF: FPGA: Recv ZWAIT 
17-02-28 20:25:54.847 -08 000000030 INF: ======================================
17-02-28 20:25:54.911 -08 000000072 INF: Y Motor: Unshifted Position: 5891019
17-02-28 20:25:54.928 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:54.928 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:54.928 -08 000000035 INF: ===================Camera #2 Frame #5===================
17-02-28 20:25:54.931 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:25:54.931 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:25:54.931 -08 000000033 INF: ===================Camera #0 Frame #5===================
17-02-28 20:25:54.961 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.085 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.095 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:25:55.095 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:25:55.095 -08 000000035 INF: ===================Camera #2 Frame #11===================
17-02-28 20:25:55.098 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:25:55.098 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:25:55.098 -08 000000033 INF: ===================Camera #0 Frame #11===================
17-02-28 20:25:55.223 -08 000000072 INF: Y Motor: Unshifted Position: 5689308
17-02-28 20:25:55.265 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:25:55.265 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:25:55.265 -08 000000035 INF: ===================Camera #2 Frame #17===================
17-02-28 20:25:55.268 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:25:55.268 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:25:55.268 -08 000000033 INF: ===================Camera #0 Frame #17===================
17-02-28 20:25:55.273 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.398 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.436 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:25:55.436 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:25:55.436 -08 000000035 INF: ===================Camera #2 Frame #23===================
17-02-28 20:25:55.438 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:25:55.438 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:25:55.438 -08 000000033 INF: ===================Camera #0 Frame #23===================
17-02-28 20:25:55.534 -08 000000072 INF: Y Motor: Unshifted Position: 5485864
17-02-28 20:25:55.584 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.607 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:25:55.607 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:25:55.607 -08 000000035 INF: ===================Camera #2 Frame #30===================
17-02-28 20:25:55.608 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:25:55.608 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:25:55.608 -08 000000033 INF: ===================Camera #0 Frame #30===================
17-02-28 20:25:55.708 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.781 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:25:55.781 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:25:55.781 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:25:55.781 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:25:55.781 -08 000000033 INF: ===================Camera #0 Frame #36===================
17-02-28 20:25:55.781 -08 000000035 INF: ===================Camera #2 Frame #36===================
17-02-28 20:25:55.847 -08 000000072 INF: Y Motor: Unshifted Position: 5282194
17-02-28 20:25:55.897 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:55.951 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:25:55.951 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:25:55.951 -08 000000033 INF: ===================Camera #0 Frame #42===================
17-02-28 20:25:55.952 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:25:55.952 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:25:55.952 -08 000000035 INF: ===================Camera #2 Frame #42===================
17-02-28 20:25:56.021 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.121 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:25:56.121 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:25:56.121 -08 000000033 INF: ===================Camera #0 Frame #48===================
17-02-28 20:25:56.123 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:25:56.123 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:25:56.123 -08 000000035 INF: ===================Camera #2 Frame #49===================
17-02-28 20:25:56.157 -08 000000072 INF: Y Motor: Unshifted Position: 5080472
17-02-28 20:25:56.207 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.289 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:25:56.289 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:25:56.289 -08 000000033 INF: ===================Camera #0 Frame #55===================
17-02-28 20:25:56.296 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:25:56.296 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:25:56.296 -08 000000035 INF: ===================Camera #2 Frame #55===================
17-02-28 20:25:56.335 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.462 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:25:56.462 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:25:56.462 -08 000000033 INF: ===================Camera #0 Frame #61===================
17-02-28 20:25:56.465 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:25:56.465 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:25:56.465 -08 000000035 INF: ===================Camera #2 Frame #61===================
17-02-28 20:25:56.471 -08 000000072 INF: Y Motor: Unshifted Position: 4877024
17-02-28 20:25:56.521 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.630 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:25:56.630 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:25:56.630 -08 000000033 INF: ===================Camera #0 Frame #67===================
17-02-28 20:25:56.634 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:25:56.634 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:25:56.634 -08 000000035 INF: ===================Camera #2 Frame #67===================
17-02-28 20:25:56.645 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.784 -08 000000072 INF: Y Motor: Unshifted Position: 4673570
17-02-28 20:25:56.798 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:25:56.798 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:25:56.798 -08 000000033 INF: ===================Camera #0 Frame #73===================
17-02-28 20:25:56.798 -08 000000078 INF: RunCopyService queue size at 2/28/2017 8:25:56 PM is 2
17-02-28 20:25:56.803 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:25:56.803 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:25:56.803 -08 000000035 INF: ===================Camera #2 Frame #74===================
17-02-28 20:25:56.834 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.959 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:56.966 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:25:56.966 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:25:56.966 -08 000000033 INF: ===================Camera #0 Frame #80===================
17-02-28 20:25:56.976 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:25:56.976 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:25:56.976 -08 000000035 INF: ===================Camera #2 Frame #80===================
17-02-28 20:25:57.097 -08 000000072 INF: Y Motor: Unshifted Position: 4471197
17-02-28 20:25:57.138 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:25:57.138 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:25:57.138 -08 000000033 INF: ===================Camera #0 Frame #86===================
17-02-28 20:25:57.145 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:25:57.145 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:25:57.145 -08 000000035 INF: ===================Camera #2 Frame #86===================
17-02-28 20:25:57.147 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:57.271 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:57.307 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:25:57.307 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:25:57.307 -08 000000033 INF: ===================Camera #0 Frame #92===================
17-02-28 20:25:57.314 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:25:57.314 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:25:57.314 -08 000000035 INF: ===================Camera #2 Frame #92===================
17-02-28 20:25:57.408 -08 000000072 INF: Y Motor: Unshifted Position: 4266883
17-02-28 20:25:57.458 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:57.476 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:25:57.476 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:25:57.476 -08 000000033 INF: ===================Camera #0 Frame #98===================
17-02-28 20:25:57.483 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:25:57.483 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:25:57.483 -08 000000035 INF: ===================Camera #2 Frame #99===================
17-02-28 20:25:57.582 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:57.645 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:25:57.645 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:25:57.645 -08 000000033 INF: ===================Camera #0 Frame #105===================
17-02-28 20:25:57.656 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:25:57.656 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:25:57.656 -08 000000035 INF: ===================Camera #2 Frame #105===================
17-02-28 20:25:57.719 -08 000000072 INF: Y Motor: Unshifted Position: 4065374
17-02-28 20:25:57.769 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:57.817 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:25:57.817 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:25:57.817 -08 000000033 INF: ===================Camera #0 Frame #111===================
17-02-28 20:25:57.825 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:25:57.825 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:25:57.825 -08 000000035 INF: ===================Camera #2 Frame #111===================
17-02-28 20:25:57.893 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:57.986 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:25:57.986 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:25:57.986 -08 000000033 INF: ===================Camera #0 Frame #117===================
17-02-28 20:25:57.994 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:25:57.994 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:25:57.994 -08 000000035 INF: ===================Camera #2 Frame #117===================
17-02-28 20:25:58.032 -08 000000072 INF: Y Motor: Unshifted Position: 3861704
17-02-28 20:25:58.082 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:58.155 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:25:58.155 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:25:58.155 -08 000000033 INF: ===================Camera #0 Frame #123===================
17-02-28 20:25:58.163 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:25:58.163 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:25:58.163 -08 000000035 INF: ===================Camera #2 Frame #124===================
17-02-28 20:25:58.206 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:58.324 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:25:58.324 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:25:58.324 -08 000000033 INF: ===================Camera #0 Frame #130===================
17-02-28 20:25:58.336 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:25:58.336 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:25:58.336 -08 000000035 INF: ===================Camera #2 Frame #130===================
17-02-28 20:25:58.344 -08 000000072 INF: Y Motor: Unshifted Position: 3658909
17-02-28 20:25:58.394 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:58.496 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:25:58.496 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:25:58.496 -08 000000033 INF: ===================Camera #0 Frame #136===================
17-02-28 20:25:58.505 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:25:58.505 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:25:58.505 -08 000000035 INF: ===================Camera #2 Frame #136===================
17-02-28 20:25:58.520 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:58.656 -08 000000072 INF: Y Motor: Unshifted Position: 3455890
17-02-28 20:25:58.665 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:25:58.665 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:25:58.665 -08 000000033 INF: ===================Camera #0 Frame #142===================
17-02-28 20:25:58.674 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:25:58.674 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:25:58.674 -08 000000035 INF: ===================Camera #2 Frame #142===================
17-02-28 20:25:58.706 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:58.832 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:58.834 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:25:58.834 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:25:58.834 -08 000000033 INF: ===================Camera #0 Frame #148===================
17-02-28 20:25:58.843 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:25:58.843 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:25:58.843 -08 000000035 INF: ===================Camera #2 Frame #149===================
17-02-28 20:25:58.968 -08 000000072 INF: Y Motor: Unshifted Position: 3252877
17-02-28 20:25:59.003 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:25:59.003 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:25:59.003 -08 000000033 INF: ===================Camera #0 Frame #155===================
17-02-28 20:25:59.016 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:25:59.016 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:25:59.016 -08 000000035 INF: ===================Camera #2 Frame #155===================
17-02-28 20:25:59.018 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:59.142 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:59.174 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:25:59.174 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:25:59.174 -08 000000033 INF: ===================Camera #0 Frame #161===================
17-02-28 20:25:59.186 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:25:59.186 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:25:59.186 -08 000000035 INF: ===================Camera #2 Frame #161===================
17-02-28 20:25:59.278 -08 000000072 INF: Y Motor: Unshifted Position: 3051386
17-02-28 20:25:59.328 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:59.342 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:25:59.342 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:25:59.342 -08 000000033 INF: ===================Camera #0 Frame #167===================
17-02-28 20:25:59.356 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:25:59.356 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:25:59.356 -08 000000035 INF: ===================Camera #2 Frame #168===================
17-02-28 20:25:59.456 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:59.512 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:25:59.512 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:25:59.512 -08 000000033 INF: ===================Camera #0 Frame #173===================
17-02-28 20:25:59.530 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:25:59.530 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:25:59.530 -08 000000035 INF: ===================Camera #2 Frame #174===================
17-02-28 20:25:59.592 -08 000000072 INF: Y Motor: Unshifted Position: 2847284
17-02-28 20:25:59.642 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:59.682 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:25:59.682 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:25:59.682 -08 000000033 INF: ===================Camera #0 Frame #180===================
17-02-28 20:25:59.701 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:25:59.701 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:25:59.701 -08 000000035 INF: ===================Camera #2 Frame #180===================
17-02-28 20:25:59.768 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:25:59.855 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:25:59.855 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:25:59.855 -08 000000033 INF: ===================Camera #0 Frame #186===================
17-02-28 20:25:59.871 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:25:59.871 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:25:59.871 -08 000000035 INF: ===================Camera #2 Frame #187===================
17-02-28 20:25:59.902 -08 000000072 INF: Y Motor: Unshifted Position: 2645574
17-02-28 20:25:59.952 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.025 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:26:00.025 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:26:00.025 -08 000000033 INF: ===================Camera #0 Frame #192===================
17-02-28 20:26:00.044 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:26:00.044 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:26:00.044 -08 000000035 INF: ===================Camera #2 Frame #193===================
17-02-28 20:26:00.080 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.195 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:26:00.195 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:26:00.195 -08 000000033 INF: ===================Camera #0 Frame #198===================
17-02-28 20:26:00.214 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:26:00.214 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:26:00.214 -08 000000035 INF: ===================Camera #2 Frame #199===================
17-02-28 20:26:00.218 -08 000000072 INF: Y Motor: Unshifted Position: 2441473
17-02-28 20:26:00.268 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.365 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:26:00.365 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:26:00.365 -08 000000033 INF: ===================Camera #0 Frame #205===================
17-02-28 20:26:00.384 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:26:00.384 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:26:00.384 -08 000000035 INF: ===================Camera #2 Frame #205===================
17-02-28 20:26:00.392 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.526 -08 000000072 INF: Y Motor: Unshifted Position: 2238459
17-02-28 20:26:00.538 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:26:00.538 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:26:00.538 -08 000000033 INF: ===================Camera #0 Frame #211===================
17-02-28 20:26:00.555 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:26:00.555 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:26:00.555 -08 000000035 INF: ===================Camera #2 Frame #212===================
17-02-28 20:26:00.576 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.704 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.708 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:26:00.708 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:26:00.708 -08 000000033 INF: ===================Camera #0 Frame #217===================
17-02-28 20:26:00.729 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:26:00.729 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:26:00.729 -08 000000035 INF: ===================Camera #2 Frame #218===================
17-02-28 20:26:00.838 -08 000000072 INF: Y Motor: Unshifted Position: 2036311
17-02-28 20:26:00.878 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:26:00.878 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:26:00.878 -08 000000033 INF: ===================Camera #0 Frame #224===================
17-02-28 20:26:00.888 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:00.900 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:26:00.900 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:26:00.900 -08 000000035 INF: ===================Camera #2 Frame #224===================
17-02-28 20:26:01.016 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:01.051 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:26:01.051 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:26:01.051 -08 000000033 INF: ===================Camera #0 Frame #230===================
17-02-28 20:26:01.071 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:26:01.071 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:26:01.071 -08 000000035 INF: ===================Camera #2 Frame #231===================
17-02-28 20:26:01.152 -08 000000072 INF: Y Motor: Unshifted Position: 1832631
17-02-28 20:26:01.202 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:01.221 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:26:01.221 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:26:01.221 -08 000000033 INF: ===================Camera #0 Frame #236===================
17-02-28 20:26:01.245 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:26:01.245 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:26:01.245 -08 000000035 INF: ===================Camera #2 Frame #237===================
17-02-28 20:26:01.326 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:01.391 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:26:01.391 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:26:01.391 -08 000000033 INF: ===================Camera #0 Frame #242===================
17-02-28 20:26:01.416 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:26:01.416 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:26:01.416 -08 000000035 INF: ===================Camera #2 Frame #243===================
17-02-28 20:26:01.462 -08 000000072 INF: Y Motor: Unshifted Position: 1631135
17-02-28 20:26:01.512 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:01.560 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:26:01.560 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:26:01.560 -08 000000033 INF: ===================Camera #0 Frame #249===================
17-02-28 20:26:01.587 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:26:01.587 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:26:01.587 -08 000000035 INF: ===================Camera #2 Frame #250===================
17-02-28 20:26:01.639 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:01.733 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:26:01.733 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:26:01.733 -08 000000033 INF: ===================Camera #0 Frame #255===================
17-02-28 20:26:01.761 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:26:01.761 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:26:01.761 -08 000000035 INF: ===================Camera #2 Frame #256===================
17-02-28 20:26:01.775 -08 000000072 INF: Y Motor: Unshifted Position: 1427468
17-02-28 20:26:01.825 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:01.903 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:26:01.903 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:26:01.903 -08 000000033 INF: ===================Camera #0 Frame #261===================
17-02-28 20:26:01.931 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:26:01.931 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:26:01.931 -08 000000035 INF: ===================Camera #2 Frame #262===================
17-02-28 20:26:01.951 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:02.072 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:26:02.072 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:26:02.072 -08 000000033 INF: ===================Camera #0 Frame #268===================
17-02-28 20:26:02.086 -08 000000072 INF: Y Motor: Unshifted Position: 1223361
17-02-28 20:26:02.102 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:26:02.102 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:26:02.102 -08 000000035 INF: ===================Camera #2 Frame #269===================
17-02-28 20:26:02.136 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:02.211 -08 000000023 INF: FPGA: Recv TDIYWAIT
17-02-28 20:26:02.211 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:02.213 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:26:02.214 -08 000000047 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:26:02.214 -08 000000047 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:26:02.214 -08 000000047 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:26:02.214 -08 000000047 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:26:02.214 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:26:02.214 -08 000000047 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:26:02.214 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:26:02.214 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:26:02.214 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:26:02.215 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:26:02.244 -08 000000033 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:02.244 -08 000000033 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:02.244 -08 000000033 INF: ===================Camera #0 Frame #272===================
17-02-28 20:26:02.257 -08 000000033 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:02.258 -08 000000033 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:02.263 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:02.399 -08 000000072 INF: Y Motor: Unshifted Position: 1021646
17-02-28 20:26:02.422 -08 000000033 INF: Camera #0 ReleaseBuffer
17-02-28 20:26:02.422 -08 000000035 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:02.422 -08 000000035 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:02.422 -08 000000035 INF: ===================Camera #2 Frame #272===================
17-02-28 20:26:02.422 -08 000000033 INF: ===================Camera TDI===================
17-02-28 20:26:02.432 -08 000000035 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:02.433 -08 000000035 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:02.449 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:02.453 -08 000000033 INF: ======================================
17-02-28 20:26:02.585 -08 000000072 INF: Y Motor: Unshifted Position: 989992
17-02-28 20:26:02.585 -08 000000072 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:02.585 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:02.585 -08 000000039 INF: FPGA: Recv EX1MV
17-02-28 20:26:02.585 -08 000000039 INF: FPGA: Recv EX2MV
17-02-28 20:26:02.585 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 371.1851 ms
17-02-28 20:26:02.586 -08 000000047 INF: Excitation Filter 1: Moved 107 steps in 371.5291 ms
17-02-28 20:26:02.586 -08 000000047 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.6436 ms
17-02-28 20:26:02.586 -08 000000047 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.7173 ms
17-02-28 20:26:02.586 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.3052 ms
17-02-28 20:26:02.586 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.6877 ms
17-02-28 20:26:02.586 -08 000000047 INF: ======================================
17-02-28 20:26:02.586 -08 000000051 INF: ======================================
17-02-28 20:26:02.587 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:02.589 -08 000000108 INF: ======================================
17-02-28 20:26:02.626 -08 000000035 INF: Camera #2 ReleaseBuffer
17-02-28 20:26:02.626 -08 000000035 INF: ===================Camera TDI===================
17-02-28 20:26:02.648 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:26:02.648 -08 000000072 INF: Y Motor: Moved to 14.8999 after 7863 ms
17-02-28 20:26:02.648 -08 000000072 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:02.659 -08 000000035 INF: ======================================
17-02-28 20:26:02.661 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:26:02.662 -08 000000102 INF: ======================================
17-02-28 20:26:02.710 -08 000000072 INF: Y Motor: Recv v 4097\r
17-02-28 20:26:02.710 -08 000000072 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:02.710 -08 000000072 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:02.772 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:26:02.772 -08 000000072 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:02.772 -08 000000072 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:02.837 -08 000000072 INF: Y Motor: Recv v 134217728\r
17-02-28 20:26:02.837 -08 000000072 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:26:02.837 -08 000000072 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:02.837 -08 000000072 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:02.899 -08 000000072 INF: Y Motor: Recv v 0\r
17-02-28 20:26:02.899 -08 000000072 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:02.899 -08 000000072 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:02.899 -08 000000072 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:02.961 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:26:02.961 -08 000000072 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:02.961 -08 000000072 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:03.023 -08 000000072 INF: Y Motor: Recv ok\r
17-02-28 20:26:03.023 -08 000000072 INF: ======================================
17-02-28 20:26:03.024 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:03.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:03.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.026 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:26:03.083 -08 000000039 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:26:03.083 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:03.145 -08 000000095 INF: FPGA: Recv TDIYERD 1489994
17-02-28 20:26:03.145 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:26:03.207 -08 000000090 INF: FPGA: Recv ZADCR 34215
17-02-28 20:26:03.207 -08 000000042 INF: At scan end Y pos = 14.900 and Z pos = -0.131. Y moved -48.539 mm
17-02-28 20:26:03.207 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:26:03.269 -08 000000051 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:26:03.269 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:26:03.269 -08 000000042 INF: TDIScan finished after 11954.8549 ms
17-02-28 20:26:03.269 -08 000000042 INF: Image[0]: Y should trigger at 63.439 mm, 2nd row was at 64.348 mm (error = 0.909 mm)
17-02-28 20:26:03.269 -08 000000042 INF: Image[2]: Y should trigger at 63.439 mm, 2nd row was at 64.348 mm (error = 0.909 mm)
17-02-28 20:26:03.271 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.306 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.586 um
17-02-28 20:26:03.306 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.307 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:26:03.336 -08 000000085 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:26:03.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.338 -08 000000033 INF: ===================Dither Clean Up Command===================
17-02-28 20:26:03.338 -08 000000059 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:26:03.338 -08 000000074 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:26:03.338 -08 000000102 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:26:03.338 -08 000000074 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:03.338 -08 000000074 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:03.338 -08 000000102 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:26:03.338 -08 000000102 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:26:03.339 -08 000000059 INF: ======================================
17-02-28 20:26:03.339 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:03.339 -08 000000108 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:03.340 -08 000000072 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:26:03.343 -08 000000108 INF: ===================LFT:Extracting coords===================
17-02-28 20:26:03.370 -08 000000108 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:03.371 -08 000000108 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:26:03.372 -08 000000099 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.372 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.372 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.372 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.372 -08 000000099 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:03.372 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:03.373 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:03.373 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:03.396 -08 000000034 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:03.396 -08 000000034 INF: FPGA: Recv ZSEL 
17-02-28 20:26:03.396 -08 000000072 INF: FPGA: Xmit ZDACW 40731\n
17-02-28 20:26:03.396 -08 000000102 INF: ======================================
17-02-28 20:26:03.398 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:26:03.398 -08 000000074 INF: ======================================
17-02-28 20:26:03.446 -08 000000099 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:03.447 -08 000000051 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:03.447 -08 000000087 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:03.450 -08 000000047 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:03.458 -08 000000078 INF: FPGA: Recv ZDACW 
17-02-28 20:26:03.459 -08 000000072 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:26:03.459 -08 000000072 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:26:03.520 -08 000000083 INF: FPGA: Recv TDIBB
17-02-28 20:26:03.520 -08 000000072 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:03.521 -08 000000072 INF: ======================================
17-02-28 20:26:03.598 -08 000000099 INF: LFT found best fwhm score 2.000103 in 152 ms
17-02-28 20:26:03.598 -08 000000099 INF: LFT found good score at index 5165 with fwhm value 2.000103. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:8,T
17-02-28 20:26:03.598 -08 000000087 INF: LFT found best fwhm score 2.155303 in 151 ms
17-02-28 20:26:03.598 -08 000000087 INF: LFT found good score at index 7189 with fwhm value 2.155303. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:8,T
17-02-28 20:26:03.598 -08 000000051 INF: LFT found best fwhm score 2.000293 in 151 ms
17-02-28 20:26:03.598 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.598 -08 000000051 INF: LFT found good score at index 1249 with fwhm value 2.000293. Next cycle, cycle 4 starting Z position for top surface is at -0.156 mm FC:B, C:3,L:8,T
17-02-28 20:26:03.599 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.599 -08 000000087 INF: ======================================
17-02-28 20:26:03.599 -08 000000099 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.599 -08 000000051 INF: ======================================
17-02-28 20:26:03.599 -08 000000099 INF: ======================================
17-02-28 20:26:03.605 -08 000000047 INF: LFT found best fwhm score 2.000903 in 155 ms
17-02-28 20:26:03.605 -08 000000047 INF: LFT found good score at index 3853 with fwhm value 2.000903. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:8,T
17-02-28 20:26:03.606 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:26:03.606 -08 000000047 INF: ======================================
17-02-28 20:26:03.607 -08 000000108 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:03.609 -08 000000108 INF: LFT weighted average best Z for top surface is at -0.155mm FC:B, C:3,L:8,T
17-02-28 20:26:03.609 -08 000000108 INF: ======================================
17-02-28 20:26:03.610 -08 000000033 INF: ======================================
17-02-28 20:26:03.611 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:26:03.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:26:03.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:26:03.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:26:03.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:26:03.613 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:26:03.614 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:26:03.614 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:26:03.614 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:26:03.614 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 1 - X = 87.98663 Y = 39.76308===================
17-02-28 20:26:03.637 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:26:03.637 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:26:03.638 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:26:03.638 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:03.638 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:26:03.638 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:26:03.638 -08 000000042 INF: Transformed XStagePosition from 89.09464 mm to 89.1049850098789 mm.
17-02-28 20:26:03.650 -08 000000042 INF: Transformed StartingYStagePosition from 64.5530893554688 mm to 64.5510193555392 mm.
17-02-28 20:26:03.650 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3530893554688 mm to 64.3510193555392 mm.
17-02-28 20:26:03.650 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4438393554687 mm to 63.4417693555392 mm.
17-02-28 20:26:03.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Populating image tags===================
17-02-28 20:26:03.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:03.653 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -155.4 um, section = H_1
17-02-28 20:26:03.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:03.679 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:03.682 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1102 Request: {"Cycle":3,"Lane":8,"Tile":1102,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF279","HCSMMF223","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.684 -08 000000023 INF: ===================MoveEmissionFilters===================
17-02-28 20:26:03.686 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:26:03.687 -08 000000030 INF: ===================Move X,Y, Parallel===================
17-02-28 20:26:03.690 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:03.693 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:03.694 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:03.694 -08 000000078 INF: ===================Move X Motor without settling===================
17-02-28 20:26:03.694 -08 000000078 INF: X Motor: Xmit PR VM\n
17-02-28 20:26:03.695 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:26:03.695 -08 000000050 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:26:03.695 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:03.696 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:26:03.697 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:03.698 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:03.703 -08 000000077 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:26:03.704 -08 000000077 INF: ======================================
17-02-28 20:26:03.704 -08 000000095 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:03.704 -08 000000095 INF: Y Motor: Moving to 64.5510 mm @25.000 mm/sec, started at 14.8999 mm
17-02-28 20:26:03.704 -08 000000095 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:03.704 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:03.705 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:03.706 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:03.708 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:26:03.709 -08 000000074 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:26:03.709 -08 000000074 INF: ======================================
17-02-28 20:26:03.709 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:03.710 -08 000000064 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:26:03.710 -08 000000064 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:26:03.710 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:03.710 -08 000000045 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:26:03.711 -08 000000064 INF: ======================================
17-02-28 20:26:03.711 -08 000000045 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:03.711 -08 000000045 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:26:03.711 -08 000000074 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:26:03.711 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:03.712 -08 000000074 INF: ======================================
17-02-28 20:26:03.712 -08 000000102 INF: ===================Camera Arm TDI===================
17-02-28 20:26:03.713 -08 000000082 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:26:03.713 -08 000000102 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:03.713 -08 000000074 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:26:03.714 -08 000000064 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:26:03.714 -08 000000082 INF: ======================================
17-02-28 20:26:03.714 -08 000000037 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:26:03.714 -08 000000074 INF: ======================================
17-02-28 20:26:03.714 -08 000000102 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:03.714 -08 000000064 INF: ======================================
17-02-28 20:26:03.715 -08 000000037 INF: ======================================
17-02-28 20:26:03.715 -08 000000077 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:03.715 -08 000000047 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:03.716 -08 000000059 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:03.717 -08 000000047 INF: ======================================
17-02-28 20:26:03.717 -08 000000077 INF: ======================================
17-02-28 20:26:03.717 -08 000000059 INF: ======================================
17-02-28 20:26:03.718 -08 000000089 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:03.720 -08 000000089 INF: ======================================
17-02-28 20:26:03.721 -08 000000023 INF: ======================================
17-02-28 20:26:03.756 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1101 Request: {"Cycle":3,"Lane":8,"Tile":1101,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF200","HCSMMF264","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.768 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1103 Request: {"Cycle":3,"Lane":8,"Tile":1103,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF183","HCSMMF261","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.776 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:26:03.777 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:03.777 -08 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:26:03.777 -08 000000078 INF: X Motor: Xmit PR VI\n
17-02-28 20:26:03.777 -08 000000095 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:03.777 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:03.778 -08 000000045 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:03.778 -08 000000045 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:26:03.781 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1106 Request: {"Cycle":3,"Lane":8,"Tile":1106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF194","HCSMMF251","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.795 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1104 Request: {"Cycle":3,"Lane":8,"Tile":1104,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF255","HCSMMF254","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.796 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1107 Request: {"Cycle":3,"Lane":8,"Tile":1107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF199","HCSMMF283","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.798 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1108 Request: {"Cycle":3,"Lane":8,"Tile":1108,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF282","HCSMMF227","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.800 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1109 Request: {"Cycle":3,"Lane":8,"Tile":1109,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF176","HCSMMF206","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.802 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1111 Request: {"Cycle":3,"Lane":8,"Tile":1111,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF265","HCSMMF201","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.807 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1110 Request: {"Cycle":3,"Lane":8,"Tile":1110,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF286","HCSMMF278","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.809 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1113 Request: {"Cycle":3,"Lane":8,"Tile":1113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF248","HCSMMF212","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.813 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1114 Request: {"Cycle":3,"Lane":8,"Tile":1114,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF177","HCSMMF181","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.815 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1105 Request: {"Cycle":3,"Lane":8,"Tile":1105,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF242","HCSMMF285","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.824 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1112 Request: {"Cycle":3,"Lane":8,"Tile":1112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF258","HCSMMF243","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.831 -08 000000104 INF: FPGA: Recv TDIBB
17-02-28 20:26:03.832 -08 000000045 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:03.832 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1116 Request: {"Cycle":3,"Lane":8,"Tile":1116,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF247","HCSMMF245","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.833 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:03.833 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:03.833 -08 000000078 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:26:03.833 -08 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:26:03.833 -08 000000078 INF: X Motor: Moving to 89.1050 mm @15.000 mm/sec, started at 88.0088 mm
17-02-28 20:26:03.834 -08 000000078 INF: X Motor: Xmit MA 12331\n
17-02-28 20:26:03.834 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1119 Request: {"Cycle":3,"Lane":8,"Tile":1119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF202","HCSMMF196","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.834 -08 000000045 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:26:03.835 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:03.836 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1117 Request: {"Cycle":3,"Lane":8,"Tile":1117,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF203","HCSMMF185","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.837 -08 000000045 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:26:03.838 -08 000000045 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:26:03.838 -08 000000045 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:26:03.840 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1118 Request: {"Cycle":3,"Lane":8,"Tile":1118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF281","HCSMMF187","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.841 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1125 Request: {"Cycle":3,"Lane":8,"Tile":1125,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF204","HCSMMF220","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.843 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1128 Request: {"Cycle":3,"Lane":8,"Tile":1128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF250","HCSMMF253","HCSMMF266","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.844 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1115 Request: {"Cycle":3,"Lane":8,"Tile":1115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF226","HCSMMF191","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.845 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1120 Request: {"Cycle":3,"Lane":8,"Tile":1120,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF190","HCSMMF274","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.846 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1124 Request: {"Cycle":3,"Lane":8,"Tile":1124,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF275","HCSMMF272","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.847 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1121 Request: {"Cycle":3,"Lane":8,"Tile":1121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF276","HCSMMF210","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.848 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1126 Request: {"Cycle":3,"Lane":8,"Tile":1126,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF232","HCSMMF241","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.850 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1123 Request: {"Cycle":3,"Lane":8,"Tile":1123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF230","HCSMMF234","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.851 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1122 Request: {"Cycle":3,"Lane":8,"Tile":1122,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF259","HCSMMF184","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.854 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1127 Request: {"Cycle":3,"Lane":8,"Tile":1127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF178","HCSMMF216","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:03.863 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:03.870 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:26:03.893 -08 000000037 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:03.893 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:03.895 -08 000000078 INF: X Motor: Recv MA 12331\r\n>
17-02-28 20:26:03.895 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:03.895 -08 000000095 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:03.895 -08 000000078 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:26:03.895 -08 000000095 INF: Y Motor: Set target position to 5955102 encoder counts
17-02-28 20:26:03.895 -08 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:26:03.895 -08 000000095 INF: Y Motor: Xmit s r0xca 5955102\r
17-02-28 20:26:03.895 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:03.897 -08 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:26:03.897 -08 000000045 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:26:03.897 -08 000000045 INF: Z Motor: Arming to move to -0.1154 mm
17-02-28 20:26:03.897 -08 000000045 INF: FPGA: Xmit ZYT 6435102 4\n
17-02-28 20:26:03.948 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:03.949 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:26:03.958 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:26:03.958 -08 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1489992 enc / 14.900 mm / ) = 6435102 enc / 64.351 mm
17-02-28 20:26:03.958 -08 000000045 INF: FPGA: Xmit ZARM 30245\n
17-02-28 20:26:03.961 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:03.961 -08 000000095 INF: Y Motor: Start the move command
17-02-28 20:26:03.961 -08 000000095 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:03.985 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:03.991 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:26:04.020 -08 000000037 INF: FPGA: Recv ZARM
17-02-28 20:26:04.020 -08 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9755 ms
17-02-28 20:26:04.020 -08 000000045 INF: Z Motor: ArmAbsStepped took 123.0309 ms
17-02-28 20:26:04.020 -08 000000045 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:04.022 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:04.022 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:26:04.022 -08 000000095 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:26:04.022 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:04.024 -08 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:26:04.024 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:26:04.026 -08 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:26:04.026 -08 000000045 INF: ===================TDI Scan Setup===================
17-02-28 20:26:04.027 -08 000000045 INF: ======================================
17-02-28 20:26:04.086 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:04.091 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:26:04.146 -08 000000095 INF: Y Motor: Unshifted Position: 1070276
17-02-28 20:26:04.196 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:04.294 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:04.300 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:26:04.311 -08 000000102 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:26:04.311 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:26:04.311 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:04.320 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:04.326 -08 000000102 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:04.328 -08 000000102 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:04.387 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:04.459 -08 000000095 INF: Y Motor: Unshifted Position: 1776660
17-02-28 20:26:04.509 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:04.521 -08 000000078 INF: X Motor: Xmit PR ER\n
17-02-28 20:26:04.584 -08 000000078 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:26:04.584 -08 000000078 INF: X Motor: Moved to 89.1050 after 689 ms
17-02-28 20:26:04.584 -08 000000078 INF: ======================================
17-02-28 20:26:04.633 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:04.675 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:26:04.769 -08 000000095 INF: Y Motor: Unshifted Position: 2552509
17-02-28 20:26:04.819 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:04.925 -08 000000102 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:26:04.925 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:26:04.925 -08 000000102 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:04.940 -08 000000102 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:04.942 -08 000000102 INF: ===================Camera Arm TDI===================
17-02-28 20:26:04.943 -08 000000102 INF: ======================================
17-02-28 20:26:04.944 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:04.945 -08 000000050 INF: ======================================
17-02-28 20:26:04.946 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:05.082 -08 000000095 INF: Y Motor: Unshifted Position: 3334955
17-02-28 20:26:05.132 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:05.256 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:05.395 -08 000000095 INF: Y Motor: Unshifted Position: 4118371
17-02-28 20:26:05.445 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:05.569 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:05.707 -08 000000095 INF: Y Motor: Unshifted Position: 4898295
17-02-28 20:26:05.757 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:05.882 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:06.018 -08 000000095 INF: Y Motor: Unshifted Position: 5677885
17-02-28 20:26:06.068 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:06.192 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:06.332 -08 000000095 INF: Y Motor: Unshifted Position: 5955106
17-02-28 20:26:06.382 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:06.518 -08 000000095 INF: Y Motor: Unshifted Position: 5955103
17-02-28 20:26:06.518 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:06.518 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:06.581 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:06.581 -08 000000095 INF: Y Motor: Moved to 64.5510 after 2558 ms
17-02-28 20:26:06.581 -08 000000095 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:06.642 -08 000000095 INF: Y Motor: Recv v 4096\r
17-02-28 20:26:06.642 -08 000000095 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:06.642 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:06.704 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:06.704 -08 000000095 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:06.704 -08 000000095 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:06.769 -08 000000095 INF: Y Motor: Recv v 402653184\r
17-02-28 20:26:06.769 -08 000000095 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:26:06.769 -08 000000095 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:06.769 -08 000000095 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:06.829 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:06.829 -08 000000095 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:06.829 -08 000000095 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:06.829 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:06.891 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:06.891 -08 000000095 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:06.891 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:06.956 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:06.956 -08 000000095 INF: ======================================
17-02-28 20:26:06.957 -08 000000030 INF: ===================Move X,Y===================
17-02-28 20:26:06.958 -08 000000030 INF: ======================================
17-02-28 20:26:06.959 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:06.960 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:06.960 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:26:06.960 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:26:07.018 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:07.018 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:26:07.078 -08 000000034 INF: FPGA: Recv ZFREQCL
17-02-28 20:26:07.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:26:07.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:07.079 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:07.140 -08 000000050 INF: FPGA: Recv TDIYERD 6455104
17-02-28 20:26:07.140 -08 000000042 INF: Before scan, Y encoder from FPGA = 6455104 counts (64.551 mm)
17-02-28 20:26:07.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:07.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:07.145 -08 000000059 INF: ===================TDI FPGA Arm===================
17-02-28 20:26:07.145 -08 000000059 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:07.146 -08 000000059 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:26:07.146 -08 000000059 INF: FPGA: Xmit TDIYPOS 6344177\n
17-02-28 20:26:07.147 -08 000000037 INF: ===================Set YMotor gains for scans===================
17-02-28 20:26:07.147 -08 000000037 INF: ======================================
17-02-28 20:26:07.202 -08 000000047 INF: FPGA: Recv TDIYPOS
17-02-28 20:26:07.202 -08 000000059 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:07.204 -08 000000059 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:26:07.204 -08 000000059 INF: FPGA: Xmit TDIYARM3 139264 6435102 1 1\n
17-02-28 20:26:07.264 -08 000000074 INF: FPGA: Recv TDIYARM3
17-02-28 20:26:07.265 -08 000000059 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:07.267 -08 000000059 INF: ===================TDI FPGA Arm===================
17-02-28 20:26:07.268 -08 000000059 INF: ======================================
17-02-28 20:26:07.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:07.269 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:07.270 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:07.270 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:07.271 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:07.271 -08 000000062 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:26:07.271 -08 000000050 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:26:07.271 -08 000000062 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:26:07.271 -08 000000062 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:26:07.272 -08 000000062 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:26:07.272 -08 000000062 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:26:07.272 -08 000000050 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:26:07.272 -08 000000050 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:26:07.272 -08 000000050 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:26:07.273 -08 000000050 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:26:07.640 -08 000000090 INF: FPGA: Recv EX2MV
17-02-28 20:26:07.640 -08 000000090 INF: FPGA: Recv EX1MV
17-02-28 20:26:07.640 -08 000000062 INF: Excitation Filter 2: Moved -107 steps in 368.4429 ms
17-02-28 20:26:07.640 -08 000000062 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.6133 ms
17-02-28 20:26:07.640 -08 000000050 INF: Excitation Filter 1: Moved -107 steps in 368.3092 ms
17-02-28 20:26:07.640 -08 000000050 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.5551 ms
17-02-28 20:26:07.640 -08 000000050 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.6673 ms
17-02-28 20:26:07.640 -08 000000062 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.6908 ms
17-02-28 20:26:07.641 -08 000000050 INF: ======================================
17-02-28 20:26:07.641 -08 000000062 INF: ======================================
17-02-28 20:26:07.642 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:07.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:07.644 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:26:07.644 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:07.644 -08 000000060 INF: ===================FPGA Z Wait===================
17-02-28 20:26:07.644 -08 000000064 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:07.644 -08 000000060 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:26:07.644 -08 000000064 INF: Y Motor: Moving to 14.9027 mm @6.500 mm/sec, started at 64.5510 mm
17-02-28 20:26:07.644 -08 000000064 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:07.644 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:07.645 -08 000000034 INF: ===================Camera TDI, Parallel===================
17-02-28 20:26:07.645 -08 000000074 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:26:07.645 -08 000000074 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:26:07.645 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:26:07.646 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:26:07.648 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:07.648 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:07.648 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:07.648 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:07.704 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:07.704 -08 000000064 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:07.704 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:07.767 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:07.767 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:07.798 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:07.798 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:07.798 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:07.798 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:07.827 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:26:07.827 -08 000000064 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:07.827 -08 000000064 INF: Y Motor: Set target position to 990268 encoder counts
17-02-28 20:26:07.827 -08 000000064 INF: Y Motor: Xmit s r0xca 990268\r
17-02-28 20:26:07.892 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:07.892 -08 000000064 INF: Y Motor: Start the move command
17-02-28 20:26:07.892 -08 000000064 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:07.948 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:07.948 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:07.948 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:07.948 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:07.954 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:07.954 -08 000000064 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:26:07.954 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.014 -08 000000087 INF: FPGA: Recv ZWAIT 
17-02-28 20:26:08.014 -08 000000060 INF: ======================================
17-02-28 20:26:08.078 -08 000000064 INF: Y Motor: Unshifted Position: 5893463
17-02-28 20:26:08.098 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:08.098 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:08.098 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:08.098 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:08.098 -08 000000104 INF: ===================Camera #0 Frame #5===================
17-02-28 20:26:08.098 -08 000000054 INF: ===================Camera #2 Frame #5===================
17-02-28 20:26:08.128 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.253 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.271 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:26:08.271 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:26:08.271 -08 000000104 INF: ===================Camera #0 Frame #11===================
17-02-28 20:26:08.272 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:26:08.272 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:26:08.272 -08 000000054 INF: ===================Camera #2 Frame #11===================
17-02-28 20:26:08.391 -08 000000064 INF: Y Motor: Unshifted Position: 5689798
17-02-28 20:26:08.441 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.442 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:26:08.442 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:26:08.442 -08 000000054 INF: ===================Camera #2 Frame #17===================
17-02-28 20:26:08.447 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:26:08.447 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:26:08.447 -08 000000104 INF: ===================Camera #0 Frame #17===================
17-02-28 20:26:08.565 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.620 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:26:08.620 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:26:08.620 -08 000000054 INF: ===================Camera #2 Frame #24===================
17-02-28 20:26:08.623 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:26:08.623 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:26:08.623 -08 000000104 INF: ===================Camera #0 Frame #24===================
17-02-28 20:26:08.701 -08 000000064 INF: Y Motor: Unshifted Position: 5488311
17-02-28 20:26:08.751 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.803 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:26:08.803 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:26:08.803 -08 000000054 INF: ===================Camera #2 Frame #31===================
17-02-28 20:26:08.804 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:26:08.804 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:26:08.804 -08 000000104 INF: ===================Camera #0 Frame #31===================
17-02-28 20:26:08.878 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:08.976 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:26:08.976 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:26:08.976 -08 000000104 INF: ===================Camera #0 Frame #37===================
17-02-28 20:26:08.984 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:26:08.984 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:26:08.984 -08 000000054 INF: ===================Camera #2 Frame #37===================
17-02-28 20:26:09.014 -08 000000064 INF: Y Motor: Unshifted Position: 5284636
17-02-28 20:26:09.064 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:09.145 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:26:09.145 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:26:09.145 -08 000000104 INF: ===================Camera #0 Frame #43===================
17-02-28 20:26:09.154 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:26:09.154 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:26:09.154 -08 000000054 INF: ===================Camera #2 Frame #43===================
17-02-28 20:26:09.188 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:09.313 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:26:09.313 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:26:09.313 -08 000000104 INF: ===================Camera #0 Frame #49===================
17-02-28 20:26:09.327 -08 000000064 INF: Y Motor: Unshifted Position: 5081180
17-02-28 20:26:09.333 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:26:09.333 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:26:09.333 -08 000000054 INF: ===================Camera #2 Frame #50===================
17-02-28 20:26:09.377 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:09.488 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:26:09.488 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:26:09.488 -08 000000104 INF: ===================Camera #0 Frame #56===================
17-02-28 20:26:09.501 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:09.517 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:26:09.517 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:26:09.517 -08 000000054 INF: ===================Camera #2 Frame #57===================
17-02-28 20:26:09.637 -08 000000064 INF: Y Motor: Unshifted Position: 4879466
17-02-28 20:26:09.670 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:26:09.670 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:26:09.670 -08 000000104 INF: ===================Camera #0 Frame #62===================
17-02-28 20:26:09.687 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:09.696 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:26:09.696 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:26:09.696 -08 000000054 INF: ===================Camera #2 Frame #63===================
17-02-28 20:26:09.814 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:09.847 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:26:09.847 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:26:09.847 -08 000000104 INF: ===================Camera #0 Frame #69===================
17-02-28 20:26:09.874 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:26:09.874 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:26:09.874 -08 000000054 INF: ===================Camera #2 Frame #70===================
17-02-28 20:26:09.951 -08 000000064 INF: Y Motor: Unshifted Position: 4675365
17-02-28 20:26:10.001 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:10.028 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:26:10.028 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:26:10.028 -08 000000104 INF: ===================Camera #0 Frame #76===================
17-02-28 20:26:10.057 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:26:10.057 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:26:10.057 -08 000000054 INF: ===================Camera #2 Frame #77===================
17-02-28 20:26:10.125 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:10.200 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:26:10.200 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:26:10.200 -08 000000104 INF: ===================Camera #0 Frame #82===================
17-02-28 20:26:10.235 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:26:10.235 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:26:10.235 -08 000000054 INF: ===================Camera #2 Frame #83===================
17-02-28 20:26:10.261 -08 000000064 INF: Y Motor: Unshifted Position: 4473637
17-02-28 20:26:10.311 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:10.371 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:26:10.371 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:26:10.371 -08 000000104 INF: ===================Camera #0 Frame #88===================
17-02-28 20:26:10.414 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:26:10.414 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:26:10.414 -08 000000054 INF: ===================Camera #2 Frame #90===================
17-02-28 20:26:10.438 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:10.540 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:26:10.540 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:26:10.540 -08 000000104 INF: ===================Camera #0 Frame #94===================
17-02-28 20:26:10.574 -08 000000064 INF: Y Motor: Unshifted Position: 4270193
17-02-28 20:26:10.586 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:26:10.586 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:26:10.586 -08 000000054 INF: ===================Camera #2 Frame #96===================
17-02-28 20:26:10.624 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:10.709 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:26:10.709 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:26:10.709 -08 000000104 INF: ===================Camera #0 Frame #101===================
17-02-28 20:26:10.748 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:10.755 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:26:10.755 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:26:10.755 -08 000000054 INF: ===================Camera #2 Frame #102===================
17-02-28 20:26:10.880 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:26:10.880 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:26:10.880 -08 000000104 INF: ===================Camera #0 Frame #107===================
17-02-28 20:26:10.887 -08 000000064 INF: Y Motor: Unshifted Position: 4068465
17-02-28 20:26:10.925 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:26:10.925 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:26:10.925 -08 000000054 INF: ===================Camera #2 Frame #109===================
17-02-28 20:26:10.937 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.049 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:26:11.049 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:26:11.049 -08 000000104 INF: ===================Camera #0 Frame #113===================
17-02-28 20:26:11.061 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.098 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:26:11.098 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:26:11.098 -08 000000054 INF: ===================Camera #2 Frame #115===================
17-02-28 20:26:11.197 -08 000000064 INF: Y Motor: Unshifted Position: 3864803
17-02-28 20:26:11.217 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:26:11.217 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:26:11.217 -08 000000104 INF: ===================Camera #0 Frame #119===================
17-02-28 20:26:11.247 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.267 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:26:11.267 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:26:11.267 -08 000000054 INF: ===================Camera #2 Frame #121===================
17-02-28 20:26:11.374 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.386 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:26:11.386 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:26:11.386 -08 000000104 INF: ===================Camera #0 Frame #126===================
17-02-28 20:26:11.436 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:26:11.436 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:26:11.436 -08 000000054 INF: ===================Camera #2 Frame #127===================
17-02-28 20:26:11.510 -08 000000064 INF: Y Motor: Unshifted Position: 3661350
17-02-28 20:26:11.557 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:26:11.557 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:26:11.557 -08 000000104 INF: ===================Camera #0 Frame #132===================
17-02-28 20:26:11.560 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.607 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:26:11.607 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:26:11.607 -08 000000054 INF: ===================Camera #2 Frame #134===================
17-02-28 20:26:11.684 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.725 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:26:11.725 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:26:11.725 -08 000000104 INF: ===================Camera #0 Frame #138===================
17-02-28 20:26:11.779 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:26:11.779 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:26:11.779 -08 000000054 INF: ===================Camera #2 Frame #140===================
17-02-28 20:26:11.823 -08 000000064 INF: Y Motor: Unshifted Position: 3459860
17-02-28 20:26:11.873 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:11.893 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:26:11.893 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:26:11.893 -08 000000104 INF: ===================Camera #0 Frame #144===================
17-02-28 20:26:11.948 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:26:11.948 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:26:11.948 -08 000000054 INF: ===================Camera #2 Frame #146===================
17-02-28 20:26:11.998 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.061 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:26:12.061 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:26:12.061 -08 000000104 INF: ===================Camera #0 Frame #150===================
17-02-28 20:26:12.117 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:26:12.117 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:26:12.117 -08 000000054 INF: ===================Camera #2 Frame #153===================
17-02-28 20:26:12.134 -08 000000064 INF: Y Motor: Unshifted Position: 3255532
17-02-28 20:26:12.184 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.229 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:26:12.229 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:26:12.229 -08 000000104 INF: ===================Camera #0 Frame #157===================
17-02-28 20:26:12.289 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:26:12.289 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:26:12.289 -08 000000054 INF: ===================Camera #2 Frame #159===================
17-02-28 20:26:12.308 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.400 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:26:12.400 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:26:12.400 -08 000000104 INF: ===================Camera #0 Frame #163===================
17-02-28 20:26:12.447 -08 000000064 INF: Y Motor: Unshifted Position: 3054048
17-02-28 20:26:12.458 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:26:12.458 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:26:12.458 -08 000000054 INF: ===================Camera #2 Frame #165===================
17-02-28 20:26:12.497 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.568 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:26:12.568 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:26:12.568 -08 000000104 INF: ===================Camera #0 Frame #169===================
17-02-28 20:26:12.621 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.627 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:26:12.627 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:26:12.627 -08 000000054 INF: ===================Camera #2 Frame #171===================
17-02-28 20:26:12.736 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:26:12.736 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:26:12.736 -08 000000104 INF: ===================Camera #0 Frame #175===================
17-02-28 20:26:12.757 -08 000000064 INF: Y Motor: Unshifted Position: 2850383
17-02-28 20:26:12.796 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:26:12.796 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:26:12.796 -08 000000054 INF: ===================Camera #2 Frame #178===================
17-02-28 20:26:12.807 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.904 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:26:12.904 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:26:12.904 -08 000000104 INF: ===================Camera #0 Frame #182===================
17-02-28 20:26:12.934 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:12.968 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:26:12.968 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:26:12.968 -08 000000054 INF: ===================Camera #2 Frame #184===================
17-02-28 20:26:13.070 -08 000000064 INF: Y Motor: Unshifted Position: 2646931
17-02-28 20:26:13.075 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:26:13.075 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:26:13.075 -08 000000104 INF: ===================Camera #0 Frame #188===================
17-02-28 20:26:13.120 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:13.137 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:26:13.137 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:26:13.137 -08 000000054 INF: ===================Camera #2 Frame #190===================
17-02-28 20:26:13.243 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:26:13.243 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:26:13.243 -08 000000104 INF: ===================Camera #0 Frame #194===================
17-02-28 20:26:13.245 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:13.306 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:26:13.306 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:26:13.306 -08 000000054 INF: ===================Camera #2 Frame #196===================
17-02-28 20:26:13.383 -08 000000064 INF: Y Motor: Unshifted Position: 2445216
17-02-28 20:26:13.411 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:26:13.411 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:26:13.411 -08 000000104 INF: ===================Camera #0 Frame #200===================
17-02-28 20:26:13.433 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:13.475 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 202, frameCount = 203.
17-02-28 20:26:13.475 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 203
17-02-28 20:26:13.475 -08 000000054 INF: ===================Camera #2 Frame #203===================
17-02-28 20:26:13.559 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:13.579 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:26:13.579 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:26:13.579 -08 000000104 INF: ===================Camera #0 Frame #206===================
17-02-28 20:26:13.647 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:26:13.647 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:26:13.647 -08 000000054 INF: ===================Camera #2 Frame #209===================
17-02-28 20:26:13.693 -08 000000064 INF: Y Motor: Unshifted Position: 2241768
17-02-28 20:26:13.743 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:13.747 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:26:13.747 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:26:13.747 -08 000000104 INF: ===================Camera #0 Frame #213===================
17-02-28 20:26:13.816 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:26:13.816 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:26:13.816 -08 000000054 INF: ===================Camera #2 Frame #215===================
17-02-28 20:26:13.870 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:13.918 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:26:13.918 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:26:13.918 -08 000000104 INF: ===================Camera #0 Frame #219===================
17-02-28 20:26:13.985 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:26:13.985 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:26:13.985 -08 000000054 INF: ===================Camera #2 Frame #221===================
17-02-28 20:26:14.007 -08 000000064 INF: Y Motor: Unshifted Position: 2039402
17-02-28 20:26:14.057 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:14.086 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:26:14.086 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:26:14.086 -08 000000104 INF: ===================Camera #0 Frame #225===================
17-02-28 20:26:14.154 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 227, frameCount = 228.
17-02-28 20:26:14.154 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 228
17-02-28 20:26:14.154 -08 000000054 INF: ===================Camera #2 Frame #228===================
17-02-28 20:26:14.181 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:14.254 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:26:14.254 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:26:14.254 -08 000000104 INF: ===================Camera #0 Frame #231===================
17-02-28 20:26:14.317 -08 000000064 INF: Y Motor: Unshifted Position: 1835950
17-02-28 20:26:14.326 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:26:14.326 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:26:14.326 -08 000000054 INF: ===================Camera #2 Frame #234===================
17-02-28 20:26:14.367 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:14.422 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:26:14.422 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:26:14.422 -08 000000104 INF: ===================Camera #0 Frame #237===================
17-02-28 20:26:14.491 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:14.495 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:26:14.495 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:26:14.495 -08 000000054 INF: ===================Camera #2 Frame #240===================
17-02-28 20:26:14.590 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:26:14.590 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:26:14.590 -08 000000104 INF: ===================Camera #0 Frame #244===================
17-02-28 20:26:14.631 -08 000000064 INF: Y Motor: Unshifted Position: 1633578
17-02-28 20:26:14.664 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:26:14.664 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:26:14.664 -08 000000054 INF: ===================Camera #2 Frame #246===================
17-02-28 20:26:14.681 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:14.761 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:26:14.761 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:26:14.761 -08 000000104 INF: ===================Camera #0 Frame #250===================
17-02-28 20:26:14.805 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:14.835 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 252, frameCount = 253.
17-02-28 20:26:14.835 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 253
17-02-28 20:26:14.835 -08 000000054 INF: ===================Camera #2 Frame #253===================
17-02-28 20:26:14.931 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:26:14.931 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:26:14.931 -08 000000104 INF: ===================Camera #0 Frame #256===================
17-02-28 20:26:14.941 -08 000000064 INF: Y Motor: Unshifted Position: 1429911
17-02-28 20:26:14.991 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:15.009 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:26:15.009 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:26:15.009 -08 000000054 INF: ===================Camera #2 Frame #259===================
17-02-28 20:26:15.099 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:26:15.099 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:26:15.099 -08 000000104 INF: ===================Camera #0 Frame #262===================
17-02-28 20:26:15.115 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:15.179 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:26:15.179 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:26:15.179 -08 000000054 INF: ===================Camera #2 Frame #265===================
17-02-28 20:26:15.255 -08 000000064 INF: Y Motor: Unshifted Position: 1226021
17-02-28 20:26:15.269 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:26:15.269 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:26:15.269 -08 000000104 INF: ===================Camera #0 Frame #269===================
17-02-28 20:26:15.305 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:15.350 -08 000000054 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:15.350 -08 000000054 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:15.350 -08 000000054 INF: ===================Camera #2 Frame #272===================
17-02-28 20:26:15.374 -08 000000054 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:15.375 -08 000000054 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:15.378 -08 000000050 INF: FPGA: Recv TDIYWAIT
17-02-28 20:26:15.378 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:15.379 -08 000000074 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:26:15.380 -08 000000085 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:26:15.380 -08 000000033 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:26:15.381 -08 000000085 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:26:15.381 -08 000000085 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:26:15.381 -08 000000085 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:26:15.381 -08 000000033 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:26:15.381 -08 000000085 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:26:15.381 -08 000000033 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:26:15.381 -08 000000033 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:26:15.382 -08 000000033 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:26:15.429 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:15.541 -08 000000054 INF: Camera #2 ReleaseBuffer
17-02-28 20:26:15.541 -08 000000104 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:15.541 -08 000000104 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:15.541 -08 000000104 INF: ===================Camera #0 Frame #272===================
17-02-28 20:26:15.541 -08 000000054 INF: ===================Camera TDI===================
17-02-28 20:26:15.551 -08 000000104 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:15.552 -08 000000104 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:15.565 -08 000000064 INF: Y Motor: Unshifted Position: 1024309
17-02-28 20:26:15.572 -08 000000054 INF: ======================================
17-02-28 20:26:15.615 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:15.686 -08 000000104 INF: Camera #0 ReleaseBuffer
17-02-28 20:26:15.686 -08 000000104 INF: ===================Camera TDI===================
17-02-28 20:26:15.717 -08 000000104 INF: ======================================
17-02-28 20:26:15.718 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:26:15.719 -08 000000034 INF: ======================================
17-02-28 20:26:15.753 -08 000000099 INF: FPGA: Recv EX2MV
17-02-28 20:26:15.753 -08 000000099 INF: FPGA: Recv EX1MV
17-02-28 20:26:15.753 -08 000000033 INF: Excitation Filter 1: Moved 107 steps in 372.0971 ms
17-02-28 20:26:15.753 -08 000000085 INF: Excitation Filter 2: Moved 107 steps in 372.2594 ms
17-02-28 20:26:15.753 -08 000000033 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.2313 ms
17-02-28 20:26:15.753 -08 000000033 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.3511 ms
17-02-28 20:26:15.753 -08 000000085 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.3682 ms
17-02-28 20:26:15.753 -08 000000085 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.5464 ms
17-02-28 20:26:15.753 -08 000000033 INF: ======================================
17-02-28 20:26:15.753 -08 000000085 INF: ======================================
17-02-28 20:26:15.755 -08 000000064 INF: Y Motor: Unshifted Position: 990267
17-02-28 20:26:15.755 -08 000000064 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:15.755 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:15.755 -08 000000074 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:15.756 -08 000000074 INF: ======================================
17-02-28 20:26:15.814 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:26:15.814 -08 000000064 INF: Y Motor: Moved to 14.9027 after 7860 ms
17-02-28 20:26:15.814 -08 000000064 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:15.880 -08 000000064 INF: Y Motor: Recv v 4097\r
17-02-28 20:26:15.880 -08 000000064 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:15.880 -08 000000064 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:15.939 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:26:15.939 -08 000000064 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:15.939 -08 000000064 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:16.001 -08 000000064 INF: Y Motor: Recv v 134217728\r
17-02-28 20:26:16.001 -08 000000064 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:26:16.001 -08 000000064 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:16.001 -08 000000064 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:16.069 -08 000000064 INF: Y Motor: Recv v 0\r
17-02-28 20:26:16.069 -08 000000064 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:16.069 -08 000000064 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:16.069 -08 000000064 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:16.126 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:16.126 -08 000000064 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:16.126 -08 000000064 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:16.191 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:16.191 -08 000000064 INF: ======================================
17-02-28 20:26:16.192 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:16.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, Scanning===================
17-02-28 20:26:16.194 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.194 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:26:16.251 -08 000000023 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:26:16.251 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:16.314 -08 000000054 INF: FPGA: Recv TDIYERD 1490268
17-02-28 20:26:16.314 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:26:16.376 -08 000000059 INF: FPGA: Recv ZADCR 34345
17-02-28 20:26:16.376 -08 000000042 INF: At scan end Y pos = 14.903 and Z pos = -0.131. Y moved -48.539 mm
17-02-28 20:26:16.376 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:26:16.438 -08 000000085 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:26:16.438 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:26:16.438 -08 000000042 INF: TDIScan finished after 12798.1755 ms
17-02-28 20:26:16.438 -08 000000042 INF: Image[0]: Y should trigger at 63.442 mm, 2nd row was at 64.351 mm (error = 0.909 mm)
17-02-28 20:26:16.438 -08 000000042 INF: Image[2]: Y should trigger at 63.442 mm, 2nd row was at 64.351 mm (error = 0.909 mm)
17-02-28 20:26:16.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.472 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.586 um
17-02-28 20:26:16.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.473 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:26:16.500 -08 000000050 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:26:16.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.501 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:26:16.501 -08 000000034 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:26:16.501 -08 000000077 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:26:16.501 -08 000000030 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:26:16.502 -08 000000030 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:26:16.502 -08 000000034 INF: ======================================
17-02-28 20:26:16.502 -08 000000030 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:26:16.502 -08 000000077 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:16.502 -08 000000077 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:16.502 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:16.502 -08 000000066 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:16.503 -08 000000085 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:26:16.505 -08 000000066 INF: ===================LFT:Extracting coords===================
17-02-28 20:26:16.531 -08 000000066 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:16.531 -08 000000066 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:26:16.532 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.532 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.532 -08 000000054 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.532 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.533 -08 000000089 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:16.533 -08 000000054 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:16.533 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:16.533 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:16.563 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:16.563 -08 000000036 INF: FPGA: Recv ZSEL 
17-02-28 20:26:16.563 -08 000000085 INF: FPGA: Xmit ZDACW 40731\n
17-02-28 20:26:16.563 -08 000000030 INF: ======================================
17-02-28 20:26:16.564 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:26:16.564 -08 000000077 INF: ======================================
17-02-28 20:26:16.609 -08 000000089 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:16.609 -08 000000083 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:16.609 -08 000000054 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:16.609 -08 000000090 INF: FC:B, C:3,L:8, S:T - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:16.624 -08 000000069 INF: FPGA: Recv ZDACW 
17-02-28 20:26:16.625 -08 000000085 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:26:16.625 -08 000000085 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:26:16.690 -08 000000091 INF: FPGA: Recv TDIBB
17-02-28 20:26:16.690 -08 000000085 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:16.691 -08 000000085 INF: ======================================
17-02-28 20:26:16.761 -08 000000089 INF: LFT found best fwhm score 2.000001 in 152 ms
17-02-28 20:26:16.761 -08 000000089 INF: LFT found good score at index 45 with fwhm value 2.000001. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:8,T
17-02-28 20:26:16.761 -08 000000083 INF: LFT found best fwhm score 2.059462 in 152 ms
17-02-28 20:26:16.761 -08 000000083 INF: LFT found good score at index 4273 with fwhm value 2.059462. Next cycle, cycle 4 starting Z position for top surface is at -0.154 mm FC:B, C:3,L:8,T
17-02-28 20:26:16.761 -08 000000090 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:26:16.761 -08 000000090 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.155293398529939 in the next cycle, cycle 4 FC:B, C:3,L:8,T
17-02-28 20:26:16.761 -08 000000054 INF: LFT found best fwhm score 2.00017 in 152 ms
17-02-28 20:26:16.761 -08 000000054 INF: LFT found good score at index 73 with fwhm value 2.00017. Next cycle, cycle 4 starting Z position for top surface is at -0.155 mm FC:B, C:3,L:8,T
17-02-28 20:26:16.761 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.762 -08 000000089 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.762 -08 000000054 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.762 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:26:16.762 -08 000000090 INF: ======================================
17-02-28 20:26:16.762 -08 000000089 INF: ======================================
17-02-28 20:26:16.762 -08 000000083 INF: ======================================
17-02-28 20:26:16.762 -08 000000054 INF: ======================================
17-02-28 20:26:16.763 -08 000000066 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:16.764 -08 000000066 INF: LFT weighted average best Z for top surface is at -0.155mm FC:B, C:3,L:8,T
17-02-28 20:26:16.765 -08 000000066 INF: ======================================
17-02-28 20:26:16.792 -08 000000058 INF: ======================================
17-02-28 20:26:16.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:26:16.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.794 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:26:16.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:26:16.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:26:16.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Channels A, G, T, C===================
17-02-28 20:26:16.795 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:26:16.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:26:16.796 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:26:16.796 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:26:16.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308, Waiting for image analysis===================
17-02-28 20:26:16.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8, Swath 2 - X = 89.09464 Y = 39.76308===================
17-02-28 20:26:16.819 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:26:16.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:26:16.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:26:16.820 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:16.820 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:26:16.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface, Lane 8===================
17-02-28 20:26:16.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Top Surface===================
17-02-28 20:26:16.821 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:26:16.869 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1204 Request: {"Cycle":3,"Lane":8,"Tile":1204,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF270","HCSMMF178","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:16.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:26:16.937 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:26:16.937 -08 000000042 INF: Compensator: Moving OutOfPath
17-02-28 20:26:16.937 -08 000000042 INF: FPGA: Xmit MIOCOMPR\n
17-02-28 20:26:16.965 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1202 Request: {"Cycle":3,"Lane":8,"Tile":1202,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF233","HCSMMF284","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:16.968 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1203 Request: {"Cycle":3,"Lane":8,"Tile":1203,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF257","HCSMMF216","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:16.969 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1206 Request: {"Cycle":3,"Lane":8,"Tile":1206,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF195","HCSMMF260","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:16.986 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1201 Request: {"Cycle":3,"Lane":8,"Tile":1201,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF277","HCSMMF230","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:16.989 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1208 Request: {"Cycle":3,"Lane":8,"Tile":1208,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF177","HCSMMF194","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:16.999 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1207 Request: {"Cycle":3,"Lane":8,"Tile":1207,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF250","HCSMMF273","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.001 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1214 Request: {"Cycle":3,"Lane":8,"Tile":1214,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF252","HCSMMF201","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.011 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1212 Request: {"Cycle":3,"Lane":8,"Tile":1212,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF207","HCSMMF238","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.014 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1211 Request: {"Cycle":3,"Lane":8,"Tile":1211,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF285","HCSMMF271","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.015 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1210 Request: {"Cycle":3,"Lane":8,"Tile":1210,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF251","HCSMMF281","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.017 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1205 Request: {"Cycle":3,"Lane":8,"Tile":1205,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF205","HCSMMF217","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.018 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1217 Request: {"Cycle":3,"Lane":8,"Tile":1217,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF239","HCSMMF206","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.019 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1209 Request: {"Cycle":3,"Lane":8,"Tile":1209,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF227","HCSMMF236","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.020 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1216 Request: {"Cycle":3,"Lane":8,"Tile":1216,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF212","HCSMMF244","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.020 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1215 Request: {"Cycle":3,"Lane":8,"Tile":1215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF248","HCSMMF240","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.022 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1220 Request: {"Cycle":3,"Lane":8,"Tile":1220,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF202","HCSMMF263","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.022 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1213 Request: {"Cycle":3,"Lane":8,"Tile":1213,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF282","HCSMMF242","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.023 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1223 Request: {"Cycle":3,"Lane":8,"Tile":1223,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF190","HCSMMF278","HCSMMF274","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.024 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1227 Request: {"Cycle":3,"Lane":8,"Tile":1227,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF183","HCSMMF261","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.025 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1222 Request: {"Cycle":3,"Lane":8,"Tile":1222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF286","HCSMMF243","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.026 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1226 Request: {"Cycle":3,"Lane":8,"Tile":1226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF264","HCSMMF215","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.027 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1225 Request: {"Cycle":3,"Lane":8,"Tile":1225,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF203","HCSMMF185","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.028 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1221 Request: {"Cycle":3,"Lane":8,"Tile":1221,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF180","HCSMMF198","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.029 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1219 Request: {"Cycle":3,"Lane":8,"Tile":1219,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF191","HCSMMF268","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.032 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1218 Request: {"Cycle":3,"Lane":8,"Tile":1218,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF229","HCSMMF228","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.035 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1228 Request: {"Cycle":3,"Lane":8,"Tile":1228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF210","HCSMMF213","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.037 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 1224 Request: {"Cycle":3,"Lane":8,"Tile":1224,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF256","HCSMMF267","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:17.045 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:17.051 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:26:17.154 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:17.154 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:26:17.191 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:17.196 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:26:17.284 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:17.290 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:26:17.311 -08 000000062 INF: FPGA: Recv MIOCOMPR
17-02-28 20:26:17.311 -08 000000042 INF: Compensator: Moved OutOfPath in 374 ms
17-02-28 20:26:17.311 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:26:17.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.328 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.328 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:17.328 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:17.377 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:17.377 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.377 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:26:17.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.378 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.379 -08 000000037 INF: ===================Move Tilt Motor 1===================
17-02-28 20:26:17.379 -08 000000077 INF: ===================Move Tilt Motor 2===================
17-02-28 20:26:17.379 -08 000000083 INF: ===================Move Tilt Motor 3===================
17-02-28 20:26:17.379 -08 000000037 INF: Tilt Motor 1: Moving to 5.0228 mm, started at 4.9411 mm, delta = 0.0817 mm
17-02-28 20:26:17.380 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:17.380 -08 000000077 INF: Tilt Motor 2: Moving to 5.3551 mm, started at 5.5613 mm, delta = -0.2062 mm
17-02-28 20:26:17.380 -08 000000083 INF: Tilt Motor 3: Moving to 5.3020 mm, started at 5.5085 mm, delta = -0.2065 mm
17-02-28 20:26:17.381 -08 000000077 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:17.383 -08 000000083 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:17.462 -08 000000099 INF: FPGA: Recv T1RD 19451
17-02-28 20:26:17.462 -08 000000099 INF: FPGA: Recv T2RD 21895
17-02-28 20:26:17.462 -08 000000099 INF: FPGA: Recv T3RD 21686
17-02-28 20:26:17.462 -08 000000083 INF: Tilt Motor 3: Encoder: at motor step 3614 + 2/6
17-02-28 20:26:17.462 -08 000000083 INF: Tilt Motor 3: Moving to 20874 encoder counts
17-02-28 20:26:17.462 -08 000000077 INF: Tilt Motor 2: Encoder: at motor step 3649 + 1/6
17-02-28 20:26:17.463 -08 000000077 INF: Tilt Motor 2: Moving to 21083 encoder counts
17-02-28 20:26:17.463 -08 000000083 INF: FPGA: Xmit T3MOVETO 20874\n
17-02-28 20:26:17.463 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3241 + 5/6
17-02-28 20:26:17.463 -08 000000037 INF: Tilt Motor 1: Moving to 19775 encoder counts
17-02-28 20:26:17.463 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:17.464 -08 000000037 INF: FPGA: Xmit T1MOVETO 19775\n
17-02-28 20:26:17.465 -08 000000077 INF: FPGA: Xmit T2MOVETO 21083\n
17-02-28 20:26:17.469 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:26:17.558 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:17.641 -08 000000035 INF: FPGA: Recv T1MOVETO 53
17-02-28 20:26:17.642 -08 000000037 INF: Tilt Motor 1: To move from 4.941 to 5.023 (0.082 mm) should take 54 steps, but required 53 steps (0.081 mm). Slippage = -0.002 mm (-0.02%)
17-02-28 20:26:17.642 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:17.701 -08 000000034 INF: FPGA: Recv T1RD 19770
17-02-28 20:26:17.701 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:26:17.701 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:17.763 -08 000000085 INF: FPGA: Recv T1RD 19770
17-02-28 20:26:17.763 -08 000000085 INF: FPGA: Recv T3MOVETO 135
17-02-28 20:26:17.763 -08 000000085 INF: FPGA: Recv T2MOVETO 135
17-02-28 20:26:17.763 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:26:17.763 -08 000000083 INF: Tilt Motor 3: To move from 5.508 to 5.302 (-0.206 mm) should take 135 steps, but required 135 steps (0.206 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:26:17.763 -08 000000077 INF: Tilt Motor 2: To move from 5.561 to 5.355 (-0.206 mm) should take 135 steps, but required 135 steps (0.206 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:26:17.763 -08 000000037 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:17.766 -08 000000083 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:17.767 -08 000000077 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:17.828 -08 000000087 INF: FPGA: Recv T1RD 19770
17-02-28 20:26:17.828 -08 000000087 INF: FPGA: Recv T3RD 20878
17-02-28 20:26:17.828 -08 000000087 INF: FPGA: Recv T2RD 21086
17-02-28 20:26:17.828 -08 000000037 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:26:17.828 -08 000000037 INF: Tilt Motor 1: After move to 5.0228, error = -0.0012, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:17.828 -08 000000083 INF: Tilt Motor 3: Encoder: at motor step 3479 + 4/6
17-02-28 20:26:17.828 -08 000000077 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:26:17.828 -08 000000083 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:17.828 -08 000000037 INF: Tilt Motor 1: Moved to 5.0216 after 448.7835 ms
17-02-28 20:26:17.829 -08 000000037 INF: ======================================
17-02-28 20:26:17.829 -08 000000077 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:17.839 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:26:17.890 -08 000000099 INF: FPGA: Recv T3RD 20878
17-02-28 20:26:17.890 -08 000000099 INF: FPGA: Recv T2RD 21086
17-02-28 20:26:17.890 -08 000000077 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:26:17.890 -08 000000083 INF: Tilt Motor 3: Encoder: at motor step 3479 + 4/6
17-02-28 20:26:17.890 -08 000000077 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:17.891 -08 000000083 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:17.950 -08 000000023 INF: FPGA: Recv T2RD 21086
17-02-28 20:26:17.950 -08 000000023 INF: FPGA: Recv T3RD 20878
17-02-28 20:26:17.950 -08 000000083 INF: Tilt Motor 3: Encoder: at motor step 3479 + 4/6
17-02-28 20:26:17.950 -08 000000077 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:26:17.950 -08 000000077 INF: Tilt Motor 2: After move to 5.3551, error = 0.0007, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:17.950 -08 000000077 INF: Tilt Motor 2: Moved to 5.3558 after 570.672 ms
17-02-28 20:26:17.950 -08 000000083 INF: Tilt Motor 3: After move to 5.3020, error = 0.0010, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:17.950 -08 000000083 INF: Tilt Motor 3: Moved to 5.3030 after 570.7697 ms
17-02-28 20:26:17.951 -08 000000077 INF: ======================================
17-02-28 20:26:17.951 -08 000000083 INF: ======================================
17-02-28 20:26:17.952 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:17.953 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.02278966876241, m2=5.35509691590693, m3=5.30201091590694
17-02-28 20:26:17.959 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:26:17.968 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:26:17.968 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:26:17.968 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:26:17.968 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:17.969 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:17.972 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:26:17.972 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:26:17.972 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:26:18.016 -08 000000072 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:18.016 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:18.017 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:26:18.017 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1554 mm
17-02-28 20:26:18.017 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:26:18.075 -08 000000023 INF: FPGA: Recv ZTRG 
17-02-28 20:26:18.075 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:26:18.137 -08 000000058 INF: FPGA: Recv ZYT 
17-02-28 20:26:18.137 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:26:18.137 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:26:18.202 -08 000000108 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:26:18.202 -08 000000108 INF: FPGA: Recv ZMV 
17-02-28 20:26:18.202 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:26:18.202 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.8806 ms
17-02-28 20:26:18.202 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:26:18.264 -08 000000059 INF: FPGA: Recv ZDACR 60292
17-02-28 20:26:18.264 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.4767 ms w/comms
17-02-28 20:26:18.264 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:18.264 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.7136 ms
17-02-28 20:26:18.265 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:18.266 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:26:18.279 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:26:18.279 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:18.279 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:18.279 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:26:18.279 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:26:18.326 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:18.350 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:18.351 -08 000000042 INF: Transformed XStagePosition from 69.18564 mm to 69.1856384277344 mm.
17-02-28 20:26:18.360 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:26:18.360 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:18.360 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:18.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:18.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:26:18.363 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:18.364 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = A_1
17-02-28 20:26:18.364 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:18.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:18.366 -08 000000091 INF: ===================Move X,Y===================
17-02-28 20:26:18.366 -08 000000095 INF: ===================MoveEmissionFilters===================
17-02-28 20:26:18.366 -08 000000091 INF: ===================Move X,Y, Parallel===================
17-02-28 20:26:18.366 -08 000000023 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:18.367 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:18.367 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:18.367 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:18.367 -08 000000069 INF: ===================Move X Motor without settling===================
17-02-28 20:26:18.367 -08 000000082 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:18.367 -08 000000069 INF: X Motor: Xmit PR VM\n
17-02-28 20:26:18.367 -08 000000023 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:18.367 -08 000000082 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9027 mm
17-02-28 20:26:18.367 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:18.367 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:18.368 -08 000000082 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:18.368 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:18.368 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:18.368 -08 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:26:18.368 -08 000000066 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:26:18.368 -08 000000034 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:26:18.368 -08 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:26:18.368 -08 000000066 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:26:18.369 -08 000000051 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:26:18.369 -08 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:26:18.369 -08 000000047 INF: ======================================
17-02-28 20:26:18.369 -08 000000066 INF: ======================================
17-02-28 20:26:18.369 -08 000000051 INF: ======================================
17-02-28 20:26:18.369 -08 000000033 INF: ======================================
17-02-28 20:26:18.370 -08 000000034 INF: ======================================
17-02-28 20:26:18.370 -08 000000023 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:18.370 -08 000000050 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:18.371 -08 000000033 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:26:18.371 -08 000000072 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:26:18.371 -08 000000023 INF: ======================================
17-02-28 20:26:18.372 -08 000000072 INF: ======================================
17-02-28 20:26:18.372 -08 000000050 INF: ======================================
17-02-28 20:26:18.372 -08 000000033 INF: ======================================
17-02-28 20:26:18.373 -08 000000045 INF: ======================================
17-02-28 20:26:18.373 -08 000000030 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:18.374 -08 000000059 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:18.374 -08 000000030 INF: ======================================
17-02-28 20:26:18.375 -08 000000059 INF: ======================================
17-02-28 20:26:18.376 -08 000000095 INF: ======================================
17-02-28 20:26:18.452 -08 000000069 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:26:18.452 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:18.452 -08 000000082 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:18.452 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:18.452 -08 000000069 INF: X Motor: Xmit PR VI\n
17-02-28 20:26:18.514 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:18.514 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:18.514 -08 000000069 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:26:18.514 -08 000000069 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:26:18.514 -08 000000069 INF: X Motor: Moving to 69.1856 mm @15.000 mm/sec, started at 89.1050 mm
17-02-28 20:26:18.514 -08 000000069 INF: X Motor: Xmit MA 4172\n
17-02-28 20:26:18.576 -08 000000069 INF: X Motor: Recv MA 4172\r\n>
17-02-28 20:26:18.576 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:26:18.576 -08 000000082 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:18.576 -08 000000069 INF: X Motor: WaitUntilStopped 61328
17-02-28 20:26:18.576 -08 000000082 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:26:18.576 -08 000000082 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:26:18.645 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:18.645 -08 000000082 INF: Y Motor: Start the move command
17-02-28 20:26:18.645 -08 000000082 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:18.701 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:18.701 -08 000000082 INF: Y Motor: WaitUntilStopped 61985
17-02-28 20:26:18.701 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:18.828 -08 000000082 INF: Y Motor: Unshifted Position: 1063864
17-02-28 20:26:18.878 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.002 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.138 -08 000000082 INF: Y Motor: Unshifted Position: 1763594
17-02-28 20:26:19.188 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.316 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.452 -08 000000082 INF: Y Motor: Unshifted Position: 2544425
17-02-28 20:26:19.502 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.626 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.767 -08 000000082 INF: Y Motor: Unshifted Position: 3326890
17-02-28 20:26:19.817 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:19.941 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:20.074 -08 000000082 INF: Y Motor: Unshifted Position: 4105258
17-02-28 20:26:20.124 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:20.255 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:20.388 -08 000000082 INF: Y Motor: Unshifted Position: 4882730
17-02-28 20:26:20.438 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:20.450 -08 000000069 INF: X Motor: Xmit PR ER\n
17-02-28 20:26:20.511 -08 000000069 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:26:20.511 -08 000000069 INF: X Motor: Moved to 69.1855 after 1935 ms
17-02-28 20:26:20.511 -08 000000069 INF: ======================================
17-02-28 20:26:20.561 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:20.697 -08 000000082 INF: Y Motor: Unshifted Position: 5665470
17-02-28 20:26:20.748 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:20.876 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:21.011 -08 000000082 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:26:21.061 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:21.197 -08 000000082 INF: Y Motor: Unshifted Position: 5953352
17-02-28 20:26:21.197 -08 000000082 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:21.197 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:21.259 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:26:21.259 -08 000000082 INF: Y Motor: Moved to 64.5335 after 2558 ms
17-02-28 20:26:21.259 -08 000000082 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:21.324 -08 000000082 INF: Y Motor: Recv v 4096\r
17-02-28 20:26:21.324 -08 000000082 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:21.324 -08 000000082 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:21.386 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:26:21.386 -08 000000082 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:21.386 -08 000000082 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:21.448 -08 000000082 INF: Y Motor: Recv v 402653184\r
17-02-28 20:26:21.448 -08 000000082 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:26:21.448 -08 000000082 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:21.448 -08 000000082 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:21.510 -08 000000082 INF: Y Motor: Recv v 0\r
17-02-28 20:26:21.510 -08 000000082 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:21.510 -08 000000082 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:21.510 -08 000000082 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:21.572 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:21.572 -08 000000082 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:21.572 -08 000000082 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:21.634 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:21.634 -08 000000082 INF: ======================================
17-02-28 20:26:21.636 -08 000000091 INF: ===================Move X,Y===================
17-02-28 20:26:21.638 -08 000000091 INF: ======================================
17-02-28 20:26:21.640 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:21.641 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:21.641 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:26:21.642 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:26:21.696 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:21.696 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:26:21.760 -08 000000091 INF: FPGA: Recv ZFREQCL
17-02-28 20:26:21.760 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:26:21.760 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:21.761 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:21.819 -08 000000059 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:26:21.819 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:26:21.819 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:21.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:21.821 -08 000000036 INF: ===================Set YMotor gains for scans===================
17-02-28 20:26:21.821 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:26:21.822 -08 000000036 INF: ======================================
17-02-28 20:26:21.823 -08 000000074 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:26:21.823 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:26:21.825 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:26:21.826 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:26:21.827 -08 000000074 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:26:21.881 -08 000000062 INF: FPGA: Recv TDIYPOS
17-02-28 20:26:21.881 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:26:21.883 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:26:21.883 -08 000000074 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:26:21.946 -08 000000023 INF: FPGA: Recv TDIYARM2
17-02-28 20:26:21.947 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:26:21.949 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:26:21.951 -08 000000074 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:26:21.952 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:26:21.954 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:26:21.955 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:26:21.956 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:22.327 -08 000000074 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:26:22.327 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:26:22.327 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:22.342 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:26:22.344 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:22.723 -08 000000074 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:26:22.723 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:26:22.723 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:22.738 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:26:22.740 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:26:22.741 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:26:22.742 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:22.743 -08 000000074 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:26:22.743 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:22.745 -08 000000074 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:26:22.745 -08 000000074 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:26:22.745 -08 000000074 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:26:22.745 -08 000000074 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:26:22.757 -08 000000087 INF: FPGA: Recv ZYT 
17-02-28 20:26:22.757 -08 000000074 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:26:22.757 -08 000000074 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:26:22.818 -08 000000066 INF: FPGA: Recv ZARM
17-02-28 20:26:22.818 -08 000000074 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.0859 ms
17-02-28 20:26:22.818 -08 000000074 INF: Z Motor: ArmAbsStepped took 73.1363 ms
17-02-28 20:26:22.818 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:22.820 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:26:22.821 -08 000000074 INF: ======================================
17-02-28 20:26:22.822 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:22.823 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:22.823 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:22.824 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:22.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:22.826 -08 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:26:22.826 -08 000000037 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:26:22.826 -08 000000037 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:26:22.826 -08 000000037 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:26:22.826 -08 000000037 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:26:22.827 -08 000000054 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:26:22.827 -08 000000054 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:26:22.827 -08 000000054 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:26:22.827 -08 000000054 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:26:22.831 -08 000000054 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:26:23.193 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:26:23.193 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:26:23.193 -08 000000037 INF: Excitation Filter 1: Moved -107 steps in 366.5148 ms
17-02-28 20:26:23.193 -08 000000054 INF: Excitation Filter 2: Moved -107 steps in 366.0699 ms
17-02-28 20:26:23.193 -08 000000054 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.2847 ms
17-02-28 20:26:23.193 -08 000000054 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.3787 ms
17-02-28 20:26:23.193 -08 000000037 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.625 ms
17-02-28 20:26:23.193 -08 000000037 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 367.0056 ms
17-02-28 20:26:23.194 -08 000000054 INF: ======================================
17-02-28 20:26:23.194 -08 000000037 INF: ======================================
17-02-28 20:26:23.195 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:23.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:23.197 -08 000000077 INF: ===================Serial===================
17-02-28 20:26:23.197 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:26:23.198 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:23.198 -08 000000077 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:26:23.198 -08 000000058 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:26:23.198 -08 000000062 INF: ===================Camera TDI, Parallel===================
17-02-28 20:26:23.198 -08 000000077 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:26:23.198 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:23.198 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:23.198 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:23.199 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:26:23.199 -08 000000060 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:26:23.199 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:26:23.201 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.201 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.203 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.203 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.205 -08 000000060 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:26:23.257 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:26:23.257 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:23.257 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:23.319 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:26:23.319 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:23.351 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.351 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.353 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.353 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.382 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:26:23.382 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:23.382 -08 000000058 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:26:23.382 -08 000000058 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:26:23.443 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:26:23.443 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:26:23.443 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:23.501 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.501 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.503 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.503 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.508 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:26:23.508 -08 000000058 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:26:23.508 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:23.632 -08 000000058 INF: Y Motor: Unshifted Position: 5934881
17-02-28 20:26:23.651 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.651 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.653 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:23.653 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:23.682 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:23.801 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:26:23.801 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:26:23.801 -08 000000030 INF: ===================Camera #0 Frame #1===================
17-02-28 20:26:23.803 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:26:23.803 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:26:23.803 -08 000000064 INF: ===================Camera #2 Frame #1===================
17-02-28 20:26:23.806 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:23.942 -08 000000058 INF: Y Motor: Unshifted Position: 5888227
17-02-28 20:26:23.954 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:26:23.954 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:26:23.954 -08 000000030 INF: ===================Camera #0 Frame #3===================
17-02-28 20:26:23.956 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:26:23.956 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:26:23.956 -08 000000064 INF: ===================Camera #2 Frame #3===================
17-02-28 20:26:23.992 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:24.110 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:26:24.110 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:26:24.110 -08 000000030 INF: ===================Camera #0 Frame #4===================
17-02-28 20:26:24.112 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:26:24.112 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:26:24.112 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:26:24.117 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:24.256 -08 000000058 INF: Y Motor: Unshifted Position: 5841226
17-02-28 20:26:24.263 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:24.263 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:24.263 -08 000000030 INF: ===================Camera #0 Frame #5===================
17-02-28 20:26:24.265 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:24.265 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:24.265 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:26:24.306 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:24.316 -08 000000051 INF: FPGA: Recv ZWAIT 
17-02-28 20:26:24.316 -08 000000051 INF: FPGA: Recv TDIYWAIT
17-02-28 20:26:24.316 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:24.316 -08 000000077 INF: ===================Serial===================
17-02-28 20:26:24.318 -08 000000060 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:26:24.318 -08 000000077 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:26:24.319 -08 000000077 INF: ===================Serial===================
17-02-28 20:26:24.319 -08 000000072 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:26:24.319 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:26:24.319 -08 000000072 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:26:24.319 -08 000000072 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:26:24.319 -08 000000072 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:26:24.319 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:26:24.319 -08 000000072 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:26:24.319 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:26:24.319 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:26:24.320 -08 000000077 INF: ======================================
17-02-28 20:26:24.322 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:26:24.416 -08 000000030 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:26:24.416 -08 000000030 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:26:24.416 -08 000000030 INF: ===================Camera #0 Frame #6===================
17-02-28 20:26:24.418 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:26:24.418 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:26:24.418 -08 000000064 INF: ===================Camera #2 Frame #6===================
17-02-28 20:26:24.419 -08 000000030 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:26:24.420 -08 000000030 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:24.421 -08 000000064 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:26:24.422 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:24.432 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:24.457 -08 000000030 INF: Camera #0 ReleaseBuffer
17-02-28 20:26:24.457 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:26:24.458 -08 000000030 INF: ======================================
17-02-28 20:26:24.467 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:26:24.467 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:26:24.468 -08 000000064 INF: ======================================
17-02-28 20:26:24.470 -08 000000062 INF: ===================Camera TDI===================
17-02-28 20:26:24.471 -08 000000062 INF: ======================================
17-02-28 20:26:24.566 -08 000000058 INF: Y Motor: Unshifted Position: 5797060
17-02-28 20:26:24.616 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:24.691 -08 000000037 INF: FPGA: Recv EX1MV
17-02-28 20:26:24.691 -08 000000037 INF: FPGA: Recv EX2MV
17-02-28 20:26:24.691 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 371.577 ms
17-02-28 20:26:24.691 -08 000000072 INF: Excitation Filter 1: Moved 107 steps in 371.8115 ms
17-02-28 20:26:24.691 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.8538 ms
17-02-28 20:26:24.691 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.9667 ms
17-02-28 20:26:24.691 -08 000000072 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.0537 ms
17-02-28 20:26:24.691 -08 000000072 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1385 ms
17-02-28 20:26:24.692 -08 000000082 INF: ======================================
17-02-28 20:26:24.692 -08 000000072 INF: ======================================
17-02-28 20:26:24.693 -08 000000060 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:24.694 -08 000000060 INF: ======================================
17-02-28 20:26:24.755 -08 000000058 INF: Y Motor: Unshifted Position: 5797043
17-02-28 20:26:24.755 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:24.755 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:24.817 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:26:24.817 -08 000000058 INF: Y Motor: Moved to 62.9704 after 1309 ms
17-02-28 20:26:24.817 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:24.879 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:26:24.879 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:24.879 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:24.941 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:26:24.941 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:24.941 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:25.003 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:26:25.003 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:26:25.003 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:25.003 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:25.068 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:26:25.068 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:25.068 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:25.068 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:25.131 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:26:25.131 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:25.131 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:25.192 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:26:25.192 -08 000000058 INF: ======================================
17-02-28 20:26:25.193 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:25.195 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:25.196 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.197 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:26:25.252 -08 000000089 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:26:25.252 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:25.316 -08 000000069 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:26:25.317 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:26:25.376 -08 000000102 INF: FPGA: Recv ZADCR 2424
17-02-28 20:26:25.376 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:26:25.376 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:26:25.438 -08 000000039 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:26:25.438 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:26:25.438 -08 000000042 INF: TDIScan finished after 7087.7032 ms
17-02-28 20:26:25.438 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:26:25.438 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:26:25.439 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:26:25.500 -08 000000095 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:26:25.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.502 -08 000000054 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:26:25.502 -08 000000062 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:26:25.502 -08 000000082 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:26:25.503 -08 000000054 INF: ======================================
17-02-28 20:26:25.503 -08 000000062 INF: ======================================
17-02-28 20:26:25.503 -08 000000082 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:25.503 -08 000000082 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:25.567 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:26:25.567 -08 000000082 INF: ======================================
17-02-28 20:26:25.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.570 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.571 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:26:25.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.602 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:26:25.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:26:25.659 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:26:25.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:25.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:25.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:25.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:26:25.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:25.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:26:25.696 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:26:26.450 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1, Selecting focus point===================
17-02-28 20:26:26.474 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0802327055185176Best Z position at top surface = -0.153579304925347Best Z position at top surface + compensator offset = -0.130879304925347 C:3,L:1,B
17-02-28 20:26:26.475 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.153579304925347
17-02-28 20:26:26.475 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94588
17-02-28 20:26:26.475 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0802327055185176
17-02-28 20:26:26.475 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59295
17-02-28 20:26:26.475 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0802327055185176.
17-02-28 20:26:26.475 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:26.621 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:26:26.621 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:26:26.688 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:26.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Focus Point 1===================
17-02-28 20:26:26.690 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:26.690 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:26.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:26.692 -08 000000083 INF: ===================Move Tilt Motor 1===================
17-02-28 20:26:26.692 -08 000000072 INF: ===================Move Tilt Motor 2===================
17-02-28 20:26:26.692 -08 000000054 INF: ===================Move Tilt Motor 3===================
17-02-28 20:26:26.692 -08 000000083 INF: Tilt Motor 1: Moving to 5.0228 mm, started at 5.0216 mm, delta = 0.0012 mm
17-02-28 20:26:26.692 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:26.692 -08 000000072 INF: ======================================
17-02-28 20:26:26.692 -08 000000054 INF: Tilt Motor 3: Moving to 5.3020 mm, started at 5.3030 mm, delta = -0.0010 mm
17-02-28 20:26:26.699 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:26.750 -08 000000066 INF: FPGA: Recv T1RD 19770
17-02-28 20:26:26.750 -08 000000066 INF: FPGA: Recv T3RD 20877
17-02-28 20:26:26.750 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:26:26.750 -08 000000054 INF: Tilt Motor 3: Moving to 20874 encoder counts
17-02-28 20:26:26.750 -08 000000054 INF: FPGA: Xmit T3MOVETO 20874\n
17-02-28 20:26:26.750 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3295 + 0/6
17-02-28 20:26:26.750 -08 000000083 INF: Tilt Motor 1: Moving to 19775 encoder counts
17-02-28 20:26:26.751 -08 000000083 INF: FPGA: Xmit T1MOVETO 19775\n
17-02-28 20:26:26.814 -08 000000069 INF: RunCopyService queue size at 2/28/2017 8:26:26 PM is 2
17-02-28 20:26:26.874 -08 000000077 INF: FPGA: Recv T3MOVETO 0
17-02-28 20:26:26.874 -08 000000077 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:26:26.874 -08 000000083 INF: Tilt Motor 1: To move from 5.022 to 5.023 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:26:26.874 -08 000000054 INF: Tilt Motor 3: To move from 5.303 to 5.302 (-0.001 mm) should take 0 steps, but required 0 steps (0.000 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:26:26.874 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:26.875 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:26.936 -08 000000062 INF: FPGA: Recv T1RD 19776
17-02-28 20:26:26.936 -08 000000062 INF: FPGA: Recv T3RD 20877
17-02-28 20:26:26.936 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:26:26.936 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:26.936 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:26:26.937 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:27.003 -08 000000090 INF: FPGA: Recv T3RD 20877
17-02-28 20:26:27.003 -08 000000090 INF: FPGA: Recv T1RD 19776
17-02-28 20:26:27.004 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:26:27.004 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:26:27.004 -08 000000054 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:27.005 -08 000000083 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:27.061 -08 000000069 INF: FPGA: Recv T3RD 20877
17-02-28 20:26:27.061 -08 000000069 INF: FPGA: Recv T1RD 19776
17-02-28 20:26:27.061 -08 000000054 INF: Tilt Motor 3: Encoder: at motor step 3479 + 3/6
17-02-28 20:26:27.061 -08 000000083 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:26:27.061 -08 000000083 INF: Tilt Motor 1: After move to 5.0228, error = 0.0003, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:27.061 -08 000000083 INF: Tilt Motor 1: Moved to 5.0231 after 369.3428 ms
17-02-28 20:26:27.061 -08 000000054 INF: Tilt Motor 3: After move to 5.3020, error = 0.0007, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:27.061 -08 000000054 INF: Tilt Motor 3: Moved to 5.3028 after 369.0881 ms
17-02-28 20:26:27.061 -08 000000083 INF: ======================================
17-02-28 20:26:27.062 -08 000000054 INF: ======================================
17-02-28 20:26:27.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:27.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:27.064 -08 000000042 INF: Lane 1 was flagged for detilt operations. Moved to tilt positions: m1=5.02278966876241, m2=5.35509691590693, m3=5.30201091590694
17-02-28 20:26:27.064 -08 000000042 INF: ETF Best Z: -0.0802327 mm (21032 DAC)
17-02-28 20:26:27.064 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:27.065 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:27.065 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:26:27.066 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:27.066 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:27.504 -08 000000042 INF: Swath 1 position calculated to be: {X=68.62818, Y=39.78827} from estimated center X= 69.147, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:26:27.504 -08 000000042 INF: Swath 2 position calculated to be: {X=69.73618, Y=39.78827} from estimated center X= 69.147, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:26:27.510 -08 000000042 INF: Swath 0: Converted transform from (-47.28378, 9.470146) pixels to (-0.016215, 0.003105) mm.
17-02-28 20:26:27.515 -08 000000042 INF: Swath 1: Converted transform from (-75.0111, 9.380068) pixels to (-0.025875, 0.003105) mm.
17-02-28 20:26:27.516 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:26:27.517 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:26:27.517 -08 000000042 INF: Transformed XStagePosition from 68.62818 mm to 68.6119664572179 mm.
17-02-28 20:26:27.528 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.581382801408 mm.
17-02-28 20:26:27.528 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.381382801408 mm.
17-02-28 20:26:27.529 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4721328014079 mm.
17-02-28 20:26:27.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:27.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:26:27.531 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:27.531 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = A_1
17-02-28 20:26:27.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:27.537 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:27.538 -08 000000023 INF: ===================MoveEmissionFilters===================
17-02-28 20:26:27.538 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:26:27.538 -08 000000108 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:27.539 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:27.539 -08 000000037 INF: ===================Move X,Y, Parallel===================
17-02-28 20:26:27.539 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:27.539 -08 000000085 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:27.539 -08 000000108 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:26:27.539 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:27.539 -08 000000108 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:26:27.539 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:27.540 -08 000000108 INF: Z Motor: Moving to -0.1002 mm, started at -0.0100 mm
17-02-28 20:26:27.540 -08 000000062 INF: ===================Move X Motor without settling===================
17-02-28 20:26:27.540 -08 000000108 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:26:27.540 -08 000000085 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:27.540 -08 000000035 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:27.540 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:27.540 -08 000000062 INF: X Motor: Xmit PR VM\n
17-02-28 20:26:27.540 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:27.540 -08 000000035 INF: Y Motor: Moving to 64.5814 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:26:27.540 -08 000000035 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:27.540 -08 000000035 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:27.540 -08 000000050 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:26:27.540 -08 000000039 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:26:27.541 -08 000000091 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:26:27.541 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:26:27.541 -08 000000050 INF: ======================================
17-02-28 20:26:27.541 -08 000000095 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:26:27.541 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:26:27.541 -08 000000036 INF: ======================================
17-02-28 20:26:27.541 -08 000000051 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:26:27.542 -08 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:26:27.542 -08 000000047 INF: ======================================
17-02-28 20:26:27.542 -08 000000095 INF: ======================================
17-02-28 20:26:27.542 -08 000000051 INF: ======================================
17-02-28 20:26:27.542 -08 000000091 INF: ======================================
17-02-28 20:26:27.543 -08 000000064 INF: ======================================
17-02-28 20:26:27.543 -08 000000083 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:27.543 -08 000000085 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:27.543 -08 000000039 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:26:27.543 -08 000000099 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:27.544 -08 000000039 INF: ======================================
17-02-28 20:26:27.544 -08 000000083 INF: ======================================
17-02-28 20:26:27.544 -08 000000085 INF: ======================================
17-02-28 20:26:27.545 -08 000000099 INF: ======================================
17-02-28 20:26:27.545 -08 000000069 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:27.546 -08 000000069 INF: ======================================
17-02-28 20:26:27.547 -08 000000023 INF: ======================================
17-02-28 20:26:27.560 -08 000000058 INF: FPGA: Recv ZTRG 
17-02-28 20:26:27.560 -08 000000108 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:26:27.625 -08 000000085 INF: FPGA: Recv ZYT 
17-02-28 20:26:27.625 -08 000000108 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:26:27.625 -08 000000108 INF: FPGA: Xmit ZMV 26275\n
17-02-28 20:26:27.627 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:26:27.627 -08 000000035 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:27.627 -08 000000035 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:27.628 -08 000000062 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:26:27.628 -08 000000062 INF: X Motor: Xmit PR VI\n
17-02-28 20:26:27.687 -08 000000058 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:26:27.687 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:26:27.689 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:26:27.689 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:27.690 -08 000000062 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:26:27.690 -08 000000062 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:26:27.690 -08 000000062 INF: X Motor: Moving to 68.6120 mm @15.000 mm/sec, started at 69.1855 mm
17-02-28 20:26:27.690 -08 000000062 INF: X Motor: Xmit MA 3937\n
17-02-28 20:26:27.749 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:26:27.749 -08 000000108 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.011 ms
17-02-28 20:26:27.749 -08 000000108 INF: FPGA: Xmit ZDACR\n
17-02-28 20:26:27.751 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:26:27.751 -08 000000035 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:27.751 -08 000000062 INF: X Motor: Recv MA 3937\r\n>
17-02-28 20:26:27.751 -08 000000035 INF: Y Motor: Set target position to 5958138 encoder counts
17-02-28 20:26:27.751 -08 000000035 INF: Y Motor: Xmit s r0xca 5958138\r
17-02-28 20:26:27.751 -08 000000062 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:26:27.811 -08 000000077 INF: FPGA: Recv ZDACR 26275
17-02-28 20:26:27.811 -08 000000108 INF: Z Motor: MoveAndTrigger took 271.3702 ms w/comms
17-02-28 20:26:27.811 -08 000000108 INF: Z Motor: After move to -0.1002, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:27.811 -08 000000108 INF: Z Motor: MoveAbsStepped took 271.5576 ms
17-02-28 20:26:27.811 -08 000000108 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:27.813 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:26:27.813 -08 000000108 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:26:27.813 -08 000000035 INF: Y Motor: Start the move command
17-02-28 20:26:27.813 -08 000000035 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:27.813 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:26:27.814 -08 000000023 INF: ===================Camera Arm TDI===================
17-02-28 20:26:27.814 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:27.815 -08 000000023 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:27.815 -08 000000039 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:26:27.815 -08 000000039 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:27.815 -08 000000023 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:27.816 -08 000000039 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:26:27.873 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:26:27.874 -08 000000039 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:27.874 -08 000000039 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:26:27.875 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:26:27.875 -08 000000035 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:26:27.875 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:27.935 -08 000000045 INF: FPGA: Recv TDIBB
17-02-28 20:26:27.935 -08 000000039 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:27.936 -08 000000039 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:26:27.937 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:27.938 -08 000000039 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:26:27.939 -08 000000039 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:26:27.939 -08 000000039 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:26:27.997 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:27.997 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:27.999 -08 000000035 INF: Y Motor: Unshifted Position: 5878546
17-02-28 20:26:27.999 -08 000000039 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:26:27.999 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:28.001 -08 000000039 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:26:28.001 -08 000000039 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:26:28.001 -08 000000039 INF: Z Motor: Arming to move to -0.0602 mm
17-02-28 20:26:28.001 -08 000000039 INF: FPGA: Xmit ZYT 6438138 4\n
17-02-28 20:26:28.049 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:28.062 -08 000000045 INF: FPGA: Recv ZYT 
17-02-28 20:26:28.062 -08 000000039 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6378546 enc / 63.785 mm / ) = 6438138 enc / 64.381 mm
17-02-28 20:26:28.062 -08 000000039 INF: FPGA: Xmit ZARM 15789\n
17-02-28 20:26:28.123 -08 000000099 INF: FPGA: Recv ZARM
17-02-28 20:26:28.123 -08 000000039 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.9349 ms
17-02-28 20:26:28.123 -08 000000039 INF: Z Motor: ArmAbsStepped took 121.9261 ms
17-02-28 20:26:28.123 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:28.124 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:26:28.126 -08 000000039 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:26:28.126 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:26:28.128 -08 000000039 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:26:28.128 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:26:28.129 -08 000000039 INF: ======================================
17-02-28 20:26:28.176 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:28.186 -08 000000062 INF: X Motor: Xmit PR ER\n
17-02-28 20:26:28.251 -08 000000062 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:26:28.251 -08 000000062 INF: X Motor: Moved to 68.6118 after 500 ms
17-02-28 20:26:28.251 -08 000000062 INF: ======================================
17-02-28 20:26:28.313 -08 000000035 INF: Y Motor: Unshifted Position: 5958140
17-02-28 20:26:28.313 -08 000000035 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:28.313 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:28.376 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:26:28.376 -08 000000035 INF: Y Motor: Moved to 64.5814 after 501 ms
17-02-28 20:26:28.376 -08 000000035 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:28.437 -08 000000035 INF: Y Motor: Recv v 4096\r
17-02-28 20:26:28.437 -08 000000035 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:28.437 -08 000000035 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:28.499 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:26:28.499 -08 000000035 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:28.499 -08 000000035 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:28.561 -08 000000035 INF: Y Motor: Recv v 402653184\r
17-02-28 20:26:28.561 -08 000000035 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:26:28.561 -08 000000035 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:28.561 -08 000000035 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:28.623 -08 000000035 INF: Y Motor: Recv v 0\r
17-02-28 20:26:28.623 -08 000000035 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:28.623 -08 000000035 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:28.623 -08 000000035 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:28.688 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:26:28.688 -08 000000035 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:28.688 -08 000000035 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:28.750 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:26:28.750 -08 000000035 INF: ======================================
17-02-28 20:26:28.751 -08 000000037 INF: ===================Move X,Y===================
17-02-28 20:26:28.752 -08 000000037 INF: ======================================
17-02-28 20:26:28.788 -08 000000023 INF: Camera #0 AttachBuffer (imageDataPtr = 56915988528 imgPtr = 56915988528 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:26:28.788 -08 000000023 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:26:28.788 -08 000000023 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:28.803 -08 000000023 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:28.805 -08 000000023 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:29.858 -08 000000023 INF: Camera #2 AttachBuffer (imageDataPtr = 58727927856 imgPtr = 59633897520 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:26:29.858 -08 000000023 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:26:29.858 -08 000000023 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:29.873 -08 000000023 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:29.875 -08 000000023 INF: ===================Camera Arm TDI===================
17-02-28 20:26:29.876 -08 000000023 INF: ======================================
17-02-28 20:26:29.877 -08 000000108 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:29.878 -08 000000108 INF: ======================================
17-02-28 20:26:29.879 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:29.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:29.880 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:26:29.880 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:26:29.934 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:29.934 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:26:29.996 -08 000000087 INF: FPGA: Recv ZFREQCL
17-02-28 20:26:29.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:26:29.997 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:29.997 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:30.057 -08 000000077 INF: FPGA: Recv TDIYERD 6458139
17-02-28 20:26:30.057 -08 000000042 INF: Before scan, Y encoder from FPGA = 6458139 counts (64.581 mm)
17-02-28 20:26:30.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:30.057 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:30.058 -08 000000099 INF: ===================TDI FPGA Arm===================
17-02-28 20:26:30.058 -08 000000078 INF: ===================Set YMotor gains for scans===================
17-02-28 20:26:30.059 -08 000000078 INF: ======================================
17-02-28 20:26:30.059 -08 000000099 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:30.060 -08 000000099 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:26:30.060 -08 000000099 INF: FPGA: Xmit TDIYPOS 6347213\n
17-02-28 20:26:30.121 -08 000000036 INF: FPGA: Recv TDIYPOS
17-02-28 20:26:30.121 -08 000000099 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:30.122 -08 000000099 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:26:30.122 -08 000000099 INF: FPGA: Xmit TDIYARM3 139264 6438138 1 1\n
17-02-28 20:26:30.183 -08 000000051 INF: FPGA: Recv TDIYARM3
17-02-28 20:26:30.183 -08 000000099 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:30.184 -08 000000099 INF: ===================TDI FPGA Arm===================
17-02-28 20:26:30.185 -08 000000099 INF: ======================================
17-02-28 20:26:30.186 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:30.187 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:30.187 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:30.187 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:30.188 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:30.189 -08 000000058 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:26:30.189 -08 000000047 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:26:30.189 -08 000000058 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:26:30.189 -08 000000058 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:26:30.189 -08 000000058 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:26:30.189 -08 000000058 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:26:30.189 -08 000000047 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:26:30.189 -08 000000047 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:26:30.189 -08 000000047 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:26:30.193 -08 000000047 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:26:30.555 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:26:30.555 -08 000000089 INF: FPGA: Recv EX1MV
17-02-28 20:26:30.555 -08 000000047 INF: Excitation Filter 1: Moved -107 steps in 365.7635 ms
17-02-28 20:26:30.555 -08 000000047 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.8529 ms
17-02-28 20:26:30.555 -08 000000047 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.9236 ms
17-02-28 20:26:30.555 -08 000000058 INF: Excitation Filter 2: Moved -107 steps in 365.9673 ms
17-02-28 20:26:30.555 -08 000000058 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.1642 ms
17-02-28 20:26:30.555 -08 000000058 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.2338 ms
17-02-28 20:26:30.555 -08 000000047 INF: ======================================
17-02-28 20:26:30.555 -08 000000058 INF: ======================================
17-02-28 20:26:30.556 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:30.558 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:30.558 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:26:30.558 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:30.559 -08 000000039 INF: ===================FPGA Z Wait===================
17-02-28 20:26:30.559 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:30.559 -08 000000091 INF: Y Motor: Moving to 14.9330 mm @6.500 mm/sec, started at 64.5814 mm
17-02-28 20:26:30.559 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:30.559 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:30.559 -08 000000036 INF: ===================Camera TDI, Parallel===================
17-02-28 20:26:30.559 -08 000000083 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:26:30.559 -08 000000083 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:26:30.560 -08 000000072 INF: ===================Camera TDI===================
17-02-28 20:26:30.560 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:26:30.561 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:30.561 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:30.562 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:30.562 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:30.562 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:26:30.622 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:26:30.622 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:30.622 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:30.684 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:26:30.684 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:30.711 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:30.711 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:30.712 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:30.712 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:30.748 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:26:30.748 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:30.748 -08 000000091 INF: Y Motor: Set target position to 993305 encoder counts
17-02-28 20:26:30.748 -08 000000091 INF: Y Motor: Xmit s r0xca 993305\r
17-02-28 20:26:30.808 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:26:30.808 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:26:30.808 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:30.861 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:30.861 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:30.862 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:30.862 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:30.870 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:26:30.870 -08 000000091 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:26:30.870 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:30.930 -08 000000045 INF: FPGA: Recv ZWAIT 
17-02-28 20:26:30.930 -08 000000039 INF: ======================================
17-02-28 20:26:30.994 -08 000000091 INF: Y Motor: Unshifted Position: 5896291
17-02-28 20:26:31.011 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:26:31.011 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:26:31.011 -08 000000072 INF: ===================Camera #0 Frame #4===================
17-02-28 20:26:31.012 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:26:31.012 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:26:31.012 -08 000000085 INF: ===================Camera #2 Frame #4===================
17-02-28 20:26:31.044 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:31.169 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:31.174 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:26:31.174 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:26:31.174 -08 000000072 INF: ===================Camera #0 Frame #10===================
17-02-28 20:26:31.175 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:26:31.175 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:26:31.175 -08 000000085 INF: ===================Camera #2 Frame #10===================
17-02-28 20:26:31.308 -08 000000091 INF: Y Motor: Unshifted Position: 5691962
17-02-28 20:26:31.344 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:26:31.344 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:26:31.344 -08 000000072 INF: ===================Camera #0 Frame #17===================
17-02-28 20:26:31.346 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:26:31.346 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:26:31.346 -08 000000085 INF: ===================Camera #2 Frame #17===================
17-02-28 20:26:31.358 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:31.482 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:31.518 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:26:31.518 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:26:31.518 -08 000000072 INF: ===================Camera #0 Frame #23===================
17-02-28 20:26:31.520 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:26:31.520 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:26:31.520 -08 000000085 INF: ===================Camera #2 Frame #23===================
17-02-28 20:26:31.620 -08 000000091 INF: Y Motor: Unshifted Position: 5489823
17-02-28 20:26:31.670 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:31.688 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:26:31.688 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:26:31.688 -08 000000072 INF: ===================Camera #0 Frame #29===================
17-02-28 20:26:31.690 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:26:31.690 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:26:31.690 -08 000000085 INF: ===================Camera #2 Frame #29===================
17-02-28 20:26:31.795 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:31.858 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:26:31.858 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:26:31.858 -08 000000072 INF: ===================Camera #0 Frame #36===================
17-02-28 20:26:31.860 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:26:31.860 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:26:31.860 -08 000000085 INF: ===================Camera #2 Frame #36===================
17-02-28 20:26:31.931 -08 000000091 INF: Y Motor: Unshifted Position: 5285718
17-02-28 20:26:31.981 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:32.032 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:26:32.032 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:26:32.032 -08 000000072 INF: ===================Camera #0 Frame #42===================
17-02-28 20:26:32.034 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:26:32.034 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:26:32.034 -08 000000085 INF: ===================Camera #2 Frame #42===================
17-02-28 20:26:32.105 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:32.202 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:26:32.202 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:26:32.202 -08 000000072 INF: ===================Camera #0 Frame #48===================
17-02-28 20:26:32.204 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:26:32.204 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:26:32.204 -08 000000085 INF: ===================Camera #2 Frame #48===================
17-02-28 20:26:32.244 -08 000000091 INF: Y Motor: Unshifted Position: 5083348
17-02-28 20:26:32.294 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:32.372 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:26:32.372 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:26:32.372 -08 000000072 INF: ===================Camera #0 Frame #55===================
17-02-28 20:26:32.375 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:26:32.375 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:26:32.375 -08 000000085 INF: ===================Camera #2 Frame #55===================
17-02-28 20:26:32.418 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:32.546 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:26:32.546 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:26:32.546 -08 000000072 INF: ===================Camera #0 Frame #61===================
17-02-28 20:26:32.549 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:26:32.549 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:26:32.549 -08 000000085 INF: ===================Camera #2 Frame #61===================
17-02-28 20:26:32.554 -08 000000091 INF: Y Motor: Unshifted Position: 4881850
17-02-28 20:26:32.604 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:32.715 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:26:32.715 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:26:32.715 -08 000000072 INF: ===================Camera #0 Frame #67===================
17-02-28 20:26:32.719 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:26:32.719 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:26:32.719 -08 000000085 INF: ===================Camera #2 Frame #67===================
17-02-28 20:26:32.730 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:32.866 -08 000000091 INF: Y Motor: Unshifted Position: 4678833
17-02-28 20:26:32.885 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:26:32.885 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:26:32.885 -08 000000072 INF: ===================Camera #0 Frame #73===================
17-02-28 20:26:32.890 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:26:32.890 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:26:32.890 -08 000000085 INF: ===================Camera #2 Frame #74===================
17-02-28 20:26:32.916 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.043 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.055 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:26:33.055 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:26:33.055 -08 000000072 INF: ===================Camera #0 Frame #80===================
17-02-28 20:26:33.064 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:26:33.064 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:26:33.064 -08 000000085 INF: ===================Camera #2 Frame #80===================
17-02-28 20:26:33.178 -08 000000091 INF: Y Motor: Unshifted Position: 4474725
17-02-28 20:26:33.228 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.228 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:26:33.228 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:26:33.228 -08 000000072 INF: ===================Camera #0 Frame #86===================
17-02-28 20:26:33.235 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:26:33.235 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:26:33.235 -08 000000085 INF: ===================Camera #2 Frame #86===================
17-02-28 20:26:33.357 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.397 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:26:33.397 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:26:33.397 -08 000000072 INF: ===================Camera #0 Frame #92===================
17-02-28 20:26:33.404 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:26:33.404 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:26:33.404 -08 000000085 INF: ===================Camera #2 Frame #93===================
17-02-28 20:26:33.491 -08 000000091 INF: Y Motor: Unshifted Position: 4272362
17-02-28 20:26:33.541 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.566 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:26:33.566 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:26:33.566 -08 000000072 INF: ===================Camera #0 Frame #99===================
17-02-28 20:26:33.577 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:26:33.577 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:26:33.577 -08 000000085 INF: ===================Camera #2 Frame #99===================
17-02-28 20:26:33.665 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.738 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:26:33.738 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:26:33.738 -08 000000072 INF: ===================Camera #0 Frame #105===================
17-02-28 20:26:33.747 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:26:33.747 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:26:33.747 -08 000000085 INF: ===================Camera #2 Frame #105===================
17-02-28 20:26:33.802 -08 000000091 INF: Y Motor: Unshifted Position: 4068040
17-02-28 20:26:33.852 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:33.907 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:26:33.907 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:26:33.907 -08 000000072 INF: ===================Camera #0 Frame #111===================
17-02-28 20:26:33.917 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:26:33.917 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:26:33.917 -08 000000085 INF: ===================Camera #2 Frame #111===================
17-02-28 20:26:33.979 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.076 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:26:34.076 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:26:34.076 -08 000000072 INF: ===================Camera #0 Frame #117===================
17-02-28 20:26:34.087 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:26:34.087 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:26:34.087 -08 000000085 INF: ===================Camera #2 Frame #118===================
17-02-28 20:26:34.115 -08 000000091 INF: Y Motor: Unshifted Position: 3866539
17-02-28 20:26:34.165 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.245 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:26:34.245 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:26:34.245 -08 000000072 INF: ===================Camera #0 Frame #124===================
17-02-28 20:26:34.260 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:26:34.260 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:26:34.260 -08 000000085 INF: ===================Camera #2 Frame #124===================
17-02-28 20:26:34.291 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.417 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:26:34.417 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:26:34.417 -08 000000072 INF: ===================Camera #0 Frame #130===================
17-02-28 20:26:34.427 -08 000000091 INF: Y Motor: Unshifted Position: 3663519
17-02-28 20:26:34.430 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:26:34.430 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:26:34.430 -08 000000085 INF: ===================Camera #2 Frame #130===================
17-02-28 20:26:34.477 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.586 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:26:34.586 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:26:34.586 -08 000000072 INF: ===================Camera #0 Frame #136===================
17-02-28 20:26:34.600 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:26:34.600 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:26:34.600 -08 000000085 INF: ===================Camera #2 Frame #137===================
17-02-28 20:26:34.603 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.738 -08 000000091 INF: Y Motor: Unshifted Position: 3459425
17-02-28 20:26:34.755 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:26:34.755 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:26:34.755 -08 000000072 INF: ===================Camera #0 Frame #142===================
17-02-28 20:26:34.774 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:26:34.774 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:26:34.774 -08 000000085 INF: ===================Camera #2 Frame #143===================
17-02-28 20:26:34.788 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.915 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:34.925 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:26:34.925 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:26:34.925 -08 000000072 INF: ===================Camera #0 Frame #149===================
17-02-28 20:26:34.945 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:26:34.945 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:26:34.946 -08 000000085 INF: ===================Camera #2 Frame #149===================
17-02-28 20:26:35.051 -08 000000091 INF: Y Motor: Unshifted Position: 3257707
17-02-28 20:26:35.098 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:26:35.098 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:26:35.098 -08 000000072 INF: ===================Camera #0 Frame #155===================
17-02-28 20:26:35.101 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:35.117 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:26:35.117 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:26:35.117 -08 000000085 INF: ===================Camera #2 Frame #156===================
17-02-28 20:26:35.225 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:35.268 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:26:35.268 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:26:35.269 -08 000000072 INF: ===================Camera #0 Frame #161===================
17-02-28 20:26:35.291 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:26:35.291 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:26:35.291 -08 000000085 INF: ===================Camera #2 Frame #162===================
17-02-28 20:26:35.364 -08 000000091 INF: Y Motor: Unshifted Position: 3053614
17-02-28 20:26:35.414 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:35.439 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:26:35.439 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:26:35.439 -08 000000072 INF: ===================Camera #0 Frame #167===================
17-02-28 20:26:35.462 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:26:35.462 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:26:35.462 -08 000000085 INF: ===================Camera #2 Frame #168===================
17-02-28 20:26:35.539 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:35.609 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:26:35.609 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:26:35.609 -08 000000072 INF: ===================Camera #0 Frame #174===================
17-02-28 20:26:35.633 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:26:35.633 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:26:35.633 -08 000000085 INF: ===================Camera #2 Frame #175===================
17-02-28 20:26:35.675 -08 000000091 INF: Y Motor: Unshifted Position: 2851903
17-02-28 20:26:35.725 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:35.782 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:26:35.782 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:26:35.782 -08 000000072 INF: ===================Camera #0 Frame #180===================
17-02-28 20:26:35.807 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:26:35.807 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:26:35.807 -08 000000085 INF: ===================Camera #2 Frame #181===================
17-02-28 20:26:35.849 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:35.952 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:26:35.952 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:26:35.952 -08 000000072 INF: ===================Camera #0 Frame #186===================
17-02-28 20:26:35.978 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:26:35.978 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:26:35.978 -08 000000085 INF: ===================Camera #2 Frame #187===================
17-02-28 20:26:35.986 -08 000000091 INF: Y Motor: Unshifted Position: 2647800
17-02-28 20:26:36.036 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.120 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:26:36.120 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:26:36.120 -08 000000072 INF: ===================Camera #0 Frame #193===================
17-02-28 20:26:36.148 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:26:36.148 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:26:36.148 -08 000000085 INF: ===================Camera #2 Frame #194===================
17-02-28 20:26:36.163 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.291 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:26:36.291 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:26:36.291 -08 000000072 INF: ===================Camera #0 Frame #199===================
17-02-28 20:26:36.299 -08 000000091 INF: Y Motor: Unshifted Position: 2446739
17-02-28 20:26:36.323 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:26:36.323 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:26:36.323 -08 000000085 INF: ===================Camera #2 Frame #200===================
17-02-28 20:26:36.349 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.462 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:26:36.462 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:26:36.462 -08 000000072 INF: ===================Camera #0 Frame #205===================
17-02-28 20:26:36.476 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.494 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:26:36.494 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:26:36.494 -08 000000085 INF: ===================Camera #2 Frame #206===================
17-02-28 20:26:36.612 -08 000000091 INF: Y Motor: Unshifted Position: 2242425
17-02-28 20:26:36.632 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:26:36.632 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:26:36.633 -08 000000072 INF: ===================Camera #0 Frame #211===================
17-02-28 20:26:36.662 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.665 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:26:36.665 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:26:36.665 -08 000000085 INF: ===================Camera #2 Frame #213===================
17-02-28 20:26:36.786 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.803 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:26:36.803 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:26:36.803 -08 000000072 INF: ===================Camera #0 Frame #218===================
17-02-28 20:26:36.839 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:26:36.839 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:26:36.839 -08 000000085 INF: ===================Camera #2 Frame #219===================
17-02-28 20:26:36.923 -08 000000091 INF: Y Motor: Unshifted Position: 2038972
17-02-28 20:26:36.973 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:36.976 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:26:36.976 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:26:36.976 -08 000000072 INF: ===================Camera #0 Frame #224===================
17-02-28 20:26:37.010 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:26:37.010 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:26:37.010 -08 000000085 INF: ===================Camera #2 Frame #225===================
17-02-28 20:26:37.100 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:37.146 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:26:37.146 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:26:37.146 -08 000000072 INF: ===================Camera #0 Frame #230===================
17-02-28 20:26:37.181 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:26:37.181 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:26:37.181 -08 000000085 INF: ===================Camera #2 Frame #232===================
17-02-28 20:26:37.235 -08 000000091 INF: Y Motor: Unshifted Position: 1836825
17-02-28 20:26:37.285 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:37.316 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:26:37.316 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:26:37.316 -08 000000072 INF: ===================Camera #0 Frame #237===================
17-02-28 20:26:37.355 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:26:37.355 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:26:37.355 -08 000000085 INF: ===================Camera #2 Frame #238===================
17-02-28 20:26:37.412 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:37.489 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:26:37.489 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:26:37.489 -08 000000072 INF: ===================Camera #0 Frame #243===================
17-02-28 20:26:37.526 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:26:37.526 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:26:37.526 -08 000000085 INF: ===================Camera #2 Frame #244===================
17-02-28 20:26:37.548 -08 000000091 INF: Y Motor: Unshifted Position: 1634451
17-02-28 20:26:37.598 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:37.659 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:26:37.659 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:26:37.659 -08 000000072 INF: ===================Camera #0 Frame #249===================
17-02-28 20:26:37.697 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:26:37.697 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:26:37.697 -08 000000085 INF: ===================Camera #2 Frame #251===================
17-02-28 20:26:37.722 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:37.829 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:26:37.829 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:26:37.829 -08 000000072 INF: ===================Camera #0 Frame #255===================
17-02-28 20:26:37.861 -08 000000091 INF: Y Motor: Unshifted Position: 1432949
17-02-28 20:26:37.871 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:26:37.871 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:26:37.871 -08 000000085 INF: ===================Camera #2 Frame #257===================
17-02-28 20:26:37.911 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:37.999 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:26:37.999 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:26:37.999 -08 000000072 INF: ===================Camera #0 Frame #262===================
17-02-28 20:26:38.036 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:38.042 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:26:38.042 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:26:38.042 -08 000000085 INF: ===================Camera #2 Frame #263===================
17-02-28 20:26:38.171 -08 000000091 INF: Y Motor: Unshifted Position: 1229050
17-02-28 20:26:38.172 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:26:38.172 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:26:38.172 -08 000000072 INF: ===================Camera #0 Frame #268===================
17-02-28 20:26:38.213 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:26:38.213 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:26:38.213 -08 000000085 INF: ===================Camera #2 Frame #270===================
17-02-28 20:26:38.221 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:38.296 -08 000000034 INF: FPGA: Recv TDIYWAIT
17-02-28 20:26:38.296 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:38.298 -08 000000083 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:26:38.299 -08 000000102 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:26:38.299 -08 000000064 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:26:38.299 -08 000000102 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:26:38.299 -08 000000102 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:26:38.299 -08 000000102 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:26:38.299 -08 000000064 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:26:38.299 -08 000000102 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:26:38.299 -08 000000064 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:26:38.299 -08 000000064 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:26:38.302 -08 000000064 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:26:38.342 -08 000000072 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:38.342 -08 000000072 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:38.342 -08 000000072 INF: ===================Camera #0 Frame #272===================
17-02-28 20:26:38.348 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:38.355 -08 000000072 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:38.356 -08 000000072 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:38.485 -08 000000091 INF: Y Motor: Unshifted Position: 1025607
17-02-28 20:26:38.516 -08 000000072 INF: Camera #0 ReleaseBuffer
17-02-28 20:26:38.516 -08 000000085 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:38.516 -08 000000085 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:38.516 -08 000000085 INF: ===================Camera #2 Frame #272===================
17-02-28 20:26:38.516 -08 000000072 INF: ===================Camera TDI===================
17-02-28 20:26:38.522 -08 000000085 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:38.523 -08 000000085 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:38.535 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:38.551 -08 000000072 INF: ======================================
17-02-28 20:26:38.668 -08 000000089 INF: FPGA: Recv EX2MV
17-02-28 20:26:38.668 -08 000000102 INF: Excitation Filter 2: Moved 107 steps in 368.6939 ms
17-02-28 20:26:38.668 -08 000000102 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.8082 ms
17-02-28 20:26:38.668 -08 000000102 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.8866 ms
17-02-28 20:26:38.668 -08 000000102 INF: ======================================
17-02-28 20:26:38.670 -08 000000091 INF: Y Motor: Unshifted Position: 993305
17-02-28 20:26:38.670 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:38.670 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:38.724 -08 000000085 INF: Camera #2 ReleaseBuffer
17-02-28 20:26:38.724 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:26:38.730 -08 000000060 INF: FPGA: Recv EX1MV
17-02-28 20:26:38.730 -08 000000064 INF: Excitation Filter 1: Moved 107 steps in 430.5051 ms
17-02-28 20:26:38.730 -08 000000064 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 430.64 ms
17-02-28 20:26:38.730 -08 000000064 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 430.7141 ms
17-02-28 20:26:38.730 -08 000000064 INF: ======================================
17-02-28 20:26:38.731 -08 000000083 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:38.732 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:26:38.732 -08 000000091 INF: Y Motor: Moved to 14.9331 after 7861 ms
17-02-28 20:26:38.732 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:38.733 -08 000000083 INF: ======================================
17-02-28 20:26:38.759 -08 000000085 INF: ======================================
17-02-28 20:26:38.760 -08 000000036 INF: ===================Camera TDI===================
17-02-28 20:26:38.761 -08 000000036 INF: ======================================
17-02-28 20:26:38.797 -08 000000091 INF: Y Motor: Recv v 4097\r
17-02-28 20:26:38.797 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:38.797 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:38.859 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:26:38.859 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:38.859 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:38.921 -08 000000091 INF: Y Motor: Recv v 134217728\r
17-02-28 20:26:38.921 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:26:38.921 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:38.921 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:38.985 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:26:38.985 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:38.985 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:38.985 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:39.045 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:26:39.045 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:39.045 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:39.107 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:26:39.107 -08 000000091 INF: ======================================
17-02-28 20:26:39.108 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:39.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:39.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.110 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:26:39.167 -08 000000069 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:26:39.167 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:39.230 -08 000000102 INF: FPGA: Recv TDIYERD 1493306
17-02-28 20:26:39.230 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:26:39.292 -08 000000030 INF: FPGA: Recv ZADCR 20146
17-02-28 20:26:39.292 -08 000000042 INF: At scan end Y pos = 14.933 and Z pos = -0.077. Y moved -48.539 mm
17-02-28 20:26:39.292 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:26:39.354 -08 000000033 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:26:39.354 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:26:39.354 -08 000000042 INF: TDIScan finished after 11836.5214 ms
17-02-28 20:26:39.354 -08 000000042 INF: Image[0]: Y should trigger at 63.472 mm, 2nd row was at 64.381 mm (error = 0.909 mm)
17-02-28 20:26:39.354 -08 000000042 INF: Image[2]: Y should trigger at 63.472 mm, 2nd row was at 64.381 mm (error = 0.909 mm)
17-02-28 20:26:39.356 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.389 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.243 um
17-02-28 20:26:39.389 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.390 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:26:39.419 -08 000000030 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:26:39.419 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.420 -08 000000058 INF: ===================Dither Clean Up Command===================
17-02-28 20:26:39.420 -08 000000036 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:26:39.420 -08 000000064 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:26:39.420 -08 000000045 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:26:39.420 -08 000000064 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:39.420 -08 000000064 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:39.421 -08 000000045 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:26:39.421 -08 000000045 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:26:39.421 -08 000000059 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:39.421 -08 000000036 INF: ======================================
17-02-28 20:26:39.421 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:39.422 -08 000000059 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:26:39.424 -08 000000074 INF: ===================LFT:Extracting coords===================
17-02-28 20:26:39.450 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:39.451 -08 000000074 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:26:39.452 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.452 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.452 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.452 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.452 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:39.452 -08 000000083 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:39.452 -08 000000085 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:39.452 -08 000000102 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:39.481 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:39.481 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:26:39.481 -08 000000059 INF: FPGA: Xmit ZDACW 26275\n
17-02-28 20:26:39.481 -08 000000045 INF: ======================================
17-02-28 20:26:39.483 -08 000000064 INF: Y Motor: Recv ok\r
17-02-28 20:26:39.483 -08 000000064 INF: ======================================
17-02-28 20:26:39.528 -08 000000033 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:39.528 -08 000000083 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:39.528 -08 000000085 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:39.528 -08 000000102 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:39.543 -08 000000050 INF: FPGA: Recv ZDACW 
17-02-28 20:26:39.543 -08 000000059 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:26:39.543 -08 000000059 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:26:39.605 -08 000000036 INF: FPGA: Recv TDIBB
17-02-28 20:26:39.605 -08 000000059 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:39.606 -08 000000059 INF: ======================================
17-02-28 20:26:39.680 -08 000000033 INF: LFT found best fwhm score 2.038251 in 152 ms
17-02-28 20:26:39.680 -08 000000033 INF: LFT found good score at index 8133 with fwhm value 2.038251. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:1,B
17-02-28 20:26:39.680 -08 000000085 INF: LFT found best fwhm score 2.000314 in 152 ms
17-02-28 20:26:39.680 -08 000000085 INF: LFT found good score at index 7929 with fwhm value 2.000314. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:1,B
17-02-28 20:26:39.680 -08 000000102 INF: LFT found best fwhm score 2.00003 in 152 ms
17-02-28 20:26:39.680 -08 000000102 INF: LFT found good score at index 869 with fwhm value 2.00003. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:1,B
17-02-28 20:26:39.680 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.680 -08 000000085 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.680 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.681 -08 000000083 INF: LFT found best fwhm score 2.000132 in 152 ms
17-02-28 20:26:39.681 -08 000000083 INF: LFT found good score at index 5629 with fwhm value 2.000132. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:1,B
17-02-28 20:26:39.681 -08 000000033 INF: ======================================
17-02-28 20:26:39.681 -08 000000085 INF: ======================================
17-02-28 20:26:39.681 -08 000000083 INF: ===================LookupFocusTracking===================
17-02-28 20:26:39.681 -08 000000102 INF: ======================================
17-02-28 20:26:39.681 -08 000000083 INF: ======================================
17-02-28 20:26:39.682 -08 000000074 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:39.683 -08 000000074 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:1,B
17-02-28 20:26:39.683 -08 000000074 INF: ======================================
17-02-28 20:26:39.684 -08 000000058 INF: ======================================
17-02-28 20:26:39.685 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:26:39.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:26:39.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.686 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:26:39.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:26:39.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:26:39.687 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:26:39.688 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:26:39.688 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:26:39.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:26:39.688 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 68.62818 Y = 39.78827===================
17-02-28 20:26:39.711 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:26:39.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:39.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:26:39.712 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:39.712 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:26:39.713 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:26:39.713 -08 000000042 INF: Transformed XStagePosition from 69.73618 mm to 69.7103081662208 mm.
17-02-28 20:26:39.724 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.581382801408 mm.
17-02-28 20:26:39.724 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.381382801408 mm.
17-02-28 20:26:39.724 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4721328014079 mm.
17-02-28 20:26:39.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:26:39.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:39.749 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -100.2 um, section = A_1
17-02-28 20:26:39.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:39.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:39.788 -08 000000062 INF: ===================MoveEmissionFilters===================
17-02-28 20:26:39.790 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:26:39.791 -08 000000035 INF: ===================Move X,Y, Parallel===================
17-02-28 20:26:39.794 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:39.795 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:26:39.795 -08 000000072 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:26:39.795 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:39.797 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:26:39.797 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:39.798 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:39.803 -08 000000086 INF: ===================Move X Motor without settling===================
17-02-28 20:26:39.803 -08 000000086 INF: X Motor: Xmit PR VM\n
17-02-28 20:26:39.805 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:39.806 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:39.807 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:26:39.808 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:39.808 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":1,"Tile":2107,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF244","HCSMMF287","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.809 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:26:39.809 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:39.810 -08 000000029 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:39.810 -08 000000095 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:26:39.810 -08 000000089 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:26:39.810 -08 000000029 INF: Y Motor: Moving to 64.5814 mm @25.000 mm/sec, started at 14.9331 mm
17-02-28 20:26:39.810 -08 000000029 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:39.810 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:39.811 -08 000000095 INF: ======================================
17-02-28 20:26:39.812 -08 000000044 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:39.813 -08 000000044 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:39.813 -08 000000023 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:26:39.813 -08 000000095 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:26:39.813 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:39.814 -08 000000058 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:26:39.814 -08 000000058 INF: ======================================
17-02-28 20:26:39.814 -08 000000095 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:26:39.814 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:39.814 -08 000000095 INF: ======================================
17-02-28 20:26:39.815 -08 000000052 INF: ===================Camera Arm TDI===================
17-02-28 20:26:39.816 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:39.816 -08 000000058 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:26:39.816 -08 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:26:39.817 -08 000000058 INF: ======================================
17-02-28 20:26:39.817 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:39.817 -08 000000095 INF: ======================================
17-02-28 20:26:39.817 -08 000000102 INF: ======================================
17-02-28 20:26:39.818 -08 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:26:39.818 -08 000000076 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:26:39.818 -08 000000052 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:39.818 -08 000000078 INF: ======================================
17-02-28 20:26:39.819 -08 000000076 INF: ======================================
17-02-28 20:26:39.821 -08 000000066 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:39.822 -08 000000044 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:39.822 -08 000000066 INF: ======================================
17-02-28 20:26:39.826 -08 000000044 INF: ======================================
17-02-28 20:26:39.849 -08 000000023 INF: ======================================
17-02-28 20:26:39.851 -08 000000051 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:39.852 -08 000000051 INF: ======================================
17-02-28 20:26:39.854 -08 000000062 INF: ======================================
17-02-28 20:26:39.870 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:26:39.871 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:39.871 -08 000000089 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:26:39.872 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:26:39.872 -08 000000029 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:39.872 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:39.872 -08 000000086 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:26:39.872 -08 000000086 INF: X Motor: Xmit PR VI\n
17-02-28 20:26:39.928 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":1,"Tile":2102,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF191","HCSMMF256","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.934 -08 000000050 INF: FPGA: Recv TDIBB
17-02-28 20:26:39.934 -08 000000089 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:26:39.935 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":1,"Tile":2106,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF268","HCSMMF219","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.936 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:26:39.936 -08 000000086 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:26:39.936 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:39.936 -08 000000086 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:26:39.936 -08 000000086 INF: X Motor: Moving to 69.7103 mm @15.000 mm/sec, started at 68.6118 mm
17-02-28 20:26:39.936 -08 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:26:39.936 -08 000000086 INF: X Motor: Xmit MA 4387\n
17-02-28 20:26:39.936 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:39.937 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":1,"Tile":2105,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF224","HCSMMF197","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.938 -08 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:26:39.938 -08 000000089 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:26:39.938 -08 000000089 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:26:39.941 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":1,"Tile":2112,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF215","HCSMMF269","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.942 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":1,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF235","HCSMMF177","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.943 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":1,"Tile":2101,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF280","HCSMMF228","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.944 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":1,"Tile":2113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF251","HCSMMF281","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.944 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":1,"Tile":2104,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF198","HCSMMF180","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.945 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":1,"Tile":2103,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF204","HCSMMF255","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.946 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":1,"Tile":2110,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF271","HCSMMF231","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.946 -08 000000085 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":1,"Tile":2111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF211","HCSMMF285","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.947 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":1,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF250","HCSMMF190","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.948 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":1,"Tile":2118,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF258","HCSMMF240","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.948 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":1,"Tile":2114,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF262","HCSMMF245","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.949 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":1,"Tile":2115,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF254","HCSMMF263","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.950 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":1,"Tile":2116,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF208","HCSMMF176","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.951 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":1,"Tile":2119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF248","HCSMMF286","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.951 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":1,"Tile":2117,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF202","HCSMMF233","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.952 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":1,"Tile":2120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF185","HCSMMF241","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.953 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":1,"Tile":2123,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF192","HCSMMF199","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.954 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":1,"Tile":2121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF218","HCSMMF261","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.954 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":1,"Tile":2125,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF217","HCSMMF230","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.955 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":1,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF260","HCSMMF195","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.956 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":1,"Tile":2126,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF205","HCSMMF216","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.957 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":1,"Tile":2127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF259","HCSMMF277","HCSMMF214","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.958 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":1,"Tile":2122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF193","HCSMMF183","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.959 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":1,"Tile":2124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF239","HCSMMF181","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:39.967 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:39.974 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:26:39.996 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:39.996 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:39.998 -08 000000086 INF: X Motor: Recv MA 4387\r\n>
17-02-28 20:26:39.998 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:26:39.998 -08 000000029 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:39.998 -08 000000029 INF: Y Motor: Set target position to 5958138 encoder counts
17-02-28 20:26:39.998 -08 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:26:39.998 -08 000000029 INF: Y Motor: Xmit s r0xca 5958138\r
17-02-28 20:26:39.998 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:39.999 -08 000000086 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:26:40.001 -08 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:26:40.001 -08 000000089 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:26:40.001 -08 000000089 INF: Z Motor: Arming to move to -0.0602 mm
17-02-28 20:26:40.001 -08 000000089 INF: FPGA: Xmit ZYT 6438138 4\n
17-02-28 20:26:40.055 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:40.056 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:26:40.058 -08 000000076 INF: FPGA: Recv ZYT 
17-02-28 20:26:40.058 -08 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1493305 enc / 14.933 mm / ) = 6438138 enc / 64.381 mm
17-02-28 20:26:40.058 -08 000000089 INF: FPGA: Xmit ZARM 15789\n
17-02-28 20:26:40.060 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:26:40.060 -08 000000029 INF: Y Motor: Start the move command
17-02-28 20:26:40.060 -08 000000029 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:40.094 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:40.099 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:26:40.120 -08 000000085 INF: FPGA: Recv ZARM
17-02-28 20:26:40.120 -08 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0066 ms
17-02-28 20:26:40.120 -08 000000089 INF: Z Motor: ArmAbsStepped took 118.9581 ms
17-02-28 20:26:40.121 -08 000000089 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:40.122 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:26:40.122 -08 000000029 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:26:40.122 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:40.122 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:26:40.124 -08 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:26:40.125 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:26:40.128 -08 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:26:40.128 -08 000000089 INF: ===================TDI Scan Setup===================
17-02-28 20:26:40.130 -08 000000089 INF: ======================================
17-02-28 20:26:40.218 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:40.224 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:26:40.246 -08 000000029 INF: Y Motor: Unshifted Position: 1076096
17-02-28 20:26:40.296 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:40.334 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:40.339 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:26:40.420 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:40.425 -08 000000052 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:26:40.425 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:26:40.425 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:40.436 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:40.440 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:40.442 -08 000000052 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:40.559 -08 000000029 INF: Y Motor: Unshifted Position: 1783301
17-02-28 20:26:40.609 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:40.621 -08 000000086 INF: X Motor: Xmit PR ER\n
17-02-28 20:26:40.683 -08 000000086 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:26:40.683 -08 000000086 INF: X Motor: Moved to 69.7104 after 684 ms
17-02-28 20:26:40.683 -08 000000086 INF: ======================================
17-02-28 20:26:40.716 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:26:40.733 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:40.872 -08 000000029 INF: Y Motor: Unshifted Position: 2558329
17-02-28 20:26:40.922 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.040 -08 000000052 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:26:41.040 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:26:41.040 -08 000000052 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:41.046 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.056 -08 000000052 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:26:41.058 -08 000000052 INF: ===================Camera Arm TDI===================
17-02-28 20:26:41.060 -08 000000052 INF: ======================================
17-02-28 20:26:41.061 -08 000000072 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:26:41.063 -08 000000072 INF: ======================================
17-02-28 20:26:41.183 -08 000000029 INF: Y Motor: Unshifted Position: 3344097
17-02-28 20:26:41.233 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.357 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.496 -08 000000029 INF: Y Motor: Unshifted Position: 4121666
17-02-28 20:26:41.546 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.672 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.808 -08 000000029 INF: Y Motor: Unshifted Position: 4902448
17-02-28 20:26:41.858 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:41.983 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:42.119 -08 000000029 INF: Y Motor: Unshifted Position: 5684302
17-02-28 20:26:42.169 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:42.293 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:42.431 -08 000000029 INF: Y Motor: Unshifted Position: 5958140
17-02-28 20:26:42.431 -08 000000029 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:42.431 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:42.493 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:26:42.493 -08 000000029 INF: Y Motor: Moved to 64.5814 after 2370 ms
17-02-28 20:26:42.493 -08 000000029 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:42.555 -08 000000029 INF: Y Motor: Recv v 4096\r
17-02-28 20:26:42.555 -08 000000029 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:42.555 -08 000000029 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:42.617 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:26:42.617 -08 000000029 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:42.617 -08 000000029 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:42.679 -08 000000029 INF: Y Motor: Recv v 402653184\r
17-02-28 20:26:42.679 -08 000000029 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:26:42.679 -08 000000029 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:42.679 -08 000000029 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:42.742 -08 000000029 INF: Y Motor: Recv v 0\r
17-02-28 20:26:42.742 -08 000000029 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:42.742 -08 000000029 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:42.742 -08 000000029 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:42.806 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:26:42.806 -08 000000029 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:42.806 -08 000000029 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:42.868 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:26:42.868 -08 000000029 INF: ======================================
17-02-28 20:26:42.869 -08 000000035 INF: ===================Move X,Y===================
17-02-28 20:26:42.870 -08 000000035 INF: ======================================
17-02-28 20:26:42.871 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:42.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:42.872 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:26:42.872 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:26:42.931 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:42.931 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:26:42.990 -08 000000050 INF: FPGA: Recv ZFREQCL
17-02-28 20:26:42.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:26:42.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:42.991 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:43.052 -08 000000034 INF: FPGA: Recv TDIYERD 6458139
17-02-28 20:26:43.052 -08 000000042 INF: Before scan, Y encoder from FPGA = 6458139 counts (64.581 mm)
17-02-28 20:26:43.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:43.053 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:43.054 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:26:43.054 -08 000000083 INF: ===================Set YMotor gains for scans===================
17-02-28 20:26:43.054 -08 000000083 INF: ======================================
17-02-28 20:26:43.055 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:43.055 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:26:43.055 -08 000000077 INF: FPGA: Xmit TDIYPOS 6347213\n
17-02-28 20:26:43.114 -08 000000030 INF: FPGA: Recv TDIYPOS
17-02-28 20:26:43.114 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:43.116 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:26:43.116 -08 000000077 INF: FPGA: Xmit TDIYARM3 139264 6438138 1 1\n
17-02-28 20:26:43.176 -08 000000086 INF: FPGA: Recv TDIYARM3
17-02-28 20:26:43.176 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:26:43.177 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:26:43.178 -08 000000077 INF: ======================================
17-02-28 20:26:43.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:43.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:43.181 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:43.181 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:43.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:43.182 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:26:43.182 -08 000000099 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:26:43.183 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:26:43.183 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:26:43.183 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:26:43.183 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:26:43.183 -08 000000099 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:26:43.183 -08 000000099 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:26:43.183 -08 000000099 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:26:43.187 -08 000000099 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:26:43.615 -08 000000072 INF: FPGA: Recv EX2MV
17-02-28 20:26:43.615 -08 000000072 INF: FPGA: Recv EX1MV
17-02-28 20:26:43.615 -08 000000099 INF: Excitation Filter 1: Moved -107 steps in 431.9687 ms
17-02-28 20:26:43.615 -08 000000099 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 432.1595 ms
17-02-28 20:26:43.615 -08 000000099 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 432.2455 ms
17-02-28 20:26:43.615 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 432.2576 ms
17-02-28 20:26:43.615 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 432.6625 ms
17-02-28 20:26:43.615 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 432.7385 ms
17-02-28 20:26:43.615 -08 000000099 INF: ======================================
17-02-28 20:26:43.616 -08 000000039 INF: ======================================
17-02-28 20:26:43.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:43.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:43.619 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:26:43.619 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:43.619 -08 000000085 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:43.619 -08 000000087 INF: ===================FPGA Z Wait===================
17-02-28 20:26:43.619 -08 000000085 INF: Y Motor: Moving to 14.9330 mm @6.500 mm/sec, started at 64.5814 mm
17-02-28 20:26:43.619 -08 000000087 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:26:43.619 -08 000000085 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:43.619 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:43.619 -08 000000051 INF: ===================Camera TDI, Parallel===================
17-02-28 20:26:43.619 -08 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:26:43.620 -08 000000045 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:26:43.620 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:26:43.620 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:26:43.622 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:43.622 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:43.622 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:43.622 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:43.679 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:43.679 -08 000000085 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:43.679 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:43.741 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:43.741 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:43.772 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:43.772 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:43.772 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:43.772 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:43.803 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:26:43.803 -08 000000085 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:43.803 -08 000000085 INF: Y Motor: Set target position to 993305 encoder counts
17-02-28 20:26:43.803 -08 000000085 INF: Y Motor: Xmit s r0xca 993305\r
17-02-28 20:26:43.865 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:43.865 -08 000000085 INF: Y Motor: Start the move command
17-02-28 20:26:43.865 -08 000000085 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:43.922 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:43.922 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:43.922 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:43.922 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:43.927 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:43.927 -08 000000085 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:26:43.927 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:43.988 -08 000000047 INF: FPGA: Recv ZWAIT 
17-02-28 20:26:43.988 -08 000000087 INF: ======================================
17-02-28 20:26:44.055 -08 000000085 INF: Y Motor: Unshifted Position: 5896290
17-02-28 20:26:44.072 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:44.072 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:44.072 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:44.072 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:44.072 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:26:44.072 -08 000000089 INF: ===================Camera #0 Frame #5===================
17-02-28 20:26:44.105 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:44.228 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:44.239 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:26:44.239 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:26:44.239 -08 000000064 INF: ===================Camera #2 Frame #11===================
17-02-28 20:26:44.245 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:26:44.245 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:26:44.245 -08 000000089 INF: ===================Camera #0 Frame #11===================
17-02-28 20:26:44.366 -08 000000085 INF: Y Motor: Unshifted Position: 5693482
17-02-28 20:26:44.408 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:26:44.408 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:26:44.408 -08 000000064 INF: ===================Camera #2 Frame #17===================
17-02-28 20:26:44.413 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:26:44.413 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:26:44.413 -08 000000089 INF: ===================Camera #0 Frame #17===================
17-02-28 20:26:44.416 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:44.540 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:44.586 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:26:44.586 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:26:44.586 -08 000000064 INF: ===================Camera #2 Frame #24===================
17-02-28 20:26:44.589 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:26:44.589 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:26:44.589 -08 000000089 INF: ===================Camera #0 Frame #24===================
17-02-28 20:26:44.676 -08 000000085 INF: Y Motor: Unshifted Position: 5489823
17-02-28 20:26:44.726 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:44.768 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:26:44.768 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:26:44.768 -08 000000064 INF: ===================Camera #2 Frame #30===================
17-02-28 20:26:44.769 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:26:44.769 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:26:44.769 -08 000000089 INF: ===================Camera #0 Frame #30===================
17-02-28 20:26:44.853 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:44.938 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:26:44.938 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:26:44.938 -08 000000064 INF: ===================Camera #2 Frame #36===================
17-02-28 20:26:44.946 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:26:44.946 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:26:44.946 -08 000000089 INF: ===================Camera #0 Frame #37===================
17-02-28 20:26:44.989 -08 000000085 INF: Y Motor: Unshifted Position: 5286374
17-02-28 20:26:45.039 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:45.116 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:26:45.116 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:26:45.116 -08 000000064 INF: ===================Camera #2 Frame #43===================
17-02-28 20:26:45.128 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:26:45.128 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:26:45.128 -08 000000089 INF: ===================Camera #0 Frame #43===================
17-02-28 20:26:45.163 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:45.297 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:26:45.297 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:26:45.297 -08 000000089 INF: ===================Camera #0 Frame #50===================
17-02-28 20:26:45.299 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:26:45.299 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:26:45.299 -08 000000064 INF: ===================Camera #2 Frame #50===================
17-02-28 20:26:45.302 -08 000000085 INF: Y Motor: Unshifted Position: 5077499
17-02-28 20:26:45.352 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:45.477 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:45.478 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:26:45.478 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:26:45.478 -08 000000089 INF: ===================Camera #0 Frame #56===================
17-02-28 20:26:45.480 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:26:45.480 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:26:45.480 -08 000000064 INF: ===================Camera #2 Frame #56===================
17-02-28 20:26:45.613 -08 000000085 INF: Y Motor: Unshifted Position: 4880551
17-02-28 20:26:45.655 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:26:45.655 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:26:45.655 -08 000000089 INF: ===================Camera #0 Frame #63===================
17-02-28 20:26:45.658 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:26:45.658 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:26:45.658 -08 000000064 INF: ===================Camera #2 Frame #63===================
17-02-28 20:26:45.663 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:45.787 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:45.836 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:26:45.836 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:26:45.836 -08 000000089 INF: ===================Camera #0 Frame #70===================
17-02-28 20:26:45.838 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:26:45.838 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:26:45.838 -08 000000064 INF: ===================Camera #2 Frame #70===================
17-02-28 20:26:45.927 -08 000000085 INF: Y Motor: Unshifted Position: 4678835
17-02-28 20:26:45.977 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:46.017 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:26:46.017 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:26:46.017 -08 000000089 INF: ===================Camera #0 Frame #76===================
17-02-28 20:26:46.020 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:26:46.020 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:26:46.020 -08 000000064 INF: ===================Camera #2 Frame #76===================
17-02-28 20:26:46.100 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:46.185 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:26:46.185 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:26:46.185 -08 000000089 INF: ===================Camera #0 Frame #82===================
17-02-28 20:26:46.198 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:26:46.198 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:26:46.198 -08 000000064 INF: ===================Camera #2 Frame #83===================
17-02-28 20:26:46.236 -08 000000085 INF: Y Motor: Unshifted Position: 4475374
17-02-28 20:26:46.286 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:46.354 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:26:46.354 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:26:46.354 -08 000000089 INF: ===================Camera #0 Frame #89===================
17-02-28 20:26:46.371 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:26:46.371 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:26:46.371 -08 000000064 INF: ===================Camera #2 Frame #89===================
17-02-28 20:26:46.411 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:46.525 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:26:46.525 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:26:46.525 -08 000000089 INF: ===================Camera #0 Frame #95===================
17-02-28 20:26:46.540 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:26:46.540 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:26:46.540 -08 000000064 INF: ===================Camera #2 Frame #95===================
17-02-28 20:26:46.550 -08 000000085 INF: Y Motor: Unshifted Position: 4271705
17-02-28 20:26:46.600 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:46.694 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:26:46.694 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:26:46.694 -08 000000089 INF: ===================Camera #0 Frame #101===================
17-02-28 20:26:46.711 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:26:46.711 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:26:46.711 -08 000000064 INF: ===================Camera #2 Frame #102===================
17-02-28 20:26:46.724 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:46.863 -08 000000085 INF: Y Motor: Unshifted Position: 4070206
17-02-28 20:26:46.863 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:26:46.863 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:26:46.863 -08 000000089 INF: ===================Camera #0 Frame #107===================
17-02-28 20:26:46.884 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:26:46.884 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:26:46.884 -08 000000064 INF: ===================Camera #2 Frame #108===================
17-02-28 20:26:46.913 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.032 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:26:47.032 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:26:47.032 -08 000000089 INF: ===================Camera #0 Frame #114===================
17-02-28 20:26:47.039 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.053 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:26:47.053 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:26:47.053 -08 000000064 INF: ===================Camera #2 Frame #114===================
17-02-28 20:26:47.175 -08 000000085 INF: Y Motor: Unshifted Position: 3866539
17-02-28 20:26:47.206 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:26:47.206 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:26:47.206 -08 000000089 INF: ===================Camera #0 Frame #120===================
17-02-28 20:26:47.222 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:26:47.222 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:26:47.222 -08 000000064 INF: ===================Camera #2 Frame #121===================
17-02-28 20:26:47.225 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.348 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.376 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:26:47.376 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:26:47.376 -08 000000089 INF: ===================Camera #0 Frame #126===================
17-02-28 20:26:47.394 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:26:47.394 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:26:47.394 -08 000000064 INF: ===================Camera #2 Frame #127===================
17-02-28 20:26:47.486 -08 000000085 INF: Y Motor: Unshifted Position: 3662435
17-02-28 20:26:47.536 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.546 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:26:47.546 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:26:47.546 -08 000000089 INF: ===================Camera #0 Frame #132===================
17-02-28 20:26:47.563 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:26:47.563 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:26:47.563 -08 000000064 INF: ===================Camera #2 Frame #133===================
17-02-28 20:26:47.660 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.716 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:26:47.716 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:26:47.716 -08 000000089 INF: ===================Camera #0 Frame #139===================
17-02-28 20:26:47.732 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:26:47.732 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:26:47.732 -08 000000064 INF: ===================Camera #2 Frame #139===================
17-02-28 20:26:47.797 -08 000000085 INF: Y Motor: Unshifted Position: 3460726
17-02-28 20:26:47.847 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:47.891 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:26:47.891 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:26:47.891 -08 000000089 INF: ===================Camera #0 Frame #145===================
17-02-28 20:26:47.901 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:26:47.901 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:26:47.901 -08 000000064 INF: ===================Camera #2 Frame #146===================
17-02-28 20:26:47.971 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.061 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:26:48.061 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:26:48.061 -08 000000089 INF: ===================Camera #0 Frame #151===================
17-02-28 20:26:48.073 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:26:48.073 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:26:48.073 -08 000000064 INF: ===================Camera #2 Frame #152===================
17-02-28 20:26:48.110 -08 000000085 INF: Y Motor: Unshifted Position: 3257276
17-02-28 20:26:48.160 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.231 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:26:48.231 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:26:48.231 -08 000000089 INF: ===================Camera #0 Frame #158===================
17-02-28 20:26:48.242 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:26:48.242 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:26:48.242 -08 000000064 INF: ===================Camera #2 Frame #158===================
17-02-28 20:26:48.284 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.406 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:26:48.406 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:26:48.406 -08 000000089 INF: ===================Camera #0 Frame #164===================
17-02-28 20:26:48.411 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:26:48.411 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:26:48.411 -08 000000064 INF: ===================Camera #2 Frame #164===================
17-02-28 20:26:48.423 -08 000000085 INF: Y Motor: Unshifted Position: 3055564
17-02-28 20:26:48.473 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.577 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:26:48.577 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:26:48.577 -08 000000089 INF: ===================Camera #0 Frame #170===================
17-02-28 20:26:48.580 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:26:48.580 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:26:48.580 -08 000000064 INF: ===================Camera #2 Frame #171===================
17-02-28 20:26:48.597 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.735 -08 000000085 INF: Y Motor: Unshifted Position: 2852116
17-02-28 20:26:48.747 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:26:48.747 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:26:48.747 -08 000000089 INF: ===================Camera #0 Frame #177===================
17-02-28 20:26:48.752 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:26:48.752 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:26:48.752 -08 000000064 INF: ===================Camera #2 Frame #177===================
17-02-28 20:26:48.785 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.907 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:48.920 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:26:48.920 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:26:48.920 -08 000000089 INF: ===================Camera #0 Frame #183===================
17-02-28 20:26:48.921 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:26:48.921 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:26:48.921 -08 000000064 INF: ===================Camera #2 Frame #183===================
17-02-28 20:26:49.046 -08 000000085 INF: Y Motor: Unshifted Position: 2648451
17-02-28 20:26:49.090 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:26:49.090 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:26:49.090 -08 000000064 INF: ===================Camera #2 Frame #189===================
17-02-28 20:26:49.092 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:26:49.092 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:26:49.092 -08 000000089 INF: ===================Camera #0 Frame #189===================
17-02-28 20:26:49.096 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:49.220 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:49.259 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:26:49.259 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:26:49.259 -08 000000064 INF: ===================Camera #2 Frame #196===================
17-02-28 20:26:49.260 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:26:49.260 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:26:49.260 -08 000000089 INF: ===================Camera #0 Frame #196===================
17-02-28 20:26:49.359 -08 000000085 INF: Y Motor: Unshifted Position: 2446956
17-02-28 20:26:49.409 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:49.431 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:26:49.431 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:26:49.431 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:26:49.431 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:26:49.431 -08 000000064 INF: ===================Camera #2 Frame #202===================
17-02-28 20:26:49.431 -08 000000089 INF: ===================Camera #0 Frame #202===================
17-02-28 20:26:49.531 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:49.600 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:26:49.600 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:26:49.600 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:26:49.600 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:26:49.600 -08 000000064 INF: ===================Camera #2 Frame #208===================
17-02-28 20:26:49.600 -08 000000089 INF: ===================Camera #0 Frame #208===================
17-02-28 20:26:49.670 -08 000000085 INF: Y Motor: Unshifted Position: 2242639
17-02-28 20:26:49.720 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:49.769 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:26:49.769 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:26:49.769 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:26:49.769 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:26:49.769 -08 000000089 INF: ===================Camera #0 Frame #214===================
17-02-28 20:26:49.769 -08 000000064 INF: ===================Camera #2 Frame #214===================
17-02-28 20:26:49.844 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:49.938 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:26:49.938 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:26:49.938 -08 000000064 INF: ===================Camera #2 Frame #221===================
17-02-28 20:26:49.939 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:26:49.939 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:26:49.939 -08 000000089 INF: ===================Camera #0 Frame #221===================
17-02-28 20:26:49.980 -08 000000085 INF: Y Motor: Unshifted Position: 2041142
17-02-28 20:26:50.030 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:50.110 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:26:50.110 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:26:50.110 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:26:50.110 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:26:50.110 -08 000000089 INF: ===================Camera #0 Frame #227===================
17-02-28 20:26:50.110 -08 000000064 INF: ===================Camera #2 Frame #227===================
17-02-28 20:26:50.155 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:50.278 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:26:50.278 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:26:50.278 -08 000000089 INF: ===================Camera #0 Frame #233===================
17-02-28 20:26:50.279 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:26:50.279 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:26:50.279 -08 000000064 INF: ===================Camera #2 Frame #233===================
17-02-28 20:26:50.294 -08 000000085 INF: Y Motor: Unshifted Position: 1836821
17-02-28 20:26:50.344 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:50.446 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:26:50.446 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:26:50.446 -08 000000089 INF: ===================Camera #0 Frame #239===================
17-02-28 20:26:50.448 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:26:50.448 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:26:50.448 -08 000000064 INF: ===================Camera #2 Frame #239===================
17-02-28 20:26:50.467 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:50.606 -08 000000085 INF: Y Motor: Unshifted Position: 1634019
17-02-28 20:26:50.614 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:26:50.614 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:26:50.614 -08 000000089 INF: ===================Camera #0 Frame #245===================
17-02-28 20:26:50.617 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:26:50.617 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:26:50.617 -08 000000064 INF: ===================Camera #2 Frame #246===================
17-02-28 20:26:50.656 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:50.780 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:50.784 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:26:50.784 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:26:50.784 -08 000000089 INF: ===================Camera #0 Frame #252===================
17-02-28 20:26:50.789 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:26:50.789 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:26:50.789 -08 000000064 INF: ===================Camera #2 Frame #252===================
17-02-28 20:26:50.916 -08 000000085 INF: Y Motor: Unshifted Position: 1432301
17-02-28 20:26:50.957 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:26:50.957 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:26:50.957 -08 000000089 INF: ===================Camera #0 Frame #258===================
17-02-28 20:26:50.958 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:26:50.958 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:26:50.958 -08 000000064 INF: ===================Camera #2 Frame #258===================
17-02-28 20:26:50.966 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:51.091 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:51.128 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:26:51.128 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:26:51.128 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:26:51.128 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:26:51.128 -08 000000089 INF: ===================Camera #0 Frame #264===================
17-02-28 20:26:51.128 -08 000000064 INF: ===================Camera #2 Frame #264===================
17-02-28 20:26:51.230 -08 000000085 INF: Y Motor: Unshifted Position: 1227964
17-02-28 20:26:51.280 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:51.297 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:26:51.297 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:26:51.297 -08 000000064 INF: ===================Camera #2 Frame #271===================
17-02-28 20:26:51.298 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:26:51.298 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:26:51.298 -08 000000089 INF: ===================Camera #0 Frame #271===================
17-02-28 20:26:51.352 -08 000000058 INF: FPGA: Recv TDIYWAIT
17-02-28 20:26:51.353 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:51.354 -08 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:26:51.355 -08 000000077 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:26:51.355 -08 000000037 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:26:51.355 -08 000000077 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:26:51.355 -08 000000077 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:26:51.355 -08 000000077 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:26:51.355 -08 000000077 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:26:51.355 -08 000000037 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:26:51.355 -08 000000037 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:26:51.355 -08 000000037 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:26:51.358 -08 000000037 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:26:51.406 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:51.470 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:51.470 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:51.470 -08 000000064 INF: ===================Camera #2 Frame #272===================
17-02-28 20:26:51.472 -08 000000089 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:26:51.472 -08 000000089 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:26:51.472 -08 000000089 INF: ===================Camera #0 Frame #272===================
17-02-28 20:26:51.473 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:51.474 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:51.476 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:26:51.476 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:26:51.542 -08 000000085 INF: Y Motor: Unshifted Position: 1025175
17-02-28 20:26:51.592 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:51.653 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:26:51.653 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:26:51.684 -08 000000064 INF: ======================================
17-02-28 20:26:51.726 -08 000000029 INF: FPGA: Recv EX1MV
17-02-28 20:26:51.726 -08 000000029 INF: FPGA: Recv EX2MV
17-02-28 20:26:51.726 -08 000000077 INF: Excitation Filter 1: Moved 107 steps in 370.7467 ms
17-02-28 20:26:51.726 -08 000000077 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.8585 ms
17-02-28 20:26:51.726 -08 000000037 INF: Excitation Filter 2: Moved 107 steps in 370.5867 ms
17-02-28 20:26:51.726 -08 000000037 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.8224 ms
17-02-28 20:26:51.726 -08 000000037 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.9334 ms
17-02-28 20:26:51.726 -08 000000077 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.9471 ms
17-02-28 20:26:51.726 -08 000000037 INF: ======================================
17-02-28 20:26:51.727 -08 000000077 INF: ======================================
17-02-28 20:26:51.728 -08 000000085 INF: Y Motor: Unshifted Position: 993306
17-02-28 20:26:51.728 -08 000000085 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:51.728 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:51.728 -08 000000045 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:51.729 -08 000000045 INF: ======================================
17-02-28 20:26:51.784 -08 000000089 INF: Camera #0 ReleaseBuffer
17-02-28 20:26:51.784 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:26:51.790 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:26:51.790 -08 000000085 INF: Y Motor: Moved to 14.9331 after 7862 ms
17-02-28 20:26:51.790 -08 000000085 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:51.816 -08 000000089 INF: ======================================
17-02-28 20:26:51.818 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:26:51.819 -08 000000051 INF: ======================================
17-02-28 20:26:51.852 -08 000000085 INF: Y Motor: Recv v 4097\r
17-02-28 20:26:51.852 -08 000000085 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:51.852 -08 000000085 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:51.918 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:26:51.918 -08 000000085 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:51.918 -08 000000085 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:51.977 -08 000000085 INF: Y Motor: Recv v 134217728\r
17-02-28 20:26:51.977 -08 000000085 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:26:51.977 -08 000000085 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:51.977 -08 000000085 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:52.042 -08 000000085 INF: Y Motor: Recv v 0\r
17-02-28 20:26:52.042 -08 000000085 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:52.042 -08 000000085 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:52.042 -08 000000085 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:52.104 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:52.104 -08 000000085 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:52.104 -08 000000085 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:52.166 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:52.166 -08 000000085 INF: ======================================
17-02-28 20:26:52.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:52.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:26:52.169 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.169 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:26:52.226 -08 000000078 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:26:52.226 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:52.288 -08 000000098 INF: FPGA: Recv TDIYERD 1493306
17-02-28 20:26:52.288 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:26:52.350 -08 000000045 INF: FPGA: Recv ZADCR 20153
17-02-28 20:26:52.350 -08 000000042 INF: At scan end Y pos = 14.933 and Z pos = -0.077. Y moved -48.539 mm
17-02-28 20:26:52.350 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:26:52.412 -08 000000082 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:26:52.412 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:26:52.412 -08 000000042 INF: TDIScan finished after 12698.8712 ms
17-02-28 20:26:52.412 -08 000000042 INF: Image[0]: Y should trigger at 63.472 mm, 2nd row was at 64.381 mm (error = 0.909 mm)
17-02-28 20:26:52.412 -08 000000042 INF: Image[2]: Y should trigger at 63.472 mm, 2nd row was at 64.381 mm (error = 0.909 mm)
17-02-28 20:26:52.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.448 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.620 um
17-02-28 20:26:52.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.449 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:26:52.474 -08 000000083 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:26:52.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.475 -08 000000077 INF: ===================Dither Clean Up Command===================
17-02-28 20:26:52.475 -08 000000099 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:26:52.475 -08 000000085 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:26:52.475 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:26:52.476 -08 000000051 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:26:52.476 -08 000000099 INF: ======================================
17-02-28 20:26:52.476 -08 000000051 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:26:52.476 -08 000000085 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:52.476 -08 000000085 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:52.476 -08 000000050 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:52.476 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:52.477 -08 000000050 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:26:52.479 -08 000000039 INF: ===================LFT:Extracting coords===================
17-02-28 20:26:52.504 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:52.505 -08 000000039 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:26:52.506 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.506 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.506 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.506 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.506 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:52.506 -08 000000059 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:52.507 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:52.507 -08 000000102 INF: ===================Lookup Focus Tracking===================
17-02-28 20:26:52.540 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:52.540 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:26:52.540 -08 000000050 INF: FPGA: Xmit ZDACW 26275\n
17-02-28 20:26:52.540 -08 000000051 INF: ======================================
17-02-28 20:26:52.542 -08 000000085 INF: Y Motor: Recv ok\r
17-02-28 20:26:52.542 -08 000000085 INF: ======================================
17-02-28 20:26:52.581 -08 000000033 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:52.581 -08 000000059 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:52.581 -08 000000102 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:52.581 -08 000000082 INF: FC:B, C:3,L:1, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:26:52.600 -08 000000035 INF: FPGA: Recv ZDACW 
17-02-28 20:26:52.600 -08 000000050 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:26:52.601 -08 000000050 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:26:52.664 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:26:52.664 -08 000000050 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:26:52.665 -08 000000050 INF: ======================================
17-02-28 20:26:52.732 -08 000000033 INF: LFT found best fwhm score 2.003033 in 151 ms
17-02-28 20:26:52.732 -08 000000033 INF: LFT found good score at index 5861 with fwhm value 2.003033. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:1,B
17-02-28 20:26:52.732 -08 000000102 INF: LFT found best fwhm score 2.000252 in 151 ms
17-02-28 20:26:52.732 -08 000000102 INF: LFT found good score at index 6521 with fwhm value 2.000252. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:1,B
17-02-28 20:26:52.732 -08 000000059 INF: LFT found best fwhm score 2.000679 in 151 ms
17-02-28 20:26:52.732 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.732 -08 000000059 INF: LFT found good score at index 3261 with fwhm value 2.000679. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:1,B
17-02-28 20:26:52.732 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.733 -08 000000059 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.733 -08 000000033 INF: ======================================
17-02-28 20:26:52.733 -08 000000102 INF: ======================================
17-02-28 20:26:52.733 -08 000000059 INF: ======================================
17-02-28 20:26:52.734 -08 000000082 INF: LFT found best fwhm score 2.00068 in 153 ms
17-02-28 20:26:52.734 -08 000000082 INF: LFT found good score at index 81 with fwhm value 2.00068. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:1,B
17-02-28 20:26:52.734 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:26:52.734 -08 000000082 INF: ======================================
17-02-28 20:26:52.735 -08 000000039 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:26:52.736 -08 000000039 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:1,B
17-02-28 20:26:52.737 -08 000000039 INF: ======================================
17-02-28 20:26:52.738 -08 000000077 INF: ======================================
17-02-28 20:26:52.739 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:26:52.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:26:52.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:26:52.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:26:52.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:26:52.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:26:52.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:26:52.742 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:26:52.742 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:26:52.742 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:26:52.742 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 69.73618 Y = 39.78827===================
17-02-28 20:26:52.765 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:26:52.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:52.765 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:52.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:52.766 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:26:52.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 1===================
17-02-28 20:26:52.767 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:26:52.815 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:52.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:52.817 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:26:52.817 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:26:52.846 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":1,"Tile":2202,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF270","HCSMMF178","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:52.885 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:52.886 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:52.886 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:26:52.887 -08 000000042 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:26:52.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:52.887 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:52.889 -08 000000087 INF: ===================Move Tilt Motor 1===================
17-02-28 20:26:52.889 -08 000000087 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0231 mm, delta = -0.0226 mm
17-02-28 20:26:52.889 -08 000000087 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:52.890 -08 000000044 INF: ===================Move Tilt Motor 2===================
17-02-28 20:26:52.891 -08 000000044 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.3558 mm, delta = 0.0366 mm
17-02-28 20:26:52.891 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:52.892 -08 000000104 INF: ===================Move Tilt Motor 3===================
17-02-28 20:26:52.892 -08 000000104 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3028 mm, delta = 0.0363 mm
17-02-28 20:26:52.892 -08 000000104 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:52.999 -08 000000085 INF: FPGA: Recv T1RD 19776
17-02-28 20:26:52.999 -08 000000085 INF: FPGA: Recv T2RD 21086
17-02-28 20:26:52.999 -08 000000085 INF: FPGA: Recv T3RD 20876
17-02-28 20:26:52.999 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3514 + 2/6
17-02-28 20:26:52.999 -08 000000044 INF: Tilt Motor 2: Moving to 21230 encoder counts
17-02-28 20:26:52.999 -08 000000044 INF: FPGA: Xmit T2MOVETO 21230\n
17-02-28 20:26:53.002 -08 000000087 INF: Tilt Motor 1: Encoder: at motor step 3296 + 0/6
17-02-28 20:26:53.002 -08 000000087 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:26:53.002 -08 000000087 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:26:53.003 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":1,"Tile":2204,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF222","HCSMMF257","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.003 -08 000000104 INF: Tilt Motor 3: Encoder: at motor step 3479 + 2/6
17-02-28 20:26:53.003 -08 000000104 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:26:53.004 -08 000000104 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:26:53.005 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":1,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF277","HCSMMF259","HCSMMF247"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.008 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":1,"Tile":2210,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF202","HCSMMF182","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.011 -08 000000046 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":1,"Tile":2205,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF287","HCSMMF273","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.017 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":1,"Tile":2209,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF230","HCSMMF215","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.019 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":1,"Tile":2211,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF262","HCSMMF269","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.021 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":1,"Tile":2201,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF181","HCSMMF266","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.022 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":1,"Tile":2206,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF221","HCSMMF254","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.024 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":1,"Tile":2207,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF263","HCSMMF240","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.025 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":1,"Tile":2212,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF194","HCSMMF283","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.026 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":1,"Tile":2208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF278","HCSMMF188","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.029 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":1,"Tile":2213,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF245","HCSMMF219","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.030 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":1,"Tile":2214,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF197","HCSMMF213","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.031 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":1,"Tile":2215,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF268","HCSMMF196","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.033 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":1,"Tile":2220,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF282","HCSMMF281","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.034 -08 000000066 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":1,"Tile":2217,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF224","HCSMMF218","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.035 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":1,"Tile":2216,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF261","HCSMMF199","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.038 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":1,"Tile":2219,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF251","HCSMMF284","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.042 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":1,"Tile":2218,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF192","HCSMMF238","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.046 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":1,"Tile":2223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF243","HCSMMF198","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.048 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":1,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF267","HCSMMF236","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.050 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":1,"Tile":2224,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF255","HCSMMF204","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.052 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":1,"Tile":2226,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF242","HCSMMF250","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.053 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":1,"Tile":2225,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF229","HCSMMF191","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.054 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":1,"Tile":2228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF272","HCSMMF231","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.058 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":1,"Tile":2227,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF228","HCSMMF271","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.060 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 1 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":1,"Tile":2221,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF189","HCSMMF235","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:26:53.062 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:53.068 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:26:53.116 -08 000000066 INF: FPGA: Recv T1MOVETO 14
17-02-28 20:26:53.116 -08 000000066 INF: FPGA: Recv T2MOVETO 23
17-02-28 20:26:53.116 -08 000000044 INF: Tilt Motor 2: To move from 5.356 to 5.392 (0.037 mm) should take 24 steps, but required 23 steps (0.035 mm). Slippage = -0.002 mm (-0.04%)
17-02-28 20:26:53.116 -08 000000087 INF: Tilt Motor 1: To move from 5.023 to 5.000 (-0.023 mm) should take 15 steps, but required 14 steps (0.021 mm). Slippage = -0.002 mm (0.07%)
17-02-28 20:26:53.116 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:53.117 -08 000000087 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:53.151 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:53.151 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:26:53.178 -08 000000072 INF: FPGA: Recv T3MOVETO 23
17-02-28 20:26:53.178 -08 000000072 INF: FPGA: Recv T2RD 21224
17-02-28 20:26:53.178 -08 000000072 INF: FPGA: Recv T1RD 19693
17-02-28 20:26:53.178 -08 000000087 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:26:53.178 -08 000000087 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:53.178 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:26:53.178 -08 000000104 INF: Tilt Motor 3: To move from 5.303 to 5.339 (0.036 mm) should take 24 steps, but required 23 steps (0.035 mm). Slippage = -0.002 mm (-0.04%)
17-02-28 20:26:53.179 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:53.181 -08 000000104 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:53.188 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:53.194 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:26:53.240 -08 000000083 INF: FPGA: Recv T1RD 19693
17-02-28 20:26:53.240 -08 000000083 INF: FPGA: Recv T2RD 21224
17-02-28 20:26:53.240 -08 000000083 INF: FPGA: Recv T3RD 21015
17-02-28 20:26:53.240 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:26:53.240 -08 000000104 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:26:53.240 -08 000000087 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:26:53.240 -08 000000044 INF: FPGA: Xmit T2RD\n
17-02-28 20:26:53.243 -08 000000104 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:53.244 -08 000000087 INF: FPGA: Xmit T1RD\n
17-02-28 20:26:53.283 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:53.289 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:26:53.302 -08 000000046 INF: FPGA: Recv T2RD 21224
17-02-28 20:26:53.302 -08 000000046 INF: FPGA: Recv T3RD 21015
17-02-28 20:26:53.302 -08 000000046 INF: FPGA: Recv T1RD 19693
17-02-28 20:26:53.302 -08 000000087 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:26:53.302 -08 000000044 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:26:53.302 -08 000000044 INF: Tilt Motor 2: After move to 5.3924, error = -0.0015, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:53.302 -08 000000044 INF: Tilt Motor 2: Moved to 5.3909 after 411.8355 ms
17-02-28 20:26:53.303 -08 000000087 INF: Tilt Motor 1: After move to 5.0005, error = 0.0015, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:53.303 -08 000000087 INF: Tilt Motor 1: Moved to 5.0020 after 413.4352 ms
17-02-28 20:26:53.303 -08 000000044 INF: ======================================
17-02-28 20:26:53.303 -08 000000087 INF: ======================================
17-02-28 20:26:53.303 -08 000000104 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:26:53.303 -08 000000104 INF: FPGA: Xmit T3RD\n
17-02-28 20:26:53.364 -08 000000102 INF: FPGA: Recv T3RD 21015
17-02-28 20:26:53.364 -08 000000104 INF: Tilt Motor 3: Encoder: at motor step 3502 + 3/6
17-02-28 20:26:53.364 -08 000000104 INF: Tilt Motor 3: After move to 5.3391, error = -0.0013, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:53.364 -08 000000104 INF: Tilt Motor 3: Moved to 5.3378 after 472.1564 ms
17-02-28 20:26:53.364 -08 000000104 INF: ======================================
17-02-28 20:26:53.365 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:53.366 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:26:53.372 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:26:53.381 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:26:53.381 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:26:53.381 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:26:53.381 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:26:53.382 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:26:53.385 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:26:53.385 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:26:53.385 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:26:53.426 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:53.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:26:53.427 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:26:53.427 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1002 mm
17-02-28 20:26:53.427 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:26:53.491 -08 000000033 INF: FPGA: Recv ZTRG 
17-02-28 20:26:53.491 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:26:53.511 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:53.517 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:26:53.554 -08 000000073 INF: FPGA: Recv ZYT 
17-02-28 20:26:53.554 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:26:53.554 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:26:53.604 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:26:53.616 -08 000000064 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:26:53.616 -08 000000064 INF: FPGA: Recv ZMV 
17-02-28 20:26:53.616 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:26:53.616 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.8477 ms
17-02-28 20:26:53.616 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:26:53.676 -08 000000086 INF: FPGA: Recv ZDACR 60292
17-02-28 20:26:53.676 -08 000000042 INF: Z Motor: MoveAndTrigger took 249.1867 ms w/comms
17-02-28 20:26:53.676 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:26:53.676 -08 000000042 INF: Z Motor: MoveAbsStepped took 249.3639 ms
17-02-28 20:26:53.676 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:26:53.677 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:26:53.686 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:26:53.686 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:53.686 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:53.686 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:26:53.686 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:26:53.740 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:26:53.760 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:26:53.760 -08 000000042 INF: Transformed XStagePosition from 71.95064 mm to 71.9506378173828 mm.
17-02-28 20:26:53.769 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:26:53.769 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:53.769 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:26:53.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:53.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:26:53.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:53.772 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = B_1
17-02-28 20:26:53.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:53.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:53.773 -08 000000046 INF: ===================MoveEmissionFilters===================
17-02-28 20:26:53.773 -08 000000087 INF: ===================Move X,Y===================
17-02-28 20:26:53.774 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:53.774 -08 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:53.774 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:53.775 -08 000000035 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:53.775 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:53.775 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:26:53.775 -08 000000087 INF: ===================Move X,Y, Parallel===================
17-02-28 20:26:53.775 -08 000000035 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:53.776 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:26:53.776 -08 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:26:53.776 -08 000000091 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:26:53.776 -08 000000085 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:26:53.776 -08 000000052 INF: ===================Move X Motor without settling===================
17-02-28 20:26:53.776 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:26:53.776 -08 000000074 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:26:53.777 -08 000000052 INF: X Motor: Xmit PR VM\n
17-02-28 20:26:53.777 -08 000000095 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:53.777 -08 000000085 INF: ======================================
17-02-28 20:26:53.777 -08 000000091 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:26:53.777 -08 000000095 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9331 mm
17-02-28 20:26:53.777 -08 000000095 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:53.777 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:53.777 -08 000000077 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:26:53.777 -08 000000091 INF: ======================================
17-02-28 20:26:53.777 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:26:53.777 -08 000000077 INF: ======================================
17-02-28 20:26:53.778 -08 000000047 INF: ======================================
17-02-28 20:26:53.778 -08 000000036 INF: ======================================
17-02-28 20:26:53.779 -08 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:26:53.779 -08 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:26:53.779 -08 000000078 INF: ======================================
17-02-28 20:26:53.780 -08 000000030 INF: ======================================
17-02-28 20:26:53.780 -08 000000074 INF: ======================================
17-02-28 20:26:53.780 -08 000000060 INF: ======================================
17-02-28 20:26:53.781 -08 000000059 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:26:53.781 -08 000000034 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:26:53.781 -08 000000035 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:26:53.782 -08 000000059 INF: ======================================
17-02-28 20:26:53.782 -08 000000034 INF: ======================================
17-02-28 20:26:53.782 -08 000000035 INF: ======================================
17-02-28 20:26:53.783 -08 000000046 INF: ======================================
17-02-28 20:26:53.804 -08 000000052 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:26:53.804 -08 000000052 INF: X Motor: Xmit PR VI\n
17-02-28 20:26:53.866 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:53.866 -08 000000095 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:53.866 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:53.868 -08 000000052 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:26:53.868 -08 000000052 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:26:53.868 -08 000000052 INF: X Motor: Moving to 71.9506 mm @15.000 mm/sec, started at 69.7104 mm
17-02-28 20:26:53.868 -08 000000052 INF: X Motor: Xmit MA 5305\n
17-02-28 20:26:53.886 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:26:53.928 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:53.928 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:53.928 -08 000000052 INF: X Motor: Recv MA 5305\r\n>
17-02-28 20:26:53.928 -08 000000052 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:26:53.990 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:53.990 -08 000000095 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:53.990 -08 000000095 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:26:53.990 -08 000000095 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:26:54.052 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:54.052 -08 000000095 INF: Y Motor: Start the move command
17-02-28 20:26:54.052 -08 000000095 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:54.114 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:54.114 -08 000000095 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:26:54.114 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:54.247 -08 000000095 INF: Y Motor: Unshifted Position: 1080000
17-02-28 20:26:54.297 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:54.416 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:54.551 -08 000000095 INF: Y Motor: Unshifted Position: 1783299
17-02-28 20:26:54.551 -08 000000052 INF: X Motor: Xmit PR ER\n
17-02-28 20:26:54.601 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:54.615 -08 000000052 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:26:54.615 -08 000000052 INF: X Motor: Moved to 71.9517 after 687 ms
17-02-28 20:26:54.615 -08 000000052 INF: ======================================
17-02-28 20:26:54.728 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:54.864 -08 000000095 INF: Y Motor: Unshifted Position: 2565822
17-02-28 20:26:54.914 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.038 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.175 -08 000000095 INF: Y Motor: Unshifted Position: 3351593
17-02-28 20:26:55.225 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.352 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.487 -08 000000095 INF: Y Motor: Unshifted Position: 4129167
17-02-28 20:26:55.537 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.664 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.800 -08 000000095 INF: Y Motor: Unshifted Position: 4909957
17-02-28 20:26:55.850 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:55.975 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:56.111 -08 000000095 INF: Y Motor: Unshifted Position: 5683186
17-02-28 20:26:56.161 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:56.288 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:56.425 -08 000000095 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:26:56.425 -08 000000095 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:26:56.425 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:56.496 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:56.496 -08 000000095 INF: Y Motor: Moved to 64.5335 after 2381 ms
17-02-28 20:26:56.496 -08 000000095 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:26:56.550 -08 000000095 INF: Y Motor: Recv v 4096\r
17-02-28 20:26:56.550 -08 000000095 INF: Y Motor: Status After move finished OK:
17-02-28 20:26:56.550 -08 000000095 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:56.613 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:56.613 -08 000000095 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:56.613 -08 000000095 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:26:56.675 -08 000000095 INF: Y Motor: Recv v 402653184\r
17-02-28 20:26:56.675 -08 000000095 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:26:56.675 -08 000000095 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:26:56.675 -08 000000095 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:26:56.737 -08 000000095 INF: Y Motor: Recv v 0\r
17-02-28 20:26:56.737 -08 000000095 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:26:56.737 -08 000000095 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:26:56.737 -08 000000095 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:56.800 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:56.800 -08 000000095 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:26:56.800 -08 000000095 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:57.289 -08 000000050 INF: RunCopyService queue size at 2/28/2017 8:26:57 PM is 2
17-02-28 20:26:57.292 -08 000000095 INF: Y Motor: Recv ok\r
17-02-28 20:26:57.292 -08 000000095 INF: ======================================
17-02-28 20:26:57.294 -08 000000087 INF: ===================Move X,Y===================
17-02-28 20:26:57.295 -08 000000087 INF: ======================================
17-02-28 20:26:57.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:26:57.297 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:57.297 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:26:57.297 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:26:57.344 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:26:57.344 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:26:57.407 -08 000000051 INF: FPGA: Recv ZFREQCL
17-02-28 20:26:57.408 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:26:57.408 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:57.408 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:26:57.470 -08 000000038 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:26:57.470 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:26:57.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:57.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:57.474 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:26:57.474 -08 000000089 INF: ===================Set YMotor gains for scans===================
17-02-28 20:26:57.475 -08 000000089 INF: ======================================
17-02-28 20:26:57.475 -08 000000030 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:26:57.475 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:26:57.478 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:26:57.479 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:26:57.479 -08 000000030 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:26:57.530 -08 000000082 INF: FPGA: Recv TDIYPOS
17-02-28 20:26:57.530 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:26:57.533 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:26:57.533 -08 000000030 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:26:57.592 -08 000000099 INF: FPGA: Recv TDIYARM2
17-02-28 20:26:57.593 -08 000000030 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:26:57.594 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:26:57.595 -08 000000030 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:26:57.596 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:26:57.597 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:26:57.598 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:26:57.599 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:57.966 -08 000000030 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:26:57.967 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:26:57.967 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:57.982 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:26:57.985 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:26:58.365 -08 000000030 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821247560 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:26:58.365 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:26:58.365 -08 000000030 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:26:58.380 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:26:58.382 -08 000000030 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:26:58.383 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:26:58.384 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:58.385 -08 000000030 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:26:58.385 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:58.387 -08 000000030 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:26:58.387 -08 000000030 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:26:58.387 -08 000000030 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:26:58.387 -08 000000030 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:26:58.404 -08 000000029 INF: FPGA: Recv ZYT 
17-02-28 20:26:58.404 -08 000000030 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:26:58.404 -08 000000030 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:26:58.466 -08 000000036 INF: FPGA: Recv ZARM
17-02-28 20:26:58.466 -08 000000030 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0751 ms
17-02-28 20:26:58.466 -08 000000030 INF: Z Motor: ArmAbsStepped took 79.0628 ms
17-02-28 20:26:58.467 -08 000000030 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:26:58.468 -08 000000030 INF: ===================TDI Scan Setup===================
17-02-28 20:26:58.469 -08 000000030 INF: ======================================
17-02-28 20:26:58.470 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:26:58.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:26:58.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:58.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:58.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:58.475 -08 000000051 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:26:58.475 -08 000000108 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:26:58.475 -08 000000051 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:26:58.475 -08 000000051 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:26:58.475 -08 000000051 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:26:58.475 -08 000000108 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:26:58.475 -08 000000051 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:26:58.475 -08 000000108 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:26:58.475 -08 000000108 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:26:58.476 -08 000000108 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:26:58.841 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:26:58.841 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:26:58.841 -08 000000108 INF: Excitation Filter 2: Moved -107 steps in 365.9133 ms
17-02-28 20:26:58.841 -08 000000051 INF: Excitation Filter 1: Moved -107 steps in 366.1479 ms
17-02-28 20:26:58.841 -08 000000108 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.1814 ms
17-02-28 20:26:58.841 -08 000000108 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.3387 ms
17-02-28 20:26:58.841 -08 000000051 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.3733 ms
17-02-28 20:26:58.841 -08 000000051 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.5642 ms
17-02-28 20:26:58.842 -08 000000108 INF: ======================================
17-02-28 20:26:58.842 -08 000000051 INF: ======================================
17-02-28 20:26:58.844 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:58.845 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:26:58.846 -08 000000087 INF: ===================Serial===================
17-02-28 20:26:58.846 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:58.846 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:26:58.847 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:26:58.847 -08 000000087 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:26:58.847 -08 000000102 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:26:58.847 -08 000000087 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:26:58.847 -08 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:26:58.847 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:26:58.847 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:26:58.848 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:26:58.849 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:26:58.849 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:26:58.850 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:58.850 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:58.851 -08 000000047 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:26:58.851 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:58.851 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:58.905 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:26:58.905 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:26:58.905 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:26:58.967 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:26:58.967 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:26:59.001 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:59.001 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:59.002 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:59.002 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:59.029 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:26:59.029 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:26:59.029 -08 000000102 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:26:59.029 -08 000000102 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:26:59.091 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:26:59.091 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:26:59.091 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:26:59.151 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:59.151 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:59.152 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:59.152 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:59.156 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:26:59.156 -08 000000102 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:26:59.156 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:59.280 -08 000000102 INF: Y Motor: Unshifted Position: 5934734
17-02-28 20:26:59.301 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:59.301 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:59.302 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:26:59.302 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:26:59.330 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:59.451 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:26:59.451 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:26:59.451 -08 000000095 INF: ===================Camera #2 Frame #1===================
17-02-28 20:26:59.452 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:26:59.452 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:26:59.452 -08 000000044 INF: ===================Camera #0 Frame #1===================
17-02-28 20:26:59.454 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:59.593 -08 000000102 INF: Y Motor: Unshifted Position: 5888229
17-02-28 20:26:59.604 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:26:59.604 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:26:59.604 -08 000000095 INF: ===================Camera #2 Frame #3===================
17-02-28 20:26:59.605 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:26:59.605 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:26:59.605 -08 000000044 INF: ===================Camera #0 Frame #3===================
17-02-28 20:26:59.643 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:59.761 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:26:59.761 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:26:59.761 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:26:59.761 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:26:59.761 -08 000000044 INF: ===================Camera #0 Frame #4===================
17-02-28 20:26:59.761 -08 000000095 INF: ===================Camera #2 Frame #4===================
17-02-28 20:26:59.767 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:59.903 -08 000000102 INF: Y Motor: Unshifted Position: 5841372
17-02-28 20:26:59.914 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:59.914 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:59.914 -08 000000044 INF: ===================Camera #0 Frame #5===================
17-02-28 20:26:59.915 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:26:59.915 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:26:59.915 -08 000000095 INF: ===================Camera #2 Frame #5===================
17-02-28 20:26:59.953 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:26:59.963 -08 000000089 INF: FPGA: Recv ZWAIT 
17-02-28 20:26:59.963 -08 000000089 INF: FPGA: Recv TDIYWAIT
17-02-28 20:26:59.963 -08 000000087 INF: ===================Serial===================
17-02-28 20:26:59.963 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:26:59.965 -08 000000087 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:26:59.965 -08 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:26:59.965 -08 000000087 INF: ===================Serial===================
17-02-28 20:26:59.966 -08 000000034 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:26:59.966 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:26:59.966 -08 000000034 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:26:59.966 -08 000000034 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:26:59.966 -08 000000034 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:26:59.966 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:26:59.966 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:26:59.966 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:26:59.966 -08 000000034 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:26:59.967 -08 000000087 INF: ======================================
17-02-28 20:26:59.969 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:27:00.067 -08 000000044 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:27:00.067 -08 000000044 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:27:00.067 -08 000000044 INF: ===================Camera #0 Frame #6===================
17-02-28 20:27:00.068 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:27:00.068 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:27:00.068 -08 000000095 INF: ===================Camera #2 Frame #6===================
17-02-28 20:27:00.070 -08 000000044 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:27:00.071 -08 000000044 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:00.071 -08 000000095 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:27:00.072 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:00.077 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:00.111 -08 000000095 INF: Camera #2 ReleaseBuffer
17-02-28 20:27:00.111 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:27:00.112 -08 000000095 INF: ======================================
17-02-28 20:27:00.121 -08 000000044 INF: Camera #0 ReleaseBuffer
17-02-28 20:27:00.121 -08 000000044 INF: ===================Camera TDI===================
17-02-28 20:27:00.122 -08 000000044 INF: ======================================
17-02-28 20:27:00.124 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:27:00.125 -08 000000030 INF: ======================================
17-02-28 20:27:00.218 -08 000000102 INF: Y Motor: Unshifted Position: 5797054
17-02-28 20:27:00.268 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:00.339 -08 000000099 INF: FPGA: Recv EX1MV
17-02-28 20:27:00.339 -08 000000099 INF: FPGA: Recv EX2MV
17-02-28 20:27:00.339 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 372.4989 ms
17-02-28 20:27:00.339 -08 000000034 INF: Excitation Filter 1: Moved 107 steps in 372.662 ms
17-02-28 20:27:00.339 -08 000000034 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.7627 ms
17-02-28 20:27:00.339 -08 000000034 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.8594 ms
17-02-28 20:27:00.339 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.6362 ms
17-02-28 20:27:00.339 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.0289 ms
17-02-28 20:27:00.339 -08 000000034 INF: ======================================
17-02-28 20:27:00.340 -08 000000082 INF: ======================================
17-02-28 20:27:00.341 -08 000000047 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:00.342 -08 000000047 INF: ======================================
17-02-28 20:27:00.403 -08 000000102 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:27:00.403 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:00.403 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:00.464 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:00.464 -08 000000102 INF: Y Motor: Moved to 62.9704 after 1308 ms
17-02-28 20:27:00.464 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:00.527 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:27:00.527 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:00.527 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:00.589 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:00.589 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:00.589 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:00.652 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:27:00.652 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:27:00.652 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:00.652 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:00.716 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:00.716 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:00.716 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:00.716 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:00.778 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:00.778 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:00.778 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:00.840 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:00.840 -08 000000102 INF: ======================================
17-02-28 20:27:00.841 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:00.842 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:00.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:00.843 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:27:00.900 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:27:00.900 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:00.962 -08 000000033 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:27:00.962 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:27:01.024 -08 000000037 INF: FPGA: Recv ZADCR 2428
17-02-28 20:27:01.024 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:27:01.024 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:27:01.086 -08 000000047 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:27:01.086 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:27:01.086 -08 000000042 INF: TDIScan finished after 7325.4203 ms
17-02-28 20:27:01.086 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:27:01.086 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:27:01.087 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:27:01.151 -08 000000099 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:27:01.151 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.152 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.153 -08 000000105 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:27:01.153 -08 000000051 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:27:01.153 -08 000000091 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:27:01.153 -08 000000105 INF: ======================================
17-02-28 20:27:01.153 -08 000000051 INF: ======================================
17-02-28 20:27:01.153 -08 000000091 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:27:01.153 -08 000000091 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:27:01.215 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:01.215 -08 000000091 INF: ======================================
17-02-28 20:27:01.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.218 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:27:01.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.254 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:27:01.282 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.282 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:27:01.307 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.307 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:27:01.359 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:01.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:27:01.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:27:01.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:27:01.368 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:27:01.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:27:01.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:27:02.060 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1, Selecting focus point===================
17-02-28 20:27:02.083 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0808220740703186Best Z position at top surface = -0.152190169586048Best Z position at top surface + compensator offset = -0.129490169586048 C:3,L:2,B
17-02-28 20:27:02.084 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.152190169586048
17-02-28 20:27:02.084 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.93933
17-02-28 20:27:02.084 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0808220740703186
17-02-28 20:27:02.084 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59571
17-02-28 20:27:02.084 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0808220740703186.
17-02-28 20:27:02.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:27:02.217 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:27:02.217 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:27:02.273 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:02.273 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Focus Point 1===================
17-02-28 20:27:02.275 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.275 -08 000000042 INF: Lane 2, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:27:02.275 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.276 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.276 -08 000000091 INF: ===================Move Tilt Motor 1===================
17-02-28 20:27:02.276 -08 000000029 INF: ===================Move Tilt Motor 2===================
17-02-28 20:27:02.276 -08 000000044 INF: ===================Move Tilt Motor 3===================
17-02-28 20:27:02.276 -08 000000091 INF: Tilt Motor 1: Moving to 5.0005 mm, started at 5.0020 mm, delta = -0.0015 mm
17-02-28 20:27:02.277 -08 000000091 INF: FPGA: Xmit T1RD\n
17-02-28 20:27:02.277 -08 000000029 INF: Tilt Motor 2: Moving to 5.3924 mm, started at 5.3909 mm, delta = 0.0015 mm
17-02-28 20:27:02.277 -08 000000044 INF: Tilt Motor 3: Moving to 5.3391 mm, started at 5.3378 mm, delta = 0.0013 mm
17-02-28 20:27:02.283 -08 000000029 INF: FPGA: Xmit T2RD\n
17-02-28 20:27:02.285 -08 000000044 INF: FPGA: Xmit T3RD\n
17-02-28 20:27:02.335 -08 000000105 INF: FPGA: Recv T1RD 19693
17-02-28 20:27:02.335 -08 000000105 INF: FPGA: Recv T2RD 21224
17-02-28 20:27:02.335 -08 000000105 INF: FPGA: Recv T3RD 21014
17-02-28 20:27:02.335 -08 000000029 INF: Tilt Motor 2: Encoder: at motor step 3537 + 2/6
17-02-28 20:27:02.335 -08 000000091 INF: Tilt Motor 1: Encoder: at motor step 3282 + 1/6
17-02-28 20:27:02.335 -08 000000091 INF: Tilt Motor 1: Moving to 19687 encoder counts
17-02-28 20:27:02.335 -08 000000091 INF: FPGA: Xmit T1MOVETO 19687\n
17-02-28 20:27:02.335 -08 000000029 INF: Tilt Motor 2: Moving to 21230 encoder counts
17-02-28 20:27:02.335 -08 000000044 INF: Tilt Motor 3: Encoder: at motor step 3502 + 2/6
17-02-28 20:27:02.335 -08 000000044 INF: Tilt Motor 3: Moving to 21020 encoder counts
17-02-28 20:27:02.336 -08 000000044 INF: FPGA: Xmit T3MOVETO 21020\n
17-02-28 20:27:02.338 -08 000000029 INF: FPGA: Xmit T2MOVETO 21230\n
17-02-28 20:27:02.459 -08 000000036 INF: FPGA: Recv T1MOVETO 1
17-02-28 20:27:02.459 -08 000000036 INF: FPGA: Recv T3MOVETO 1
17-02-28 20:27:02.459 -08 000000036 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:27:02.459 -08 000000044 INF: Tilt Motor 3: To move from 5.338 to 5.339 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:27:02.459 -08 000000091 INF: Tilt Motor 1: To move from 5.002 to 5.000 (-0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:27:02.459 -08 000000044 INF: FPGA: Xmit T3RD\n
17-02-28 20:27:02.459 -08 000000029 INF: Tilt Motor 2: To move from 5.391 to 5.392 (0.002 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:27:02.460 -08 000000091 INF: FPGA: Xmit T1RD\n
17-02-28 20:27:02.462 -08 000000029 INF: FPGA: Xmit T2RD\n
17-02-28 20:27:02.521 -08 000000083 INF: FPGA: Recv T3RD 21021
17-02-28 20:27:02.521 -08 000000083 INF: FPGA: Recv T1RD 19687
17-02-28 20:27:02.521 -08 000000083 INF: FPGA: Recv T2RD 21230
17-02-28 20:27:02.521 -08 000000091 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:27:02.521 -08 000000029 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:27:02.521 -08 000000091 INF: FPGA: Xmit T1RD\n
17-02-28 20:27:02.521 -08 000000044 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:27:02.522 -08 000000029 INF: FPGA: Xmit T2RD\n
17-02-28 20:27:02.524 -08 000000044 INF: FPGA: Xmit T3RD\n
17-02-28 20:27:02.586 -08 000000105 INF: FPGA: Recv T1RD 19687
17-02-28 20:27:02.586 -08 000000105 INF: FPGA: Recv T2RD 21230
17-02-28 20:27:02.586 -08 000000105 INF: FPGA: Recv T3RD 21021
17-02-28 20:27:02.586 -08 000000044 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:27:02.586 -08 000000029 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:27:02.586 -08 000000091 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:27:02.586 -08 000000044 INF: FPGA: Xmit T3RD\n
17-02-28 20:27:02.587 -08 000000029 INF: FPGA: Xmit T2RD\n
17-02-28 20:27:02.589 -08 000000091 INF: FPGA: Xmit T1RD\n
17-02-28 20:27:02.649 -08 000000058 INF: FPGA: Recv T3RD 21021
17-02-28 20:27:02.649 -08 000000058 INF: FPGA: Recv T2RD 21230
17-02-28 20:27:02.649 -08 000000058 INF: FPGA: Recv T1RD 19687
17-02-28 20:27:02.649 -08 000000091 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:27:02.649 -08 000000029 INF: Tilt Motor 2: Encoder: at motor step 3538 + 2/6
17-02-28 20:27:02.649 -08 000000091 INF: Tilt Motor 1: After move to 5.0005, error = 0.0000, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:27:02.649 -08 000000029 INF: Tilt Motor 2: After move to 5.3924, error = 0.0000, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:27:02.649 -08 000000091 INF: Tilt Motor 1: Moved to 5.0005 after 372.524 ms
17-02-28 20:27:02.649 -08 000000029 INF: Tilt Motor 2: Moved to 5.3924 after 372.5784 ms
17-02-28 20:27:02.649 -08 000000044 INF: Tilt Motor 3: Encoder: at motor step 3503 + 3/6
17-02-28 20:27:02.649 -08 000000044 INF: Tilt Motor 3: After move to 5.3391, error = 0.0003, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:27:02.649 -08 000000091 INF: ======================================
17-02-28 20:27:02.649 -08 000000044 INF: Tilt Motor 3: Moved to 5.3393 after 372.7099 ms
17-02-28 20:27:02.649 -08 000000029 INF: ======================================
17-02-28 20:27:02.650 -08 000000044 INF: ======================================
17-02-28 20:27:02.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.652 -08 000000042 INF: ETF Best Z: -0.08082207 mm (21187 DAC)
17-02-28 20:27:02.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.653 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:27:02.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:02.715 -08 000000042 INF: Swath 1 position calculated to be: {X=71.39318, Y=39.78827} from estimated center X= 71.91199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:27:02.715 -08 000000042 INF: Swath 2 position calculated to be: {X=72.50118, Y=39.78827} from estimated center X= 71.91199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:27:02.720 -08 000000042 INF: Swath 0: Converted transform from (-48.58929, 7.070786) pixels to (-0.016905, 0.002415) mm.
17-02-28 20:27:02.726 -08 000000042 INF: Swath 1: Converted transform from (-67.58121, 6.369918) pixels to (-0.02346, 0.00207) mm.
17-02-28 20:27:02.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:27:02.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:27:02.728 -08 000000042 INF: Transformed XStagePosition from 71.39318 mm to 71.3762758467346 mm.
17-02-28 20:27:02.739 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5806928015091 mm.
17-02-28 20:27:02.739 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3806928015091 mm.
17-02-28 20:27:02.739 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.471442801509 mm.
17-02-28 20:27:02.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:02.741 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:27:02.742 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:02.742 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = B_1
17-02-28 20:27:02.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:02.749 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:02.749 -08 000000073 INF: ===================MoveEmissionFilters===================
17-02-28 20:27:02.749 -08 000000100 INF: ===================Move X,Y===================
17-02-28 20:27:02.750 -08 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:02.750 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:02.750 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:02.750 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:02.750 -08 000000100 INF: ===================Move X,Y, Parallel===================
17-02-28 20:27:02.750 -08 000000034 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:02.750 -08 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:27:02.750 -08 000000087 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:27:02.751 -08 000000087 INF: Z Motor: Moving to -0.1008 mm, started at -0.0100 mm
17-02-28 20:27:02.751 -08 000000087 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:27:02.751 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:02.751 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:02.751 -08 000000034 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:02.751 -08 000000083 INF: ===================Move X Motor without settling===================
17-02-28 20:27:02.751 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:02.751 -08 000000083 INF: X Motor: Xmit PR VM\n
17-02-28 20:27:02.752 -08 000000060 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:27:02.752 -08 000000074 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:27:02.752 -08 000000037 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:27:02.752 -08 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:27:02.752 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:27:02.752 -08 000000098 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:27:02.752 -08 000000037 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:27:02.752 -08 000000047 INF: ======================================
17-02-28 20:27:02.752 -08 000000060 INF: ======================================
17-02-28 20:27:02.752 -08 000000062 INF: Y Motor: Moving to 64.5807 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:27:02.753 -08 000000098 INF: ======================================
17-02-28 20:27:02.753 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:02.753 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:02.753 -08 000000038 INF: ======================================
17-02-28 20:27:02.754 -08 000000034 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:02.754 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:02.754 -08 000000098 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:27:02.754 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:27:02.755 -08 000000036 INF: ======================================
17-02-28 20:27:02.755 -08 000000037 INF: ======================================
17-02-28 20:27:02.755 -08 000000074 INF: ======================================
17-02-28 20:27:02.756 -08 000000034 INF: ======================================
17-02-28 20:27:02.756 -08 000000098 INF: ======================================
17-02-28 20:27:02.756 -08 000000089 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:02.756 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:02.757 -08 000000091 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:02.757 -08 000000089 INF: ======================================
17-02-28 20:27:02.757 -08 000000029 INF: ======================================
17-02-28 20:27:02.758 -08 000000091 INF: ======================================
17-02-28 20:27:02.759 -08 000000073 INF: ======================================
17-02-28 20:27:02.772 -08 000000102 INF: FPGA: Recv ZTRG 
17-02-28 20:27:02.772 -08 000000087 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:27:02.836 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:27:02.836 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:02.836 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:02.836 -08 000000083 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:27:02.836 -08 000000083 INF: X Motor: Xmit PR VI\n
17-02-28 20:27:02.836 -08 000000037 INF: FPGA: Recv ZYT 
17-02-28 20:27:02.836 -08 000000087 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:27:02.836 -08 000000087 INF: FPGA: Xmit ZMV 26429\n
17-02-28 20:27:02.896 -08 000000051 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:27:02.896 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:27:02.898 -08 000000083 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:27:02.898 -08 000000083 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:27:02.898 -08 000000083 INF: X Motor: Moving to 71.3763 mm @15.000 mm/sec, started at 71.9517 mm
17-02-28 20:27:02.898 -08 000000083 INF: X Motor: Xmit MA 5069\n
17-02-28 20:27:02.899 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:27:02.899 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:02.958 -08 000000074 INF: FPGA: Recv ZMV 
17-02-28 20:27:02.958 -08 000000087 INF: Z Motor: MoveAndTrigger 'ZMV' command took 121.4046 ms
17-02-28 20:27:02.958 -08 000000087 INF: FPGA: Xmit ZDACR\n
17-02-28 20:27:02.960 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:27:02.960 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:02.960 -08 000000083 INF: X Motor: Recv MA 5069\r\n>
17-02-28 20:27:02.960 -08 000000062 INF: Y Motor: Set target position to 5958069 encoder counts
17-02-28 20:27:02.960 -08 000000062 INF: Y Motor: Xmit s r0xca 5958069\r
17-02-28 20:27:02.960 -08 000000083 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:27:03.020 -08 000000078 INF: FPGA: Recv ZDACR 26429
17-02-28 20:27:03.020 -08 000000087 INF: Z Motor: MoveAndTrigger took 269.4367 ms w/comms
17-02-28 20:27:03.020 -08 000000087 INF: Z Motor: After move to -0.1008, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:27:03.020 -08 000000087 INF: Z Motor: MoveAbsStepped took 269.6062 ms
17-02-28 20:27:03.020 -08 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:03.022 -08 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:27:03.023 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:27:03.023 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:27:03.023 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:27:03.023 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:03.023 -08 000000044 INF: ===================Camera Arm TDI===================
17-02-28 20:27:03.023 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:03.024 -08 000000044 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:03.024 -08 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:03.024 -08 000000044 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:03.025 -08 000000047 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:03.025 -08 000000047 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:27:03.085 -08 000000030 INF: FPGA: Recv ZSEL 
17-02-28 20:27:03.086 -08 000000047 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:03.086 -08 000000047 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:27:03.087 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:27:03.087 -08 000000062 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:27:03.087 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:03.147 -08 000000077 INF: FPGA: Recv TDIBB
17-02-28 20:27:03.147 -08 000000047 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:03.148 -08 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:03.149 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:03.150 -08 000000047 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:27:03.151 -08 000000047 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:27:03.151 -08 000000047 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:27:03.209 -08 000000038 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:03.209 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:03.211 -08 000000062 INF: Y Motor: Unshifted Position: 5881074
17-02-28 20:27:03.211 -08 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:27:03.211 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:03.213 -08 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:27:03.213 -08 000000047 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:27:03.213 -08 000000047 INF: Z Motor: Arming to move to -0.0608 mm
17-02-28 20:27:03.213 -08 000000047 INF: FPGA: Xmit ZYT 6438069 4\n
17-02-28 20:27:03.261 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:03.271 -08 000000102 INF: FPGA: Recv ZYT 
17-02-28 20:27:03.271 -08 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381074 enc / 63.811 mm / ) = 6438069 enc / 64.381 mm
17-02-28 20:27:03.271 -08 000000047 INF: FPGA: Xmit ZARM 15944\n
17-02-28 20:27:03.333 -08 000000058 INF: FPGA: Recv ZARM
17-02-28 20:27:03.333 -08 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9443 ms
17-02-28 20:27:03.333 -08 000000047 INF: Z Motor: ArmAbsStepped took 119.7231 ms
17-02-28 20:27:03.333 -08 000000047 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:03.334 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:27:03.336 -08 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:27:03.336 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:27:03.338 -08 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:27:03.338 -08 000000047 INF: ===================TDI Scan Setup===================
17-02-28 20:27:03.339 -08 000000047 INF: ======================================
17-02-28 20:27:03.385 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:03.397 -08 000000083 INF: X Motor: Xmit PR ER\n
17-02-28 20:27:03.459 -08 000000083 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:27:03.459 -08 000000083 INF: X Motor: Moved to 71.3755 after 498 ms
17-02-28 20:27:03.459 -08 000000083 INF: ======================================
17-02-28 20:27:03.524 -08 000000062 INF: Y Motor: Unshifted Position: 5958070
17-02-28 20:27:03.524 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:03.524 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:03.586 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:27:03.586 -08 000000062 INF: Y Motor: Moved to 64.5807 after 499 ms
17-02-28 20:27:03.586 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:03.646 -08 000000062 INF: Y Motor: Recv v 4096\r
17-02-28 20:27:03.646 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:03.646 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:03.711 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:27:03.711 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:03.711 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:03.773 -08 000000062 INF: Y Motor: Recv v 402653184\r
17-02-28 20:27:03.773 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:27:03.773 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:03.773 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:03.835 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:27:03.835 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:03.835 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:03.835 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:03.897 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:27:03.897 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:03.897 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:03.959 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:27:03.959 -08 000000062 INF: ======================================
17-02-28 20:27:03.960 -08 000000100 INF: ===================Move X,Y===================
17-02-28 20:27:03.961 -08 000000100 INF: ======================================
17-02-28 20:27:03.964 -08 000000044 INF: Camera #0 AttachBuffer (imageDataPtr = 56929357872 imgPtr = 56929357872 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:03.964 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:03.965 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:03.980 -08 000000044 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:03.982 -08 000000044 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:05.426 -08 000000044 INF: Camera #2 AttachBuffer (imageDataPtr = 58741297200 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:05.426 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:05.426 -08 000000044 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:05.441 -08 000000044 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:05.443 -08 000000044 INF: ===================Camera Arm TDI===================
17-02-28 20:27:05.444 -08 000000044 INF: ======================================
17-02-28 20:27:05.445 -08 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:05.446 -08 000000087 INF: ======================================
17-02-28 20:27:05.447 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:05.448 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:05.448 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:27:05.448 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:27:05.518 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:27:05.518 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:27:05.581 -08 000000098 INF: FPGA: Recv ZFREQCL
17-02-28 20:27:05.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:27:05.581 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:05.581 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:05.643 -08 000000095 INF: FPGA: Recv TDIYERD 6458070
17-02-28 20:27:05.644 -08 000000042 INF: Before scan, Y encoder from FPGA = 6458070 counts (64.581 mm)
17-02-28 20:27:05.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:05.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:05.645 -08 000000058 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:05.645 -08 000000077 INF: ===================Set YMotor gains for scans===================
17-02-28 20:27:05.646 -08 000000077 INF: ======================================
17-02-28 20:27:05.646 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:05.646 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:27:05.647 -08 000000058 INF: FPGA: Xmit TDIYPOS 6347144\n
17-02-28 20:27:05.703 -08 000000047 INF: FPGA: Recv TDIYPOS
17-02-28 20:27:05.703 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:05.704 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:27:05.705 -08 000000058 INF: FPGA: Xmit TDIYARM3 139264 6438069 1 1\n
17-02-28 20:27:05.769 -08 000000051 INF: FPGA: Recv TDIYARM3
17-02-28 20:27:05.769 -08 000000058 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:05.770 -08 000000058 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:05.771 -08 000000058 INF: ======================================
17-02-28 20:27:05.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:05.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:05.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:05.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:05.774 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:05.775 -08 000000060 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:27:05.775 -08 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:27:05.775 -08 000000060 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:27:05.775 -08 000000060 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:27:05.775 -08 000000060 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:27:05.775 -08 000000037 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:27:05.775 -08 000000060 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:27:05.775 -08 000000037 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:27:05.775 -08 000000037 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:27:05.776 -08 000000037 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:27:06.141 -08 000000038 INF: FPGA: Recv EX2MV
17-02-28 20:27:06.141 -08 000000038 INF: FPGA: Recv EX1MV
17-02-28 20:27:06.141 -08 000000037 INF: Excitation Filter 1: Moved -107 steps in 365.7673 ms
17-02-28 20:27:06.141 -08 000000037 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.9182 ms
17-02-28 20:27:06.141 -08 000000037 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.9936 ms
17-02-28 20:27:06.141 -08 000000060 INF: Excitation Filter 2: Moved -107 steps in 365.9844 ms
17-02-28 20:27:06.141 -08 000000060 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.1813 ms
17-02-28 20:27:06.141 -08 000000060 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.2501 ms
17-02-28 20:27:06.141 -08 000000037 INF: ======================================
17-02-28 20:27:06.141 -08 000000060 INF: ======================================
17-02-28 20:27:06.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:06.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:06.144 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:27:06.144 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:06.144 -08 000000062 INF: ===================FPGA Z Wait===================
17-02-28 20:27:06.144 -08 000000066 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:06.145 -08 000000066 INF: Y Motor: Moving to 14.9324 mm @6.500 mm/sec, started at 64.5807 mm
17-02-28 20:27:06.145 -08 000000062 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:27:06.145 -08 000000066 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:06.145 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:06.145 -08 000000085 INF: ===================Camera TDI, Parallel===================
17-02-28 20:27:06.145 -08 000000076 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:27:06.146 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:27:06.146 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:27:06.146 -08 000000076 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:27:06.147 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:06.147 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:06.148 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:06.148 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:06.205 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:27:06.205 -08 000000066 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:06.205 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:06.267 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:27:06.267 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:06.297 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:06.297 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:06.298 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:06.298 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:06.330 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:27:06.330 -08 000000066 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:06.330 -08 000000066 INF: Y Motor: Set target position to 993236 encoder counts
17-02-28 20:27:06.330 -08 000000066 INF: Y Motor: Xmit s r0xca 993236\r
17-02-28 20:27:06.396 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:27:06.396 -08 000000066 INF: Y Motor: Start the move command
17-02-28 20:27:06.396 -08 000000066 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:06.448 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:06.448 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:06.449 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:06.449 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:06.455 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:27:06.455 -08 000000066 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:27:06.455 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:06.518 -08 000000039 INF: FPGA: Recv ZWAIT 
17-02-28 20:27:06.518 -08 000000062 INF: ======================================
17-02-28 20:27:06.582 -08 000000066 INF: Y Motor: Unshifted Position: 5896220
17-02-28 20:27:06.598 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:27:06.598 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:27:06.598 -08 000000050 INF: ===================Camera #0 Frame #4===================
17-02-28 20:27:06.599 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:27:06.599 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:27:06.599 -08 000000082 INF: ===================Camera #2 Frame #4===================
17-02-28 20:27:06.632 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:06.758 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:06.761 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:27:06.761 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:27:06.761 -08 000000050 INF: ===================Camera #0 Frame #10===================
17-02-28 20:27:06.763 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:27:06.763 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:27:06.763 -08 000000082 INF: ===================Camera #2 Frame #10===================
17-02-28 20:27:06.894 -08 000000066 INF: Y Motor: Unshifted Position: 5693201
17-02-28 20:27:06.930 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:06.930 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:06.930 -08 000000050 INF: ===================Camera #0 Frame #17===================
17-02-28 20:27:06.933 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:06.933 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:06.933 -08 000000082 INF: ===================Camera #2 Frame #17===================
17-02-28 20:27:06.944 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.069 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.103 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:27:07.103 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:27:07.103 -08 000000050 INF: ===================Camera #0 Frame #23===================
17-02-28 20:27:07.107 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:27:07.107 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:27:07.107 -08 000000082 INF: ===================Camera #2 Frame #23===================
17-02-28 20:27:07.204 -08 000000066 INF: Y Motor: Unshifted Position: 5491703
17-02-28 20:27:07.254 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.273 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:27:07.273 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:27:07.273 -08 000000050 INF: ===================Camera #0 Frame #29===================
17-02-28 20:27:07.278 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:27:07.278 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:27:07.278 -08 000000082 INF: ===================Camera #2 Frame #29===================
17-02-28 20:27:07.382 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.443 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:27:07.443 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:27:07.443 -08 000000050 INF: ===================Camera #0 Frame #36===================
17-02-28 20:27:07.448 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:27:07.448 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:27:07.448 -08 000000082 INF: ===================Camera #2 Frame #36===================
17-02-28 20:27:07.518 -08 000000066 INF: Y Motor: Unshifted Position: 5287388
17-02-28 20:27:07.568 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.616 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:27:07.616 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:27:07.616 -08 000000050 INF: ===================Camera #0 Frame #42===================
17-02-28 20:27:07.622 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:27:07.622 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:27:07.622 -08 000000082 INF: ===================Camera #2 Frame #42===================
17-02-28 20:27:07.691 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.786 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:27:07.786 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:27:07.786 -08 000000050 INF: ===================Camera #0 Frame #48===================
17-02-28 20:27:07.792 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:27:07.792 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:27:07.792 -08 000000082 INF: ===================Camera #2 Frame #48===================
17-02-28 20:27:07.830 -08 000000066 INF: Y Motor: Unshifted Position: 5084583
17-02-28 20:27:07.880 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:07.954 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:27:07.954 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:27:07.954 -08 000000050 INF: ===================Camera #0 Frame #54===================
17-02-28 20:27:07.960 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:27:07.960 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:27:07.960 -08 000000082 INF: ===================Camera #2 Frame #55===================
17-02-28 20:27:08.004 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.124 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:27:08.124 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:27:08.124 -08 000000050 INF: ===================Camera #0 Frame #61===================
17-02-28 20:27:08.134 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:27:08.134 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:27:08.134 -08 000000082 INF: ===================Camera #2 Frame #61===================
17-02-28 20:27:08.140 -08 000000066 INF: Y Motor: Unshifted Position: 4882865
17-02-28 20:27:08.190 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.296 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:27:08.296 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:27:08.296 -08 000000050 INF: ===================Camera #0 Frame #67===================
17-02-28 20:27:08.304 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:27:08.304 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:27:08.304 -08 000000082 INF: ===================Camera #2 Frame #67===================
17-02-28 20:27:08.318 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.454 -08 000000066 INF: Y Motor: Unshifted Position: 4678764
17-02-28 20:27:08.465 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:27:08.465 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:27:08.465 -08 000000050 INF: ===================Camera #0 Frame #73===================
17-02-28 20:27:08.474 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:27:08.474 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:27:08.474 -08 000000082 INF: ===================Camera #2 Frame #73===================
17-02-28 20:27:08.504 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.628 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.635 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:27:08.635 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:27:08.635 -08 000000050 INF: ===================Camera #0 Frame #79===================
17-02-28 20:27:08.645 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:27:08.645 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:27:08.645 -08 000000082 INF: ===================Camera #2 Frame #80===================
17-02-28 20:27:08.766 -08 000000066 INF: Y Motor: Unshifted Position: 4475951
17-02-28 20:27:08.805 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:27:08.805 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:27:08.805 -08 000000050 INF: ===================Camera #0 Frame #86===================
17-02-28 20:27:08.816 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.819 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:27:08.819 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:27:08.819 -08 000000082 INF: ===================Camera #2 Frame #86===================
17-02-28 20:27:08.940 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:08.978 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:27:08.978 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:27:08.978 -08 000000050 INF: ===================Camera #0 Frame #92===================
17-02-28 20:27:08.990 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:27:08.990 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:27:08.990 -08 000000082 INF: ===================Camera #2 Frame #92===================
17-02-28 20:27:09.077 -08 000000066 INF: Y Motor: Unshifted Position: 4274241
17-02-28 20:27:09.127 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:09.148 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:27:09.148 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:27:09.148 -08 000000050 INF: ===================Camera #0 Frame #98===================
17-02-28 20:27:09.161 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:27:09.161 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:27:09.161 -08 000000082 INF: ===================Camera #2 Frame #99===================
17-02-28 20:27:09.254 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:09.318 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:27:09.318 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:27:09.318 -08 000000050 INF: ===================Camera #0 Frame #105===================
17-02-28 20:27:09.335 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:27:09.335 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:27:09.335 -08 000000082 INF: ===================Camera #2 Frame #105===================
17-02-28 20:27:09.390 -08 000000066 INF: Y Motor: Unshifted Position: 4071869
17-02-28 20:27:09.440 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:09.491 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:27:09.491 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:27:09.491 -08 000000050 INF: ===================Camera #0 Frame #111===================
17-02-28 20:27:09.506 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:27:09.506 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:27:09.506 -08 000000082 INF: ===================Camera #2 Frame #111===================
17-02-28 20:27:09.564 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:09.661 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:27:09.661 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:27:09.661 -08 000000050 INF: ===================Camera #0 Frame #117===================
17-02-28 20:27:09.676 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:27:09.676 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:27:09.676 -08 000000082 INF: ===================Camera #2 Frame #118===================
17-02-28 20:27:09.700 -08 000000066 INF: Y Motor: Unshifted Position: 3867123
17-02-28 20:27:09.750 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:09.831 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:27:09.831 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:27:09.831 -08 000000050 INF: ===================Camera #0 Frame #123===================
17-02-28 20:27:09.850 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:27:09.850 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:27:09.850 -08 000000082 INF: ===================Camera #2 Frame #124===================
17-02-28 20:27:09.878 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.001 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:27:10.001 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:27:10.001 -08 000000050 INF: ===================Camera #0 Frame #130===================
17-02-28 20:27:10.014 -08 000000066 INF: Y Motor: Unshifted Position: 3666271
17-02-28 20:27:10.021 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:27:10.021 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:27:10.021 -08 000000082 INF: ===================Camera #2 Frame #130===================
17-02-28 20:27:10.064 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.173 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:27:10.173 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:27:10.173 -08 000000050 INF: ===================Camera #0 Frame #136===================
17-02-28 20:27:10.190 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.192 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:27:10.192 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:27:10.192 -08 000000082 INF: ===================Camera #2 Frame #137===================
17-02-28 20:27:10.324 -08 000000066 INF: Y Motor: Unshifted Position: 3462608
17-02-28 20:27:10.343 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:27:10.343 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:27:10.343 -08 000000050 INF: ===================Camera #0 Frame #142===================
17-02-28 20:27:10.366 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:27:10.366 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:27:10.366 -08 000000082 INF: ===================Camera #2 Frame #143===================
17-02-28 20:27:10.374 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.502 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.513 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:27:10.513 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:27:10.513 -08 000000050 INF: ===================Camera #0 Frame #149===================
17-02-28 20:27:10.537 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:27:10.537 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:27:10.537 -08 000000082 INF: ===================Camera #2 Frame #149===================
17-02-28 20:27:10.638 -08 000000066 INF: Y Motor: Unshifted Position: 3260458
17-02-28 20:27:10.686 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:27:10.686 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:27:10.686 -08 000000050 INF: ===================Camera #0 Frame #155===================
17-02-28 20:27:10.688 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.708 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:27:10.708 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:27:10.708 -08 000000082 INF: ===================Camera #2 Frame #156===================
17-02-28 20:27:10.814 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:10.854 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:27:10.854 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:27:10.854 -08 000000050 INF: ===================Camera #0 Frame #161===================
17-02-28 20:27:10.880 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:27:10.880 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:27:10.880 -08 000000082 INF: ===================Camera #2 Frame #162===================
17-02-28 20:27:10.950 -08 000000066 INF: Y Motor: Unshifted Position: 3057445
17-02-28 20:27:11.000 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:11.022 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:27:11.022 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:27:11.022 -08 000000050 INF: ===================Camera #0 Frame #167===================
17-02-28 20:27:11.049 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:27:11.049 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:27:11.049 -08 000000082 INF: ===================Camera #2 Frame #168===================
17-02-28 20:27:11.124 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:11.190 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:27:11.190 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:27:11.190 -08 000000050 INF: ===================Camera #0 Frame #173===================
17-02-28 20:27:11.218 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:27:11.218 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:27:11.218 -08 000000082 INF: ===================Camera #2 Frame #175===================
17-02-28 20:27:11.260 -08 000000066 INF: Y Motor: Unshifted Position: 2853782
17-02-28 20:27:11.310 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:11.358 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:27:11.358 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:27:11.358 -08 000000050 INF: ===================Camera #0 Frame #180===================
17-02-28 20:27:11.390 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:27:11.390 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:27:11.390 -08 000000082 INF: ===================Camera #2 Frame #181===================
17-02-28 20:27:11.438 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:11.531 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:27:11.531 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:27:11.531 -08 000000050 INF: ===================Camera #0 Frame #186===================
17-02-28 20:27:11.561 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:27:11.561 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:27:11.561 -08 000000082 INF: ===================Camera #2 Frame #187===================
17-02-28 20:27:11.574 -08 000000066 INF: Y Motor: Unshifted Position: 2651631
17-02-28 20:27:11.624 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:11.700 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:27:11.700 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:27:11.700 -08 000000050 INF: ===================Camera #0 Frame #192===================
17-02-28 20:27:11.731 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:27:11.731 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:27:11.731 -08 000000082 INF: ===================Camera #2 Frame #193===================
17-02-28 20:27:11.747 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:11.870 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:27:11.870 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:27:11.870 -08 000000050 INF: ===================Camera #0 Frame #199===================
17-02-28 20:27:11.886 -08 000000066 INF: Y Motor: Unshifted Position: 2448616
17-02-28 20:27:11.902 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:27:11.902 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:27:11.902 -08 000000082 INF: ===================Camera #2 Frame #200===================
17-02-28 20:27:11.936 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.042 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:27:12.042 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:27:12.042 -08 000000050 INF: ===================Camera #0 Frame #205===================
17-02-28 20:27:12.060 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.076 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:27:12.076 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:27:12.076 -08 000000082 INF: ===================Camera #2 Frame #206===================
17-02-28 20:27:12.196 -08 000000066 INF: Y Motor: Unshifted Position: 2243868
17-02-28 20:27:12.212 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:27:12.212 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:27:12.212 -08 000000050 INF: ===================Camera #0 Frame #211===================
17-02-28 20:27:12.246 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.247 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:27:12.247 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:27:12.247 -08 000000082 INF: ===================Camera #2 Frame #212===================
17-02-28 20:27:12.374 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.382 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:27:12.382 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:27:12.382 -08 000000050 INF: ===================Camera #0 Frame #217===================
17-02-28 20:27:12.418 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:27:12.418 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:27:12.418 -08 000000082 INF: ===================Camera #2 Frame #219===================
17-02-28 20:27:12.511 -08 000000066 INF: Y Motor: Unshifted Position: 2042803
17-02-28 20:27:12.552 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:27:12.552 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:27:12.552 -08 000000050 INF: ===================Camera #0 Frame #224===================
17-02-28 20:27:12.561 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.592 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:27:12.592 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:27:12.592 -08 000000082 INF: ===================Camera #2 Frame #225===================
17-02-28 20:27:12.684 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.725 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:27:12.725 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:27:12.725 -08 000000050 INF: ===================Camera #0 Frame #230===================
17-02-28 20:27:12.763 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:27:12.763 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:27:12.763 -08 000000082 INF: ===================Camera #2 Frame #231===================
17-02-28 20:27:12.822 -08 000000066 INF: Y Motor: Unshifted Position: 1840005
17-02-28 20:27:12.872 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:12.895 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:27:12.895 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:27:12.895 -08 000000050 INF: ===================Camera #0 Frame #236===================
17-02-28 20:27:12.934 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:27:12.934 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:27:12.934 -08 000000082 INF: ===================Camera #2 Frame #238===================
17-02-28 20:27:12.996 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.064 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:27:13.064 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:27:13.064 -08 000000050 INF: ===================Camera #0 Frame #242===================
17-02-28 20:27:13.106 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:27:13.106 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:27:13.106 -08 000000082 INF: ===================Camera #2 Frame #244===================
17-02-28 20:27:13.132 -08 000000066 INF: Y Motor: Unshifted Position: 1636119
17-02-28 20:27:13.182 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.232 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:27:13.232 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:27:13.232 -08 000000050 INF: ===================Camera #0 Frame #249===================
17-02-28 20:27:13.275 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:27:13.275 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:27:13.275 -08 000000082 INF: ===================Camera #2 Frame #250===================
17-02-28 20:27:13.306 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.405 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:27:13.405 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:27:13.405 -08 000000050 INF: ===================Camera #0 Frame #255===================
17-02-28 20:27:13.445 -08 000000066 INF: Y Motor: Unshifted Position: 1432881
17-02-28 20:27:13.446 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:27:13.446 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:27:13.446 -08 000000082 INF: ===================Camera #2 Frame #257===================
17-02-28 20:27:13.495 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.574 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:27:13.574 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:27:13.574 -08 000000050 INF: ===================Camera #0 Frame #261===================
17-02-28 20:27:13.620 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:27:13.620 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:27:13.620 -08 000000082 INF: ===================Camera #2 Frame #263===================
17-02-28 20:27:13.621 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.744 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:27:13.744 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:27:13.744 -08 000000050 INF: ===================Camera #0 Frame #268===================
17-02-28 20:27:13.756 -08 000000066 INF: Y Motor: Unshifted Position: 1231147
17-02-28 20:27:13.791 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:27:13.791 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:27:13.791 -08 000000082 INF: ===================Camera #2 Frame #269===================
17-02-28 20:27:13.806 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.878 -08 000000069 INF: FPGA: Recv TDIYWAIT
17-02-28 20:27:13.879 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:13.880 -08 000000076 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:27:13.881 -08 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:27:13.881 -08 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:27:13.881 -08 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:27:13.881 -08 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:27:13.881 -08 000000087 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:27:13.881 -08 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:27:13.881 -08 000000087 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:27:13.881 -08 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:27:13.881 -08 000000090 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:27:13.884 -08 000000090 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:27:13.916 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:27:13.916 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:27:13.916 -08 000000050 INF: ===================Camera #0 Frame #272===================
17-02-28 20:27:13.929 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:27:13.930 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:13.930 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:14.069 -08 000000066 INF: Y Motor: Unshifted Position: 1026408
17-02-28 20:27:14.095 -08 000000050 INF: Camera #0 ReleaseBuffer
17-02-28 20:27:14.095 -08 000000082 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:27:14.095 -08 000000082 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:27:14.095 -08 000000082 INF: ===================Camera #2 Frame #272===================
17-02-28 20:27:14.095 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:27:14.105 -08 000000082 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:27:14.106 -08 000000082 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:14.119 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:14.129 -08 000000050 INF: ======================================
17-02-28 20:27:14.253 -08 000000098 INF: FPGA: Recv EX1MV
17-02-28 20:27:14.253 -08 000000098 INF: FPGA: Recv EX2MV
17-02-28 20:27:14.253 -08 000000090 INF: Excitation Filter 2: Moved 107 steps in 371.4756 ms
17-02-28 20:27:14.253 -08 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.6131 ms
17-02-28 20:27:14.253 -08 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.7151 ms
17-02-28 20:27:14.253 -08 000000087 INF: Excitation Filter 1: Moved 107 steps in 371.696 ms
17-02-28 20:27:14.253 -08 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9051 ms
17-02-28 20:27:14.253 -08 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9998 ms
17-02-28 20:27:14.253 -08 000000090 INF: ======================================
17-02-28 20:27:14.253 -08 000000087 INF: ======================================
17-02-28 20:27:14.255 -08 000000066 INF: Y Motor: Unshifted Position: 993237
17-02-28 20:27:14.255 -08 000000066 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:14.255 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:14.255 -08 000000076 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:14.256 -08 000000076 INF: ======================================
17-02-28 20:27:14.302 -08 000000082 INF: Camera #2 ReleaseBuffer
17-02-28 20:27:14.302 -08 000000082 INF: ===================Camera TDI===================
17-02-28 20:27:14.317 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:27:14.317 -08 000000066 INF: Y Motor: Moved to 14.9324 after 7862 ms
17-02-28 20:27:14.317 -08 000000066 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:14.337 -08 000000082 INF: ======================================
17-02-28 20:27:14.338 -08 000000085 INF: ===================Camera TDI===================
17-02-28 20:27:14.339 -08 000000085 INF: ======================================
17-02-28 20:27:14.383 -08 000000066 INF: Y Motor: Recv v 4097\r
17-02-28 20:27:14.383 -08 000000066 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:14.383 -08 000000066 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:14.444 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:27:14.444 -08 000000066 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:14.444 -08 000000066 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:14.506 -08 000000066 INF: Y Motor: Recv v 134217728\r
17-02-28 20:27:14.506 -08 000000066 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:27:14.506 -08 000000066 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:14.506 -08 000000066 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:14.568 -08 000000066 INF: Y Motor: Recv v 0\r
17-02-28 20:27:14.568 -08 000000066 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:14.568 -08 000000066 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:14.568 -08 000000066 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:14.630 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:27:14.630 -08 000000066 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:14.630 -08 000000066 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:14.692 -08 000000066 INF: Y Motor: Recv ok\r
17-02-28 20:27:14.692 -08 000000066 INF: ======================================
17-02-28 20:27:14.693 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:14.694 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:14.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:14.695 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:27:14.752 -08 000000077 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:27:14.752 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:14.814 -08 000000036 INF: FPGA: Recv TDIYERD 1493237
17-02-28 20:27:14.814 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:27:14.879 -08 000000060 INF: FPGA: Recv ZADCR 20578
17-02-28 20:27:14.879 -08 000000042 INF: At scan end Y pos = 14.932 and Z pos = -0.079. Y moved -48.539 mm
17-02-28 20:27:14.879 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:27:14.941 -08 000000034 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:27:14.941 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:27:14.941 -08 000000042 INF: TDIScan finished after 12212.7565 ms
17-02-28 20:27:14.941 -08 000000042 INF: Image[0]: Y should trigger at 63.471 mm, 2nd row was at 64.380 mm (error = 0.909 mm)
17-02-28 20:27:14.941 -08 000000042 INF: Image[2]: Y should trigger at 63.471 mm, 2nd row was at 64.380 mm (error = 0.909 mm)
17-02-28 20:27:14.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:14.975 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.719 um
17-02-28 20:27:14.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:14.976 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:27:15.003 -08 000000102 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:27:15.003 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.004 -08 000000051 INF: ===================Dither Clean Up Command===================
17-02-28 20:27:15.004 -08 000000074 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:27:15.004 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:27:15.004 -08 000000095 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:27:15.004 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:27:15.004 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:27:15.004 -08 000000095 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:27:15.004 -08 000000095 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:27:15.005 -08 000000074 INF: ======================================
17-02-28 20:27:15.005 -08 000000062 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:27:15.005 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:15.006 -08 000000062 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:27:15.008 -08 000000044 INF: ===================LFT:Extracting coords===================
17-02-28 20:27:15.033 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:15.034 -08 000000044 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:27:15.034 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.034 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.034 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.035 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.035 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:15.035 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:15.035 -08 000000034 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:15.035 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:15.067 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:27:15.067 -08 000000038 INF: ======================================
17-02-28 20:27:15.067 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:15.067 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:27:15.068 -08 000000062 INF: FPGA: Xmit ZDACW 26429\n
17-02-28 20:27:15.068 -08 000000095 INF: ======================================
17-02-28 20:27:15.109 -08 000000082 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:15.109 -08 000000039 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:15.109 -08 000000034 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:15.117 -08 000000098 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:15.129 -08 000000036 INF: FPGA: Recv ZDACW 
17-02-28 20:27:15.130 -08 000000062 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:27:15.130 -08 000000062 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:27:15.189 -08 000000091 INF: FPGA: Recv TDIBB
17-02-28 20:27:15.189 -08 000000062 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:27:15.190 -08 000000062 INF: ======================================
17-02-28 20:27:15.260 -08 000000082 INF: LFT found best fwhm score 2.00008 in 151 ms
17-02-28 20:27:15.260 -08 000000082 INF: LFT found good score at index 57 with fwhm value 2.00008. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:2,B
17-02-28 20:27:15.260 -08 000000034 INF: LFT found best fwhm score 2.000025 in 151 ms
17-02-28 20:27:15.260 -08 000000039 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:27:15.260 -08 000000034 INF: LFT found good score at index 4837 with fwhm value 2.000025. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:2,B
17-02-28 20:27:15.261 -08 000000039 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0808220740703186 in the next cycle, cycle 4 FC:B, C:3,L:2,B
17-02-28 20:27:15.261 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.261 -08 000000034 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.261 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.261 -08 000000082 INF: ======================================
17-02-28 20:27:15.261 -08 000000034 INF: ======================================
17-02-28 20:27:15.261 -08 000000039 INF: ======================================
17-02-28 20:27:15.285 -08 000000098 INF: LFT found best fwhm score 2.000241 in 167 ms
17-02-28 20:27:15.285 -08 000000098 INF: LFT found good score at index 873 with fwhm value 2.000241. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:2,B
17-02-28 20:27:15.286 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:27:15.286 -08 000000098 INF: ======================================
17-02-28 20:27:15.288 -08 000000044 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:15.288 -08 000000044 INF: LFT weighted average best Z for bottom surface is at -0.079mm FC:B, C:3,L:2,B
17-02-28 20:27:15.289 -08 000000044 INF: ======================================
17-02-28 20:27:15.290 -08 000000051 INF: ======================================
17-02-28 20:27:15.291 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:27:15.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:27:15.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:27:15.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:27:15.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:27:15.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:27:15.294 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:27:15.294 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:27:15.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:27:15.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 71.39318 Y = 39.78827===================
17-02-28 20:27:15.317 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:27:15.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:15.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:27:15.318 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:15.318 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:27:15.318 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:27:15.318 -08 000000042 INF: Transformed XStagePosition from 72.50118 mm to 72.4777225553989 mm.
17-02-28 20:27:15.330 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5803478014432 mm.
17-02-28 20:27:15.330 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3803478014432 mm.
17-02-28 20:27:15.330 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4710978014432 mm.
17-02-28 20:27:15.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:27:15.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:15.333 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -100.8 um, section = B_1
17-02-28 20:27:15.335 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:15.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:15.337 -08 000000066 INF: ===================MoveEmissionFilters===================
17-02-28 20:27:15.339 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:27:15.340 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:15.340 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:15.341 -08 000000032 INF: ===================Move X,Y, Parallel===================
17-02-28 20:27:15.341 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:27:15.342 -08 000000069 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:27:15.342 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:15.342 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:15.362 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:15.364 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:15.365 -08 000000106 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:15.365 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:27:15.366 -08 000000106 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:15.368 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:15.370 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:15.372 -08 000000079 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:15.372 -08 000000079 INF: Y Motor: Moving to 64.5803 mm @25.000 mm/sec, started at 14.9324 mm
17-02-28 20:27:15.372 -08 000000079 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:15.372 -08 000000079 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:15.372 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:27:15.373 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:15.374 -08 000000055 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:27:15.374 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:15.375 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:15.375 -08 000000055 INF: ======================================
17-02-28 20:27:15.375 -08 000000102 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:27:15.375 -08 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:27:15.376 -08 000000095 INF: ======================================
17-02-28 20:27:15.378 -08 000000095 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:27:15.379 -08 000000055 INF: ===================Camera Arm TDI===================
17-02-28 20:27:15.379 -08 000000095 INF: ======================================
17-02-28 20:27:15.379 -08 000000029 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:27:15.380 -08 000000055 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:15.380 -08 000000029 INF: ======================================
17-02-28 20:27:15.381 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:15.381 -08 000000055 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:15.382 -08 000000073 INF: ======================================
17-02-28 20:27:15.383 -08 000000098 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:27:15.383 -08 000000106 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:15.384 -08 000000098 INF: ======================================
17-02-28 20:27:15.384 -08 000000089 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:27:15.385 -08 000000089 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:27:15.385 -08 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:27:15.385 -08 000000089 INF: ======================================
17-02-28 20:27:15.386 -08 000000037 INF: ======================================
17-02-28 20:27:15.387 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:15.387 -08 000000106 INF: ======================================
17-02-28 20:27:15.387 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":2,"Tile":2101,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF235","HCSMMF286","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.388 -08 000000083 INF: ======================================
17-02-28 20:27:15.393 -08 000000085 INF: ===================Move X Motor without settling===================
17-02-28 20:27:15.394 -08 000000085 INF: X Motor: Xmit PR VM\n
17-02-28 20:27:15.396 -08 000000071 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:27:15.397 -08 000000071 INF: ======================================
17-02-28 20:27:15.401 -08 000000033 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:15.402 -08 000000033 INF: ======================================
17-02-28 20:27:15.404 -08 000000066 INF: ======================================
17-02-28 20:27:15.443 -08 000000039 INF: FPGA: Recv ZSEL 
17-02-28 20:27:15.444 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:15.444 -08 000000102 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:27:15.445 -08 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:27:15.445 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:27:15.445 -08 000000079 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:15.445 -08 000000079 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:15.445 -08 000000085 INF: X Motor: Xmit PR VI\n
17-02-28 20:27:15.465 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":2,"Tile":2105,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF284","HCSMMF208","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.474 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":2,"Tile":2107,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF246","HCSMMF229","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.476 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":2,"Tile":2102,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF231","HCSMMF209","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.477 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":2,"Tile":2104,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF271","HCSMMF253","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.490 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":2,"Tile":2112,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF259","HCSMMF247","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.494 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":2,"Tile":2108,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF278","HCSMMF190","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.497 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":2,"Tile":2114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF262","HCSMMF196","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.506 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":2,"Tile":2113,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF276","HCSMMF261","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.506 -08 000000083 INF: FPGA: Recv TDIBB
17-02-28 20:27:15.507 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:15.508 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:27:15.508 -08 000000079 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:15.508 -08 000000085 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:27:15.508 -08 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:27:15.508 -08 000000085 INF: X Motor: Moving to 72.4777 mm @15.000 mm/sec, started at 71.3755 mm
17-02-28 20:27:15.508 -08 000000085 INF: X Motor: Xmit MA 5520\n
17-02-28 20:27:15.509 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:15.509 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":2,"Tile":2106,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF251","HCSMMF238","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.509 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:15.511 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":2,"Tile":2111,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF187","HCSMMF273","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.512 -08 000000102 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:27:15.513 -08 000000102 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:27:15.513 -08 000000102 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:27:15.518 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":2,"Tile":2109,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF264","HCSMMF245","HCSMMF225"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.521 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":2,"Tile":2103,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF203","HCSMMF279","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.523 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":2,"Tile":2110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF216","HCSMMF193","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.527 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":2,"Tile":2116,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF184","HCSMMF224","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.529 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":2,"Tile":2115,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF268","HCSMMF195","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.530 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":2,"Tile":2118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF285","HCSMMF244","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.532 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":2,"Tile":2122,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF194","HCSMMF214","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.533 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":2,"Tile":2117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF218","HCSMMF204","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.535 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":2,"Tile":2119,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF263","HCSMMF255","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.537 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":2,"Tile":2124,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF198","HCSMMF180","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.538 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":2,"Tile":2126,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF260","HCSMMF250","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.540 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":2,"Tile":2120,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF283","HCSMMF210","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.542 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":2,"Tile":2123,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF248","HCSMMF207","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.543 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":2,"Tile":2121,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF266","HCSMMF220","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.544 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":2,"Tile":2128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF232","HCSMMF281","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.545 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":2,"Tile":2127,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF213","HCSMMF237","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.547 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":2,"Tile":2125,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF258","HCSMMF183","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:15.550 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:15.556 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:27:15.565 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:15.565 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:15.567 -08 000000102 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:27:15.567 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:15.568 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:27:15.568 -08 000000079 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:15.568 -08 000000079 INF: Y Motor: Set target position to 5958035 encoder counts
17-02-28 20:27:15.568 -08 000000079 INF: Y Motor: Xmit s r0xca 5958035\r
17-02-28 20:27:15.569 -08 000000085 INF: X Motor: Recv MA 5520\r\n>
17-02-28 20:27:15.569 -08 000000085 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:27:15.569 -08 000000102 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:27:15.569 -08 000000102 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:27:15.569 -08 000000102 INF: Z Motor: Arming to move to -0.0608 mm
17-02-28 20:27:15.569 -08 000000102 INF: FPGA: Xmit ZYT 6438035 4\n
17-02-28 20:27:15.629 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:27:15.629 -08 000000079 INF: Y Motor: Start the move command
17-02-28 20:27:15.629 -08 000000079 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:15.629 -08 000000091 INF: FPGA: Recv ZYT 
17-02-28 20:27:15.630 -08 000000102 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1493237 enc / 14.932 mm / ) = 6438035 enc / 64.380 mm
17-02-28 20:27:15.630 -08 000000102 INF: FPGA: Xmit ZARM 15944\n
17-02-28 20:27:15.665 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:15.665 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:27:15.690 -08 000000071 INF: FPGA: Recv ZARM
17-02-28 20:27:15.690 -08 000000102 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.0997 ms
17-02-28 20:27:15.690 -08 000000102 INF: Z Motor: ArmAbsStepped took 120.6917 ms
17-02-28 20:27:15.690 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:15.691 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:27:15.691 -08 000000079 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:27:15.691 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:15.691 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:27:15.693 -08 000000102 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:27:15.693 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:27:15.695 -08 000000102 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:27:15.695 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:27:15.696 -08 000000102 INF: ======================================
17-02-28 20:27:15.701 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:15.706 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:27:15.790 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:15.795 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:27:15.815 -08 000000079 INF: Y Motor: Unshifted Position: 1075186
17-02-28 20:27:15.865 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:15.973 -08 000000055 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:15.973 -08 000000055 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:15.973 -08 000000055 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:15.987 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:15.988 -08 000000055 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:15.990 -08 000000055 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:15.992 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:15.993 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:27:16.101 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:16.128 -08 000000079 INF: Y Motor: Unshifted Position: 1783224
17-02-28 20:27:16.178 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:16.190 -08 000000085 INF: X Motor: Xmit PR ER\n
17-02-28 20:27:16.252 -08 000000085 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:27:16.252 -08 000000085 INF: X Motor: Moved to 72.4766 after 683 ms
17-02-28 20:27:16.252 -08 000000085 INF: ======================================
17-02-28 20:27:16.303 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:16.390 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:27:16.442 -08 000000079 INF: Y Motor: Unshifted Position: 2558257
17-02-28 20:27:16.492 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:16.584 -08 000000055 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:16.585 -08 000000055 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:16.585 -08 000000055 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:16.600 -08 000000055 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:16.602 -08 000000055 INF: ===================Camera Arm TDI===================
17-02-28 20:27:16.603 -08 000000055 INF: ======================================
17-02-28 20:27:16.604 -08 000000069 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:16.605 -08 000000069 INF: ======================================
17-02-28 20:27:16.618 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:16.752 -08 000000079 INF: Y Motor: Unshifted Position: 3341530
17-02-28 20:27:16.802 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:16.929 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:17.065 -08 000000079 INF: Y Motor: Unshifted Position: 4124106
17-02-28 20:27:17.115 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:17.239 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:17.378 -08 000000079 INF: Y Motor: Unshifted Position: 4899869
17-02-28 20:27:17.428 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:17.555 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:17.689 -08 000000079 INF: Y Motor: Unshifted Position: 5681104
17-02-28 20:27:17.739 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:17.865 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:18.002 -08 000000079 INF: Y Motor: Unshifted Position: 5958037
17-02-28 20:27:18.002 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:18.002 -08 000000079 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:18.064 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:27:18.064 -08 000000079 INF: Y Motor: Moved to 64.5804 after 2372 ms
17-02-28 20:27:18.064 -08 000000079 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:18.126 -08 000000079 INF: Y Motor: Recv v 4096\r
17-02-28 20:27:18.126 -08 000000079 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:18.126 -08 000000079 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:18.190 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:27:18.190 -08 000000079 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:18.190 -08 000000079 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:18.250 -08 000000079 INF: Y Motor: Recv v 402653184\r
17-02-28 20:27:18.250 -08 000000079 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:27:18.250 -08 000000079 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:18.250 -08 000000079 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:18.312 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:27:18.312 -08 000000079 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:18.312 -08 000000079 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:18.312 -08 000000079 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:18.374 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:27:18.374 -08 000000079 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:18.374 -08 000000079 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:18.437 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:27:18.437 -08 000000079 INF: ======================================
17-02-28 20:27:18.438 -08 000000032 INF: ===================Move X,Y===================
17-02-28 20:27:18.440 -08 000000032 INF: ======================================
17-02-28 20:27:18.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:18.442 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:18.443 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:27:18.443 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:27:18.501 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:27:18.501 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:27:18.561 -08 000000079 INF: FPGA: Recv ZFREQCL
17-02-28 20:27:18.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:27:18.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:18.562 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:18.623 -08 000000039 INF: FPGA: Recv TDIYERD 6458037
17-02-28 20:27:18.623 -08 000000042 INF: Before scan, Y encoder from FPGA = 6458037 counts (64.580 mm)
17-02-28 20:27:18.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:18.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:18.625 -08 000000108 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:18.625 -08 000000055 INF: ===================Set YMotor gains for scans===================
17-02-28 20:27:18.625 -08 000000055 INF: ======================================
17-02-28 20:27:18.625 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:18.626 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:27:18.626 -08 000000108 INF: FPGA: Xmit TDIYPOS 6347110\n
17-02-28 20:27:18.688 -08 000000106 INF: FPGA: Recv TDIYPOS
17-02-28 20:27:18.689 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:18.690 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:27:18.691 -08 000000108 INF: FPGA: Xmit TDIYARM3 139264 6438035 1 1\n
17-02-28 20:27:18.747 -08 000000071 INF: FPGA: Recv TDIYARM3
17-02-28 20:27:18.747 -08 000000108 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:18.749 -08 000000108 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:18.750 -08 000000108 INF: ======================================
17-02-28 20:27:18.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:18.751 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:18.752 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:18.752 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:18.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:18.753 -08 000000080 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:27:18.753 -08 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:27:18.754 -08 000000080 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:27:18.754 -08 000000080 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:27:18.754 -08 000000080 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:27:18.754 -08 000000089 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:27:18.754 -08 000000089 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:27:18.754 -08 000000089 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:27:18.754 -08 000000080 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:27:18.755 -08 000000089 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:27:19.122 -08 000000078 INF: FPGA: Recv EX2MV
17-02-28 20:27:19.122 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:27:19.122 -08 000000080 INF: Excitation Filter 2: Moved -107 steps in 368.2756 ms
17-02-28 20:27:19.122 -08 000000089 INF: Excitation Filter 1: Moved -107 steps in 368.1856 ms
17-02-28 20:27:19.122 -08 000000080 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.5038 ms
17-02-28 20:27:19.122 -08 000000080 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.5843 ms
17-02-28 20:27:19.122 -08 000000089 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.3867 ms
17-02-28 20:27:19.122 -08 000000089 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.5615 ms
17-02-28 20:27:19.123 -08 000000080 INF: ======================================
17-02-28 20:27:19.123 -08 000000089 INF: ======================================
17-02-28 20:27:19.124 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:19.125 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:19.126 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:27:19.126 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:19.126 -08 000000100 INF: ===================FPGA Z Wait===================
17-02-28 20:27:19.126 -08 000000071 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:19.126 -08 000000100 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:27:19.126 -08 000000102 INF: ===================Camera TDI, Parallel===================
17-02-28 20:27:19.126 -08 000000106 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:27:19.127 -08 000000071 INF: Y Motor: Moving to 14.9320 mm @6.500 mm/sec, started at 64.5804 mm
17-02-28 20:27:19.127 -08 000000071 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:19.127 -08 000000071 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:19.127 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:27:19.127 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:27:19.128 -08 000000106 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:27:19.129 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:19.129 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:19.129 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:19.130 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:19.186 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:27:19.186 -08 000000071 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:19.186 -08 000000071 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:19.248 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:27:19.248 -08 000000071 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:19.279 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:19.279 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:19.280 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:19.280 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:19.310 -08 000000071 INF: Y Motor: Recv v 0\r
17-02-28 20:27:19.310 -08 000000071 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:19.310 -08 000000071 INF: Y Motor: Set target position to 993201 encoder counts
17-02-28 20:27:19.310 -08 000000071 INF: Y Motor: Xmit s r0xca 993201\r
17-02-28 20:27:19.372 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:27:19.372 -08 000000071 INF: Y Motor: Start the move command
17-02-28 20:27:19.372 -08 000000071 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:19.429 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:19.429 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:19.430 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:19.430 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:19.437 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:27:19.437 -08 000000071 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:27:19.437 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:19.497 -08 000000070 INF: FPGA: Recv ZWAIT 
17-02-28 20:27:19.498 -08 000000100 INF: ======================================
17-02-28 20:27:19.561 -08 000000071 INF: Y Motor: Unshifted Position: 5894452
17-02-28 20:27:19.579 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:19.579 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:19.579 -08 000000077 INF: ===================Camera #0 Frame #5===================
17-02-28 20:27:19.580 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:19.580 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:19.580 -08 000000105 INF: ===================Camera #2 Frame #5===================
17-02-28 20:27:19.611 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:19.735 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:19.744 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:27:19.744 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:27:19.744 -08 000000077 INF: ===================Camera #0 Frame #11===================
17-02-28 20:27:19.750 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:27:19.750 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:27:19.751 -08 000000105 INF: ===================Camera #2 Frame #11===================
17-02-28 20:27:19.874 -08 000000071 INF: Y Motor: Unshifted Position: 5691432
17-02-28 20:27:19.913 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:19.913 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:19.913 -08 000000077 INF: ===================Camera #0 Frame #17===================
17-02-28 20:27:19.919 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:19.919 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:19.919 -08 000000105 INF: ===================Camera #2 Frame #17===================
17-02-28 20:27:19.924 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.047 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.088 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:27:20.088 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:27:20.088 -08 000000105 INF: ===================Camera #2 Frame #23===================
17-02-28 20:27:20.091 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:27:20.091 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:27:20.091 -08 000000077 INF: ===================Camera #0 Frame #23===================
17-02-28 20:27:20.186 -08 000000071 INF: Y Motor: Unshifted Position: 5489290
17-02-28 20:27:20.236 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.266 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:27:20.266 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:27:20.266 -08 000000105 INF: ===================Camera #2 Frame #30===================
17-02-28 20:27:20.267 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:27:20.267 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:27:20.267 -08 000000077 INF: ===================Camera #0 Frame #30===================
17-02-28 20:27:20.359 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.438 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:27:20.438 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:27:20.438 -08 000000105 INF: ===================Camera #2 Frame #36===================
17-02-28 20:27:20.445 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:27:20.445 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:27:20.445 -08 000000077 INF: ===================Camera #0 Frame #36===================
17-02-28 20:27:20.498 -08 000000071 INF: Y Motor: Unshifted Position: 5286269
17-02-28 20:27:20.548 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.612 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:27:20.612 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:27:20.612 -08 000000105 INF: ===================Camera #2 Frame #43===================
17-02-28 20:27:20.621 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:27:20.621 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:27:20.621 -08 000000077 INF: ===================Camera #0 Frame #43===================
17-02-28 20:27:20.671 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.784 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:27:20.784 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:27:20.784 -08 000000105 INF: ===================Camera #2 Frame #49===================
17-02-28 20:27:20.803 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:27:20.803 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:27:20.803 -08 000000077 INF: ===================Camera #0 Frame #50===================
17-02-28 20:27:20.808 -08 000000071 INF: Y Motor: Unshifted Position: 5083462
17-02-28 20:27:20.858 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:20.962 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:27:20.962 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:27:20.962 -08 000000105 INF: ===================Camera #2 Frame #56===================
17-02-28 20:27:20.974 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:27:20.974 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:27:20.974 -08 000000077 INF: ===================Camera #0 Frame #56===================
17-02-28 20:27:20.984 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:21.120 -08 000000071 INF: Y Motor: Unshifted Position: 4879795
17-02-28 20:27:21.144 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:27:21.144 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:27:21.144 -08 000000105 INF: ===================Camera #2 Frame #62===================
17-02-28 20:27:21.150 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:27:21.150 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:27:21.150 -08 000000077 INF: ===================Camera #0 Frame #62===================
17-02-28 20:27:21.170 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:21.296 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:21.314 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:27:21.314 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:27:21.314 -08 000000105 INF: ===================Camera #2 Frame #68===================
17-02-28 20:27:21.328 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:27:21.328 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:27:21.328 -08 000000077 INF: ===================Camera #0 Frame #69===================
17-02-28 20:27:21.432 -08 000000071 INF: Y Motor: Unshifted Position: 4676998
17-02-28 20:27:21.482 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:21.489 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:27:21.489 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:27:21.489 -08 000000105 INF: ===================Camera #2 Frame #75===================
17-02-28 20:27:21.501 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:27:21.501 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:27:21.501 -08 000000077 INF: ===================Camera #0 Frame #75===================
17-02-28 20:27:21.608 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:21.669 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:27:21.669 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:27:21.669 -08 000000105 INF: ===================Camera #2 Frame #82===================
17-02-28 20:27:21.678 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:27:21.678 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:27:21.678 -08 000000077 INF: ===================Camera #0 Frame #82===================
17-02-28 20:27:21.744 -08 000000071 INF: Y Motor: Unshifted Position: 4473970
17-02-28 20:27:21.794 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:21.851 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:27:21.851 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:27:21.851 -08 000000077 INF: ===================Camera #0 Frame #88===================
17-02-28 20:27:21.852 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:27:21.852 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:27:21.852 -08 000000105 INF: ===================Camera #2 Frame #88===================
17-02-28 20:27:21.918 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.020 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:27:22.020 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:27:22.020 -08 000000077 INF: ===================Camera #0 Frame #94===================
17-02-28 20:27:22.031 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:27:22.031 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:27:22.031 -08 000000105 INF: ===================Camera #2 Frame #95===================
17-02-28 20:27:22.057 -08 000000071 INF: Y Motor: Unshifted Position: 4272472
17-02-28 20:27:22.107 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.188 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:27:22.188 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:27:22.188 -08 000000077 INF: ===================Camera #0 Frame #101===================
17-02-28 20:27:22.203 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:27:22.203 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:27:22.203 -08 000000105 INF: ===================Camera #2 Frame #101===================
17-02-28 20:27:22.230 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.360 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:27:22.360 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:27:22.360 -08 000000077 INF: ===================Camera #0 Frame #107===================
17-02-28 20:27:22.369 -08 000000071 INF: Y Motor: Unshifted Position: 4069451
17-02-28 20:27:22.373 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:27:22.373 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:27:22.373 -08 000000105 INF: ===================Camera #2 Frame #107===================
17-02-28 20:27:22.419 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.534 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:27:22.534 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:27:22.534 -08 000000077 INF: ===================Camera #0 Frame #113===================
17-02-28 20:27:22.542 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.542 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:27:22.542 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:27:22.542 -08 000000105 INF: ===================Camera #2 Frame #114===================
17-02-28 20:27:22.681 -08 000000071 INF: Y Motor: Unshifted Position: 3865787
17-02-28 20:27:22.702 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:27:22.702 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:27:22.702 -08 000000077 INF: ===================Camera #0 Frame #120===================
17-02-28 20:27:22.714 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:27:22.714 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:27:22.714 -08 000000105 INF: ===================Camera #2 Frame #120===================
17-02-28 20:27:22.731 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.854 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:22.874 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:27:22.874 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:27:22.874 -08 000000077 INF: ===================Camera #0 Frame #126===================
17-02-28 20:27:22.883 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:27:22.883 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:27:22.883 -08 000000105 INF: ===================Camera #2 Frame #126===================
17-02-28 20:27:22.991 -08 000000071 INF: Y Motor: Unshifted Position: 3662986
17-02-28 20:27:23.041 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:23.043 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:27:23.043 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:27:23.043 -08 000000077 INF: ===================Camera #0 Frame #132===================
17-02-28 20:27:23.053 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:27:23.053 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:27:23.053 -08 000000105 INF: ===================Camera #2 Frame #132===================
17-02-28 20:27:23.169 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:23.211 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:27:23.211 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:27:23.211 -08 000000077 INF: ===================Camera #0 Frame #138===================
17-02-28 20:27:23.222 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:27:23.222 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:27:23.222 -08 000000105 INF: ===================Camera #2 Frame #139===================
17-02-28 20:27:23.303 -08 000000071 INF: Y Motor: Unshifted Position: 3460192
17-02-28 20:27:23.353 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:23.379 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:27:23.379 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:27:23.379 -08 000000077 INF: ===================Camera #0 Frame #145===================
17-02-28 20:27:23.394 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:27:23.394 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:27:23.394 -08 000000105 INF: ===================Camera #2 Frame #145===================
17-02-28 20:27:23.479 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:23.551 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:27:23.551 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:27:23.551 -08 000000077 INF: ===================Camera #0 Frame #151===================
17-02-28 20:27:23.563 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:27:23.563 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:27:23.563 -08 000000105 INF: ===================Camera #2 Frame #151===================
17-02-28 20:27:23.615 -08 000000071 INF: Y Motor: Unshifted Position: 3255872
17-02-28 20:27:23.665 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:23.719 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:27:23.719 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:27:23.719 -08 000000077 INF: ===================Camera #0 Frame #157===================
17-02-28 20:27:23.732 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:27:23.732 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:27:23.732 -08 000000105 INF: ===================Camera #2 Frame #157===================
17-02-28 20:27:23.791 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:23.888 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:27:23.888 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:27:23.888 -08 000000077 INF: ===================Camera #0 Frame #163===================
17-02-28 20:27:23.903 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:27:23.903 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:27:23.903 -08 000000105 INF: ===================Camera #2 Frame #164===================
17-02-28 20:27:23.929 -08 000000071 INF: Y Motor: Unshifted Position: 3054811
17-02-28 20:27:23.979 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.056 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:27:24.056 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:27:24.056 -08 000000077 INF: ===================Camera #0 Frame #169===================
17-02-28 20:27:24.075 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:27:24.075 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:27:24.075 -08 000000105 INF: ===================Camera #2 Frame #170===================
17-02-28 20:27:24.102 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.224 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:27:24.224 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:27:24.224 -08 000000077 INF: ===================Camera #0 Frame #176===================
17-02-28 20:27:24.241 -08 000000071 INF: Y Motor: Unshifted Position: 2852017
17-02-28 20:27:24.244 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:27:24.244 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:27:24.244 -08 000000105 INF: ===================Camera #2 Frame #176===================
17-02-28 20:27:24.291 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.395 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:27:24.395 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:27:24.396 -08 000000077 INF: ===================Camera #0 Frame #182===================
17-02-28 20:27:24.413 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:27:24.413 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:27:24.413 -08 000000105 INF: ===================Camera #2 Frame #183===================
17-02-28 20:27:24.414 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.553 -08 000000071 INF: Y Motor: Unshifted Position: 2649211
17-02-28 20:27:24.564 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:27:24.564 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:27:24.564 -08 000000077 INF: ===================Camera #0 Frame #188===================
17-02-28 20:27:24.585 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:27:24.585 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:27:24.585 -08 000000105 INF: ===================Camera #2 Frame #189===================
17-02-28 20:27:24.603 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.726 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.732 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:27:24.732 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:27:24.732 -08 000000077 INF: ===================Camera #0 Frame #194===================
17-02-28 20:27:24.753 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:27:24.753 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:27:24.753 -08 000000105 INF: ===================Camera #2 Frame #195===================
17-02-28 20:27:24.863 -08 000000071 INF: Y Motor: Unshifted Position: 2446203
17-02-28 20:27:24.900 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:27:24.900 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:27:24.900 -08 000000077 INF: ===================Camera #0 Frame #201===================
17-02-28 20:27:24.913 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:24.922 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:27:24.922 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:27:24.922 -08 000000105 INF: ===================Camera #2 Frame #201===================
17-02-28 20:27:25.039 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:25.071 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:27:25.071 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:27:25.071 -08 000000077 INF: ===================Camera #0 Frame #207===================
17-02-28 20:27:25.091 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:27:25.091 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:27:25.091 -08 000000105 INF: ===================Camera #2 Frame #208===================
17-02-28 20:27:25.177 -08 000000071 INF: Y Motor: Unshifted Position: 2242537
17-02-28 20:27:25.227 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:25.241 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:27:25.241 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:27:25.241 -08 000000077 INF: ===================Camera #0 Frame #213===================
17-02-28 20:27:25.265 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:27:25.265 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:27:25.265 -08 000000105 INF: ===================Camera #2 Frame #214===================
17-02-28 20:27:25.351 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:25.411 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:27:25.411 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:27:25.411 -08 000000077 INF: ===================Camera #0 Frame #219===================
17-02-28 20:27:25.436 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:27:25.436 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:27:25.436 -08 000000105 INF: ===================Camera #2 Frame #220===================
17-02-28 20:27:25.487 -08 000000071 INF: Y Motor: Unshifted Position: 2039736
17-02-28 20:27:25.537 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:25.581 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:27:25.581 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:27:25.581 -08 000000077 INF: ===================Camera #0 Frame #226===================
17-02-28 20:27:25.607 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:27:25.607 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:27:25.607 -08 000000105 INF: ===================Camera #2 Frame #227===================
17-02-28 20:27:25.663 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:25.754 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:27:25.754 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:27:25.754 -08 000000077 INF: ===================Camera #0 Frame #232===================
17-02-28 20:27:25.781 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:27:25.781 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:27:25.781 -08 000000105 INF: ===================Camera #2 Frame #233===================
17-02-28 20:27:25.799 -08 000000071 INF: Y Motor: Unshifted Position: 1836718
17-02-28 20:27:25.849 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:25.924 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:27:25.924 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:27:25.924 -08 000000077 INF: ===================Camera #0 Frame #238===================
17-02-28 20:27:25.951 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:27:25.951 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:27:25.951 -08 000000105 INF: ===================Camera #2 Frame #239===================
17-02-28 20:27:25.974 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.094 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:27:26.094 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:27:26.094 -08 000000077 INF: ===================Camera #0 Frame #244===================
17-02-28 20:27:26.113 -08 000000071 INF: Y Motor: Unshifted Position: 1634566
17-02-28 20:27:26.122 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:27:26.122 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:27:26.122 -08 000000105 INF: ===================Camera #2 Frame #245===================
17-02-28 20:27:26.163 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.264 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:27:26.264 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:27:26.264 -08 000000077 INF: ===================Camera #0 Frame #251===================
17-02-28 20:27:26.286 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.293 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:27:26.293 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:27:26.293 -08 000000105 INF: ===================Camera #2 Frame #252===================
17-02-28 20:27:26.426 -08 000000071 INF: Y Motor: Unshifted Position: 1431544
17-02-28 20:27:26.439 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:27:26.439 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:27:26.439 -08 000000077 INF: ===================Camera #0 Frame #257===================
17-02-28 20:27:26.469 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:27:26.469 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:27:26.469 -08 000000105 INF: ===================Camera #2 Frame #258===================
17-02-28 20:27:26.476 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.601 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.609 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:27:26.609 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:27:26.609 -08 000000077 INF: ===================Camera #0 Frame #263===================
17-02-28 20:27:26.640 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:27:26.640 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:27:26.640 -08 000000105 INF: ===================Camera #2 Frame #265===================
17-02-28 20:27:26.738 -08 000000071 INF: Y Motor: Unshifted Position: 1228728
17-02-28 20:27:26.779 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:27:26.779 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:27:26.779 -08 000000077 INF: ===================Camera #0 Frame #270===================
17-02-28 20:27:26.788 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.813 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:27:26.813 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:27:26.813 -08 000000105 INF: ===================Camera #2 Frame #271===================
17-02-28 20:27:26.846 -08 000000086 INF: RunCopyService queue size at 2/28/2017 8:27:26 PM is 2
17-02-28 20:27:26.861 -08 000000030 INF: FPGA: Recv TDIYWAIT
17-02-28 20:27:26.869 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:26.870 -08 000000106 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:27:26.871 -08 000000091 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:27:26.871 -08 000000108 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:27:26.871 -08 000000091 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:27:26.871 -08 000000091 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:27:26.871 -08 000000091 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:27:26.871 -08 000000091 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:27:26.871 -08 000000108 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:27:26.871 -08 000000108 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:27:26.871 -08 000000108 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:27:26.874 -08 000000108 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:27:26.913 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:26.953 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:27:26.953 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:27:26.953 -08 000000077 INF: ===================Camera #0 Frame #272===================
17-02-28 20:27:26.959 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:27:26.960 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:27.048 -08 000000071 INF: Y Motor: Unshifted Position: 1025073
17-02-28 20:27:27.093 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:27:27.093 -08 000000105 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:27:27.093 -08 000000105 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:27:27.093 -08 000000105 INF: ===================Camera #2 Frame #272===================
17-02-28 20:27:27.093 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:27:27.097 -08 000000105 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:27:27.097 -08 000000105 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:27.098 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:27.125 -08 000000077 INF: ======================================
17-02-28 20:27:27.235 -08 000000071 INF: Y Motor: Unshifted Position: 993201
17-02-28 20:27:27.235 -08 000000071 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:27.235 -08 000000071 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:27.263 -08 000000105 INF: Camera #2 ReleaseBuffer
17-02-28 20:27:27.263 -08 000000105 INF: ===================Camera TDI===================
17-02-28 20:27:27.297 -08 000000085 INF: FPGA: Recv EX1MV
17-02-28 20:27:27.297 -08 000000085 INF: FPGA: Recv EX2MV
17-02-28 20:27:27.297 -08 000000108 INF: Excitation Filter 2: Moved 107 steps in 425.3382 ms
17-02-28 20:27:27.297 -08 000000091 INF: Excitation Filter 1: Moved 107 steps in 425.5819 ms
17-02-28 20:27:27.297 -08 000000108 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 425.4516 ms
17-02-28 20:27:27.297 -08 000000108 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 425.5933 ms
17-02-28 20:27:27.297 -08 000000091 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 425.6731 ms
17-02-28 20:27:27.297 -08 000000091 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 425.8404 ms
17-02-28 20:27:27.297 -08 000000105 INF: ======================================
17-02-28 20:27:27.297 -08 000000091 INF: ======================================
17-02-28 20:27:27.298 -08 000000108 INF: ======================================
17-02-28 20:27:27.299 -08 000000071 INF: Y Motor: Recv v 0\r
17-02-28 20:27:27.299 -08 000000071 INF: Y Motor: Moved to 14.9320 after 7861 ms
17-02-28 20:27:27.299 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:27:27.299 -08 000000071 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:27.299 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:27.300 -08 000000102 INF: ======================================
17-02-28 20:27:27.300 -08 000000106 INF: ======================================
17-02-28 20:27:27.360 -08 000000071 INF: Y Motor: Recv v 4097\r
17-02-28 20:27:27.360 -08 000000071 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:27.360 -08 000000071 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:27.424 -08 000000071 INF: Y Motor: Recv v 0\r
17-02-28 20:27:27.424 -08 000000071 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:27.424 -08 000000071 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:27.486 -08 000000071 INF: Y Motor: Recv v 134217728\r
17-02-28 20:27:27.486 -08 000000071 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:27:27.486 -08 000000071 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:27.486 -08 000000071 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:27.547 -08 000000071 INF: Y Motor: Recv v 0\r
17-02-28 20:27:27.547 -08 000000071 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:27.547 -08 000000071 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:27.547 -08 000000071 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:27.611 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:27:27.611 -08 000000071 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:27.611 -08 000000071 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:27.672 -08 000000071 INF: Y Motor: Recv ok\r
17-02-28 20:27:27.672 -08 000000071 INF: ======================================
17-02-28 20:27:27.673 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:27.674 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:27.675 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:27.675 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:27:27.734 -08 000000068 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:27:27.734 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:27.796 -08 000000102 INF: FPGA: Recv TDIYERD 1493202
17-02-28 20:27:27.796 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:27:27.857 -08 000000044 INF: FPGA: Recv ZADCR 20669
17-02-28 20:27:27.857 -08 000000042 INF: At scan end Y pos = 14.932 and Z pos = -0.079. Y moved -48.539 mm
17-02-28 20:27:27.857 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:27:27.920 -08 000000077 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:27:27.920 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:27:27.920 -08 000000042 INF: TDIScan finished after 12600.2093 ms
17-02-28 20:27:27.920 -08 000000042 INF: Image[0]: Y should trigger at 63.471 mm, 2nd row was at 64.380 mm (error = 0.909 mm)
17-02-28 20:27:27.920 -08 000000042 INF: Image[2]: Y should trigger at 63.471 mm, 2nd row was at 64.380 mm (error = 0.909 mm)
17-02-28 20:27:27.923 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:27.960 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.597 um
17-02-28 20:27:27.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:27.962 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:27:27.984 -08 000000068 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:27:27.984 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:27.985 -08 000000032 INF: ===================Dither Clean Up Command===================
17-02-28 20:27:27.985 -08 000000071 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:27:27.985 -08 000000029 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:27:27.985 -08 000000050 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:27:27.986 -08 000000050 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:27:27.986 -08 000000071 INF: ======================================
17-02-28 20:27:27.986 -08 000000050 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:27:27.986 -08 000000029 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:27:27.986 -08 000000029 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:27:27.986 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:27:27.986 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:27.987 -08 000000090 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:27:27.989 -08 000000058 INF: ===================LFT:Extracting coords===================
17-02-28 20:27:28.015 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:28.016 -08 000000058 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:27:28.017 -08 000000091 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.017 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.017 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.017 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.017 -08 000000091 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:28.017 -08 000000028 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:28.017 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:28.017 -08 000000100 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:28.045 -08 000000033 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:28.045 -08 000000033 INF: FPGA: Recv ZSEL 
17-02-28 20:27:28.045 -08 000000090 INF: FPGA: Xmit ZDACW 26429\n
17-02-28 20:27:28.045 -08 000000050 INF: ======================================
17-02-28 20:27:28.047 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:27:28.047 -08 000000029 INF: ======================================
17-02-28 20:27:28.091 -08 000000091 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:28.091 -08 000000028 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:28.091 -08 000000069 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:28.091 -08 000000100 INF: FC:B, C:3,L:2, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:28.107 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:27:28.107 -08 000000090 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:27:28.108 -08 000000090 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:27:28.171 -08 000000039 INF: FPGA: Recv TDIBB
17-02-28 20:27:28.172 -08 000000090 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:27:28.173 -08 000000090 INF: ======================================
17-02-28 20:27:28.242 -08 000000091 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:27:28.242 -08 000000091 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0793441697555536 in the next cycle, cycle 4 FC:B, C:3,L:2,B
17-02-28 20:27:28.242 -08 000000069 INF: LFT found best fwhm score 2.000374 in 151 ms
17-02-28 20:27:28.242 -08 000000069 INF: LFT found good score at index 5453 with fwhm value 2.000374. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:2,B
17-02-28 20:27:28.243 -08 000000028 INF: LFT found best fwhm score 2.000022 in 152 ms
17-02-28 20:27:28.243 -08 000000091 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.243 -08 000000028 INF: LFT found good score at index 1541 with fwhm value 2.000022. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:2,B
17-02-28 20:27:28.243 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.243 -08 000000100 INF: LFT found best fwhm score 2.000049 in 152 ms
17-02-28 20:27:28.243 -08 000000100 INF: LFT found good score at index 5753 with fwhm value 2.000049. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:2,B
17-02-28 20:27:28.243 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.243 -08 000000091 INF: ======================================
17-02-28 20:27:28.243 -08 000000069 INF: ======================================
17-02-28 20:27:28.243 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:27:28.243 -08 000000028 INF: ======================================
17-02-28 20:27:28.243 -08 000000100 INF: ======================================
17-02-28 20:27:28.244 -08 000000058 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:28.245 -08 000000058 INF: LFT weighted average best Z for bottom surface is at -0.079mm FC:B, C:3,L:2,B
17-02-28 20:27:28.245 -08 000000058 INF: ======================================
17-02-28 20:27:28.246 -08 000000032 INF: ======================================
17-02-28 20:27:28.247 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:28.248 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:27:28.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:28.250 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:27:28.250 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:27:28.251 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:27:28.251 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:27:28.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:27:28.251 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 72.50118 Y = 39.78827===================
17-02-28 20:27:28.276 -08 000000042 INF: Waited 25 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:27:28.277 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:28.277 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:28.277 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:28.277 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:27:28.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 2===================
17-02-28 20:27:28.278 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:27:28.353 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":2,"Tile":2212,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF223","HCSMMF208","HCSMMF206","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.370 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.371 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.372 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:27:28.372 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:27:28.437 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:27:28.437 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.438 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:27:28.438 -08 000000042 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:27:28.438 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.445 -08 000000034 INF: ===================Move Tilt Motor 1===================
17-02-28 20:27:28.445 -08 000000034 INF: ======================================
17-02-28 20:27:28.446 -08 000000034 INF: ===================Move Tilt Motor 2===================
17-02-28 20:27:28.447 -08 000000034 INF: ======================================
17-02-28 20:27:28.448 -08 000000034 INF: ===================Move Tilt Motor 3===================
17-02-28 20:27:28.449 -08 000000034 INF: ======================================
17-02-28 20:27:28.450 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.541 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":2,"Tile":2202,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF183","HCSMMF182","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:28.543 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":2,"Tile":2201,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF202","HCSMMF213","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.549 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:27:28.552 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":2,"Tile":2208,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF247","HCSMMF267","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.554 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":2,"Tile":2204,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF219","HCSMMF215","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.556 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":2,"Tile":2205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF185","HCSMMF188","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.557 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":2,"Tile":2213,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF255","HCSMMF254","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.558 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:27:28.558 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:27:28.558 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:27:28.559 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":2,"Tile":2203,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF176","HCSMMF232","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:28.559 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:28.560 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":2,"Tile":2209,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF210","HCSMMF283","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.560 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":2,"Tile":2210,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF240","HCSMMF234","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.561 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":2,"Tile":2206,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF266","HCSMMF238","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.562 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":2,"Tile":2207,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF224","HCSMMF227","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.563 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:27:28.563 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:27:28.563 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:27:28.563 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":2,"Tile":2215,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF250","HCSMMF268","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.564 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":2,"Tile":2211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF233","HCSMMF201","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.565 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":2,"Tile":2217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF257","HCSMMF178","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.566 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":2,"Tile":2218,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF186","HCSMMF187","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.567 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":2,"Tile":2216,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF269","HCSMMF216","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.568 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":2,"Tile":2214,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF193","HCSMMF275","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.569 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":2,"Tile":2220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF200","HCSMMF242","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.570 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":2,"Tile":2222,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF180","HCSMMF243","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.571 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":2,"Tile":2228,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF245","HCSMMF177","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.572 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":2,"Tile":2221,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF239","HCSMMF189","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.573 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":2,"Tile":2219,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF192","HCSMMF203","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.574 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":2,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF218","HCSMMF191","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.575 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":2,"Tile":2223,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF181","HCSMMF256","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.576 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":2,"Tile":2226,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF222","HCSMMF190","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.577 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":2,"Tile":2224,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF286","HCSMMF280","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.578 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 2 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":2,"Tile":2227,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF231","HCSMMF225","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:28.581 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:28.587 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:27:28.591 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:28.592 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:28.592 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:27:28.592 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1008 mm
17-02-28 20:27:28.592 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:27:28.658 -08 000000080 INF: FPGA: Recv ZTRG 
17-02-28 20:27:28.658 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:27:28.665 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:28.666 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:27:28.703 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:28.708 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:27:28.716 -08 000000068 INF: FPGA: Recv ZYT 
17-02-28 20:27:28.716 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:27:28.716 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:27:28.781 -08 000000108 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:27:28.781 -08 000000108 INF: FPGA: Recv ZMV 
17-02-28 20:27:28.781 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.4022 ms
17-02-28 20:27:28.781 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:27:28.781 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:27:28.813 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:28.819 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:27:28.842 -08 000000091 INF: FPGA: Recv ZDACR 60292
17-02-28 20:27:28.843 -08 000000042 INF: Z Motor: MoveAndTrigger took 250.8378 ms w/comms
17-02-28 20:27:28.843 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:27:28.843 -08 000000042 INF: Z Motor: MoveAbsStepped took 251.0153 ms
17-02-28 20:27:28.843 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:28.844 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:27:28.852 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:27:28.852 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:27:28.852 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:27:28.852 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:27:28.852 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:27:28.899 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:28.904 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:27:28.905 -08 000000071 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:28.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:28.927 -08 000000042 INF: Transformed XStagePosition from 74.71564 mm to 74.7156372070313 mm.
17-02-28 20:27:28.936 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:27:28.936 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:27:28.936 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:27:28.938 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:28.938 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:27:28.938 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:28.938 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = C_1
17-02-28 20:27:28.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:28.939 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:28.940 -08 000000036 INF: ===================MoveEmissionFilters===================
17-02-28 20:27:28.940 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:27:28.941 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:28.941 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:28.941 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:28.941 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:28.942 -08 000000038 INF: ===================Move X,Y, Parallel===================
17-02-28 20:27:28.942 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:28.942 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:28.942 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:28.942 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:28.943 -08 000000050 INF: ===================Move X Motor without settling===================
17-02-28 20:27:28.943 -08 000000100 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:27:28.943 -08 000000074 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:28.943 -08 000000050 INF: X Motor: Xmit PR VM\n
17-02-28 20:27:28.943 -08 000000090 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:27:28.943 -08 000000056 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:27:28.943 -08 000000102 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:27:28.943 -08 000000070 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:27:28.943 -08 000000069 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:27:28.943 -08 000000100 INF: ======================================
17-02-28 20:27:28.943 -08 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:27:28.944 -08 000000090 INF: ======================================
17-02-28 20:27:28.944 -08 000000068 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:27:28.944 -08 000000102 INF: ======================================
17-02-28 20:27:28.944 -08 000000070 INF: ======================================
17-02-28 20:27:28.944 -08 000000068 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:27:28.944 -08 000000069 INF: ======================================
17-02-28 20:27:28.944 -08 000000068 INF: ======================================
17-02-28 20:27:28.945 -08 000000056 INF: ======================================
17-02-28 20:27:28.945 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:28.946 -08 000000074 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9320 mm
17-02-28 20:27:28.946 -08 000000077 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:28.946 -08 000000074 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:28.946 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:28.946 -08 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:28.947 -08 000000033 INF: ======================================
17-02-28 20:27:28.947 -08 000000091 INF: ======================================
17-02-28 20:27:28.947 -08 000000077 INF: ======================================
17-02-28 20:27:28.947 -08 000000034 INF: ======================================
17-02-28 20:27:28.948 -08 000000030 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:28.949 -08 000000030 INF: ======================================
17-02-28 20:27:28.950 -08 000000036 INF: ======================================
17-02-28 20:27:28.969 -08 000000050 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:27:28.969 -08 000000050 INF: X Motor: Xmit PR VI\n
17-02-28 20:27:29.006 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:29.029 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:27:29.029 -08 000000074 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:29.029 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:29.030 -08 000000050 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:27:29.030 -08 000000050 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:27:29.030 -08 000000050 INF: X Motor: Moving to 74.7156 mm @15.000 mm/sec, started at 72.4766 mm
17-02-28 20:27:29.030 -08 000000050 INF: X Motor: Xmit MA 6437\n
17-02-28 20:27:29.095 -08 000000050 INF: X Motor: Recv MA 6437\r\n>
17-02-28 20:27:29.095 -08 000000050 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:27:29.095 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:27:29.095 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:29.154 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:27:29.154 -08 000000074 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:29.154 -08 000000074 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:27:29.154 -08 000000074 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:27:29.216 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:27:29.216 -08 000000074 INF: Y Motor: Start the move command
17-02-28 20:27:29.216 -08 000000074 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:29.281 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:27:29.281 -08 000000074 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:27:29.281 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:29.284 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:27:29.405 -08 000000074 INF: Y Motor: Unshifted Position: 1079472
17-02-28 20:27:29.455 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:29.580 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:29.719 -08 000000050 INF: X Motor: Xmit PR ER\n
17-02-28 20:27:29.720 -08 000000074 INF: Y Motor: Unshifted Position: 1782369
17-02-28 20:27:29.770 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:29.778 -08 000000050 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:27:29.778 -08 000000050 INF: X Motor: Moved to 74.7153 after 683 ms
17-02-28 20:27:29.778 -08 000000050 INF: ======================================
17-02-28 20:27:29.890 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.031 -08 000000074 INF: Y Motor: Unshifted Position: 2563229
17-02-28 20:27:30.081 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.203 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.341 -08 000000074 INF: Y Motor: Unshifted Position: 3353156
17-02-28 20:27:30.391 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.515 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.655 -08 000000074 INF: Y Motor: Unshifted Position: 4124072
17-02-28 20:27:30.705 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.826 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:30.964 -08 000000074 INF: Y Motor: Unshifted Position: 4909019
17-02-28 20:27:31.014 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:31.138 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:31.278 -08 000000074 INF: Y Motor: Unshifted Position: 5689218
17-02-28 20:27:31.328 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:31.452 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:31.589 -08 000000074 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:27:31.589 -08 000000074 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:31.589 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:31.650 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:27:31.650 -08 000000074 INF: Y Motor: Moved to 64.5335 after 2369 ms
17-02-28 20:27:31.650 -08 000000074 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:31.712 -08 000000074 INF: Y Motor: Recv v 4096\r
17-02-28 20:27:31.712 -08 000000074 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:31.712 -08 000000074 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:31.777 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:27:31.777 -08 000000074 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:31.777 -08 000000074 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:31.839 -08 000000074 INF: Y Motor: Recv v 402653184\r
17-02-28 20:27:31.839 -08 000000074 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:27:31.839 -08 000000074 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:31.839 -08 000000074 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:31.901 -08 000000074 INF: Y Motor: Recv v 0\r
17-02-28 20:27:31.901 -08 000000074 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:31.901 -08 000000074 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:31.901 -08 000000074 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:31.962 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:27:31.962 -08 000000074 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:31.962 -08 000000074 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:32.024 -08 000000074 INF: Y Motor: Recv ok\r
17-02-28 20:27:32.024 -08 000000074 INF: ======================================
17-02-28 20:27:32.025 -08 000000038 INF: ===================Move X,Y===================
17-02-28 20:27:32.026 -08 000000038 INF: ======================================
17-02-28 20:27:32.027 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:32.028 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:32.028 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:27:32.028 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:27:32.089 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:27:32.089 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:27:32.149 -08 000000080 INF: FPGA: Recv ZFREQCL
17-02-28 20:27:32.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:27:32.149 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:32.150 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:32.212 -08 000000073 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:27:32.212 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:27:32.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:32.213 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:32.214 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:27:32.214 -08 000000032 INF: ===================Set YMotor gains for scans===================
17-02-28 20:27:32.215 -08 000000032 INF: ======================================
17-02-28 20:27:32.215 -08 000000074 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:27:32.215 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:27:32.216 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:27:32.217 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:27:32.217 -08 000000074 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:27:32.274 -08 000000050 INF: FPGA: Recv TDIYPOS
17-02-28 20:27:32.275 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:27:32.277 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:27:32.277 -08 000000074 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:27:32.336 -08 000000071 INF: FPGA: Recv TDIYARM2
17-02-28 20:27:32.336 -08 000000074 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:27:32.338 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:27:32.340 -08 000000074 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:27:32.341 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:27:32.343 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:27:32.344 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:27:32.345 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:32.718 -08 000000074 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:27:32.718 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:27:32.718 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:32.733 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:27:32.735 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:33.113 -08 000000074 INF: Camera #2 AttachBuffer (imageDataPtr = 53821247560 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:27:33.113 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:27:33.113 -08 000000074 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:33.128 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:27:33.130 -08 000000074 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:27:33.131 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:27:33.132 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:33.133 -08 000000074 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:27:33.133 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:33.135 -08 000000074 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:27:33.135 -08 000000074 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:27:33.135 -08 000000074 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:27:33.135 -08 000000074 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:27:33.145 -08 000000029 INF: FPGA: Recv ZYT 
17-02-28 20:27:33.145 -08 000000074 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:27:33.145 -08 000000074 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:27:33.210 -08 000000033 INF: FPGA: Recv ZARM
17-02-28 20:27:33.210 -08 000000074 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.3871 ms
17-02-28 20:27:33.210 -08 000000074 INF: Z Motor: ArmAbsStepped took 75.5241 ms
17-02-28 20:27:33.211 -08 000000074 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:33.212 -08 000000074 INF: ===================TDI Scan Setup===================
17-02-28 20:27:33.213 -08 000000074 INF: ======================================
17-02-28 20:27:33.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:33.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:33.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:33.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:33.218 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:33.219 -08 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:27:33.219 -08 000000029 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:27:33.219 -08 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:27:33.219 -08 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:27:33.219 -08 000000078 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:27:33.220 -08 000000029 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:27:33.220 -08 000000029 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:27:33.220 -08 000000029 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:27:33.220 -08 000000078 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:27:33.221 -08 000000029 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:27:33.582 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:27:33.582 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:27:33.582 -08 000000029 INF: Excitation Filter 1: Moved -107 steps in 362.3546 ms
17-02-28 20:27:33.582 -08 000000029 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 362.5268 ms
17-02-28 20:27:33.582 -08 000000029 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 362.6675 ms
17-02-28 20:27:33.582 -08 000000078 INF: Excitation Filter 2: Moved -107 steps in 362.5454 ms
17-02-28 20:27:33.582 -08 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 362.9727 ms
17-02-28 20:27:33.582 -08 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.073 ms
17-02-28 20:27:33.582 -08 000000029 INF: ======================================
17-02-28 20:27:33.583 -08 000000078 INF: ======================================
17-02-28 20:27:33.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:33.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:33.586 -08 000000108 INF: ===================Serial===================
17-02-28 20:27:33.586 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:27:33.586 -08 000000047 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:33.586 -08 000000047 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:27:33.587 -08 000000047 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:33.587 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:33.587 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:33.587 -08 000000108 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:27:33.587 -08 000000077 INF: ===================Camera TDI, Parallel===================
17-02-28 20:27:33.587 -08 000000108 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:27:33.588 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:27:33.588 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:27:33.588 -08 000000038 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:27:33.588 -08 000000038 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:27:33.589 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:33.589 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:33.589 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:33.589 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:33.649 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:27:33.649 -08 000000047 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:33.649 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:33.711 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:27:33.711 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:33.739 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:33.739 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:33.740 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:33.740 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:33.773 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:27:33.773 -08 000000047 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:33.773 -08 000000047 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:27:33.773 -08 000000047 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:27:33.835 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:27:33.835 -08 000000047 INF: Y Motor: Start the move command
17-02-28 20:27:33.835 -08 000000047 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:33.889 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:33.889 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:33.890 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:33.890 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:33.897 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:27:33.897 -08 000000047 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:27:33.897 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.021 -08 000000047 INF: Y Motor: Unshifted Position: 5935380
17-02-28 20:27:34.039 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:34.039 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:34.040 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:34.040 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:34.071 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.189 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:27:34.189 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:27:34.189 -08 000000073 INF: ===================Camera #0 Frame #1===================
17-02-28 20:27:34.190 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:27:34.190 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:27:34.190 -08 000000051 INF: ===================Camera #2 Frame #1===================
17-02-28 20:27:34.198 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.334 -08 000000047 INF: Y Motor: Unshifted Position: 5888382
17-02-28 20:27:34.344 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:27:34.344 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:27:34.344 -08 000000073 INF: ===================Camera #0 Frame #3===================
17-02-28 20:27:34.345 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:27:34.345 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:27:34.345 -08 000000051 INF: ===================Camera #2 Frame #3===================
17-02-28 20:27:34.384 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.500 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:27:34.500 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:27:34.500 -08 000000073 INF: ===================Camera #0 Frame #4===================
17-02-28 20:27:34.503 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:27:34.503 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:27:34.507 -08 000000051 INF: ===================Camera #2 Frame #4===================
17-02-28 20:27:34.508 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.647 -08 000000047 INF: Y Motor: Unshifted Position: 5841424
17-02-28 20:27:34.655 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:34.655 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:34.655 -08 000000073 INF: ===================Camera #0 Frame #5===================
17-02-28 20:27:34.662 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:34.662 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:34.662 -08 000000051 INF: ===================Camera #2 Frame #5===================
17-02-28 20:27:34.697 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.707 -08 000000034 INF: FPGA: Recv ZWAIT 
17-02-28 20:27:34.707 -08 000000034 INF: FPGA: Recv TDIYWAIT
17-02-28 20:27:34.707 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:34.707 -08 000000108 INF: ===================Serial===================
17-02-28 20:27:34.709 -08 000000038 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:27:34.710 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:27:34.710 -08 000000108 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:27:34.710 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:27:34.710 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:27:34.710 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:27:34.710 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:27:34.711 -08 000000028 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:27:34.711 -08 000000108 INF: ===================Serial===================
17-02-28 20:27:34.711 -08 000000028 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:27:34.711 -08 000000028 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:27:34.711 -08 000000028 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:27:34.712 -08 000000028 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:27:34.713 -08 000000108 INF: ======================================
17-02-28 20:27:34.810 -08 000000073 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:27:34.810 -08 000000073 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:27:34.810 -08 000000073 INF: ===================Camera #0 Frame #6===================
17-02-28 20:27:34.813 -08 000000073 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:27:34.814 -08 000000073 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:34.821 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:34.828 -08 000000051 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:27:34.828 -08 000000051 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:27:34.828 -08 000000051 INF: ===================Camera #2 Frame #6===================
17-02-28 20:27:34.832 -08 000000051 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:27:34.833 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:34.839 -08 000000073 INF: Camera #0 ReleaseBuffer
17-02-28 20:27:34.839 -08 000000073 INF: ===================Camera TDI===================
17-02-28 20:27:34.840 -08 000000073 INF: ======================================
17-02-28 20:27:34.864 -08 000000051 INF: Camera #2 ReleaseBuffer
17-02-28 20:27:34.864 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:27:34.865 -08 000000051 INF: ======================================
17-02-28 20:27:34.867 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:27:34.868 -08 000000077 INF: ======================================
17-02-28 20:27:34.957 -08 000000047 INF: Y Motor: Unshifted Position: 5797064
17-02-28 20:27:35.007 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:35.082 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:27:35.082 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:27:35.082 -08 000000028 INF: Excitation Filter 2: Moved 107 steps in 371.0064 ms
17-02-28 20:27:35.082 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 371.8211 ms
17-02-28 20:27:35.082 -08 000000028 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.2246 ms
17-02-28 20:27:35.082 -08 000000028 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.3524 ms
17-02-28 20:27:35.082 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.9854 ms
17-02-28 20:27:35.082 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.1944 ms
17-02-28 20:27:35.083 -08 000000028 INF: ======================================
17-02-28 20:27:35.084 -08 000000032 INF: ======================================
17-02-28 20:27:35.085 -08 000000038 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:35.086 -08 000000038 INF: ======================================
17-02-28 20:27:35.146 -08 000000047 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:27:35.146 -08 000000047 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:35.146 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:35.208 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:27:35.208 -08 000000047 INF: Y Motor: Moved to 62.9704 after 1310 ms
17-02-28 20:27:35.208 -08 000000047 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:35.270 -08 000000047 INF: Y Motor: Recv v 4097\r
17-02-28 20:27:35.270 -08 000000047 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:35.270 -08 000000047 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:35.332 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:27:35.332 -08 000000047 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:35.332 -08 000000047 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:35.394 -08 000000047 INF: Y Motor: Recv v 134217728\r
17-02-28 20:27:35.394 -08 000000047 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:27:35.394 -08 000000047 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:35.394 -08 000000047 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:35.456 -08 000000047 INF: Y Motor: Recv v 0\r
17-02-28 20:27:35.456 -08 000000047 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:35.456 -08 000000047 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:35.456 -08 000000047 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:35.521 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:27:35.521 -08 000000047 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:35.521 -08 000000047 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:35.583 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:27:35.583 -08 000000047 INF: ======================================
17-02-28 20:27:35.584 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:35.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:27:35.586 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:35.586 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:27:35.643 -08 000000099 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:27:35.643 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:35.705 -08 000000033 INF: FPGA: Recv TDIYERD 6297044
17-02-28 20:27:35.705 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:27:35.770 -08 000000077 INF: FPGA: Recv ZADCR 2421
17-02-28 20:27:35.770 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:27:35.771 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:27:35.829 -08 000000071 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:27:35.829 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:27:35.829 -08 000000042 INF: TDIScan finished after 6902.4064 ms
17-02-28 20:27:35.829 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:27:35.829 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:27:35.830 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:27:35.891 -08 000000105 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:27:35.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:35.892 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:35.893 -08 000000051 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:27:35.893 -08 000000033 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:27:35.894 -08 000000051 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:27:35.894 -08 000000051 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:27:35.894 -08 000000050 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:27:35.894 -08 000000033 INF: ======================================
17-02-28 20:27:35.894 -08 000000050 INF: ======================================
17-02-28 20:27:35.955 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:27:35.955 -08 000000051 INF: ======================================
17-02-28 20:27:35.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:35.957 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:35.958 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:27:36.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:36.023 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:27:36.072 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:36.073 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:27:36.136 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:36.136 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:27:36.180 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:27:36.181 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:36.181 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:36.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:27:36.189 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:36.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:27:36.190 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:27:36.877 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1, Selecting focus point===================
17-02-28 20:27:36.900 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0803214276661005Best Z position at top surface = -0.151991178483612Best Z position at top surface + compensator offset = -0.129291178483612 C:3,L:3,B
17-02-28 20:27:36.901 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.151991178483612
17-02-28 20:27:36.901 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.9383
17-02-28 20:27:36.901 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0803214276661005
17-02-28 20:27:36.901 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.5933
17-02-28 20:27:36.901 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0803214276661005.
17-02-28 20:27:36.901 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:37.035 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:27:37.035 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:27:37.077 -08 000000029 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:37.077 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Focus Point 1===================
17-02-28 20:27:37.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.079 -08 000000042 INF: Lane 3, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:27:37.079 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.080 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.081 -08 000000073 INF: ===================Move Tilt Motor 3===================
17-02-28 20:27:37.081 -08 000000050 INF: ===================Move Tilt Motor 2===================
17-02-28 20:27:37.081 -08 000000034 INF: ===================Move Tilt Motor 1===================
17-02-28 20:27:37.081 -08 000000050 INF: ======================================
17-02-28 20:27:37.081 -08 000000034 INF: ======================================
17-02-28 20:27:37.082 -08 000000073 INF: ======================================
17-02-28 20:27:37.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.084 -08 000000042 INF: ETF Best Z: -0.08032143 mm (21055 DAC)
17-02-28 20:27:37.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.085 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:27:37.085 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.086 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:37.092 -08 000000042 INF: Swath 1 position calculated to be: {X=74.15818, Y=39.78827} from estimated center X= 74.67699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:27:37.092 -08 000000042 INF: Swath 2 position calculated to be: {X=75.26618, Y=39.78827} from estimated center X= 74.67699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:27:37.494 -08 000000042 INF: Swath 0: Converted transform from (-46.3171, 4.412174) pixels to (-0.01587, 0.00138) mm.
17-02-28 20:27:37.500 -08 000000042 INF: Swath 1: Converted transform from (-71.799, 6.019035) pixels to (-0.02484, 0.00207) mm.
17-02-28 20:27:37.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:27:37.501 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:27:37.502 -08 000000042 INF: Transformed XStagePosition from 74.15818 mm to 74.142310237512 mm.
17-02-28 20:27:37.513 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5796578015443 mm.
17-02-28 20:27:37.513 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3796578015443 mm.
17-02-28 20:27:37.513 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4704078015443 mm.
17-02-28 20:27:37.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:37.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:27:37.516 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:37.516 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = C_1
17-02-28 20:27:37.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:37.525 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:37.525 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:27:37.525 -08 000000106 INF: ===================Move X,Y===================
17-02-28 20:27:37.526 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:37.526 -08 000000071 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:37.526 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:37.526 -08 000000100 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:37.526 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:27:37.526 -08 000000106 INF: ===================Move X,Y, Parallel===================
17-02-28 20:27:37.526 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:37.527 -08 000000080 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:27:37.527 -08 000000080 INF: Z Motor: Moving to -0.1003 mm, started at -0.0100 mm
17-02-28 20:27:37.527 -08 000000071 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:37.527 -08 000000080 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:27:37.527 -08 000000100 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:37.527 -08 000000073 INF: ===================Move X Motor without settling===================
17-02-28 20:27:37.527 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:37.527 -08 000000073 INF: X Motor: Xmit PR VM\n
17-02-28 20:27:37.527 -08 000000102 INF: Y Motor: Moving to 64.5797 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:27:37.527 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:37.527 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:37.528 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:37.528 -08 000000039 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:27:37.528 -08 000000032 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:27:37.528 -08 000000086 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:27:37.528 -08 000000069 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:27:37.528 -08 000000032 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:27:37.528 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:27:37.528 -08 000000069 INF: ======================================
17-02-28 20:27:37.528 -08 000000074 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:27:37.528 -08 000000039 INF: ======================================
17-02-28 20:27:37.529 -08 000000032 INF: ======================================
17-02-28 20:27:37.529 -08 000000074 INF: ======================================
17-02-28 20:27:37.529 -08 000000051 INF: ======================================
17-02-28 20:27:37.529 -08 000000086 INF: ======================================
17-02-28 20:27:37.530 -08 000000071 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:37.530 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:37.530 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:37.530 -08 000000100 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:37.531 -08 000000051 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:27:37.531 -08 000000105 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:27:37.531 -08 000000071 INF: ======================================
17-02-28 20:27:37.531 -08 000000105 INF: ======================================
17-02-28 20:27:37.531 -08 000000051 INF: ======================================
17-02-28 20:27:37.531 -08 000000050 INF: ======================================
17-02-28 20:27:37.532 -08 000000100 INF: ======================================
17-02-28 20:27:37.533 -08 000000036 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:37.534 -08 000000036 INF: ======================================
17-02-28 20:27:37.535 -08 000000087 INF: ======================================
17-02-28 20:27:37.545 -08 000000084 INF: FPGA: Recv ZTRG 
17-02-28 20:27:37.545 -08 000000080 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:27:37.610 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:27:37.610 -08 000000080 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:27:37.610 -08 000000080 INF: FPGA: Xmit ZMV 26298\n
17-02-28 20:27:37.612 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:37.612 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:37.612 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:37.612 -08 000000073 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:27:37.612 -08 000000073 INF: X Motor: Xmit PR VI\n
17-02-28 20:27:37.672 -08 000000076 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:27:37.672 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:27:37.674 -08 000000073 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:27:37.674 -08 000000073 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:27:37.674 -08 000000073 INF: X Motor: Moving to 74.1423 mm @15.000 mm/sec, started at 74.7153 mm
17-02-28 20:27:37.674 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:37.674 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:37.674 -08 000000073 INF: X Motor: Xmit MA 6202\n
17-02-28 20:27:37.734 -08 000000051 INF: FPGA: Recv ZMV 
17-02-28 20:27:37.734 -08 000000080 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.0459 ms
17-02-28 20:27:37.734 -08 000000080 INF: FPGA: Xmit ZDACR\n
17-02-28 20:27:37.736 -08 000000073 INF: X Motor: Recv MA 6202\r\n>
17-02-28 20:27:37.736 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:37.736 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:37.736 -08 000000073 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:27:37.736 -08 000000102 INF: Y Motor: Set target position to 5957966 encoder counts
17-02-28 20:27:37.736 -08 000000102 INF: Y Motor: Xmit s r0xca 5957966\r
17-02-28 20:27:37.797 -08 000000076 INF: FPGA: Recv ZDACR 26298
17-02-28 20:27:37.797 -08 000000080 INF: Z Motor: MoveAndTrigger took 270.178 ms w/comms
17-02-28 20:27:37.797 -08 000000080 INF: Z Motor: After move to -0.1003, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:27:37.797 -08 000000080 INF: Z Motor: MoveAbsStepped took 270.3551 ms
17-02-28 20:27:37.797 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:37.799 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:37.799 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:27:37.799 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:27:37.799 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:37.800 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:27:37.800 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:27:37.800 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:37.801 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:37.801 -08 000000084 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:37.802 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:37.802 -08 000000084 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:37.802 -08 000000084 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:27:37.858 -08 000000069 INF: FPGA: Recv ZSEL 
17-02-28 20:27:37.859 -08 000000084 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:37.859 -08 000000084 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:27:37.860 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:37.860 -08 000000102 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:27:37.860 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:37.920 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:27:37.920 -08 000000084 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:37.922 -08 000000084 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:37.922 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:37.924 -08 000000084 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:27:37.924 -08 000000084 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:27:37.924 -08 000000084 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:27:37.982 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:37.982 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:37.984 -08 000000102 INF: Y Motor: Unshifted Position: 5877278
17-02-28 20:27:37.984 -08 000000084 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:27:37.985 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:37.986 -08 000000084 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:27:37.986 -08 000000084 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:27:37.986 -08 000000084 INF: Z Motor: Arming to move to -0.0603 mm
17-02-28 20:27:37.986 -08 000000084 INF: FPGA: Xmit ZYT 6437966 4\n
17-02-28 20:27:38.034 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:38.045 -08 000000037 INF: FPGA: Recv ZYT 
17-02-28 20:27:38.045 -08 000000084 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6377278 enc / 63.773 mm / ) = 6437966 enc / 64.380 mm
17-02-28 20:27:38.045 -08 000000084 INF: FPGA: Xmit ZARM 15813\n
17-02-28 20:27:38.107 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:27:38.107 -08 000000084 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8721 ms
17-02-28 20:27:38.107 -08 000000084 INF: Z Motor: ArmAbsStepped took 120.4815 ms
17-02-28 20:27:38.107 -08 000000084 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:38.108 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:27:38.110 -08 000000084 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:27:38.110 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:27:38.112 -08 000000084 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:27:38.112 -08 000000084 INF: ===================TDI Scan Setup===================
17-02-28 20:27:38.113 -08 000000084 INF: ======================================
17-02-28 20:27:38.159 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:38.171 -08 000000073 INF: X Motor: Xmit PR ER\n
17-02-28 20:27:38.236 -08 000000073 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:27:38.236 -08 000000073 INF: X Motor: Moved to 74.1416 after 500 ms
17-02-28 20:27:38.236 -08 000000073 INF: ======================================
17-02-28 20:27:38.298 -08 000000102 INF: Y Motor: Unshifted Position: 5957968
17-02-28 20:27:38.298 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:38.298 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:38.360 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:38.360 -08 000000102 INF: Y Motor: Moved to 64.5797 after 500 ms
17-02-28 20:27:38.360 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:38.422 -08 000000102 INF: Y Motor: Recv v 4096\r
17-02-28 20:27:38.422 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:38.422 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:38.485 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:38.485 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:38.485 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:38.546 -08 000000102 INF: Y Motor: Recv v 402653184\r
17-02-28 20:27:38.546 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:27:38.546 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:38.546 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:38.608 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:27:38.608 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:38.608 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:38.608 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:38.673 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:38.673 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:38.673 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:38.735 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:27:38.735 -08 000000102 INF: ======================================
17-02-28 20:27:38.736 -08 000000106 INF: ===================Move X,Y===================
17-02-28 20:27:38.737 -08 000000106 INF: ======================================
17-02-28 20:27:38.757 -08 000000082 INF: Camera #0 AttachBuffer (imageDataPtr = 56929357872 imgPtr = 56929357872 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:38.758 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:38.758 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:38.773 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:38.775 -08 000000082 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:39.766 -08 000000082 INF: Camera #2 AttachBuffer (imageDataPtr = 58741297200 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:39.766 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:39.766 -08 000000082 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:39.781 -08 000000082 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:39.782 -08 000000082 INF: ===================Camera Arm TDI===================
17-02-28 20:27:39.784 -08 000000082 INF: ======================================
17-02-28 20:27:39.785 -08 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:39.786 -08 000000080 INF: ======================================
17-02-28 20:27:39.787 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:39.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:39.788 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:27:39.788 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:27:39.857 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:27:39.857 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:27:39.917 -08 000000033 INF: FPGA: Recv ZFREQCL
17-02-28 20:27:39.917 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:27:39.917 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:39.917 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:39.979 -08 000000100 INF: FPGA: Recv TDIYERD 6457967
17-02-28 20:27:39.979 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457967 counts (64.580 mm)
17-02-28 20:27:39.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:39.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:39.981 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:39.981 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:27:39.981 -08 000000039 INF: ======================================
17-02-28 20:27:39.982 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:39.982 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:27:39.982 -08 000000051 INF: FPGA: Xmit TDIYPOS 6347041\n
17-02-28 20:27:40.041 -08 000000030 INF: FPGA: Recv TDIYPOS
17-02-28 20:27:40.041 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:40.043 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:27:40.043 -08 000000051 INF: FPGA: Xmit TDIYARM3 139264 6437966 1 1\n
17-02-28 20:27:40.106 -08 000000073 INF: FPGA: Recv TDIYARM3
17-02-28 20:27:40.106 -08 000000051 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:40.107 -08 000000051 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:40.108 -08 000000051 INF: ======================================
17-02-28 20:27:40.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:40.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:40.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:40.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:40.111 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:40.112 -08 000000102 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:27:40.112 -08 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:27:40.112 -08 000000102 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:27:40.112 -08 000000102 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:27:40.112 -08 000000102 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:27:40.112 -08 000000086 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:27:40.112 -08 000000102 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:27:40.112 -08 000000086 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:27:40.112 -08 000000086 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:27:40.115 -08 000000086 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:27:40.480 -08 000000068 INF: FPGA: Recv EX2MV
17-02-28 20:27:40.481 -08 000000068 INF: FPGA: Recv EX1MV
17-02-28 20:27:40.481 -08 000000086 INF: Excitation Filter 1: Moved -107 steps in 368.3003 ms
17-02-28 20:27:40.481 -08 000000086 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.4292 ms
17-02-28 20:27:40.481 -08 000000086 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.5117 ms
17-02-28 20:27:40.481 -08 000000102 INF: Excitation Filter 2: Moved -107 steps in 368.5102 ms
17-02-28 20:27:40.481 -08 000000102 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.7129 ms
17-02-28 20:27:40.481 -08 000000102 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.7901 ms
17-02-28 20:27:40.481 -08 000000086 INF: ======================================
17-02-28 20:27:40.481 -08 000000102 INF: ======================================
17-02-28 20:27:40.482 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:40.483 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:40.484 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:27:40.484 -08 000000105 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:40.484 -08 000000078 INF: ===================FPGA Z Wait===================
17-02-28 20:27:40.484 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:40.484 -08 000000091 INF: Y Motor: Moving to 14.9313 mm @6.500 mm/sec, started at 64.5797 mm
17-02-28 20:27:40.485 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:40.485 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:40.485 -08 000000078 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:27:40.485 -08 000000076 INF: ===================Camera TDI, Parallel===================
17-02-28 20:27:40.485 -08 000000105 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:27:40.486 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:27:40.486 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:27:40.486 -08 000000105 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:27:40.488 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:40.488 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:40.490 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:40.490 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:40.545 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:40.545 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:40.545 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:40.609 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:40.609 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:40.638 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:40.638 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:40.640 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:40.640 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:40.669 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:40.669 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:40.669 -08 000000091 INF: Y Motor: Set target position to 993132 encoder counts
17-02-28 20:27:40.669 -08 000000091 INF: Y Motor: Xmit s r0xca 993132\r
17-02-28 20:27:40.733 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:40.733 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:27:40.733 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:40.788 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:40.788 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:40.790 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:40.790 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:40.793 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:40.793 -08 000000091 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:27:40.793 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:40.854 -08 000000068 INF: FPGA: Recv ZWAIT 
17-02-28 20:27:40.854 -08 000000078 INF: ======================================
17-02-28 20:27:40.917 -08 000000091 INF: Y Motor: Unshifted Position: 5896116
17-02-28 20:27:40.938 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:40.938 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:40.938 -08 000000087 INF: ===================Camera #0 Frame #5===================
17-02-28 20:27:40.940 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:40.940 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:40.940 -08 000000069 INF: ===================Camera #2 Frame #5===================
17-02-28 20:27:40.967 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.094 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.103 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:27:41.103 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:27:41.103 -08 000000087 INF: ===================Camera #0 Frame #11===================
17-02-28 20:27:41.107 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:27:41.107 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:27:41.107 -08 000000069 INF: ===================Camera #2 Frame #11===================
17-02-28 20:27:41.232 -08 000000091 INF: Y Motor: Unshifted Position: 5695046
17-02-28 20:27:41.271 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:41.271 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:41.271 -08 000000087 INF: ===================Camera #0 Frame #17===================
17-02-28 20:27:41.276 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:41.276 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:41.276 -08 000000069 INF: ===================Camera #2 Frame #17===================
17-02-28 20:27:41.282 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.406 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.439 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:27:41.439 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:27:41.439 -08 000000087 INF: ===================Camera #0 Frame #23===================
17-02-28 20:27:41.445 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:27:41.445 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:27:41.445 -08 000000069 INF: ===================Camera #2 Frame #23===================
17-02-28 20:27:41.542 -08 000000091 INF: Y Motor: Unshifted Position: 5490953
17-02-28 20:27:41.592 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.607 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:27:41.607 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:27:41.607 -08 000000087 INF: ===================Camera #0 Frame #29===================
17-02-28 20:27:41.614 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:27:41.614 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:27:41.614 -08 000000069 INF: ===================Camera #2 Frame #29===================
17-02-28 20:27:41.716 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.776 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:27:41.776 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:27:41.776 -08 000000087 INF: ===================Camera #0 Frame #35===================
17-02-28 20:27:41.784 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:27:41.784 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:27:41.784 -08 000000069 INF: ===================Camera #2 Frame #36===================
17-02-28 20:27:41.856 -08 000000091 INF: Y Motor: Unshifted Position: 5289237
17-02-28 20:27:41.906 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:41.945 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:27:41.945 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:27:41.945 -08 000000087 INF: ===================Camera #0 Frame #42===================
17-02-28 20:27:41.957 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:27:41.957 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:27:41.957 -08 000000069 INF: ===================Camera #2 Frame #42===================
17-02-28 20:27:42.030 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.117 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:27:42.117 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:27:42.117 -08 000000087 INF: ===================Camera #0 Frame #48===================
17-02-28 20:27:42.127 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:27:42.127 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:27:42.127 -08 000000069 INF: ===================Camera #2 Frame #48===================
17-02-28 20:27:42.165 -08 000000091 INF: Y Motor: Unshifted Position: 5085782
17-02-28 20:27:42.215 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.286 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:27:42.286 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:27:42.286 -08 000000087 INF: ===================Camera #0 Frame #54===================
17-02-28 20:27:42.297 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:27:42.297 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:27:42.297 -08 000000069 INF: ===================Camera #2 Frame #55===================
17-02-28 20:27:42.342 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.455 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:27:42.455 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:27:42.455 -08 000000087 INF: ===================Camera #0 Frame #60===================
17-02-28 20:27:42.470 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:27:42.470 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:27:42.470 -08 000000069 INF: ===================Camera #2 Frame #61===================
17-02-28 20:27:42.478 -08 000000091 INF: Y Motor: Unshifted Position: 4882115
17-02-28 20:27:42.528 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.625 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:27:42.625 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:27:42.625 -08 000000087 INF: ===================Camera #0 Frame #67===================
17-02-28 20:27:42.640 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:27:42.640 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:27:42.640 -08 000000069 INF: ===================Camera #2 Frame #67===================
17-02-28 20:27:42.654 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.792 -08 000000091 INF: Y Motor: Unshifted Position: 4680395
17-02-28 20:27:42.797 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:27:42.797 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:27:42.797 -08 000000087 INF: ===================Camera #0 Frame #73===================
17-02-28 20:27:42.810 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:27:42.810 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:27:42.810 -08 000000069 INF: ===================Camera #2 Frame #73===================
17-02-28 20:27:42.842 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.966 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:27:42.966 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:42.966 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:27:42.966 -08 000000087 INF: ===================Camera #0 Frame #79===================
17-02-28 20:27:42.980 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:27:42.980 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:27:42.980 -08 000000069 INF: ===================Camera #2 Frame #80===================
17-02-28 20:27:43.102 -08 000000091 INF: Y Motor: Unshifted Position: 4476290
17-02-28 20:27:43.136 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:27:43.136 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:27:43.136 -08 000000087 INF: ===================Camera #0 Frame #85===================
17-02-28 20:27:43.152 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:43.154 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:27:43.154 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:27:43.154 -08 000000069 INF: ===================Camera #2 Frame #86===================
17-02-28 20:27:43.277 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:43.306 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:27:43.306 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:27:43.306 -08 000000087 INF: ===================Camera #0 Frame #92===================
17-02-28 20:27:43.324 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:27:43.324 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:27:43.324 -08 000000069 INF: ===================Camera #2 Frame #92===================
17-02-28 20:27:43.413 -08 000000091 INF: Y Motor: Unshifted Position: 4273918
17-02-28 20:27:43.463 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:43.479 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:27:43.479 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:27:43.479 -08 000000087 INF: ===================Camera #0 Frame #98===================
17-02-28 20:27:43.494 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:27:43.494 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:27:43.494 -08 000000069 INF: ===================Camera #2 Frame #99===================
17-02-28 20:27:43.590 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:43.648 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:27:43.648 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:27:43.648 -08 000000087 INF: ===================Camera #0 Frame #104===================
17-02-28 20:27:43.667 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:27:43.667 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:27:43.667 -08 000000069 INF: ===================Camera #2 Frame #105===================
17-02-28 20:27:43.727 -08 000000091 INF: Y Motor: Unshifted Position: 4070469
17-02-28 20:27:43.777 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:43.818 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:27:43.818 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:27:43.818 -08 000000087 INF: ===================Camera #0 Frame #111===================
17-02-28 20:27:43.838 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:27:43.838 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:27:43.838 -08 000000069 INF: ===================Camera #2 Frame #111===================
17-02-28 20:27:43.900 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:43.991 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:27:43.991 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:27:43.991 -08 000000087 INF: ===================Camera #0 Frame #117===================
17-02-28 20:27:44.008 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:27:44.008 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:27:44.009 -08 000000069 INF: ===================Camera #2 Frame #118===================
17-02-28 20:27:44.040 -08 000000091 INF: Y Motor: Unshifted Position: 3868973
17-02-28 20:27:44.090 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:44.161 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:27:44.161 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:27:44.161 -08 000000087 INF: ===================Camera #0 Frame #123===================
17-02-28 20:27:44.183 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:27:44.183 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:27:44.183 -08 000000069 INF: ===================Camera #2 Frame #124===================
17-02-28 20:27:44.214 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:44.331 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:27:44.331 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:27:44.331 -08 000000087 INF: ===================Camera #0 Frame #129===================
17-02-28 20:27:44.350 -08 000000091 INF: Y Motor: Unshifted Position: 3664650
17-02-28 20:27:44.354 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:27:44.354 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:27:44.354 -08 000000069 INF: ===================Camera #2 Frame #130===================
17-02-28 20:27:44.400 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:44.501 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:27:44.501 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:27:44.501 -08 000000087 INF: ===================Camera #0 Frame #136===================
17-02-28 20:27:44.524 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:44.525 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:27:44.525 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:27:44.525 -08 000000069 INF: ===================Camera #2 Frame #137===================
17-02-28 20:27:44.664 -08 000000091 INF: Y Motor: Unshifted Position: 3462941
17-02-28 20:27:44.674 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:27:44.674 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:27:44.674 -08 000000087 INF: ===================Camera #0 Frame #142===================
17-02-28 20:27:44.699 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:27:44.699 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:27:44.699 -08 000000069 INF: ===================Camera #2 Frame #143===================
17-02-28 20:27:44.714 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:44.835 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:44.842 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:27:44.842 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:27:44.842 -08 000000087 INF: ===================Camera #0 Frame #148===================
17-02-28 20:27:44.868 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:27:44.868 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:27:44.868 -08 000000069 INF: ===================Camera #2 Frame #149===================
17-02-28 20:27:44.974 -08 000000091 INF: Y Motor: Unshifted Position: 3258838
17-02-28 20:27:45.011 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:27:45.011 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:27:45.011 -08 000000087 INF: ===================Camera #0 Frame #154===================
17-02-28 20:27:45.024 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:45.039 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:27:45.039 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:27:45.039 -08 000000069 INF: ===================Camera #2 Frame #156===================
17-02-28 20:27:45.148 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:45.181 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:27:45.181 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:27:45.181 -08 000000087 INF: ===================Camera #0 Frame #161===================
17-02-28 20:27:45.213 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:27:45.213 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:27:45.213 -08 000000069 INF: ===================Camera #2 Frame #162===================
17-02-28 20:27:45.288 -08 000000091 INF: Y Motor: Unshifted Position: 3057124
17-02-28 20:27:45.338 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:45.354 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:27:45.354 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:27:45.354 -08 000000087 INF: ===================Camera #0 Frame #167===================
17-02-28 20:27:45.384 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:27:45.384 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:27:45.384 -08 000000069 INF: ===================Camera #2 Frame #168===================
17-02-28 20:27:45.462 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:45.522 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:27:45.522 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:27:45.522 -08 000000087 INF: ===================Camera #0 Frame #173===================
17-02-28 20:27:45.555 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:27:45.555 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:27:45.555 -08 000000069 INF: ===================Camera #2 Frame #175===================
17-02-28 20:27:45.598 -08 000000091 INF: Y Motor: Unshifted Position: 2853028
17-02-28 20:27:45.648 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:45.691 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:27:45.691 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:27:45.691 -08 000000087 INF: ===================Camera #0 Frame #180===================
17-02-28 20:27:45.729 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:27:45.729 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:27:45.729 -08 000000069 INF: ===================Camera #2 Frame #181===================
17-02-28 20:27:45.772 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:45.864 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:27:45.864 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:27:45.864 -08 000000087 INF: ===================Camera #0 Frame #186===================
17-02-28 20:27:45.900 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:27:45.900 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:27:45.900 -08 000000069 INF: ===================Camera #2 Frame #187===================
17-02-28 20:27:45.912 -08 000000091 INF: Y Motor: Unshifted Position: 2651315
17-02-28 20:27:45.962 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.032 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:27:46.032 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:27:46.032 -08 000000087 INF: ===================Camera #0 Frame #192===================
17-02-28 20:27:46.071 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:27:46.071 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:27:46.071 -08 000000069 INF: ===================Camera #2 Frame #194===================
17-02-28 20:27:46.084 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.201 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:27:46.201 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:27:46.201 -08 000000087 INF: ===================Camera #0 Frame #198===================
17-02-28 20:27:46.221 -08 000000091 INF: Y Motor: Unshifted Position: 2446570
17-02-28 20:27:46.245 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:27:46.245 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:27:46.245 -08 000000069 INF: ===================Camera #2 Frame #200===================
17-02-28 20:27:46.271 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.372 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:27:46.372 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:27:46.372 -08 000000087 INF: ===================Camera #0 Frame #205===================
17-02-28 20:27:46.396 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.417 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:27:46.417 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:27:46.417 -08 000000069 INF: ===================Camera #2 Frame #206===================
17-02-28 20:27:46.535 -08 000000091 INF: Y Motor: Unshifted Position: 2244209
17-02-28 20:27:46.545 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:27:46.545 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:27:46.545 -08 000000087 INF: ===================Camera #0 Frame #211===================
17-02-28 20:27:46.585 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.588 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:27:46.588 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:27:46.588 -08 000000069 INF: ===================Camera #2 Frame #213===================
17-02-28 20:27:46.709 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.715 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:27:46.715 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:27:46.715 -08 000000087 INF: ===================Camera #0 Frame #217===================
17-02-28 20:27:46.762 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:27:46.762 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:27:46.762 -08 000000069 INF: ===================Camera #2 Frame #219===================
17-02-28 20:27:46.849 -08 000000091 INF: Y Motor: Unshifted Position: 2042701
17-02-28 20:27:46.885 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:27:46.885 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:27:46.885 -08 000000087 INF: ===================Camera #0 Frame #223===================
17-02-28 20:27:46.899 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:46.933 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:27:46.933 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:27:46.933 -08 000000069 INF: ===================Camera #2 Frame #225===================
17-02-28 20:27:47.021 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.055 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:27:47.055 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:27:47.055 -08 000000087 INF: ===================Camera #0 Frame #230===================
17-02-28 20:27:47.104 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:27:47.104 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:27:47.104 -08 000000069 INF: ===================Camera #2 Frame #232===================
17-02-28 20:27:47.159 -08 000000091 INF: Y Motor: Unshifted Position: 1838384
17-02-28 20:27:47.209 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.228 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:27:47.228 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:27:47.228 -08 000000087 INF: ===================Camera #0 Frame #236===================
17-02-28 20:27:47.278 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:27:47.278 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:27:47.278 -08 000000069 INF: ===================Camera #2 Frame #238===================
17-02-28 20:27:47.334 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.398 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:27:47.398 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:27:47.398 -08 000000087 INF: ===================Camera #0 Frame #242===================
17-02-28 20:27:47.449 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:27:47.449 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:27:47.449 -08 000000069 INF: ===================Camera #2 Frame #244===================
17-02-28 20:27:47.470 -08 000000091 INF: Y Motor: Unshifted Position: 1634930
17-02-28 20:27:47.520 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.568 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:27:47.568 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:27:47.568 -08 000000087 INF: ===================Camera #0 Frame #249===================
17-02-28 20:27:47.620 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:27:47.620 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:27:47.620 -08 000000069 INF: ===================Camera #2 Frame #251===================
17-02-28 20:27:47.644 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.741 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:27:47.741 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:27:47.741 -08 000000087 INF: ===================Camera #0 Frame #255===================
17-02-28 20:27:47.784 -08 000000091 INF: Y Motor: Unshifted Position: 1432557
17-02-28 20:27:47.794 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:27:47.794 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:27:47.794 -08 000000069 INF: ===================Camera #2 Frame #257===================
17-02-28 20:27:47.834 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.911 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:27:47.911 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:27:47.911 -08 000000087 INF: ===================Camera #0 Frame #261===================
17-02-28 20:27:47.958 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:47.965 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:27:47.965 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:27:47.965 -08 000000069 INF: ===================Camera #2 Frame #263===================
17-02-28 20:27:48.081 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:27:48.081 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:27:48.081 -08 000000087 INF: ===================Camera #0 Frame #267===================
17-02-28 20:27:48.094 -08 000000091 INF: Y Motor: Unshifted Position: 1230176
17-02-28 20:27:48.136 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:27:48.136 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:27:48.136 -08 000000069 INF: ===================Camera #2 Frame #270===================
17-02-28 20:27:48.144 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:48.216 -08 000000084 INF: FPGA: Recv TDIYWAIT
17-02-28 20:27:48.216 -08 000000105 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:48.218 -08 000000105 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:27:48.219 -08 000000108 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:27:48.219 -08 000000070 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:27:48.219 -08 000000108 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:27:48.219 -08 000000108 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:27:48.219 -08 000000108 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:27:48.219 -08 000000070 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:27:48.219 -08 000000070 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:27:48.219 -08 000000070 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:27:48.219 -08 000000108 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:27:48.222 -08 000000070 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:27:48.251 -08 000000087 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:27:48.251 -08 000000087 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:27:48.251 -08 000000087 INF: ===================Camera #0 Frame #272===================
17-02-28 20:27:48.267 -08 000000087 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:27:48.268 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:48.268 -08 000000087 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:48.407 -08 000000091 INF: Y Motor: Unshifted Position: 1026734
17-02-28 20:27:48.434 -08 000000087 INF: Camera #0 ReleaseBuffer
17-02-28 20:27:48.434 -08 000000069 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:27:48.434 -08 000000069 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:27:48.434 -08 000000069 INF: ===================Camera #2 Frame #272===================
17-02-28 20:27:48.434 -08 000000087 INF: ===================Camera TDI===================
17-02-28 20:27:48.440 -08 000000069 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:27:48.441 -08 000000069 INF: ===================CameraTDI Cleanup===================
17-02-28 20:27:48.457 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:48.464 -08 000000087 INF: ======================================
17-02-28 20:27:48.591 -08 000000056 INF: FPGA: Recv EX1MV
17-02-28 20:27:48.591 -08 000000056 INF: FPGA: Recv EX2MV
17-02-28 20:27:48.591 -08 000000108 INF: Excitation Filter 1: Moved 107 steps in 372.1921 ms
17-02-28 20:27:48.591 -08 000000108 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3415 ms
17-02-28 20:27:48.591 -08 000000108 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.4989 ms
17-02-28 20:27:48.591 -08 000000070 INF: Excitation Filter 2: Moved 107 steps in 372.0864 ms
17-02-28 20:27:48.591 -08 000000070 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.5651 ms
17-02-28 20:27:48.592 -08 000000070 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.6867 ms
17-02-28 20:27:48.592 -08 000000108 INF: ======================================
17-02-28 20:27:48.592 -08 000000070 INF: ======================================
17-02-28 20:27:48.593 -08 000000091 INF: Y Motor: Unshifted Position: 993132
17-02-28 20:27:48.593 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:48.593 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:48.593 -08 000000105 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:48.594 -08 000000105 INF: ======================================
17-02-28 20:27:48.640 -08 000000069 INF: Camera #2 ReleaseBuffer
17-02-28 20:27:48.640 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:27:48.655 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:48.655 -08 000000091 INF: Y Motor: Moved to 14.9313 after 7861 ms
17-02-28 20:27:48.655 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:48.675 -08 000000069 INF: ======================================
17-02-28 20:27:48.676 -08 000000076 INF: ===================Camera TDI===================
17-02-28 20:27:48.677 -08 000000076 INF: ======================================
17-02-28 20:27:48.717 -08 000000091 INF: Y Motor: Recv v 4097\r
17-02-28 20:27:48.717 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:48.717 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:48.782 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:48.782 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:48.782 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:48.844 -08 000000091 INF: Y Motor: Recv v 134217728\r
17-02-28 20:27:48.844 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:27:48.844 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:48.844 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:48.906 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:48.906 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:48.906 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:48.906 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:48.968 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:48.968 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:48.968 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:49.030 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:49.030 -08 000000091 INF: ======================================
17-02-28 20:27:49.031 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:49.032 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:49.033 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.033 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:27:49.090 -08 000000070 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:27:49.090 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:49.152 -08 000000039 INF: FPGA: Recv TDIYERD 1493133
17-02-28 20:27:49.152 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:27:49.217 -08 000000047 INF: FPGA: Recv ZADCR 20830
17-02-28 20:27:49.217 -08 000000042 INF: At scan end Y pos = 14.931 and Z pos = -0.080. Y moved -48.539 mm
17-02-28 20:27:49.217 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:27:49.279 -08 000000033 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:27:49.279 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:27:49.279 -08 000000042 INF: TDIScan finished after 11776.8866 ms
17-02-28 20:27:49.279 -08 000000042 INF: Image[0]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:27:49.279 -08 000000042 INF: Image[2]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:27:49.281 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.315 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.521 um
17-02-28 20:27:49.316 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.316 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:27:49.341 -08 000000105 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:27:49.341 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.342 -08 000000028 INF: ===================Dither Clean Up Command===================
17-02-28 20:27:49.342 -08 000000077 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:27:49.342 -08 000000060 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:27:49.342 -08 000000039 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:27:49.342 -08 000000039 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:27:49.342 -08 000000039 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:27:49.343 -08 000000077 INF: ======================================
17-02-28 20:27:49.343 -08 000000060 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:27:49.343 -08 000000060 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:27:49.343 -08 000000082 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:27:49.343 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:49.344 -08 000000082 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:27:49.346 -08 000000029 INF: ===================LFT:Extracting coords===================
17-02-28 20:27:49.371 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:49.372 -08 000000029 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:27:49.373 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.373 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.373 -08 000000080 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.373 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.373 -08 000000074 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:49.373 -08 000000080 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:49.373 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:49.373 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:27:49.403 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:49.403 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:27:49.403 -08 000000082 INF: FPGA: Xmit ZDACW 26298\n
17-02-28 20:27:49.403 -08 000000039 INF: ======================================
17-02-28 20:27:49.405 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:27:49.405 -08 000000060 INF: ======================================
17-02-28 20:27:49.447 -08 000000074 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:49.447 -08 000000080 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:49.448 -08 000000076 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:49.448 -08 000000033 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:27:49.465 -08 000000106 INF: FPGA: Recv ZDACW 
17-02-28 20:27:49.466 -08 000000082 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:27:49.466 -08 000000082 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:27:49.527 -08 000000060 INF: FPGA: Recv TDIBB
17-02-28 20:27:49.527 -08 000000082 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:27:49.528 -08 000000082 INF: ======================================
17-02-28 20:27:49.598 -08 000000080 INF: LFT found best fwhm score 2.000133 in 151 ms
17-02-28 20:27:49.599 -08 000000080 INF: LFT found good score at index 229 with fwhm value 2.000133. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:3,B
17-02-28 20:27:49.599 -08 000000074 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:27:49.599 -08 000000074 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0803214276661005 in the next cycle, cycle 4 FC:B, C:3,L:3,B
17-02-28 20:27:49.599 -08 000000080 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.599 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.599 -08 000000076 INF: LFT found best fwhm score 2.000543 in 151 ms
17-02-28 20:27:49.599 -08 000000080 INF: ======================================
17-02-28 20:27:49.599 -08 000000076 INF: LFT found good score at index 293 with fwhm value 2.000543. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:3,B
17-02-28 20:27:49.599 -08 000000074 INF: ======================================
17-02-28 20:27:49.599 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.600 -08 000000076 INF: ======================================
17-02-28 20:27:49.600 -08 000000033 INF: LFT found best fwhm score 2.00002 in 152 ms
17-02-28 20:27:49.600 -08 000000033 INF: LFT found good score at index 3089 with fwhm value 2.00002. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:3,B
17-02-28 20:27:49.601 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:27:49.601 -08 000000033 INF: ======================================
17-02-28 20:27:49.602 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:27:49.603 -08 000000029 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:3,B
17-02-28 20:27:49.603 -08 000000029 INF: ======================================
17-02-28 20:27:49.604 -08 000000028 INF: ======================================
17-02-28 20:27:49.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:27:49.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.606 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:27:49.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:27:49.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:27:49.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:27:49.608 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:27:49.608 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:27:49.608 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:27:49.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:27:49.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 1 - X = 74.15818 Y = 39.78827===================
17-02-28 20:27:49.631 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:27:49.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:27:49.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:27:49.632 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:49.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:27:49.632 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:27:49.633 -08 000000042 INF: Transformed XStagePosition from 75.26618 mm to 75.2413419466466 mm.
17-02-28 20:27:49.644 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5803478014432 mm.
17-02-28 20:27:49.644 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3803478014432 mm.
17-02-28 20:27:49.644 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4710978014432 mm.
17-02-28 20:27:49.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:27:49.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:49.647 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -100.3 um, section = C_1
17-02-28 20:27:49.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:49.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:49.678 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":3,"Tile":2102,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF222","HCSMMF280","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.679 -08 000000077 INF: ===================MoveEmissionFilters===================
17-02-28 20:27:49.680 -08 000000100 INF: ===================Move X,Y===================
17-02-28 20:27:49.680 -08 000000100 INF: ===================Move X,Y, Parallel===================
17-02-28 20:27:49.681 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:49.682 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:27:49.682 -08 000000028 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:27:49.682 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:49.683 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:49.683 -08 000000073 INF: ===================Move X Motor without settling===================
17-02-28 20:27:49.684 -08 000000073 INF: X Motor: Xmit PR VM\n
17-02-28 20:27:49.684 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:27:49.684 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:49.693 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:49.696 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:49.696 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:49.696 -08 000000091 INF: Y Motor: Moving to 64.5803 mm @25.000 mm/sec, started at 14.9313 mm
17-02-28 20:27:49.697 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:49.697 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:49.702 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:49.702 -08 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:27:49.703 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:27:49.703 -08 000000056 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:27:49.703 -08 000000029 INF: ======================================
17-02-28 20:27:49.703 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:27:49.703 -08 000000056 INF: ======================================
17-02-28 20:27:49.704 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:27:49.704 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:49.704 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:49.705 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:49.705 -08 000000070 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:27:49.705 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:49.705 -08 000000070 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:27:49.705 -08 000000029 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:27:49.705 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:49.705 -08 000000090 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:27:49.705 -08 000000051 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:27:49.705 -08 000000056 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:27:49.705 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:49.705 -08 000000090 INF: ======================================
17-02-28 20:27:49.706 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:27:49.706 -08 000000056 INF: ======================================
17-02-28 20:27:49.706 -08 000000070 INF: ======================================
17-02-28 20:27:49.706 -08 000000029 INF: ======================================
17-02-28 20:27:49.707 -08 000000047 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:27:49.707 -08 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:27:49.707 -08 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:27:49.707 -08 000000056 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:27:49.708 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:27:49.708 -08 000000056 INF: ======================================
17-02-28 20:27:49.708 -08 000000047 INF: ======================================
17-02-28 20:27:49.709 -08 000000037 INF: ======================================
17-02-28 20:27:49.709 -08 000000087 INF: ======================================
17-02-28 20:27:49.710 -08 000000090 INF: ======================================
17-02-28 20:27:49.711 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":3,"Tile":2106,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF256","HCSMMF246","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.712 -08 000000050 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:27:49.714 -08 000000050 INF: ======================================
17-02-28 20:27:49.715 -08 000000077 INF: ======================================
17-02-28 20:27:49.720 -08 000000073 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:27:49.720 -08 000000073 INF: X Motor: Xmit PR VI\n
17-02-28 20:27:49.763 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":3,"Tile":2104,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF276","HCSMMF209","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.774 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":3,"Tile":2101,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF235","HCSMMF286","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.779 -08 000000050 INF: FPGA: Recv ZSEL 
17-02-28 20:27:49.780 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:49.780 -08 000000051 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:27:49.781 -08 000000073 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:27:49.781 -08 000000073 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:27:49.781 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:49.781 -08 000000073 INF: X Motor: Moving to 75.2413 mm @15.000 mm/sec, started at 74.1416 mm
17-02-28 20:27:49.781 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:49.781 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:49.781 -08 000000073 INF: X Motor: Xmit MA 6652\n
17-02-28 20:27:49.786 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":3,"Tile":2105,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF190","HCSMMF227","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.788 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":3,"Tile":2103,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF236","HCSMMF259","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.789 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":3,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF224","HCSMMF201","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.791 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":3,"Tile":2109,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF205","HCSMMF186","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.793 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":3,"Tile":2110,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF248","HCSMMF251","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.795 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":3,"Tile":2108,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF254","HCSMMF196","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.797 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":3,"Tile":2112,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF257","HCSMMF264","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.799 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":3,"Tile":2111,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF178","HCSMMF238","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.825 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":3,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF245","HCSMMF247","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.826 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":3,"Tile":2114,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF197","HCSMMF267","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.828 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":3,"Tile":2117,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF230","HCSMMF270","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.829 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":3,"Tile":2120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF241","HCSMMF268","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.829 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":3,"Tile":2113,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF234","HCSMMF272","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.830 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":3,"Tile":2116,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF191","HCSMMF214","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.831 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":3,"Tile":2119,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF226","HCSMMF250","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.832 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":3,"Tile":2123,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF217","HCSMMF198","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.833 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":3,"Tile":2118,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF242","HCSMMF284","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.834 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":3,"Tile":2124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF275","HCSMMF206","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.836 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":3,"Tile":2122,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF208","HCSMMF221","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.838 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":3,"Tile":2126,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF199","HCSMMF189","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.841 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:27:49.841 -08 000000051 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:27:49.843 -08 000000073 INF: X Motor: Recv MA 6652\r\n>
17-02-28 20:27:49.843 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":3,"Tile":2121,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF252","HCSMMF258","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.843 -08 000000051 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:27:49.843 -08 000000073 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:27:49.843 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:49.844 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:49.844 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:49.844 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":3,"Tile":2127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF210","HCSMMF188","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.845 -08 000000051 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:27:49.845 -08 000000051 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:27:49.845 -08 000000051 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:27:49.849 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":3,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF182","HCSMMF183","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.851 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":3,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF281","HCSMMF213","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:27:49.867 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:49.873 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:27:49.903 -08 000000034 INF: FPGA: Recv ZSTEP 
17-02-28 20:27:49.904 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:49.905 -08 000000051 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:27:49.906 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:49.906 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:49.906 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:49.906 -08 000000091 INF: Y Motor: Set target position to 5958035 encoder counts
17-02-28 20:27:49.906 -08 000000091 INF: Y Motor: Xmit s r0xca 5958035\r
17-02-28 20:27:49.907 -08 000000051 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:27:49.907 -08 000000051 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:27:49.908 -08 000000051 INF: Z Motor: Arming to move to -0.0603 mm
17-02-28 20:27:49.908 -08 000000051 INF: FPGA: Xmit ZYT 6438035 4\n
17-02-28 20:27:49.965 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:49.965 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:27:49.965 -08 000000030 INF: FPGA: Recv ZYT 
17-02-28 20:27:49.965 -08 000000051 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1493132 enc / 14.931 mm / ) = 6438035 enc / 64.380 mm
17-02-28 20:27:49.965 -08 000000051 INF: FPGA: Xmit ZARM 15813\n
17-02-28 20:27:49.968 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:49.968 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:27:49.968 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:50.002 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:50.007 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:27:50.027 -08 000000050 INF: FPGA: Recv ZARM
17-02-28 20:27:50.027 -08 000000051 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9968 ms
17-02-28 20:27:50.027 -08 000000051 INF: Z Motor: ArmAbsStepped took 119.441 ms
17-02-28 20:27:50.027 -08 000000051 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:27:50.029 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:50.029 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:27:50.029 -08 000000091 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:27:50.029 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:50.030 -08 000000051 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:27:50.031 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:27:50.032 -08 000000051 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:27:50.032 -08 000000051 INF: ===================TDI Scan Setup===================
17-02-28 20:27:50.034 -08 000000051 INF: ======================================
17-02-28 20:27:50.106 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:50.112 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:27:50.153 -08 000000091 INF: Y Motor: Unshifted Position: 1073379
17-02-28 20:27:50.203 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:50.204 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:50.210 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:27:50.300 -08 000000038 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:50.300 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:50.300 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:50.312 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:27:50.315 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:50.317 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:27:50.328 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:50.467 -08 000000073 INF: X Motor: Xmit PR ER\n
17-02-28 20:27:50.467 -08 000000091 INF: Y Motor: Unshifted Position: 1779796
17-02-28 20:27:50.517 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:50.529 -08 000000073 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:27:50.529 -08 000000073 INF: X Motor: Moved to 75.2402 after 686 ms
17-02-28 20:27:50.529 -08 000000073 INF: ======================================
17-02-28 20:27:50.591 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:27:50.642 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:50.777 -08 000000091 INF: Y Motor: Unshifted Position: 2558152
17-02-28 20:27:50.827 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:50.915 -08 000000038 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:27:50.915 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:27:50.915 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:27:50.930 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:27:50.932 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:27:50.933 -08 000000038 INF: ======================================
17-02-28 20:27:50.934 -08 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:27:50.936 -08 000000028 INF: ======================================
17-02-28 20:27:50.951 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:51.090 -08 000000091 INF: Y Motor: Unshifted Position: 3341426
17-02-28 20:27:51.140 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:51.264 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:51.403 -08 000000091 INF: Y Motor: Unshifted Position: 4116507
17-02-28 20:27:51.453 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:51.577 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:51.713 -08 000000091 INF: Y Motor: Unshifted Position: 4899763
17-02-28 20:27:51.763 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:51.887 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:52.026 -08 000000091 INF: Y Motor: Unshifted Position: 5681005
17-02-28 20:27:52.076 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:52.200 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:52.339 -08 000000091 INF: Y Motor: Unshifted Position: 5958037
17-02-28 20:27:52.389 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:52.525 -08 000000091 INF: Y Motor: Unshifted Position: 5958036
17-02-28 20:27:52.525 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:27:52.525 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:52.587 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:52.587 -08 000000091 INF: Y Motor: Moved to 64.5804 after 2558 ms
17-02-28 20:27:52.587 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:27:52.649 -08 000000091 INF: Y Motor: Recv v 4096\r
17-02-28 20:27:52.649 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:27:52.649 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:52.711 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:52.711 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:52.711 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:27:52.773 -08 000000091 INF: Y Motor: Recv v 402653184\r
17-02-28 20:27:52.773 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:27:52.773 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:27:52.773 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:27:52.838 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:27:52.838 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:27:52.838 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:27:52.838 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:52.900 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:52.900 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:27:52.900 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:52.962 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:27:52.962 -08 000000091 INF: ======================================
17-02-28 20:27:52.963 -08 000000100 INF: ===================Move X,Y===================
17-02-28 20:27:52.964 -08 000000100 INF: ======================================
17-02-28 20:27:52.965 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:27:52.966 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:52.966 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:27:52.966 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:27:53.027 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:27:53.027 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:27:53.084 -08 000000090 INF: FPGA: Recv ZFREQCL
17-02-28 20:27:53.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:27:53.084 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:53.085 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:27:53.146 -08 000000106 INF: FPGA: Recv TDIYERD 6458036
17-02-28 20:27:53.146 -08 000000042 INF: Before scan, Y encoder from FPGA = 6458036 counts (64.580 mm)
17-02-28 20:27:53.146 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:53.147 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:53.148 -08 000000105 INF: ===================Set YMotor gains for scans===================
17-02-28 20:27:53.148 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:53.148 -08 000000105 INF: ======================================
17-02-28 20:27:53.149 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:53.149 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:27:53.149 -08 000000077 INF: FPGA: Xmit TDIYPOS 6347110\n
17-02-28 20:27:53.210 -08 000000090 INF: FPGA: Recv TDIYPOS
17-02-28 20:27:53.211 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:53.212 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:27:53.213 -08 000000077 INF: FPGA: Xmit TDIYARM3 139264 6438035 1 1\n
17-02-28 20:27:53.270 -08 000000080 INF: FPGA: Recv TDIYARM3
17-02-28 20:27:53.271 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:27:53.272 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:27:53.273 -08 000000077 INF: ======================================
17-02-28 20:27:53.274 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:27:53.274 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:27:53.275 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:53.275 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:53.276 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:53.276 -08 000000069 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:27:53.276 -08 000000074 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:27:53.277 -08 000000069 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:27:53.277 -08 000000069 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:27:53.277 -08 000000069 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:27:53.277 -08 000000074 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:27:53.277 -08 000000074 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:27:53.277 -08 000000074 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:27:53.277 -08 000000069 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:27:53.278 -08 000000074 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:27:53.646 -08 000000082 INF: FPGA: Recv EX1MV
17-02-28 20:27:53.646 -08 000000082 INF: FPGA: Recv EX2MV
17-02-28 20:27:53.646 -08 000000074 INF: Excitation Filter 2: Moved -107 steps in 369.6218 ms
17-02-28 20:27:53.647 -08 000000074 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.8062 ms
17-02-28 20:27:53.647 -08 000000074 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.8826 ms
17-02-28 20:27:53.647 -08 000000069 INF: Excitation Filter 1: Moved -107 steps in 369.9233 ms
17-02-28 20:27:53.647 -08 000000069 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 370.1313 ms
17-02-28 20:27:53.647 -08 000000069 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 370.2035 ms
17-02-28 20:27:53.647 -08 000000074 INF: ======================================
17-02-28 20:27:53.647 -08 000000069 INF: ======================================
17-02-28 20:27:53.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:53.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:27:53.651 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:27:53.651 -08 000000038 INF: ===================FPGA Z Wait===================
17-02-28 20:27:53.651 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:27:53.651 -08 000000033 INF: ===================Move Y Motor without settling===================
17-02-28 20:27:53.651 -08 000000038 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:27:53.651 -08 000000033 INF: Y Motor: Moving to 14.9320 mm @6.500 mm/sec, started at 64.5804 mm
17-02-28 20:27:53.651 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:27:53.651 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:27:53.651 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:27:53.652 -08 000000037 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:27:53.652 -08 000000037 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:27:53.652 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:27:53.652 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:27:53.654 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:53.654 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:53.654 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:53.654 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:53.710 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:27:53.710 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:27:53.710 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:27:53.772 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:27:53.772 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:27:53.804 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:53.804 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:53.805 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:53.805 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:53.834 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:27:53.834 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:27:53.834 -08 000000033 INF: Y Motor: Set target position to 993201 encoder counts
17-02-28 20:27:53.834 -08 000000033 INF: Y Motor: Xmit s r0xca 993201\r
17-02-28 20:27:53.896 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:27:53.896 -08 000000033 INF: Y Motor: Start the move command
17-02-28 20:27:53.896 -08 000000033 INF: Y Motor: Xmit t 1\r
17-02-28 20:27:53.954 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:53.954 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:53.955 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:27:53.955 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:27:53.961 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:27:53.961 -08 000000033 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:27:53.961 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.023 -08 000000073 INF: FPGA: Recv ZWAIT 
17-02-28 20:27:54.024 -08 000000038 INF: ======================================
17-02-28 20:27:54.085 -08 000000033 INF: Y Motor: Unshifted Position: 5894237
17-02-28 20:27:54.104 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:54.104 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:54.104 -08 000000091 INF: ===================Camera #2 Frame #5===================
17-02-28 20:27:54.105 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:27:54.105 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:27:54.105 -08 000000100 INF: ===================Camera #0 Frame #5===================
17-02-28 20:27:54.135 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.259 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.277 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:27:54.277 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:27:54.277 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:27:54.277 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:27:54.277 -08 000000100 INF: ===================Camera #0 Frame #11===================
17-02-28 20:27:54.277 -08 000000091 INF: ===================Camera #2 Frame #11===================
17-02-28 20:27:54.396 -08 000000033 INF: Y Motor: Unshifted Position: 5691865
17-02-28 20:27:54.446 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.453 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:27:54.453 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:27:54.453 -08 000000100 INF: ===================Camera #0 Frame #17===================
17-02-28 20:27:54.455 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:27:54.455 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:27:54.455 -08 000000091 INF: ===================Camera #2 Frame #18===================
17-02-28 20:27:54.570 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.626 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:27:54.626 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:27:54.626 -08 000000100 INF: ===================Camera #0 Frame #24===================
17-02-28 20:27:54.633 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:27:54.633 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:27:54.633 -08 000000091 INF: ===================Camera #2 Frame #24===================
17-02-28 20:27:54.709 -08 000000033 INF: Y Motor: Unshifted Position: 5488429
17-02-28 20:27:54.759 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.803 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:27:54.803 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:27:54.803 -08 000000091 INF: ===================Camera #2 Frame #30===================
17-02-28 20:27:54.804 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:27:54.804 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:27:54.804 -08 000000100 INF: ===================Camera #0 Frame #30===================
17-02-28 20:27:54.883 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:54.975 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:27:54.975 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:27:54.975 -08 000000091 INF: ===================Camera #2 Frame #37===================
17-02-28 20:27:54.979 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:27:54.979 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:27:54.979 -08 000000100 INF: ===================Camera #0 Frame #37===================
17-02-28 20:27:55.022 -08 000000033 INF: Y Motor: Unshifted Position: 5286704
17-02-28 20:27:55.072 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:55.159 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:27:55.159 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:27:55.159 -08 000000091 INF: ===================Camera #2 Frame #43===================
17-02-28 20:27:55.161 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:27:55.161 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:27:55.161 -08 000000100 INF: ===================Camera #0 Frame #44===================
17-02-28 20:27:55.196 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:55.330 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:27:55.330 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:27:55.330 -08 000000091 INF: ===================Camera #2 Frame #50===================
17-02-28 20:27:55.333 -08 000000033 INF: Y Motor: Unshifted Position: 5083027
17-02-28 20:27:55.342 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:27:55.342 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:27:55.342 -08 000000100 INF: ===================Camera #0 Frame #50===================
17-02-28 20:27:55.383 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:55.505 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:27:55.505 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:27:55.505 -08 000000091 INF: ===================Camera #2 Frame #56===================
17-02-28 20:27:55.506 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:55.511 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:27:55.511 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:27:55.511 -08 000000100 INF: ===================Camera #0 Frame #56===================
17-02-28 20:27:55.645 -08 000000033 INF: Y Motor: Unshifted Position: 4879581
17-02-28 20:27:55.682 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:27:55.682 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:27:55.682 -08 000000100 INF: ===================Camera #0 Frame #63===================
17-02-28 20:27:55.685 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:27:55.685 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:27:55.685 -08 000000091 INF: ===================Camera #2 Frame #63===================
17-02-28 20:27:55.695 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:55.819 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:55.863 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:27:55.863 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:27:55.863 -08 000000100 INF: ===================Camera #0 Frame #69===================
17-02-28 20:27:55.867 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:27:55.867 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:27:55.867 -08 000000091 INF: ===================Camera #2 Frame #70===================
17-02-28 20:27:55.958 -08 000000033 INF: Y Motor: Unshifted Position: 4678082
17-02-28 20:27:56.008 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:56.032 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:27:56.032 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:27:56.032 -08 000000100 INF: ===================Camera #0 Frame #76===================
17-02-28 20:27:56.049 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:27:56.049 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:27:56.049 -08 000000091 INF: ===================Camera #2 Frame #76===================
17-02-28 20:27:56.133 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:56.206 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:27:56.206 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:27:56.206 -08 000000100 INF: ===================Camera #0 Frame #82===================
17-02-28 20:27:56.223 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:27:56.223 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:27:56.223 -08 000000091 INF: ===================Camera #2 Frame #83===================
17-02-28 20:27:56.271 -08 000000033 INF: Y Motor: Unshifted Position: 4474407
17-02-28 20:27:56.322 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:56.375 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:27:56.375 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:27:56.375 -08 000000100 INF: ===================Camera #0 Frame #88===================
17-02-28 20:27:56.397 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:27:56.397 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:27:56.397 -08 000000091 INF: ===================Camera #2 Frame #89===================
17-02-28 20:27:56.443 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:56.543 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:27:56.543 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:27:56.543 -08 000000100 INF: ===================Camera #0 Frame #94===================
17-02-28 20:27:56.566 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:27:56.566 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:27:56.566 -08 000000091 INF: ===================Camera #2 Frame #95===================
17-02-28 20:27:56.582 -08 000000033 INF: Y Motor: Unshifted Position: 4270952
17-02-28 20:27:56.632 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:56.711 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:27:56.711 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:27:56.711 -08 000000100 INF: ===================Camera #0 Frame #101===================
17-02-28 20:27:56.736 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:27:56.736 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:27:56.736 -08 000000091 INF: ===================Camera #2 Frame #102===================
17-02-28 20:27:56.756 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:56.862 -08 000000068 INF: RunCopyService queue size at 2/28/2017 8:27:56 PM is 11
17-02-28 20:27:56.883 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:27:56.883 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:27:56.885 -08 000000100 INF: ===================Camera #0 Frame #107===================
17-02-28 20:27:56.892 -08 000000033 INF: Y Motor: Unshifted Position: 4069234
17-02-28 20:27:56.909 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:27:56.909 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:27:56.909 -08 000000091 INF: ===================Camera #2 Frame #108===================
17-02-28 20:27:56.942 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.053 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:27:57.053 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:27:57.053 -08 000000100 INF: ===================Camera #0 Frame #113===================
17-02-28 20:27:57.070 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.079 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:27:57.079 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:27:57.079 -08 000000091 INF: ===================Camera #2 Frame #114===================
17-02-28 20:27:57.205 -08 000000033 INF: Y Motor: Unshifted Position: 3865785
17-02-28 20:27:57.222 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:27:57.222 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:27:57.222 -08 000000100 INF: ===================Camera #0 Frame #119===================
17-02-28 20:27:57.248 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:27:57.248 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:27:57.248 -08 000000091 INF: ===================Camera #2 Frame #120===================
17-02-28 20:27:57.255 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.380 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.390 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:27:57.390 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:27:57.390 -08 000000100 INF: ===================Camera #0 Frame #126===================
17-02-28 20:27:57.417 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:27:57.417 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:27:57.417 -08 000000091 INF: ===================Camera #2 Frame #127===================
17-02-28 20:27:57.518 -08 000000033 INF: Y Motor: Unshifted Position: 3662117
17-02-28 20:27:57.561 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:27:57.561 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:27:57.561 -08 000000100 INF: ===================Camera #0 Frame #132===================
17-02-28 20:27:57.568 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.589 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:27:57.589 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:27:57.589 -08 000000091 INF: ===================Camera #2 Frame #133===================
17-02-28 20:27:57.692 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.729 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:27:57.729 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:27:57.729 -08 000000100 INF: ===================Camera #0 Frame #138===================
17-02-28 20:27:57.758 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:27:57.758 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:27:57.758 -08 000000091 INF: ===================Camera #2 Frame #139===================
17-02-28 20:27:57.828 -08 000000033 INF: Y Motor: Unshifted Position: 3460623
17-02-28 20:27:57.878 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:57.897 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:27:57.897 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:27:57.897 -08 000000100 INF: ===================Camera #0 Frame #144===================
17-02-28 20:27:57.927 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:27:57.927 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:27:57.927 -08 000000091 INF: ===================Camera #2 Frame #145===================
17-02-28 20:27:58.005 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.065 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:27:58.065 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:27:58.065 -08 000000100 INF: ===================Camera #0 Frame #150===================
17-02-28 20:27:58.096 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:27:58.096 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:27:58.096 -08 000000091 INF: ===================Camera #2 Frame #152===================
17-02-28 20:27:58.141 -08 000000033 INF: Y Motor: Unshifted Position: 3256959
17-02-28 20:27:58.191 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.233 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:27:58.233 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:27:58.233 -08 000000100 INF: ===================Camera #0 Frame #157===================
17-02-28 20:27:58.268 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:27:58.268 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:27:58.268 -08 000000091 INF: ===================Camera #2 Frame #158===================
17-02-28 20:27:58.315 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.404 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:27:58.404 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:27:58.404 -08 000000100 INF: ===================Camera #0 Frame #163===================
17-02-28 20:27:58.437 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:27:58.437 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:27:58.437 -08 000000091 INF: ===================Camera #2 Frame #164===================
17-02-28 20:27:58.452 -08 000000033 INF: Y Motor: Unshifted Position: 3054806
17-02-28 20:27:58.502 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.572 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:27:58.572 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:27:58.572 -08 000000100 INF: ===================Camera #0 Frame #169===================
17-02-28 20:27:58.606 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:27:58.606 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:27:58.606 -08 000000091 INF: ===================Camera #2 Frame #170===================
17-02-28 20:27:58.629 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.740 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:27:58.740 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:27:58.740 -08 000000100 INF: ===================Camera #0 Frame #175===================
17-02-28 20:27:58.765 -08 000000033 INF: Y Motor: Unshifted Position: 2851145
17-02-28 20:27:58.775 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:27:58.775 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:27:58.775 -08 000000091 INF: ===================Camera #2 Frame #177===================
17-02-28 20:27:58.815 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.908 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:27:58.908 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:27:58.908 -08 000000100 INF: ===================Camera #0 Frame #181===================
17-02-28 20:27:58.939 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:58.947 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:27:58.947 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:27:58.947 -08 000000091 INF: ===================Camera #2 Frame #183===================
17-02-28 20:27:59.076 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:27:59.076 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:27:59.076 -08 000000100 INF: ===================Camera #0 Frame #188===================
17-02-28 20:27:59.078 -08 000000033 INF: Y Motor: Unshifted Position: 2647478
17-02-28 20:27:59.116 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:27:59.116 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:27:59.116 -08 000000091 INF: ===================Camera #2 Frame #189===================
17-02-28 20:27:59.128 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:59.247 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:27:59.247 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:27:59.247 -08 000000100 INF: ===================Camera #0 Frame #194===================
17-02-28 20:27:59.252 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:59.285 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:27:59.285 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:27:59.285 -08 000000091 INF: ===================Camera #2 Frame #195===================
17-02-28 20:27:59.388 -08 000000033 INF: Y Motor: Unshifted Position: 2445984
17-02-28 20:27:59.415 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:27:59.415 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:27:59.415 -08 000000100 INF: ===================Camera #0 Frame #200===================
17-02-28 20:27:59.438 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:59.454 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:27:59.454 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:27:59.454 -08 000000091 INF: ===================Camera #2 Frame #202===================
17-02-28 20:27:59.565 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:59.583 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:27:59.583 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:27:59.583 -08 000000100 INF: ===================Camera #0 Frame #206===================
17-02-28 20:27:59.626 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:27:59.626 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:27:59.626 -08 000000091 INF: ===================Camera #2 Frame #208===================
17-02-28 20:27:59.701 -08 000000033 INF: Y Motor: Unshifted Position: 2242325
17-02-28 20:27:59.751 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:59.751 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:27:59.751 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:27:59.751 -08 000000100 INF: ===================Camera #0 Frame #213===================
17-02-28 20:27:59.795 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:27:59.795 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:27:59.795 -08 000000091 INF: ===================Camera #2 Frame #214===================
17-02-28 20:27:59.875 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:27:59.922 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:27:59.922 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:27:59.922 -08 000000100 INF: ===================Camera #0 Frame #219===================
17-02-28 20:27:59.964 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:27:59.964 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:27:59.964 -08 000000091 INF: ===================Camera #2 Frame #220===================
17-02-28 20:28:00.014 -08 000000033 INF: Y Motor: Unshifted Position: 2038869
17-02-28 20:28:00.064 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:00.090 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:28:00.090 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:28:00.090 -08 000000100 INF: ===================Camera #0 Frame #225===================
17-02-28 20:28:00.133 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:28:00.133 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:28:00.133 -08 000000091 INF: ===================Camera #2 Frame #227===================
17-02-28 20:28:00.188 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:00.258 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:28:00.258 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:28:00.258 -08 000000100 INF: ===================Camera #0 Frame #231===================
17-02-28 20:28:00.305 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:28:00.305 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:28:00.305 -08 000000091 INF: ===================Camera #2 Frame #233===================
17-02-28 20:28:00.324 -08 000000033 INF: Y Motor: Unshifted Position: 1837369
17-02-28 20:28:00.374 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:00.426 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:28:00.426 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:28:00.426 -08 000000100 INF: ===================Camera #0 Frame #237===================
17-02-28 20:28:00.474 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:28:00.474 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:28:00.474 -08 000000091 INF: ===================Camera #2 Frame #239===================
17-02-28 20:28:00.501 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:00.595 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:28:00.595 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:28:00.595 -08 000000100 INF: ===================Camera #0 Frame #244===================
17-02-28 20:28:00.638 -08 000000033 INF: Y Motor: Unshifted Position: 1632396
17-02-28 20:28:00.643 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:28:00.643 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:28:00.643 -08 000000091 INF: ===================Camera #2 Frame #245===================
17-02-28 20:28:00.688 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:00.766 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:28:00.766 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:28:00.766 -08 000000100 INF: ===================Camera #0 Frame #250===================
17-02-28 20:28:00.811 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:00.812 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:28:00.812 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:28:00.812 -08 000000091 INF: ===================Camera #2 Frame #252===================
17-02-28 20:28:00.934 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:28:00.934 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:28:00.934 -08 000000100 INF: ===================Camera #0 Frame #256===================
17-02-28 20:28:00.950 -08 000000033 INF: Y Motor: Unshifted Position: 1429377
17-02-28 20:28:00.984 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:28:00.984 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:28:00.984 -08 000000091 INF: ===================Camera #2 Frame #258===================
17-02-28 20:28:01.000 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:01.102 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:28:01.102 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:28:01.102 -08 000000100 INF: ===================Camera #0 Frame #262===================
17-02-28 20:28:01.125 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:01.156 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:28:01.156 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:28:01.156 -08 000000091 INF: ===================Camera #2 Frame #264===================
17-02-28 20:28:01.261 -08 000000033 INF: Y Motor: Unshifted Position: 1227645
17-02-28 20:28:01.270 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:28:01.270 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:28:01.270 -08 000000100 INF: ===================Camera #0 Frame #268===================
17-02-28 20:28:01.311 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:01.327 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:28:01.327 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:28:01.327 -08 000000091 INF: ===================Camera #2 Frame #271===================
17-02-28 20:28:01.383 -08 000000056 INF: FPGA: Recv TDIYWAIT
17-02-28 20:28:01.383 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:01.385 -08 000000037 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:28:01.386 -08 000000030 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:28:01.386 -08 000000086 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:28:01.386 -08 000000030 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:28:01.386 -08 000000030 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:28:01.386 -08 000000030 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:28:01.386 -08 000000086 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:28:01.386 -08 000000086 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:28:01.386 -08 000000086 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:28:01.386 -08 000000030 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:28:01.389 -08 000000086 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:28:01.435 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:01.440 -08 000000100 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:01.440 -08 000000100 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:01.440 -08 000000100 INF: ===================Camera #0 Frame #272===================
17-02-28 20:28:01.453 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:01.454 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:01.572 -08 000000033 INF: Y Motor: Unshifted Position: 1023769
17-02-28 20:28:01.585 -08 000000100 INF: Camera #0 ReleaseBuffer
17-02-28 20:28:01.585 -08 000000091 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:01.585 -08 000000091 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:01.585 -08 000000091 INF: ===================Camera #2 Frame #272===================
17-02-28 20:28:01.585 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:28:01.588 -08 000000091 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:01.589 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:01.615 -08 000000100 INF: ======================================
17-02-28 20:28:01.622 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:01.759 -08 000000091 INF: Camera #2 ReleaseBuffer
17-02-28 20:28:01.759 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:28:01.759 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:28:01.759 -08 000000086 INF: Excitation Filter 1: Moved 107 steps in 372.8578 ms
17-02-28 20:28:01.759 -08 000000030 INF: Excitation Filter 2: Moved 107 steps in 373.0235 ms
17-02-28 20:28:01.759 -08 000000086 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.9726 ms
17-02-28 20:28:01.759 -08 000000030 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.1148 ms
17-02-28 20:28:01.759 -08 000000030 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2265 ms
17-02-28 20:28:01.759 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:28:01.759 -08 000000086 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.0798 ms
17-02-28 20:28:01.759 -08 000000030 INF: ======================================
17-02-28 20:28:01.759 -08 000000086 INF: ======================================
17-02-28 20:28:01.761 -08 000000033 INF: Y Motor: Unshifted Position: 993200
17-02-28 20:28:01.761 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:01.761 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:01.761 -08 000000037 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:01.762 -08 000000037 INF: ======================================
17-02-28 20:28:01.793 -08 000000091 INF: ======================================
17-02-28 20:28:01.795 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:28:01.796 -08 000000047 INF: ======================================
17-02-28 20:28:01.823 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:01.823 -08 000000033 INF: Y Motor: Moved to 14.9320 after 7861 ms
17-02-28 20:28:01.823 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:01.885 -08 000000033 INF: Y Motor: Recv v 4097\r
17-02-28 20:28:01.885 -08 000000033 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:01.885 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:01.947 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:01.947 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:01.947 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:02.009 -08 000000033 INF: Y Motor: Recv v 134217728\r
17-02-28 20:28:02.009 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:28:02.009 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:02.009 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:02.073 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:02.073 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:02.073 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:02.073 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:02.137 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:02.137 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:02.137 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:02.198 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:02.198 -08 000000033 INF: ======================================
17-02-28 20:28:02.199 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:02.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:02.201 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.201 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:28:02.259 -08 000000037 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:28:02.259 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:02.322 -08 000000028 INF: FPGA: Recv TDIYERD 1493202
17-02-28 20:28:02.322 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:28:02.382 -08 000000062 INF: FPGA: Recv ZADCR 20930
17-02-28 20:28:02.382 -08 000000042 INF: At scan end Y pos = 14.932 and Z pos = -0.080. Y moved -48.539 mm
17-02-28 20:28:02.382 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:28:02.447 -08 000000039 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:28:02.447 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:28:02.447 -08 000000042 INF: TDIScan finished after 12813.9692 ms
17-02-28 20:28:02.447 -08 000000042 INF: Image[0]: Y should trigger at 63.471 mm, 2nd row was at 64.380 mm (error = 0.909 mm)
17-02-28 20:28:02.447 -08 000000042 INF: Image[2]: Y should trigger at 63.471 mm, 2nd row was at 64.380 mm (error = 0.909 mm)
17-02-28 20:28:02.449 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.484 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.468 um
17-02-28 20:28:02.484 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.485 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:28:02.506 -08 000000102 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:28:02.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.507 -08 000000077 INF: ===================Dither Clean Up Command===================
17-02-28 20:28:02.507 -08 000000080 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:28:02.507 -08 000000100 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:28:02.507 -08 000000034 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:28:02.507 -08 000000080 INF: ======================================
17-02-28 20:28:02.507 -08 000000034 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:28:02.508 -08 000000034 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:28:02.508 -08 000000100 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:02.508 -08 000000100 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:02.508 -08 000000028 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:02.508 -08 000000070 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:02.509 -08 000000028 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:28:02.511 -08 000000070 INF: ===================LFT:Extracting coords===================
17-02-28 20:28:02.537 -08 000000070 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:02.537 -08 000000070 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:28:02.538 -08 000000056 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.538 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.538 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.539 -08 000000056 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:02.539 -08 000000039 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:02.539 -08 000000074 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:02.539 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.540 -08 000000030 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:02.571 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:02.571 -08 000000051 INF: FPGA: Recv ZSEL 
17-02-28 20:28:02.571 -08 000000028 INF: FPGA: Xmit ZDACW 26298\n
17-02-28 20:28:02.571 -08 000000034 INF: ======================================
17-02-28 20:28:02.573 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:28:02.573 -08 000000100 INF: ======================================
17-02-28 20:28:02.613 -08 000000039 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:02.613 -08 000000056 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:02.613 -08 000000074 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:02.614 -08 000000030 INF: FC:B, C:3,L:3, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:02.635 -08 000000050 INF: FPGA: Recv ZDACW 
17-02-28 20:28:02.636 -08 000000028 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:28:02.636 -08 000000028 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:28:02.695 -08 000000060 INF: FPGA: Recv TDIBB
17-02-28 20:28:02.695 -08 000000028 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:02.696 -08 000000028 INF: ======================================
17-02-28 20:28:02.764 -08 000000039 INF: LFT found best fwhm score 2.000294 in 151 ms
17-02-28 20:28:02.764 -08 000000039 INF: LFT found good score at index 5253 with fwhm value 2.000294. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:3,B
17-02-28 20:28:02.764 -08 000000074 INF: LFT found best fwhm score 2.000205 in 151 ms
17-02-28 20:28:02.764 -08 000000074 INF: LFT found good score at index 5597 with fwhm value 2.000205. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:3,B
17-02-28 20:28:02.764 -08 000000039 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.764 -08 000000056 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:28:02.764 -08 000000074 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.764 -08 000000056 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0798667567219548 in the next cycle, cycle 4 FC:B, C:3,L:3,B
17-02-28 20:28:02.765 -08 000000039 INF: ======================================
17-02-28 20:28:02.765 -08 000000056 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.765 -08 000000074 INF: ======================================
17-02-28 20:28:02.765 -08 000000056 INF: ======================================
17-02-28 20:28:02.765 -08 000000030 INF: LFT found best fwhm score 2.000021 in 151 ms
17-02-28 20:28:02.765 -08 000000030 INF: LFT found good score at index 325 with fwhm value 2.000021. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:3,B
17-02-28 20:28:02.765 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:28:02.766 -08 000000030 INF: ======================================
17-02-28 20:28:02.766 -08 000000070 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:02.767 -08 000000070 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:3,B
17-02-28 20:28:02.767 -08 000000070 INF: ======================================
17-02-28 20:28:02.768 -08 000000077 INF: ======================================
17-02-28 20:28:02.769 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:28:02.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:28:02.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:28:02.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:28:02.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:02.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:28:02.772 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:28:02.772 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:28:02.773 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:28:02.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:28:02.773 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3, Swath 2 - X = 75.26618 Y = 39.78827===================
17-02-28 20:28:02.796 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:28:02.796 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:02.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:28:02.796 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:28:02.796 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:28:02.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 3===================
17-02-28 20:28:02.797 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:28:02.814 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:02.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:02.816 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:02.816 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:02.842 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":3,"Tile":2205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF239","HCSMMF268","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:02.887 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:02.888 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:02.888 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:28:02.888 -08 000000042 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:28:02.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:02.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:02.903 -08 000000074 INF: ===================Move Tilt Motor 1===================
17-02-28 20:28:02.904 -08 000000074 INF: ======================================
17-02-28 20:28:03.001 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":3,"Tile":2202,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF202","HCSMMF243","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.002 -08 000000037 INF: ===================Move Tilt Motor 2===================
17-02-28 20:28:03.002 -08 000000074 INF: ===================Move Tilt Motor 3===================
17-02-28 20:28:03.002 -08 000000037 INF: ======================================
17-02-28 20:28:03.003 -08 000000074 INF: ======================================
17-02-28 20:28:03.003 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":3,"Tile":2203,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF183","HCSMMF180","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.004 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:03.005 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":3,"Tile":2204,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF207","HCSMMF273","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.005 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:03.007 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":3,"Tile":2209,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF208","HCSMMF279","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.010 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":3,"Tile":2206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF221","HCSMMF201","HCSMMF197","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.014 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:28:03.019 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":3,"Tile":2201,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF213","HCSMMF237","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.021 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":3,"Tile":2214,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF275","HCSMMF251","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.024 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":3,"Tile":2212,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF196","HCSMMF254","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.025 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":3,"Tile":2215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF216","HCSMMF248","HCSMMF203","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.026 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":3,"Tile":2211,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF194","HCSMMF277","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.027 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:28:03.027 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:28:03.027 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:28:03.027 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:03.028 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:03.029 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":3,"Tile":2208,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF272","HCSMMF244","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.030 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":3,"Tile":2213,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF195","HCSMMF283","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.032 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":3,"Tile":2210,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF189","HCSMMF234","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.033 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:28:03.033 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":3,"Tile":2216,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF250","HCSMMF187","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.034 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:28:03.034 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:28:03.035 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":3,"Tile":2207,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF176","HCSMMF223","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.049 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":3,"Tile":2217,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF230","HCSMMF204","HCSMMF192"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.054 -08 000000056 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:03.055 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:03.056 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:28:03.056 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1003 mm
17-02-28 20:28:03.056 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:28:03.067 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":3,"Tile":2221,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF264","HCSMMF235","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.076 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":3,"Tile":2222,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF271","HCSMMF247","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.082 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":3,"Tile":2223,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF266","HCSMMF177","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.092 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":3,"Tile":2218,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF225","HCSMMF222","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.094 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":3,"Tile":2220,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF286","HCSMMF280","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.094 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":3,"Tile":2227,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF178","HCSMMF240","HCSMMF181","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.095 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":3,"Tile":2226,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF238","HCSMMF228","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.096 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":3,"Tile":2224,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF209","HCSMMF198","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.097 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":3,"Tile":2225,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF191","HCSMMF282","HCSMMF217","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.099 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":3,"Tile":2219,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF262","HCSMMF212","HCSMMF231","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.099 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 3 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":3,"Tile":2228,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF278","HCSMMF246","HCSMMF205","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:03.102 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:03.108 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:28:03.116 -08 000000108 INF: FPGA: Recv ZTRG 
17-02-28 20:28:03.116 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:28:03.178 -08 000000086 INF: FPGA: Recv ZYT 
17-02-28 20:28:03.178 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:28:03.178 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:28:03.188 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:03.188 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:28:03.227 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:03.232 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:28:03.240 -08 000000033 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:28:03.240 -08 000000033 INF: FPGA: Recv ZMV 
17-02-28 20:28:03.240 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:28:03.240 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.9926 ms
17-02-28 20:28:03.240 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:28:03.302 -08 000000090 INF: FPGA: Recv ZDACR 60292
17-02-28 20:28:03.302 -08 000000042 INF: Z Motor: MoveAndTrigger took 246.2142 ms w/comms
17-02-28 20:28:03.302 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:28:03.302 -08 000000042 INF: Z Motor: MoveAbsStepped took 246.3796 ms
17-02-28 20:28:03.302 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:03.303 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:28:03.311 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:28:03.311 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:03.311 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:03.311 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:28:03.311 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:28:03.318 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:03.324 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:28:03.364 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:03.375 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:03.376 -08 000000042 INF: Transformed XStagePosition from 77.48064 mm to 77.4806365966797 mm.
17-02-28 20:28:03.384 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:28:03.384 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:03.384 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:03.386 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:03.386 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:28:03.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:03.387 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = D_1
17-02-28 20:28:03.387 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:03.388 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:03.388 -08 000000069 INF: ===================MoveEmissionFilters===================
17-02-28 20:28:03.388 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:28:03.389 -08 000000080 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:03.389 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:03.389 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:03.389 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:03.390 -08 000000108 INF: ===================Move X,Y, Parallel===================
17-02-28 20:28:03.390 -08 000000080 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:03.390 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:03.390 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:03.391 -08 000000068 INF: ===================Move X Motor without settling===================
17-02-28 20:28:03.391 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:03.391 -08 000000028 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:03.391 -08 000000068 INF: X Motor: Xmit PR VM\n
17-02-28 20:28:03.391 -08 000000028 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9320 mm
17-02-28 20:28:03.391 -08 000000028 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:03.391 -08 000000028 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:03.391 -08 000000034 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:28:03.391 -08 000000100 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:28:03.391 -08 000000070 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:28:03.391 -08 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:28:03.391 -08 000000082 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:28:03.391 -08 000000105 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:28:03.392 -08 000000034 INF: ======================================
17-02-28 20:28:03.392 -08 000000030 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:28:03.392 -08 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:28:03.392 -08 000000030 INF: ======================================
17-02-28 20:28:03.392 -08 000000105 INF: ======================================
17-02-28 20:28:03.392 -08 000000100 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:28:03.392 -08 000000070 INF: ======================================
17-02-28 20:28:03.393 -08 000000100 INF: ======================================
17-02-28 20:28:03.393 -08 000000086 INF: ======================================
17-02-28 20:28:03.393 -08 000000037 INF: ======================================
17-02-28 20:28:03.394 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:03.394 -08 000000080 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:03.395 -08 000000082 INF: ======================================
17-02-28 20:28:03.395 -08 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:03.395 -08 000000106 INF: ======================================
17-02-28 20:28:03.395 -08 000000080 INF: ======================================
17-02-28 20:28:03.396 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:03.396 -08 000000029 INF: ======================================
17-02-28 20:28:03.397 -08 000000073 INF: ======================================
17-02-28 20:28:03.398 -08 000000069 INF: ======================================
17-02-28 20:28:03.407 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:03.413 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:28:03.431 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:28:03.431 -08 000000028 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:03.431 -08 000000028 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:03.433 -08 000000068 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:28:03.433 -08 000000068 INF: X Motor: Xmit PR VI\n
17-02-28 20:28:03.493 -08 000000068 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:28:03.493 -08 000000068 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:28:03.493 -08 000000068 INF: X Motor: Moving to 77.4806 mm @15.000 mm/sec, started at 75.2402 mm
17-02-28 20:28:03.493 -08 000000068 INF: X Motor: Xmit MA 7570\n
17-02-28 20:28:03.495 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:28:03.495 -08 000000028 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:03.498 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:03.555 -08 000000028 INF: Y Motor: Recv v 0\r
17-02-28 20:28:03.555 -08 000000028 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:03.555 -08 000000068 INF: X Motor: Recv MA 7570\r\n>
17-02-28 20:28:03.555 -08 000000028 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:28:03.555 -08 000000028 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:28:03.555 -08 000000068 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:28:03.617 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:28:03.617 -08 000000028 INF: Y Motor: Start the move command
17-02-28 20:28:03.617 -08 000000028 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:03.679 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:28:03.679 -08 000000028 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:28:03.679 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:03.785 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:28:03.803 -08 000000028 INF: Y Motor: Unshifted Position: 1076781
17-02-28 20:28:03.853 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:03.981 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:04.125 -08 000000028 INF: Y Motor: Unshifted Position: 1787351
17-02-28 20:28:04.175 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:04.178 -08 000000068 INF: X Motor: Xmit PR ER\n
17-02-28 20:28:04.240 -08 000000068 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:28:04.240 -08 000000068 INF: X Motor: Moved to 77.4814 after 685 ms
17-02-28 20:28:04.240 -08 000000068 INF: ======================================
17-02-28 20:28:04.290 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:04.427 -08 000000028 INF: Y Motor: Unshifted Position: 2565728
17-02-28 20:28:04.477 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:04.606 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:04.741 -08 000000028 INF: Y Motor: Unshifted Position: 3338164
17-02-28 20:28:04.791 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:04.915 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.051 -08 000000028 INF: Y Motor: Unshifted Position: 4125733
17-02-28 20:28:05.101 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.229 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.365 -08 000000028 INF: Y Motor: Unshifted Position: 4901505
17-02-28 20:28:05.415 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.538 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.678 -08 000000028 INF: Y Motor: Unshifted Position: 5677655
17-02-28 20:28:05.728 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.851 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:05.987 -08 000000028 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:28:05.987 -08 000000028 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:05.987 -08 000000028 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:06.050 -08 000000028 INF: Y Motor: Recv v 0\r
17-02-28 20:28:06.050 -08 000000028 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:28:06.050 -08 000000028 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:06.112 -08 000000028 INF: Y Motor: Recv v 4096\r
17-02-28 20:28:06.112 -08 000000028 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:06.112 -08 000000028 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:06.174 -08 000000028 INF: Y Motor: Recv v 0\r
17-02-28 20:28:06.174 -08 000000028 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:06.174 -08 000000028 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:06.238 -08 000000028 INF: Y Motor: Recv v 402653184\r
17-02-28 20:28:06.238 -08 000000028 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:28:06.238 -08 000000028 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:06.238 -08 000000028 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:06.301 -08 000000028 INF: Y Motor: Recv v 0\r
17-02-28 20:28:06.301 -08 000000028 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:06.301 -08 000000028 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:06.301 -08 000000028 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:06.364 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:28:06.364 -08 000000028 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:06.364 -08 000000028 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:06.428 -08 000000028 INF: Y Motor: Recv ok\r
17-02-28 20:28:06.428 -08 000000028 INF: ======================================
17-02-28 20:28:06.429 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:28:06.430 -08 000000108 INF: ======================================
17-02-28 20:28:06.431 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:06.432 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:06.432 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:28:06.432 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:28:06.487 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:06.487 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:28:06.548 -08 000000060 INF: FPGA: Recv ZFREQCL
17-02-28 20:28:06.548 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:28:06.548 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:06.549 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:06.633 -08 000000047 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:28:06.633 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:28:06.633 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:06.634 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:06.635 -08 000000108 INF: ===================Set YMotor gains for scans===================
17-02-28 20:28:06.635 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:06.635 -08 000000108 INF: ======================================
17-02-28 20:28:06.636 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:28:06.636 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:06.638 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:28:06.638 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:28:06.639 -08 000000087 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:28:06.688 -08 000000084 INF: FPGA: Recv TDIYPOS
17-02-28 20:28:06.688 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:28:06.690 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:28:06.690 -08 000000087 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:28:06.750 -08 000000047 INF: FPGA: Recv TDIYARM2
17-02-28 20:28:06.750 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:28:06.752 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:06.753 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:28:06.754 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:06.755 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:28:06.756 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:28:06.757 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:07.125 -08 000000087 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:28:07.125 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:28:07.125 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:07.141 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:28:07.142 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:07.534 -08 000000087 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:28:07.534 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:28:07.534 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:07.549 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:28:07.550 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:28:07.552 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:07.553 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:07.554 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:28:07.554 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:07.556 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:28:07.556 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:28:07.556 -08 000000087 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:28:07.556 -08 000000087 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:28:07.625 -08 000000108 INF: FPGA: Recv ZYT 
17-02-28 20:28:07.625 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:28:07.625 -08 000000087 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:28:07.687 -08 000000033 INF: FPGA: Recv ZARM
17-02-28 20:28:07.687 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.21 ms
17-02-28 20:28:07.687 -08 000000087 INF: Z Motor: ArmAbsStepped took 131.6998 ms
17-02-28 20:28:07.688 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:07.689 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:07.690 -08 000000087 INF: ======================================
17-02-28 20:28:07.691 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:07.693 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:07.693 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:07.694 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:07.695 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:07.696 -08 000000105 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:28:07.696 -08 000000051 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:28:07.696 -08 000000105 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:28:07.696 -08 000000105 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:28:07.696 -08 000000105 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:28:07.697 -08 000000051 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:28:07.697 -08 000000105 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:28:07.697 -08 000000051 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:28:07.697 -08 000000051 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:28:07.698 -08 000000051 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:28:08.062 -08 000000050 INF: FPGA: Recv EX2MV
17-02-28 20:28:08.062 -08 000000105 INF: Excitation Filter 2: Moved -107 steps in 365.4271 ms
17-02-28 20:28:08.062 -08 000000105 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.5879 ms
17-02-28 20:28:08.062 -08 000000105 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.8217 ms
17-02-28 20:28:08.062 -08 000000105 INF: ======================================
17-02-28 20:28:08.124 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:28:08.124 -08 000000051 INF: Excitation Filter 1: Moved -107 steps in 427.4143 ms
17-02-28 20:28:08.124 -08 000000051 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 427.5937 ms
17-02-28 20:28:08.124 -08 000000051 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 427.6918 ms
17-02-28 20:28:08.125 -08 000000051 INF: ======================================
17-02-28 20:28:08.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:08.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:08.128 -08 000000039 INF: ===================Serial===================
17-02-28 20:28:08.128 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:28:08.128 -08 000000087 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:08.128 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:08.128 -08 000000087 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:28:08.129 -08 000000087 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:08.129 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:08.129 -08 000000039 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:28:08.129 -08 000000039 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:28:08.129 -08 000000050 INF: ===================Camera TDI, Parallel===================
17-02-28 20:28:08.129 -08 000000069 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:28:08.130 -08 000000069 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:28:08.130 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:28:08.130 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:28:08.131 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.131 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.131 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.132 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.188 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:28:08.188 -08 000000087 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:08.188 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:08.250 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:28:08.250 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:08.281 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.281 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.282 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.282 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.312 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:28:08.312 -08 000000087 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:08.312 -08 000000087 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:28:08.312 -08 000000087 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:28:08.375 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:28:08.375 -08 000000087 INF: Y Motor: Start the move command
17-02-28 20:28:08.375 -08 000000087 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:08.431 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.431 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.432 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.432 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.439 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:28:08.439 -08 000000087 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:28:08.439 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:08.565 -08 000000087 INF: Y Motor: Unshifted Position: 5935132
17-02-28 20:28:08.581 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.581 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.582 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:08.582 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:08.615 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:08.731 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:28:08.731 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:28:08.731 -08 000000029 INF: ===================Camera #0 Frame #1===================
17-02-28 20:28:08.732 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:28:08.732 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:28:08.732 -08 000000070 INF: ===================Camera #2 Frame #1===================
17-02-28 20:28:08.738 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:08.874 -08 000000087 INF: Y Motor: Unshifted Position: 5888333
17-02-28 20:28:08.886 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:28:08.886 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:28:08.886 -08 000000029 INF: ===================Camera #0 Frame #3===================
17-02-28 20:28:08.887 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:28:08.887 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:28:08.887 -08 000000070 INF: ===================Camera #2 Frame #3===================
17-02-28 20:28:08.924 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:09.042 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:28:09.042 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:28:09.042 -08 000000029 INF: ===================Camera #0 Frame #4===================
17-02-28 20:28:09.043 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:28:09.043 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:28:09.043 -08 000000070 INF: ===================Camera #2 Frame #4===================
17-02-28 20:28:09.048 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:09.187 -08 000000087 INF: Y Motor: Unshifted Position: 5841372
17-02-28 20:28:09.197 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:09.197 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:09.197 -08 000000029 INF: ===================Camera #0 Frame #5===================
17-02-28 20:28:09.198 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:09.198 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:09.198 -08 000000070 INF: ===================Camera #2 Frame #5===================
17-02-28 20:28:09.237 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:09.247 -08 000000074 INF: FPGA: Recv ZWAIT 
17-02-28 20:28:09.247 -08 000000074 INF: FPGA: Recv TDIYWAIT
17-02-28 20:28:09.248 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:09.248 -08 000000039 INF: ===================Serial===================
17-02-28 20:28:09.249 -08 000000039 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:28:09.250 -08 000000039 INF: ===================Serial===================
17-02-28 20:28:09.250 -08 000000069 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:28:09.251 -08 000000039 INF: ======================================
17-02-28 20:28:09.252 -08 000000091 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:28:09.252 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:28:09.252 -08 000000091 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:28:09.252 -08 000000091 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:28:09.252 -08 000000091 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:28:09.252 -08 000000091 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:28:09.252 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:28:09.252 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:28:09.252 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:28:09.253 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:28:09.351 -08 000000029 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:28:09.351 -08 000000029 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:28:09.351 -08 000000029 INF: ===================Camera #0 Frame #6===================
17-02-28 20:28:09.353 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:28:09.353 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:28:09.353 -08 000000070 INF: ===================Camera #2 Frame #6===================
17-02-28 20:28:09.355 -08 000000029 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:28:09.356 -08 000000029 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:09.356 -08 000000070 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:28:09.357 -08 000000070 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:09.361 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:09.380 -08 000000029 INF: Camera #0 ReleaseBuffer
17-02-28 20:28:09.380 -08 000000029 INF: ===================Camera TDI===================
17-02-28 20:28:09.381 -08 000000029 INF: ======================================
17-02-28 20:28:09.404 -08 000000070 INF: Camera #2 ReleaseBuffer
17-02-28 20:28:09.404 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:28:09.405 -08 000000070 INF: ======================================
17-02-28 20:28:09.407 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:28:09.408 -08 000000050 INF: ======================================
17-02-28 20:28:09.500 -08 000000087 INF: Y Motor: Unshifted Position: 5797057
17-02-28 20:28:09.550 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:09.622 -08 000000084 INF: FPGA: Recv EX1MV
17-02-28 20:28:09.622 -08 000000084 INF: FPGA: Recv EX2MV
17-02-28 20:28:09.622 -08 000000091 INF: Excitation Filter 1: Moved 107 steps in 370.0119 ms
17-02-28 20:28:09.622 -08 000000091 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 370.1571 ms
17-02-28 20:28:09.622 -08 000000091 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 370.2518 ms
17-02-28 20:28:09.622 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 369.8017 ms
17-02-28 20:28:09.622 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.2305 ms
17-02-28 20:28:09.622 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.3335 ms
17-02-28 20:28:09.623 -08 000000091 INF: ======================================
17-02-28 20:28:09.623 -08 000000051 INF: ======================================
17-02-28 20:28:09.624 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:09.625 -08 000000069 INF: ======================================
17-02-28 20:28:09.686 -08 000000087 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:28:09.686 -08 000000087 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:09.686 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:09.748 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:28:09.748 -08 000000087 INF: Y Motor: Moved to 62.9704 after 1309 ms
17-02-28 20:28:09.748 -08 000000087 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:09.810 -08 000000087 INF: Y Motor: Recv v 4097\r
17-02-28 20:28:09.810 -08 000000087 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:09.810 -08 000000087 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:09.872 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:28:09.872 -08 000000087 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:09.872 -08 000000087 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:09.934 -08 000000087 INF: Y Motor: Recv v 134217728\r
17-02-28 20:28:09.934 -08 000000087 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:28:09.934 -08 000000087 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:09.934 -08 000000087 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:09.999 -08 000000087 INF: Y Motor: Recv v 0\r
17-02-28 20:28:09.999 -08 000000087 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:09.999 -08 000000087 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:09.999 -08 000000087 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:10.061 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:28:10.061 -08 000000087 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:10.061 -08 000000087 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:10.123 -08 000000087 INF: Y Motor: Recv ok\r
17-02-28 20:28:10.123 -08 000000087 INF: ======================================
17-02-28 20:28:10.124 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:10.125 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:10.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.126 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:28:10.183 -08 000000077 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:28:10.183 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:10.245 -08 000000084 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:28:10.245 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:28:10.307 -08 000000105 INF: FPGA: Recv ZADCR 2420
17-02-28 20:28:10.307 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:28:10.307 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:28:10.370 -08 000000106 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:28:10.370 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:28:10.370 -08 000000042 INF: TDIScan finished after 6993.6524 ms
17-02-28 20:28:10.370 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:28:10.370 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:28:10.371 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:28:10.434 -08 000000074 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:28:10.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.436 -08 000000087 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:28:10.436 -08 000000032 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:28:10.436 -08 000000038 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:28:10.436 -08 000000087 INF: ======================================
17-02-28 20:28:10.437 -08 000000038 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:10.437 -08 000000038 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:10.437 -08 000000032 INF: ======================================
17-02-28 20:28:10.497 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:28:10.497 -08 000000038 INF: ======================================
17-02-28 20:28:10.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.500 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:28:10.548 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.548 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:28:10.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:28:10.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.678 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:28:10.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:10.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:10.745 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:10.746 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:28:10.753 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:28:10.754 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:28:11.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1, Selecting focus point===================
17-02-28 20:28:11.461 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0804633831022333Best Z position at top surface = -0.151802327055185Best Z position at top surface + compensator offset = -0.129102327055185 C:3,L:4,B
17-02-28 20:28:11.462 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.151802327055185
17-02-28 20:28:11.462 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.93726
17-02-28 20:28:11.462 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0804633831022333
17-02-28 20:28:11.462 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59398
17-02-28 20:28:11.462 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0804633831022333.
17-02-28 20:28:11.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:11.595 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:28:11.595 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:28:11.617 -08 000000087 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Focus Point 1===================
17-02-28 20:28:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.619 -08 000000042 INF: Lane 4, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:28:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.620 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.620 -08 000000062 INF: ===================Move Tilt Motor 1===================
17-02-28 20:28:11.620 -08 000000091 INF: ===================Move Tilt Motor 2===================
17-02-28 20:28:11.620 -08 000000050 INF: ===================Move Tilt Motor 3===================
17-02-28 20:28:11.621 -08 000000062 INF: ======================================
17-02-28 20:28:11.621 -08 000000050 INF: ======================================
17-02-28 20:28:11.621 -08 000000091 INF: ======================================
17-02-28 20:28:11.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.622 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.623 -08 000000042 INF: ETF Best Z: -0.08046338 mm (21093 DAC)
17-02-28 20:28:11.623 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.624 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:28:11.624 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.625 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:11.631 -08 000000042 INF: Swath 1 position calculated to be: {X=76.92318, Y=39.78827} from estimated center X= 77.44199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:28:11.631 -08 000000042 INF: Swath 2 position calculated to be: {X=78.03118, Y=39.78827} from estimated center X= 77.44199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:28:12.032 -08 000000042 INF: Swath 0: Converted transform from (-42.04793, 3.407647) pixels to (-0.01449, 0.001035) mm.
17-02-28 20:28:12.040 -08 000000042 INF: Swath 1: Converted transform from (-65.78519, 1.95159) pixels to (-0.02277, 0.00069) mm.
17-02-28 20:28:12.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:28:12.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:28:12.042 -08 000000042 INF: Transformed XStagePosition from 76.92318 mm to 76.9086896264926 mm.
17-02-28 20:28:12.054 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5793128014784 mm.
17-02-28 20:28:12.054 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3793128014784 mm.
17-02-28 20:28:12.054 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4700628014784 mm.
17-02-28 20:28:12.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:12.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:28:12.056 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:12.056 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = D_1
17-02-28 20:28:12.064 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:12.065 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:12.066 -08 000000056 INF: ===================MoveEmissionFilters===================
17-02-28 20:28:12.066 -08 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:12.066 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:28:12.066 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:12.066 -08 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:28:12.066 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:12.066 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:12.067 -08 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:12.067 -08 000000108 INF: ===================Move X,Y, Parallel===================
17-02-28 20:28:12.067 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:12.067 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:12.067 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:12.067 -08 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:12.068 -08 000000050 INF: ===================Move X Motor without settling===================
17-02-28 20:28:12.068 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:12.068 -08 000000050 INF: X Motor: Xmit PR VM\n
17-02-28 20:28:12.068 -08 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:28:12.068 -08 000000105 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:28:12.068 -08 000000099 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:28:12.068 -08 000000100 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:28:12.068 -08 000000090 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:28:12.068 -08 000000091 INF: Y Motor: Moving to 64.5793 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:28:12.068 -08 000000030 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:28:12.068 -08 000000028 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:28:12.068 -08 000000105 INF: ======================================
17-02-28 20:28:12.069 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:12.069 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:12.069 -08 000000090 INF: ======================================
17-02-28 20:28:12.069 -08 000000102 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:28:12.069 -08 000000102 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:28:12.069 -08 000000086 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:28:12.069 -08 000000086 INF: Z Motor: Moving to -0.1005 mm, started at -0.0100 mm
17-02-28 20:28:12.069 -08 000000102 INF: ======================================
17-02-28 20:28:12.069 -08 000000086 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:28:12.070 -08 000000028 INF: ======================================
17-02-28 20:28:12.070 -08 000000099 INF: ======================================
17-02-28 20:28:12.071 -08 000000047 INF: ======================================
17-02-28 20:28:12.071 -08 000000100 INF: ======================================
17-02-28 20:28:12.072 -08 000000030 INF: ======================================
17-02-28 20:28:12.072 -08 000000087 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:12.072 -08 000000070 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:12.073 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:12.073 -08 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:12.073 -08 000000087 INF: ======================================
17-02-28 20:28:12.074 -08 000000070 INF: ======================================
17-02-28 20:28:12.074 -08 000000036 INF: ======================================
17-02-28 20:28:12.074 -08 000000060 INF: ======================================
17-02-28 20:28:12.075 -08 000000056 INF: ======================================
17-02-28 20:28:12.088 -08 000000078 INF: FPGA: Recv ZTRG 
17-02-28 20:28:12.088 -08 000000086 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:28:12.151 -08 000000100 INF: FPGA: Recv ZYT 
17-02-28 20:28:12.151 -08 000000086 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:28:12.151 -08 000000086 INF: FPGA: Xmit ZMV 26335\n
17-02-28 20:28:12.152 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:28:12.152 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:12.152 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:12.152 -08 000000050 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:28:12.152 -08 000000050 INF: X Motor: Xmit PR VI\n
17-02-28 20:28:12.212 -08 000000074 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:28:12.212 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:28:12.214 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:28:12.214 -08 000000050 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:28:12.214 -08 000000050 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:28:12.214 -08 000000050 INF: X Motor: Moving to 76.9087 mm @15.000 mm/sec, started at 77.4814 mm
17-02-28 20:28:12.214 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:12.214 -08 000000050 INF: X Motor: Xmit MA 7335\n
17-02-28 20:28:12.274 -08 000000030 INF: FPGA: Recv ZMV 
17-02-28 20:28:12.274 -08 000000086 INF: Z Motor: MoveAndTrigger 'ZMV' command took 122.8739 ms
17-02-28 20:28:12.274 -08 000000086 INF: FPGA: Xmit ZDACR\n
17-02-28 20:28:12.276 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:28:12.276 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:12.276 -08 000000050 INF: X Motor: Recv MA 7335\r\n>
17-02-28 20:28:12.276 -08 000000091 INF: Y Motor: Set target position to 5957931 encoder counts
17-02-28 20:28:12.276 -08 000000091 INF: Y Motor: Xmit s r0xca 5957931\r
17-02-28 20:28:12.276 -08 000000050 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:28:12.337 -08 000000062 INF: FPGA: Recv ZDACR 26335
17-02-28 20:28:12.337 -08 000000086 INF: Z Motor: MoveAndTrigger took 267.546 ms w/comms
17-02-28 20:28:12.337 -08 000000086 INF: Z Motor: After move to -0.1005, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:28:12.337 -08 000000086 INF: Z Motor: MoveAbsStepped took 267.7133 ms
17-02-28 20:28:12.337 -08 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:12.339 -08 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:28:12.340 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:28:12.340 -08 000000070 INF: ===================Camera Arm TDI===================
17-02-28 20:28:12.340 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:12.340 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:28:12.340 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:12.340 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:12.341 -08 000000070 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:12.341 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:12.342 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:12.342 -08 000000070 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:12.342 -08 000000087 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:28:12.399 -08 000000080 INF: FPGA: Recv ZSEL 
17-02-28 20:28:12.399 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:12.400 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:28:12.400 -08 000000087 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:28:12.400 -08 000000091 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:28:12.400 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:12.460 -08 000000078 INF: FPGA: Recv TDIBB
17-02-28 20:28:12.460 -08 000000087 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:12.461 -08 000000087 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:12.462 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:12.463 -08 000000087 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:28:12.463 -08 000000087 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:28:12.463 -08 000000087 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:28:12.523 -08 000000051 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:12.523 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:12.525 -08 000000091 INF: Y Motor: Unshifted Position: 5876017
17-02-28 20:28:12.525 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:28:12.525 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:12.527 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:28:12.527 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:28:12.527 -08 000000087 INF: Z Motor: Arming to move to -0.0605 mm
17-02-28 20:28:12.527 -08 000000087 INF: FPGA: Xmit ZYT 6437931 4\n
17-02-28 20:28:12.575 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:12.585 -08 000000039 INF: FPGA: Recv ZYT 
17-02-28 20:28:12.585 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6376017 enc / 63.760 mm / ) = 6437931 enc / 64.379 mm
17-02-28 20:28:12.585 -08 000000087 INF: FPGA: Xmit ZARM 15850\n
17-02-28 20:28:12.647 -08 000000100 INF: FPGA: Recv ZARM
17-02-28 20:28:12.647 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9986 ms
17-02-28 20:28:12.647 -08 000000087 INF: Z Motor: ArmAbsStepped took 119.8918 ms
17-02-28 20:28:12.647 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:12.649 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:12.650 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:28:12.651 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:12.652 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:28:12.652 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:28:12.654 -08 000000087 INF: ======================================
17-02-28 20:28:12.699 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:12.711 -08 000000050 INF: X Motor: Xmit PR ER\n
17-02-28 20:28:12.773 -08 000000050 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:28:12.773 -08 000000050 INF: X Motor: Moved to 76.9077 after 497 ms
17-02-28 20:28:12.773 -08 000000050 INF: ======================================
17-02-28 20:28:12.838 -08 000000091 INF: Y Motor: Unshifted Position: 5957932
17-02-28 20:28:12.838 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:12.838 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:12.900 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:28:12.900 -08 000000091 INF: Y Motor: Moved to 64.5793 after 500 ms
17-02-28 20:28:12.900 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:12.962 -08 000000091 INF: Y Motor: Recv v 4096\r
17-02-28 20:28:12.962 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:12.962 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:13.024 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:28:13.024 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:13.024 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:13.086 -08 000000091 INF: Y Motor: Recv v 402653184\r
17-02-28 20:28:13.086 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:28:13.086 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:13.086 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:13.148 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:28:13.148 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:13.148 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:13.148 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:13.210 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:28:13.210 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:13.210 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:13.267 -08 000000070 INF: Camera #0 AttachBuffer (imageDataPtr = 56929357872 imgPtr = 56929357872 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:13.267 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:13.267 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:13.275 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:28:13.275 -08 000000091 INF: ======================================
17-02-28 20:28:13.276 -08 000000108 INF: ===================Move X,Y===================
17-02-28 20:28:13.277 -08 000000108 INF: ======================================
17-02-28 20:28:13.282 -08 000000070 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:13.284 -08 000000070 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:14.310 -08 000000070 INF: Camera #2 AttachBuffer (imageDataPtr = 58741297200 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:14.311 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:14.311 -08 000000070 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:14.327 -08 000000070 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:14.328 -08 000000070 INF: ===================Camera Arm TDI===================
17-02-28 20:28:14.329 -08 000000070 INF: ======================================
17-02-28 20:28:14.331 -08 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:14.332 -08 000000086 INF: ======================================
17-02-28 20:28:14.333 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:14.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:14.334 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:28:14.334 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:28:14.397 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:14.397 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:28:14.457 -08 000000080 INF: FPGA: Recv ZFREQCL
17-02-28 20:28:14.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:28:14.457 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:14.457 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:14.519 -08 000000099 INF: FPGA: Recv TDIYERD 6457932
17-02-28 20:28:14.519 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457932 counts (64.579 mm)
17-02-28 20:28:14.519 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:14.520 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:14.520 -08 000000032 INF: ===================Set YMotor gains for scans===================
17-02-28 20:28:14.520 -08 000000029 INF: ===================TDI FPGA Arm===================
17-02-28 20:28:14.521 -08 000000032 INF: ======================================
17-02-28 20:28:14.521 -08 000000029 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:14.522 -08 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:28:14.523 -08 000000029 INF: FPGA: Xmit TDIYPOS 6347006\n
17-02-28 20:28:14.581 -08 000000087 INF: FPGA: Recv TDIYPOS
17-02-28 20:28:14.581 -08 000000029 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:14.583 -08 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:28:14.583 -08 000000029 INF: FPGA: Xmit TDIYARM3 139264 6437931 1 1\n
17-02-28 20:28:14.643 -08 000000082 INF: FPGA: Recv TDIYARM3
17-02-28 20:28:14.643 -08 000000029 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:14.644 -08 000000029 INF: ===================TDI FPGA Arm===================
17-02-28 20:28:14.645 -08 000000029 INF: ======================================
17-02-28 20:28:14.646 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:14.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:14.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:14.647 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:14.648 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:14.649 -08 000000060 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:28:14.649 -08 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:28:14.649 -08 000000060 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:28:14.649 -08 000000060 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:28:14.649 -08 000000060 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:28:14.649 -08 000000034 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:28:14.649 -08 000000034 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:28:14.649 -08 000000034 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:28:14.649 -08 000000060 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:28:14.650 -08 000000034 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:28:15.018 -08 000000084 INF: FPGA: Recv EX2MV
17-02-28 20:28:15.018 -08 000000084 INF: FPGA: Recv EX1MV
17-02-28 20:28:15.018 -08 000000034 INF: Excitation Filter 1: Moved -107 steps in 368.8113 ms
17-02-28 20:28:15.018 -08 000000034 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.8999 ms
17-02-28 20:28:15.018 -08 000000060 INF: Excitation Filter 2: Moved -107 steps in 368.9816 ms
17-02-28 20:28:15.018 -08 000000060 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0847 ms
17-02-28 20:28:15.018 -08 000000060 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.1569 ms
17-02-28 20:28:15.018 -08 000000034 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.9737 ms
17-02-28 20:28:15.018 -08 000000060 INF: ======================================
17-02-28 20:28:15.018 -08 000000034 INF: ======================================
17-02-28 20:28:15.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:15.020 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:15.021 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:28:15.021 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:15.021 -08 000000105 INF: ===================FPGA Z Wait===================
17-02-28 20:28:15.021 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:15.021 -08 000000105 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:28:15.022 -08 000000030 INF: Y Motor: Moving to 14.9310 mm @6.500 mm/sec, started at 64.5793 mm
17-02-28 20:28:15.022 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:15.022 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:15.022 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:28:15.022 -08 000000077 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:28:15.023 -08 000000077 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:28:15.023 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:28:15.023 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:28:15.024 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:15.024 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:15.025 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:15.025 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:15.082 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:28:15.082 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:15.082 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:15.147 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:28:15.147 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:15.174 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:15.174 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:15.175 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:15.175 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:15.209 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:28:15.209 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:15.209 -08 000000030 INF: Y Motor: Set target position to 993098 encoder counts
17-02-28 20:28:15.209 -08 000000030 INF: Y Motor: Xmit s r0xca 993098\r
17-02-28 20:28:15.271 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:28:15.271 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:28:15.271 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:15.324 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:15.324 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:15.325 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:15.325 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:15.333 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:28:15.333 -08 000000030 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:28:15.333 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:15.393 -08 000000074 INF: FPGA: Recv ZWAIT 
17-02-28 20:28:15.393 -08 000000105 INF: ======================================
17-02-28 20:28:15.457 -08 000000030 INF: Y Motor: Unshifted Position: 5896081
17-02-28 20:28:15.474 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:28:15.474 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:28:15.474 -08 000000050 INF: ===================Camera #0 Frame #4===================
17-02-28 20:28:15.475 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:28:15.475 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:28:15.475 -08 000000070 INF: ===================Camera #2 Frame #4===================
17-02-28 20:28:15.507 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:15.631 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:15.638 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 9, frameCount = 10.
17-02-28 20:28:15.638 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 10
17-02-28 20:28:15.638 -08 000000050 INF: ===================Camera #0 Frame #10===================
17-02-28 20:28:15.639 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:28:15.639 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:28:15.639 -08 000000070 INF: ===================Camera #2 Frame #11===================
17-02-28 20:28:15.770 -08 000000030 INF: Y Motor: Unshifted Position: 5692628
17-02-28 20:28:15.808 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:28:15.808 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:28:15.808 -08 000000050 INF: ===================Camera #0 Frame #17===================
17-02-28 20:28:15.814 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:28:15.814 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:28:15.814 -08 000000070 INF: ===================Camera #2 Frame #17===================
17-02-28 20:28:15.820 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:15.944 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:15.981 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:28:15.981 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:28:15.981 -08 000000050 INF: ===================Camera #0 Frame #23===================
17-02-28 20:28:15.985 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:28:15.985 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:28:15.985 -08 000000070 INF: ===================Camera #2 Frame #23===================
17-02-28 20:28:16.084 -08 000000030 INF: Y Motor: Unshifted Position: 5490919
17-02-28 20:28:16.134 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:16.151 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:28:16.151 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:28:16.151 -08 000000050 INF: ===================Camera #0 Frame #29===================
17-02-28 20:28:16.156 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:28:16.156 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:28:16.156 -08 000000070 INF: ===================Camera #2 Frame #30===================
17-02-28 20:28:16.257 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:16.322 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:28:16.322 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:28:16.322 -08 000000050 INF: ===================Camera #0 Frame #36===================
17-02-28 20:28:16.331 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:28:16.331 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:28:16.331 -08 000000070 INF: ===================Camera #2 Frame #36===================
17-02-28 20:28:16.394 -08 000000030 INF: Y Motor: Unshifted Position: 5287463
17-02-28 20:28:16.444 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:16.496 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:28:16.496 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:28:16.496 -08 000000050 INF: ===================Camera #0 Frame #42===================
17-02-28 20:28:16.502 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:28:16.502 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:28:16.502 -08 000000070 INF: ===================Camera #2 Frame #42===================
17-02-28 20:28:16.568 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:16.666 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:28:16.666 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:28:16.666 -08 000000050 INF: ===================Camera #0 Frame #48===================
17-02-28 20:28:16.673 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:28:16.673 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:28:16.673 -08 000000070 INF: ===================Camera #2 Frame #49===================
17-02-28 20:28:16.705 -08 000000030 INF: Y Motor: Unshifted Position: 5085094
17-02-28 20:28:16.755 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:16.836 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:28:16.836 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:28:16.836 -08 000000050 INF: ===================Camera #0 Frame #55===================
17-02-28 20:28:16.847 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:28:16.847 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:28:16.847 -08 000000070 INF: ===================Camera #2 Frame #55===================
17-02-28 20:28:16.880 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.009 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:28:17.009 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:28:17.009 -08 000000050 INF: ===================Camera #0 Frame #61===================
17-02-28 20:28:17.018 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:28:17.018 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:28:17.019 -08 000000030 INF: Y Motor: Unshifted Position: 4880996
17-02-28 20:28:17.019 -08 000000070 INF: ===================Camera #2 Frame #61===================
17-02-28 20:28:17.069 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.179 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:28:17.179 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:28:17.179 -08 000000050 INF: ===================Camera #0 Frame #67===================
17-02-28 20:28:17.190 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:28:17.190 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:28:17.190 -08 000000070 INF: ===================Camera #2 Frame #68===================
17-02-28 20:28:17.193 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.329 -08 000000030 INF: Y Motor: Unshifted Position: 4679279
17-02-28 20:28:17.349 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:28:17.349 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:28:17.349 -08 000000050 INF: ===================Camera #0 Frame #73===================
17-02-28 20:28:17.364 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:28:17.364 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:28:17.364 -08 000000070 INF: ===================Camera #2 Frame #74===================
17-02-28 20:28:17.379 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.504 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.519 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:28:17.519 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:28:17.519 -08 000000050 INF: ===================Camera #0 Frame #80===================
17-02-28 20:28:17.535 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:28:17.535 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:28:17.538 -08 000000070 INF: ===================Camera #2 Frame #80===================
17-02-28 20:28:17.641 -08 000000030 INF: Y Motor: Unshifted Position: 4473215
17-02-28 20:28:17.691 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.692 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:28:17.692 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:28:17.692 -08 000000050 INF: ===================Camera #0 Frame #86===================
17-02-28 20:28:17.709 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 86, frameCount = 87.
17-02-28 20:28:17.709 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 87
17-02-28 20:28:17.709 -08 000000070 INF: ===================Camera #2 Frame #87===================
17-02-28 20:28:17.816 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:17.862 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:28:17.862 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:28:17.862 -08 000000050 INF: ===================Camera #0 Frame #92===================
17-02-28 20:28:17.883 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:28:17.883 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:28:17.883 -08 000000070 INF: ===================Camera #2 Frame #93===================
17-02-28 20:28:17.955 -08 000000030 INF: Y Motor: Unshifted Position: 4272154
17-02-28 20:28:18.005 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:18.032 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:28:18.032 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:28:18.032 -08 000000050 INF: ===================Camera #0 Frame #99===================
17-02-28 20:28:18.054 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:28:18.054 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:28:18.054 -08 000000070 INF: ===================Camera #2 Frame #99===================
17-02-28 20:28:18.129 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:18.205 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:28:18.205 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:28:18.205 -08 000000050 INF: ===================Camera #0 Frame #105===================
17-02-28 20:28:18.225 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:28:18.225 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:28:18.225 -08 000000070 INF: ===================Camera #2 Frame #106===================
17-02-28 20:28:18.266 -08 000000030 INF: Y Motor: Unshifted Position: 4070434
17-02-28 20:28:18.316 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:18.375 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:28:18.375 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:28:18.375 -08 000000050 INF: ===================Camera #0 Frame #111===================
17-02-28 20:28:18.399 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:28:18.399 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:28:18.399 -08 000000070 INF: ===================Camera #2 Frame #112===================
17-02-28 20:28:18.441 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:18.545 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:28:18.545 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:28:18.545 -08 000000050 INF: ===================Camera #0 Frame #117===================
17-02-28 20:28:18.570 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:28:18.570 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:28:18.570 -08 000000070 INF: ===================Camera #2 Frame #118===================
17-02-28 20:28:18.579 -08 000000030 INF: Y Motor: Unshifted Position: 3866336
17-02-28 20:28:18.629 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:18.715 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:28:18.715 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:28:18.715 -08 000000050 INF: ===================Camera #0 Frame #124===================
17-02-28 20:28:18.741 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:28:18.741 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:28:18.741 -08 000000070 INF: ===================Camera #2 Frame #125===================
17-02-28 20:28:18.753 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:18.888 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:28:18.888 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:28:18.888 -08 000000050 INF: ===================Camera #0 Frame #130===================
17-02-28 20:28:18.889 -08 000000030 INF: Y Motor: Unshifted Position: 3664831
17-02-28 20:28:18.915 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:28:18.915 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:28:18.915 -08 000000070 INF: ===================Camera #2 Frame #131===================
17-02-28 20:28:18.939 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.058 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:28:19.058 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:28:19.058 -08 000000050 INF: ===================Camera #0 Frame #136===================
17-02-28 20:28:19.064 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.086 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:28:19.086 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:28:19.086 -08 000000070 INF: ===================Camera #2 Frame #137===================
17-02-28 20:28:19.203 -08 000000030 INF: Y Motor: Unshifted Position: 3460519
17-02-28 20:28:19.228 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:28:19.228 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:28:19.228 -08 000000050 INF: ===================Camera #0 Frame #143===================
17-02-28 20:28:19.253 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.257 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:28:19.257 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:28:19.257 -08 000000070 INF: ===================Camera #2 Frame #144===================
17-02-28 20:28:19.377 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.402 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:28:19.402 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:28:19.402 -08 000000050 INF: ===================Camera #0 Frame #149===================
17-02-28 20:28:19.431 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:28:19.431 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:28:19.431 -08 000000070 INF: ===================Camera #2 Frame #150===================
17-02-28 20:28:19.513 -08 000000030 INF: Y Motor: Unshifted Position: 3259023
17-02-28 20:28:19.563 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.572 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:28:19.572 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:28:19.572 -08 000000050 INF: ===================Camera #0 Frame #155===================
17-02-28 20:28:19.602 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:28:19.602 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:28:19.602 -08 000000070 INF: ===================Camera #2 Frame #156===================
17-02-28 20:28:19.689 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.742 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:28:19.742 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:28:19.742 -08 000000050 INF: ===================Camera #0 Frame #162===================
17-02-28 20:28:19.773 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:28:19.773 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:28:19.773 -08 000000070 INF: ===================Camera #2 Frame #163===================
17-02-28 20:28:19.825 -08 000000030 INF: Y Motor: Unshifted Position: 3056007
17-02-28 20:28:19.875 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:19.915 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:28:19.915 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:28:19.915 -08 000000050 INF: ===================Camera #0 Frame #168===================
17-02-28 20:28:19.947 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:28:19.947 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:28:19.947 -08 000000070 INF: ===================Camera #2 Frame #169===================
17-02-28 20:28:20.000 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.085 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:28:20.085 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:28:20.085 -08 000000050 INF: ===================Camera #0 Frame #174===================
17-02-28 20:28:20.118 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:28:20.118 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:28:20.118 -08 000000070 INF: ===================Camera #2 Frame #175===================
17-02-28 20:28:20.139 -08 000000030 INF: Y Motor: Unshifted Position: 2851909
17-02-28 20:28:20.189 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.255 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:28:20.255 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:28:20.255 -08 000000050 INF: ===================Camera #0 Frame #180===================
17-02-28 20:28:20.289 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:28:20.289 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:28:20.289 -08 000000070 INF: ===================Camera #2 Frame #182===================
17-02-28 20:28:20.313 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.425 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:28:20.425 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:28:20.425 -08 000000050 INF: ===================Camera #0 Frame #187===================
17-02-28 20:28:20.449 -08 000000030 INF: Y Motor: Unshifted Position: 2650200
17-02-28 20:28:20.463 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:28:20.463 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:28:20.463 -08 000000070 INF: ===================Camera #2 Frame #188===================
17-02-28 20:28:20.499 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.598 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:28:20.598 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:28:20.598 -08 000000050 INF: ===================Camera #0 Frame #193===================
17-02-28 20:28:20.627 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.634 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:28:20.634 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:28:20.634 -08 000000070 INF: ===================Camera #2 Frame #194===================
17-02-28 20:28:20.761 -08 000000030 INF: Y Motor: Unshifted Position: 2447400
17-02-28 20:28:20.768 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:28:20.768 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:28:20.768 -08 000000050 INF: ===================Camera #0 Frame #199===================
17-02-28 20:28:20.805 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:28:20.805 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:28:20.805 -08 000000070 INF: ===================Camera #2 Frame #201===================
17-02-28 20:28:20.811 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.936 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:20.938 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:28:20.938 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:28:20.938 -08 000000050 INF: ===================Camera #0 Frame #206===================
17-02-28 20:28:20.978 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:28:20.978 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:28:20.978 -08 000000070 INF: ===================Camera #2 Frame #207===================
17-02-28 20:28:21.075 -08 000000030 INF: Y Motor: Unshifted Position: 2243086
17-02-28 20:28:21.111 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:28:21.111 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:28:21.111 -08 000000050 INF: ===================Camera #0 Frame #212===================
17-02-28 20:28:21.125 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:21.149 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:28:21.149 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:28:21.149 -08 000000070 INF: ===================Camera #2 Frame #213===================
17-02-28 20:28:21.251 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:21.281 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:28:21.281 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:28:21.281 -08 000000050 INF: ===================Camera #0 Frame #218===================
17-02-28 20:28:21.320 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:28:21.320 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:28:21.320 -08 000000070 INF: ===================Camera #2 Frame #220===================
17-02-28 20:28:21.385 -08 000000030 INF: Y Motor: Unshifted Position: 2041366
17-02-28 20:28:21.435 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:21.451 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:28:21.451 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:28:21.451 -08 000000050 INF: ===================Camera #0 Frame #224===================
17-02-28 20:28:21.494 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:28:21.494 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:28:21.494 -08 000000070 INF: ===================Camera #2 Frame #226===================
17-02-28 20:28:21.562 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:21.621 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:28:21.621 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:28:21.621 -08 000000050 INF: ===================Camera #0 Frame #231===================
17-02-28 20:28:21.664 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:28:21.664 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:28:21.664 -08 000000070 INF: ===================Camera #2 Frame #232===================
17-02-28 20:28:21.697 -08 000000030 INF: Y Motor: Unshifted Position: 1837266
17-02-28 20:28:21.747 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:21.794 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:28:21.794 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:28:21.794 -08 000000050 INF: ===================Camera #0 Frame #237===================
17-02-28 20:28:21.835 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:28:21.835 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:28:21.835 -08 000000070 INF: ===================Camera #2 Frame #239===================
17-02-28 20:28:21.872 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:21.964 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:28:21.964 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:28:21.964 -08 000000050 INF: ===================Camera #0 Frame #243===================
17-02-28 20:28:22.009 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:28:22.009 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:28:22.009 -08 000000070 INF: ===================Camera #2 Frame #245===================
17-02-28 20:28:22.011 -08 000000030 INF: Y Motor: Unshifted Position: 1634244
17-02-28 20:28:22.061 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:22.134 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:28:22.134 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:28:22.134 -08 000000050 INF: ===================Camera #0 Frame #250===================
17-02-28 20:28:22.180 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:28:22.180 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:28:22.180 -08 000000070 INF: ===================Camera #2 Frame #251===================
17-02-28 20:28:22.185 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:22.308 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:28:22.308 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:28:22.308 -08 000000050 INF: ===================Camera #0 Frame #256===================
17-02-28 20:28:22.322 -08 000000030 INF: Y Motor: Unshifted Position: 1432739
17-02-28 20:28:22.351 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:28:22.351 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:28:22.351 -08 000000070 INF: ===================Camera #2 Frame #258===================
17-02-28 20:28:22.372 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:22.478 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:28:22.478 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:28:22.478 -08 000000050 INF: ===================Camera #0 Frame #262===================
17-02-28 20:28:22.496 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:22.525 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:28:22.525 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:28:22.525 -08 000000070 INF: ===================Camera #2 Frame #264===================
17-02-28 20:28:22.635 -08 000000030 INF: Y Motor: Unshifted Position: 1228622
17-02-28 20:28:22.648 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:28:22.648 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:28:22.648 -08 000000050 INF: ===================Camera #0 Frame #269===================
17-02-28 20:28:22.685 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:22.696 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:28:22.696 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:28:22.696 -08 000000070 INF: ===================Camera #2 Frame #270===================
17-02-28 20:28:22.756 -08 000000073 INF: FPGA: Recv TDIYWAIT
17-02-28 20:28:22.756 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:22.758 -08 000000077 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:28:22.758 -08 000000086 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:28:22.759 -08 000000074 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:28:22.759 -08 000000086 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:28:22.759 -08 000000086 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:28:22.759 -08 000000086 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:28:22.759 -08 000000074 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:28:22.759 -08 000000086 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:28:22.759 -08 000000074 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:28:22.759 -08 000000074 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:28:22.760 -08 000000074 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:28:22.808 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:22.821 -08 000000050 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:22.821 -08 000000050 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:22.821 -08 000000050 INF: ===================Camera #0 Frame #272===================
17-02-28 20:28:22.831 -08 000000050 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:22.832 -08 000000050 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:22.947 -08 000000030 INF: Y Motor: Unshifted Position: 1025617
17-02-28 20:28:22.997 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:23.000 -08 000000050 INF: Camera #0 ReleaseBuffer
17-02-28 20:28:23.000 -08 000000070 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:23.000 -08 000000070 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:23.000 -08 000000070 INF: ===================Camera #2 Frame #272===================
17-02-28 20:28:23.000 -08 000000050 INF: ===================Camera TDI===================
17-02-28 20:28:23.007 -08 000000070 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:23.008 -08 000000070 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:23.031 -08 000000050 INF: ======================================
17-02-28 20:28:23.131 -08 000000069 INF: FPGA: Recv EX1MV
17-02-28 20:28:23.131 -08 000000069 INF: FPGA: Recv EX2MV
17-02-28 20:28:23.131 -08 000000074 INF: Excitation Filter 2: Moved 107 steps in 372.0412 ms
17-02-28 20:28:23.131 -08 000000086 INF: Excitation Filter 1: Moved 107 steps in 372.2275 ms
17-02-28 20:28:23.131 -08 000000074 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1766 ms
17-02-28 20:28:23.131 -08 000000086 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.3267 ms
17-02-28 20:28:23.131 -08 000000086 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.4085 ms
17-02-28 20:28:23.131 -08 000000074 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.2834 ms
17-02-28 20:28:23.131 -08 000000086 INF: ======================================
17-02-28 20:28:23.131 -08 000000074 INF: ======================================
17-02-28 20:28:23.133 -08 000000030 INF: Y Motor: Unshifted Position: 993096
17-02-28 20:28:23.133 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:23.133 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:23.133 -08 000000077 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:23.134 -08 000000077 INF: ======================================
17-02-28 20:28:23.196 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:28:23.196 -08 000000030 INF: Y Motor: Moved to 14.9310 after 7862 ms
17-02-28 20:28:23.196 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:23.206 -08 000000070 INF: Camera #2 ReleaseBuffer
17-02-28 20:28:23.206 -08 000000070 INF: ===================Camera TDI===================
17-02-28 20:28:23.241 -08 000000070 INF: ======================================
17-02-28 20:28:23.242 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:28:23.243 -08 000000047 INF: ======================================
17-02-28 20:28:23.257 -08 000000030 INF: Y Motor: Recv v 4097\r
17-02-28 20:28:23.257 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:23.257 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:23.323 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:28:23.323 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:23.323 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:23.382 -08 000000030 INF: Y Motor: Recv v 134217728\r
17-02-28 20:28:23.382 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:28:23.382 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:23.382 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:23.444 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:28:23.444 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:23.444 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:23.444 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:23.509 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:28:23.509 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:23.509 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:23.571 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:28:23.571 -08 000000030 INF: ======================================
17-02-28 20:28:23.572 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:23.573 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:23.574 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:23.574 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:28:23.631 -08 000000038 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:28:23.631 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:23.694 -08 000000029 INF: FPGA: Recv TDIYERD 1493099
17-02-28 20:28:23.694 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:28:23.757 -08 000000032 INF: FPGA: Recv ZADCR 21085
17-02-28 20:28:23.757 -08 000000042 INF: At scan end Y pos = 14.931 and Z pos = -0.081. Y moved -48.539 mm
17-02-28 20:28:23.757 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:28:23.818 -08 000000087 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:28:23.818 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:28:23.818 -08 000000042 INF: TDIScan finished after 11775.2584 ms
17-02-28 20:28:23.818 -08 000000042 INF: Image[0]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:28:23.818 -08 000000042 INF: Image[2]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:28:23.820 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:23.854 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.437 um
17-02-28 20:28:23.854 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:23.855 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:28:23.880 -08 000000028 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:28:23.880 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:23.881 -08 000000030 INF: ===================Dither Clean Up Command===================
17-02-28 20:28:23.881 -08 000000076 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:28:23.881 -08 000000080 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:28:23.881 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:28:23.882 -08 000000047 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:28:23.882 -08 000000076 INF: ======================================
17-02-28 20:28:23.882 -08 000000047 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:28:23.882 -08 000000080 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:23.882 -08 000000080 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:23.882 -08 000000036 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:23.882 -08 000000084 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:23.883 -08 000000036 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:28:23.885 -08 000000084 INF: ===================LFT:Extracting coords===================
17-02-28 20:28:23.911 -08 000000084 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:23.911 -08 000000084 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:28:23.912 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:28:23.912 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:28:23.912 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:28:23.912 -08 000000091 INF: ===================LookupFocusTracking===================
17-02-28 20:28:23.912 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:23.913 -08 000000082 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:23.913 -08 000000091 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:23.913 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:23.942 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:23.942 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:28:23.942 -08 000000036 INF: FPGA: Xmit ZDACW 26335\n
17-02-28 20:28:23.942 -08 000000047 INF: ======================================
17-02-28 20:28:23.944 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:28:23.944 -08 000000080 INF: ======================================
17-02-28 20:28:23.987 -08 000000087 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:23.987 -08 000000082 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:23.987 -08 000000091 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:23.987 -08 000000078 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:24.004 -08 000000062 INF: FPGA: Recv ZDACW 
17-02-28 20:28:24.005 -08 000000036 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:28:24.005 -08 000000036 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:28:24.066 -08 000000051 INF: FPGA: Recv TDIBB
17-02-28 20:28:24.066 -08 000000036 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:24.067 -08 000000036 INF: ======================================
17-02-28 20:28:24.138 -08 000000087 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:28:24.138 -08 000000087 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0804633831022333 in the next cycle, cycle 4 FC:B, C:3,L:4,B
17-02-28 20:28:24.138 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:28:24.138 -08 000000082 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:28:24.138 -08 000000082 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0804633831022333 in the next cycle, cycle 4 FC:B, C:3,L:4,B
17-02-28 20:28:24.138 -08 000000087 INF: ======================================
17-02-28 20:28:24.138 -08 000000091 INF: LFT found best fwhm score 2.000286 in 151 ms
17-02-28 20:28:24.138 -08 000000091 INF: LFT found good score at index 5537 with fwhm value 2.000286. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:4,B
17-02-28 20:28:24.138 -08 000000078 INF: LFT found best fwhm score 2.000025 in 151 ms
17-02-28 20:28:24.138 -08 000000078 INF: LFT found good score at index 581 with fwhm value 2.000025. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:4,B
17-02-28 20:28:24.139 -08 000000082 INF: ===================LookupFocusTracking===================
17-02-28 20:28:24.139 -08 000000091 INF: ===================LookupFocusTracking===================
17-02-28 20:28:24.139 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:28:24.139 -08 000000082 INF: ======================================
17-02-28 20:28:24.139 -08 000000078 INF: ======================================
17-02-28 20:28:24.139 -08 000000091 INF: ======================================
17-02-28 20:28:24.140 -08 000000084 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:24.140 -08 000000084 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:4,B
17-02-28 20:28:24.141 -08 000000084 INF: ======================================
17-02-28 20:28:24.142 -08 000000030 INF: ======================================
17-02-28 20:28:24.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.144 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:28:24.145 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.145 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:28:24.145 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:28:24.146 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:28:24.146 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:28:24.146 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:28:24.146 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 1 - X = 76.92318 Y = 39.78827===================
17-02-28 20:28:24.169 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:28:24.169 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:24.170 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:28:24.170 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:24.170 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:28:24.170 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:28:24.170 -08 000000042 INF: Transformed XStagePosition from 78.03118 mm to 78.0084113348275 mm.
17-02-28 20:28:24.215 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.578967801529 mm.
17-02-28 20:28:24.215 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.378967801529 mm.
17-02-28 20:28:24.215 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.469717801529 mm.
17-02-28 20:28:24.216 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":4,"Tile":2103,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF219","HCSMMF278","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.217 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:28:24.218 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:24.218 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -100.5 um, section = D_1
17-02-28 20:28:24.219 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:24.220 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:24.236 -08 000000078 INF: ===================Move X,Y===================
17-02-28 20:28:24.236 -08 000000090 INF: ===================MoveEmissionFilters===================
17-02-28 20:28:24.236 -08 000000078 INF: ===================Move X,Y, Parallel===================
17-02-28 20:28:24.238 -08 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:24.238 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:24.238 -08 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:24.239 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:28:24.239 -08 000000050 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:28:24.239 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:24.241 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:28:24.273 -08 000000044 INF: ===================Move X Motor without settling===================
17-02-28 20:28:24.273 -08 000000030 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:28:24.273 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:24.273 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:28:24.273 -08 000000044 INF: X Motor: Xmit PR VM\n
17-02-28 20:28:24.274 -08 000000030 INF: ======================================
17-02-28 20:28:24.274 -08 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:24.274 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:24.274 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:24.274 -08 000000088 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:24.275 -08 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:24.275 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:24.275 -08 000000088 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:24.276 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:24.276 -08 000000095 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:28:24.276 -08 000000070 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:28:24.276 -08 000000039 INF: Y Motor: Moving to 64.5790 mm @25.000 mm/sec, started at 14.9310 mm
17-02-28 20:28:24.276 -08 000000095 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:28:24.276 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:24.276 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:24.276 -08 000000070 INF: ======================================
17-02-28 20:28:24.276 -08 000000095 INF: ======================================
17-02-28 20:28:24.277 -08 000000098 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:28:24.277 -08 000000098 INF: ======================================
17-02-28 20:28:24.278 -08 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:24.278 -08 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:24.278 -08 000000070 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:28:24.278 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:28:24.279 -08 000000070 INF: ======================================
17-02-28 20:28:24.279 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:24.279 -08 000000079 INF: ======================================
17-02-28 20:28:24.280 -08 000000061 INF: ======================================
17-02-28 20:28:24.280 -08 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:24.281 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:24.281 -08 000000082 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:28:24.288 -08 000000095 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:28:24.289 -08 000000095 INF: ======================================
17-02-28 20:28:24.291 -08 000000088 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:24.292 -08 000000088 INF: ======================================
17-02-28 20:28:24.306 -08 000000030 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:28:24.306 -08 000000030 INF: ======================================
17-02-28 20:28:24.308 -08 000000030 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:28:24.309 -08 000000030 INF: ======================================
17-02-28 20:28:24.310 -08 000000100 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:24.312 -08 000000100 INF: ======================================
17-02-28 20:28:24.313 -08 000000090 INF: ======================================
17-02-28 20:28:24.319 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":4,"Tile":2104,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF191","HCSMMF284","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.321 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":4,"Tile":2105,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF271","HCSMMF241","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.324 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":4,"Tile":2110,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF238","HCSMMF189","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.334 -08 000000091 INF: FPGA: Recv ZSEL 
17-02-28 20:28:24.335 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":4,"Tile":2101,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF231","HCSMMF262","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.335 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:24.336 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:28:24.336 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:24.336 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:24.336 -08 000000082 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:28:24.352 -08 000000044 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:28:24.352 -08 000000044 INF: X Motor: Xmit PR VI\n
17-02-28 20:28:24.360 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":4,"Tile":2108,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF200","HCSMMF249","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.362 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":4,"Tile":2106,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF198","HCSMMF182","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.374 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":4,"Tile":2107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF245","HCSMMF193","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.379 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":4,"Tile":2112,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF208","HCSMMF232","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.389 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":4,"Tile":2102,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF276","HCSMMF246","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.391 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":4,"Tile":2119,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF235","HCSMMF201","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.393 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":4,"Tile":2117,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF178","HCSMMF230","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.395 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":4,"Tile":2124,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF274","HCSMMF218","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.397 -08 000000062 INF: FPGA: Recv TDIBB
17-02-28 20:28:24.397 -08 000000082 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:24.398 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:28:24.398 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:24.399 -08 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:24.399 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:24.400 -08 000000044 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:28:24.400 -08 000000044 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:28:24.400 -08 000000044 INF: X Motor: Moving to 78.0084 mm @15.000 mm/sec, started at 76.9077 mm
17-02-28 20:28:24.400 -08 000000044 INF: X Motor: Xmit MA 7786\n
17-02-28 20:28:24.401 -08 000000082 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:28:24.401 -08 000000082 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:28:24.401 -08 000000082 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:28:24.402 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":4,"Tile":2109,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF251","HCSMMF228","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.403 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":4,"Tile":2115,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF181","HCSMMF256","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.404 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":4,"Tile":2116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF242","HCSMMF285","HCSMMF283","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.405 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":4,"Tile":2121,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF226","HCSMMF277","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.406 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":4,"Tile":2114,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF176","HCSMMF286","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.407 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":4,"Tile":2113,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF202","HCSMMF206","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.408 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":4,"Tile":2120,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF259","HCSMMF250","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.409 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":4,"Tile":2118,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF192","HCSMMF257","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.410 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":4,"Tile":2127,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF183","HCSMMF272","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.411 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":4,"Tile":2123,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF281","HCSMMF210","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.412 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":4,"Tile":2125,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF229","HCSMMF196","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.413 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":4,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF268","HCSMMF239","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.414 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":4,"Tile":2122,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF248","HCSMMF186","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.415 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":4,"Tile":2111,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF247","HCSMMF275","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.416 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":4,"Tile":2126,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF216","HCSMMF177","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:24.420 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:24.426 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:28:24.458 -08 000000091 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:24.458 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:24.460 -08 000000044 INF: X Motor: Recv MA 7786\r\n>
17-02-28 20:28:24.460 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:28:24.460 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:24.460 -08 000000044 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:28:24.460 -08 000000082 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:28:24.460 -08 000000039 INF: Y Motor: Set target position to 5957897 encoder counts
17-02-28 20:28:24.460 -08 000000039 INF: Y Motor: Xmit s r0xca 5957897\r
17-02-28 20:28:24.460 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:24.462 -08 000000082 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:28:24.462 -08 000000082 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:28:24.462 -08 000000082 INF: Z Motor: Arming to move to -0.0605 mm
17-02-28 20:28:24.462 -08 000000082 INF: FPGA: Xmit ZYT 6437897 4\n
17-02-28 20:28:24.520 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:28:24.520 -08 000000082 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1493096 enc / 14.931 mm / ) = 6437897 enc / 64.379 mm
17-02-28 20:28:24.520 -08 000000082 INF: FPGA: Xmit ZARM 15850\n
17-02-28 20:28:24.520 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:24.520 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:28:24.522 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:28:24.522 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:28:24.522 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:24.562 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:24.567 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:28:24.583 -08 000000030 INF: FPGA: Recv ZARM
17-02-28 20:28:24.583 -08 000000082 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.746 ms
17-02-28 20:28:24.583 -08 000000082 INF: Z Motor: ArmAbsStepped took 120.6841 ms
17-02-28 20:28:24.583 -08 000000082 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:24.584 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:28:24.584 -08 000000039 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:28:24.584 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:24.584 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:28:24.586 -08 000000082 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:28:24.586 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:28:24.588 -08 000000082 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:28:24.588 -08 000000082 INF: ===================TDI Scan Setup===================
17-02-28 20:28:24.589 -08 000000082 INF: ======================================
17-02-28 20:28:24.653 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:24.659 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:28:24.708 -08 000000039 INF: Y Motor: Unshifted Position: 1074514
17-02-28 20:28:24.758 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:24.885 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:24.899 -08 000000089 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:24.900 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:24.900 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:24.901 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:24.906 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:28:24.915 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:24.917 -08 000000089 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:24.996 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:25.021 -08 000000039 INF: Y Motor: Unshifted Position: 1782262
17-02-28 20:28:25.071 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:25.083 -08 000000044 INF: X Motor: Xmit PR ER\n
17-02-28 20:28:25.146 -08 000000044 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:28:25.146 -08 000000044 INF: X Motor: Moved to 78.0088 after 685 ms
17-02-28 20:28:25.146 -08 000000044 INF: ======================================
17-02-28 20:28:25.195 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:25.308 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:28:25.334 -08 000000039 INF: Y Motor: Unshifted Position: 2558125
17-02-28 20:28:25.384 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:25.508 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:25.516 -08 000000089 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:25.517 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:25.517 -08 000000089 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:25.532 -08 000000089 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:25.534 -08 000000089 INF: ===================Camera Arm TDI===================
17-02-28 20:28:25.535 -08 000000089 INF: ======================================
17-02-28 20:28:25.536 -08 000000050 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:25.538 -08 000000050 INF: ======================================
17-02-28 20:28:25.644 -08 000000039 INF: Y Motor: Unshifted Position: 3340558
17-02-28 20:28:25.694 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:25.819 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:25.958 -08 000000039 INF: Y Motor: Unshifted Position: 4118967
17-02-28 20:28:26.008 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:26.132 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:26.268 -08 000000039 INF: Y Motor: Unshifted Position: 4901403
17-02-28 20:28:26.319 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:26.446 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:26.582 -08 000000039 INF: Y Motor: Unshifted Position: 5683308
17-02-28 20:28:26.632 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:26.757 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:26.878 -08 000000070 INF: RunCopyService queue size at 2/28/2017 8:28:26 PM is 2
17-02-28 20:28:26.895 -08 000000039 INF: Y Motor: Unshifted Position: 5957899
17-02-28 20:28:26.895 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:26.895 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:26.957 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:28:26.957 -08 000000039 INF: Y Motor: Moved to 64.5790 after 2372 ms
17-02-28 20:28:26.957 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:27.020 -08 000000039 INF: Y Motor: Recv v 4096\r
17-02-28 20:28:27.020 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:27.020 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:27.081 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:28:27.081 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:27.081 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:27.143 -08 000000039 INF: Y Motor: Recv v 402653184\r
17-02-28 20:28:27.143 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:28:27.143 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:27.143 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:27.207 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:28:27.207 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:27.207 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:27.207 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:27.267 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:28:27.267 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:27.267 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:27.332 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:28:27.332 -08 000000039 INF: ======================================
17-02-28 20:28:27.333 -08 000000078 INF: ===================Move X,Y===================
17-02-28 20:28:27.334 -08 000000078 INF: ======================================
17-02-28 20:28:27.335 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:27.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:27.336 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:28:27.336 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:28:27.394 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:27.394 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:28:27.454 -08 000000070 INF: FPGA: Recv ZFREQCL
17-02-28 20:28:27.454 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:28:27.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:27.455 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:27.517 -08 000000079 INF: FPGA: Recv TDIYERD 6457899
17-02-28 20:28:27.517 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457899 counts (64.579 mm)
17-02-28 20:28:27.517 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:27.518 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:27.519 -08 000000069 INF: ===================TDI FPGA Arm===================
17-02-28 20:28:27.519 -08 000000047 INF: ===================Set YMotor gains for scans===================
17-02-28 20:28:27.519 -08 000000047 INF: ======================================
17-02-28 20:28:27.519 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:27.520 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:28:27.520 -08 000000069 INF: FPGA: Xmit TDIYPOS 6346972\n
17-02-28 20:28:27.578 -08 000000073 INF: FPGA: Recv TDIYPOS
17-02-28 20:28:27.579 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:27.580 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:28:27.580 -08 000000069 INF: FPGA: Xmit TDIYARM3 139264 6437897 1 1\n
17-02-28 20:28:27.647 -08 000000033 INF: FPGA: Recv TDIYARM3
17-02-28 20:28:27.648 -08 000000069 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:27.650 -08 000000069 INF: ===================TDI FPGA Arm===================
17-02-28 20:28:27.650 -08 000000069 INF: ======================================
17-02-28 20:28:27.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:27.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:27.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:27.653 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:27.654 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:27.654 -08 000000090 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:28:27.654 -08 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:28:27.655 -08 000000090 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:28:27.655 -08 000000037 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:28:27.655 -08 000000090 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:28:27.655 -08 000000090 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:28:27.655 -08 000000090 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:28:27.655 -08 000000037 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:28:27.655 -08 000000037 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:28:27.656 -08 000000037 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:28:28.016 -08 000000051 INF: FPGA: Recv EX2MV
17-02-28 20:28:28.016 -08 000000051 INF: FPGA: Recv EX1MV
17-02-28 20:28:28.016 -08 000000037 INF: Excitation Filter 1: Moved -107 steps in 360.7506 ms
17-02-28 20:28:28.016 -08 000000090 INF: Excitation Filter 2: Moved -107 steps in 361.1205 ms
17-02-28 20:28:28.016 -08 000000037 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 361.227 ms
17-02-28 20:28:28.016 -08 000000037 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 361.343 ms
17-02-28 20:28:28.016 -08 000000090 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 361.3152 ms
17-02-28 20:28:28.016 -08 000000090 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 361.5954 ms
17-02-28 20:28:28.016 -08 000000037 INF: ======================================
17-02-28 20:28:28.017 -08 000000090 INF: ======================================
17-02-28 20:28:28.018 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:28.019 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:28.020 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:28.020 -08 000000100 INF: ===================FPGA Z Wait===================
17-02-28 20:28:28.020 -08 000000105 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:28.020 -08 000000100 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:28:28.020 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:28:28.020 -08 000000105 INF: Y Motor: Moving to 14.9306 mm @6.500 mm/sec, started at 64.5790 mm
17-02-28 20:28:28.020 -08 000000105 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:28.020 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:28.020 -08 000000106 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:28:28.021 -08 000000106 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:28:28.021 -08 000000098 INF: ===================Camera TDI, Parallel===================
17-02-28 20:28:28.022 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:28:28.022 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:28:28.024 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:28.024 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:28.024 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:28.024 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:28.082 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:28.082 -08 000000105 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:28.082 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:28.141 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:28.141 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:28.174 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:28.174 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:28.174 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:28.174 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:28.203 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:28.203 -08 000000105 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:28.203 -08 000000105 INF: Y Motor: Set target position to 993063 encoder counts
17-02-28 20:28:28.203 -08 000000105 INF: Y Motor: Xmit s r0xca 993063\r
17-02-28 20:28:28.265 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:28.265 -08 000000105 INF: Y Motor: Start the move command
17-02-28 20:28:28.265 -08 000000105 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:28.324 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:28.324 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:28.324 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:28.324 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:28.330 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:28.330 -08 000000105 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:28:28.330 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:28.390 -08 000000086 INF: FPGA: Recv ZWAIT 
17-02-28 20:28:28.390 -08 000000100 INF: ======================================
17-02-28 20:28:28.454 -08 000000105 INF: Y Motor: Unshifted Position: 5894315
17-02-28 20:28:28.474 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:28.474 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:28.474 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:28.474 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:28.474 -08 000000077 INF: ===================Camera #0 Frame #5===================
17-02-28 20:28:28.474 -08 000000083 INF: ===================Camera #2 Frame #5===================
17-02-28 20:28:28.504 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:28.628 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:28.646 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:28:28.646 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:28:28.646 -08 000000077 INF: ===================Camera #0 Frame #11===================
17-02-28 20:28:28.648 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:28:28.648 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:28:28.648 -08 000000083 INF: ===================Camera #2 Frame #11===================
17-02-28 20:28:28.767 -08 000000105 INF: Y Motor: Unshifted Position: 5692594
17-02-28 20:28:28.816 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:28:28.816 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:28:28.816 -08 000000077 INF: ===================Camera #0 Frame #17===================
17-02-28 20:28:28.817 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:28.817 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:28:28.817 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:28:28.817 -08 000000083 INF: ===================Camera #2 Frame #17===================
17-02-28 20:28:28.941 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:28.989 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:28:28.989 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:28:28.989 -08 000000083 INF: ===================Camera #2 Frame #24===================
17-02-28 20:28:28.992 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:28:28.992 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:28:28.992 -08 000000077 INF: ===================Camera #0 Frame #24===================
17-02-28 20:28:29.077 -08 000000105 INF: Y Motor: Unshifted Position: 5489154
17-02-28 20:28:29.127 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:29.169 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:28:29.169 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:28:29.169 -08 000000083 INF: ===================Camera #2 Frame #30===================
17-02-28 20:28:29.172 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:28:29.172 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:28:29.172 -08 000000077 INF: ===================Camera #0 Frame #30===================
17-02-28 20:28:29.251 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:29.338 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:28:29.338 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:28:29.338 -08 000000083 INF: ===================Camera #2 Frame #36===================
17-02-28 20:28:29.340 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:28:29.340 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:28:29.340 -08 000000077 INF: ===================Camera #0 Frame #37===================
17-02-28 20:28:29.390 -08 000000105 INF: Y Motor: Unshifted Position: 5285478
17-02-28 20:28:29.440 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:29.509 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:28:29.509 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:28:29.509 -08 000000083 INF: ===================Camera #2 Frame #43===================
17-02-28 20:28:29.522 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:28:29.522 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:28:29.522 -08 000000077 INF: ===================Camera #0 Frame #43===================
17-02-28 20:28:29.564 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:29.688 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:28:29.688 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:28:29.688 -08 000000083 INF: ===================Camera #2 Frame #49===================
17-02-28 20:28:29.693 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:28:29.693 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:28:29.693 -08 000000077 INF: ===================Camera #0 Frame #50===================
17-02-28 20:28:29.703 -08 000000105 INF: Y Motor: Unshifted Position: 5083325
17-02-28 20:28:29.753 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:29.858 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:28:29.858 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:28:29.858 -08 000000083 INF: ===================Camera #2 Frame #56===================
17-02-28 20:28:29.869 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:28:29.869 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:28:29.869 -08 000000077 INF: ===================Camera #0 Frame #56===================
17-02-28 20:28:29.876 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.015 -08 000000105 INF: Y Motor: Unshifted Position: 4880962
17-02-28 20:28:30.031 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:28:30.031 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:28:30.031 -08 000000083 INF: ===================Camera #2 Frame #62===================
17-02-28 20:28:30.038 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:28:30.038 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:28:30.038 -08 000000077 INF: ===================Camera #0 Frame #62===================
17-02-28 20:28:30.065 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.189 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.211 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:28:30.211 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:28:30.211 -08 000000083 INF: ===================Camera #2 Frame #69===================
17-02-28 20:28:30.214 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:28:30.214 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:28:30.214 -08 000000077 INF: ===================Camera #0 Frame #69===================
17-02-28 20:28:30.325 -08 000000105 INF: Y Motor: Unshifted Position: 4677507
17-02-28 20:28:30.375 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.386 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:28:30.386 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:28:30.386 -08 000000077 INF: ===================Camera #0 Frame #75===================
17-02-28 20:28:30.394 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:28:30.394 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:28:30.394 -08 000000083 INF: ===================Camera #2 Frame #75===================
17-02-28 20:28:30.499 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.562 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:28:30.562 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:28:30.562 -08 000000077 INF: ===================Camera #0 Frame #82===================
17-02-28 20:28:30.572 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:28:30.572 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:28:30.572 -08 000000083 INF: ===================Camera #2 Frame #82===================
17-02-28 20:28:30.638 -08 000000105 INF: Y Motor: Unshifted Position: 4474048
17-02-28 20:28:30.688 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.743 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:28:30.743 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:28:30.743 -08 000000077 INF: ===================Camera #0 Frame #88===================
17-02-28 20:28:30.746 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:28:30.746 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:28:30.746 -08 000000083 INF: ===================Camera #2 Frame #88===================
17-02-28 20:28:30.812 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:30.912 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:28:30.912 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:28:30.912 -08 000000077 INF: ===================Camera #0 Frame #94===================
17-02-28 20:28:30.924 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:28:30.924 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:28:30.924 -08 000000083 INF: ===================Camera #2 Frame #95===================
17-02-28 20:28:30.951 -08 000000105 INF: Y Motor: Unshifted Position: 4272334
17-02-28 20:28:31.001 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.081 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:28:31.081 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:28:31.081 -08 000000077 INF: ===================Camera #0 Frame #101===================
17-02-28 20:28:31.096 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:28:31.096 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:28:31.096 -08 000000083 INF: ===================Camera #2 Frame #101===================
17-02-28 20:28:31.125 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.253 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:28:31.253 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:28:31.253 -08 000000077 INF: ===================Camera #0 Frame #107===================
17-02-28 20:28:31.262 -08 000000105 INF: Y Motor: Unshifted Position: 4068663
17-02-28 20:28:31.265 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:28:31.265 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:28:31.265 -08 000000083 INF: ===================Camera #2 Frame #107===================
17-02-28 20:28:31.312 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.422 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:28:31.422 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:28:31.422 -08 000000077 INF: ===================Camera #0 Frame #113===================
17-02-28 20:28:31.434 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:28:31.434 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:28:31.434 -08 000000083 INF: ===================Camera #2 Frame #114===================
17-02-28 20:28:31.435 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.574 -08 000000105 INF: Y Motor: Unshifted Position: 3865215
17-02-28 20:28:31.590 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:28:31.590 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:28:31.590 -08 000000077 INF: ===================Camera #0 Frame #119===================
17-02-28 20:28:31.606 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:28:31.606 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:28:31.606 -08 000000083 INF: ===================Camera #2 Frame #120===================
17-02-28 20:28:31.624 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.748 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.759 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:28:31.759 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:28:31.759 -08 000000077 INF: ===================Camera #0 Frame #126===================
17-02-28 20:28:31.776 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:28:31.776 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:28:31.776 -08 000000083 INF: ===================Camera #2 Frame #126===================
17-02-28 20:28:31.887 -08 000000105 INF: Y Motor: Unshifted Position: 3663497
17-02-28 20:28:31.930 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:28:31.930 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:28:31.930 -08 000000077 INF: ===================Camera #0 Frame #132===================
17-02-28 20:28:31.937 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:31.945 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:28:31.945 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:28:31.945 -08 000000083 INF: ===================Camera #2 Frame #132===================
17-02-28 20:28:32.061 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:32.099 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:28:32.099 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:28:32.099 -08 000000077 INF: ===================Camera #0 Frame #138===================
17-02-28 20:28:32.115 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:28:32.115 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:28:32.115 -08 000000083 INF: ===================Camera #2 Frame #139===================
17-02-28 20:28:32.199 -08 000000105 INF: Y Motor: Unshifted Position: 3460053
17-02-28 20:28:32.249 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:32.268 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:28:32.268 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:28:32.268 -08 000000077 INF: ===================Camera #0 Frame #144===================
17-02-28 20:28:32.287 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:28:32.287 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:28:32.287 -08 000000083 INF: ===================Camera #2 Frame #145===================
17-02-28 20:28:32.371 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:32.436 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:28:32.436 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:28:32.436 -08 000000077 INF: ===================Camera #0 Frame #151===================
17-02-28 20:28:32.456 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:28:32.456 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:28:32.456 -08 000000083 INF: ===================Camera #2 Frame #151===================
17-02-28 20:28:32.510 -08 000000105 INF: Y Motor: Unshifted Position: 3256387
17-02-28 20:28:32.560 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:32.607 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:28:32.607 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:28:32.607 -08 000000077 INF: ===================Camera #0 Frame #157===================
17-02-28 20:28:32.625 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:28:32.625 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:28:32.625 -08 000000083 INF: ===================Camera #2 Frame #157===================
17-02-28 20:28:32.684 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:32.775 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:28:32.775 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:28:32.775 -08 000000077 INF: ===================Camera #0 Frame #163===================
17-02-28 20:28:32.794 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:28:32.794 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:28:32.794 -08 000000083 INF: ===================Camera #2 Frame #164===================
17-02-28 20:28:32.820 -08 000000105 INF: Y Motor: Unshifted Position: 3054022
17-02-28 20:28:32.870 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:32.943 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 168, frameCount = 169.
17-02-28 20:28:32.943 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 169
17-02-28 20:28:32.943 -08 000000077 INF: ===================Camera #0 Frame #169===================
17-02-28 20:28:32.966 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:28:32.966 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:28:32.966 -08 000000083 INF: ===================Camera #2 Frame #170===================
17-02-28 20:28:32.997 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.111 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:28:33.111 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:28:33.111 -08 000000077 INF: ===================Camera #0 Frame #175===================
17-02-28 20:28:33.133 -08 000000105 INF: Y Motor: Unshifted Position: 2851229
17-02-28 20:28:33.135 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:28:33.135 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:28:33.135 -08 000000083 INF: ===================Camera #2 Frame #176===================
17-02-28 20:28:33.183 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.279 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:28:33.279 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:28:33.279 -08 000000077 INF: ===================Camera #0 Frame #182===================
17-02-28 20:28:33.304 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:28:33.304 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:28:33.304 -08 000000083 INF: ===================Camera #2 Frame #182===================
17-02-28 20:28:33.307 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.446 -08 000000105 INF: Y Motor: Unshifted Position: 2647774
17-02-28 20:28:33.450 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:28:33.450 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:28:33.450 -08 000000077 INF: ===================Camera #0 Frame #188===================
17-02-28 20:28:33.473 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:28:33.473 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:28:33.473 -08 000000083 INF: ===================Camera #2 Frame #189===================
17-02-28 20:28:33.496 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.618 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:28:33.618 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:28:33.618 -08 000000077 INF: ===================Camera #0 Frame #194===================
17-02-28 20:28:33.620 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.645 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:28:33.645 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:28:33.645 -08 000000083 INF: ===================Camera #2 Frame #195===================
17-02-28 20:28:33.756 -08 000000105 INF: Y Motor: Unshifted Position: 2446066
17-02-28 20:28:33.786 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:28:33.786 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:28:33.786 -08 000000077 INF: ===================Camera #0 Frame #200===================
17-02-28 20:28:33.806 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.814 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:28:33.814 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:28:33.814 -08 000000083 INF: ===================Camera #2 Frame #201===================
17-02-28 20:28:33.931 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:33.954 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:28:33.954 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:28:33.954 -08 000000077 INF: ===================Camera #0 Frame #206===================
17-02-28 20:28:33.983 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:28:33.983 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:28:33.983 -08 000000083 INF: ===================Camera #2 Frame #207===================
17-02-28 20:28:34.070 -08 000000105 INF: Y Motor: Unshifted Position: 2241315
17-02-28 20:28:34.120 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:34.122 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:28:34.122 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:28:34.122 -08 000000077 INF: ===================Camera #0 Frame #213===================
17-02-28 20:28:34.152 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:28:34.152 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:28:34.152 -08 000000083 INF: ===================Camera #2 Frame #214===================
17-02-28 20:28:34.246 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:34.293 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:28:34.293 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:28:34.293 -08 000000077 INF: ===================Camera #0 Frame #219===================
17-02-28 20:28:34.324 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:28:34.324 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:28:34.324 -08 000000083 INF: ===================Camera #2 Frame #220===================
17-02-28 20:28:34.380 -08 000000105 INF: Y Motor: Unshifted Position: 2040248
17-02-28 20:28:34.430 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:34.461 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:28:34.461 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:28:34.461 -08 000000077 INF: ===================Camera #0 Frame #225===================
17-02-28 20:28:34.493 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:28:34.493 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:28:34.493 -08 000000083 INF: ===================Camera #2 Frame #226===================
17-02-28 20:28:34.557 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:34.629 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:28:34.629 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:28:34.629 -08 000000077 INF: ===================Camera #0 Frame #231===================
17-02-28 20:28:34.662 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:28:34.662 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:28:34.662 -08 000000083 INF: ===================Camera #2 Frame #232===================
17-02-28 20:28:34.693 -08 000000105 INF: Y Motor: Unshifted Position: 1836795
17-02-28 20:28:34.743 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:34.797 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:28:34.797 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:28:34.797 -08 000000077 INF: ===================Camera #0 Frame #237===================
17-02-28 20:28:34.832 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:28:34.832 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:28:34.832 -08 000000083 INF: ===================Camera #2 Frame #239===================
17-02-28 20:28:34.867 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:34.965 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:28:34.965 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:28:34.965 -08 000000077 INF: ===================Camera #0 Frame #244===================
17-02-28 20:28:35.004 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:28:35.004 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:28:35.004 -08 000000083 INF: ===================Camera #2 Frame #245===================
17-02-28 20:28:35.006 -08 000000105 INF: Y Motor: Unshifted Position: 1633124
17-02-28 20:28:35.056 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:35.136 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:28:35.136 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:28:35.136 -08 000000077 INF: ===================Camera #0 Frame #250===================
17-02-28 20:28:35.173 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:28:35.173 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:28:35.173 -08 000000083 INF: ===================Camera #2 Frame #251===================
17-02-28 20:28:35.180 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:35.304 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:28:35.304 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:28:35.304 -08 000000077 INF: ===================Camera #0 Frame #256===================
17-02-28 20:28:35.316 -08 000000105 INF: Y Motor: Unshifted Position: 1431624
17-02-28 20:28:35.342 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:28:35.342 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:28:35.342 -08 000000083 INF: ===================Camera #2 Frame #258===================
17-02-28 20:28:35.366 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:35.472 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:28:35.472 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:28:35.472 -08 000000077 INF: ===================Camera #0 Frame #262===================
17-02-28 20:28:35.493 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:35.514 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:28:35.514 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:28:35.514 -08 000000083 INF: ===================Camera #2 Frame #264===================
17-02-28 20:28:35.629 -08 000000105 INF: Y Motor: Unshifted Position: 1227940
17-02-28 20:28:35.641 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:28:35.641 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:28:35.641 -08 000000077 INF: ===================Camera #0 Frame #269===================
17-02-28 20:28:35.679 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:35.685 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:28:35.685 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:28:35.685 -08 000000083 INF: ===================Camera #2 Frame #270===================
17-02-28 20:28:35.751 -08 000000036 INF: FPGA: Recv TDIYWAIT
17-02-28 20:28:35.751 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:35.753 -08 000000106 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:28:35.754 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:28:35.754 -08 000000032 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:28:35.754 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:28:35.754 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:28:35.754 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:28:35.754 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:28:35.754 -08 000000032 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:28:35.754 -08 000000032 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:28:35.754 -08 000000032 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:28:35.755 -08 000000032 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:28:35.803 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:35.813 -08 000000077 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:35.813 -08 000000077 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:35.813 -08 000000077 INF: ===================Camera #0 Frame #272===================
17-02-28 20:28:35.822 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:35.823 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:35.940 -08 000000105 INF: Y Motor: Unshifted Position: 1025800
17-02-28 20:28:35.953 -08 000000077 INF: Camera #0 ReleaseBuffer
17-02-28 20:28:35.953 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:35.953 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:35.953 -08 000000083 INF: ===================Camera #2 Frame #272===================
17-02-28 20:28:35.953 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:28:35.959 -08 000000083 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:35.960 -08 000000083 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:35.983 -08 000000077 INF: ======================================
17-02-28 20:28:35.990 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:36.127 -08 000000100 INF: FPGA: Recv EX2MV
17-02-28 20:28:36.127 -08 000000100 INF: FPGA: Recv EX1MV
17-02-28 20:28:36.127 -08 000000032 INF: Excitation Filter 1: Moved 107 steps in 372.6837 ms
17-02-28 20:28:36.127 -08 000000032 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.7974 ms
17-02-28 20:28:36.127 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 372.9799 ms
17-02-28 20:28:36.127 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.1551 ms
17-02-28 20:28:36.127 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2307 ms
17-02-28 20:28:36.127 -08 000000032 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.9757 ms
17-02-28 20:28:36.127 -08 000000082 INF: ======================================
17-02-28 20:28:36.128 -08 000000032 INF: ======================================
17-02-28 20:28:36.129 -08 000000105 INF: Y Motor: Unshifted Position: 993063
17-02-28 20:28:36.129 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:36.129 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:36.129 -08 000000106 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:36.130 -08 000000106 INF: ======================================
17-02-28 20:28:36.132 -08 000000083 INF: Camera #2 ReleaseBuffer
17-02-28 20:28:36.132 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:28:36.167 -08 000000083 INF: ======================================
17-02-28 20:28:36.168 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:28:36.169 -08 000000098 INF: ======================================
17-02-28 20:28:36.192 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:36.192 -08 000000105 INF: Y Motor: Moved to 14.9306 after 7862 ms
17-02-28 20:28:36.192 -08 000000105 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:36.253 -08 000000105 INF: Y Motor: Recv v 4097\r
17-02-28 20:28:36.253 -08 000000105 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:36.253 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:36.316 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:36.316 -08 000000105 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:36.316 -08 000000105 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:36.378 -08 000000105 INF: Y Motor: Recv v 134217728\r
17-02-28 20:28:36.378 -08 000000105 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:28:36.378 -08 000000105 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:36.378 -08 000000105 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:36.440 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:36.440 -08 000000105 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:36.440 -08 000000105 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:36.440 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:36.506 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:36.506 -08 000000105 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:36.506 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:36.565 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:36.565 -08 000000105 INF: ======================================
17-02-28 20:28:36.566 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:36.567 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:36.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:36.568 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:28:36.628 -08 000000090 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:28:36.628 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:36.690 -08 000000073 INF: FPGA: Recv TDIYERD 1493065
17-02-28 20:28:36.690 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:28:36.753 -08 000000060 INF: FPGA: Recv ZADCR 21182
17-02-28 20:28:36.753 -08 000000042 INF: At scan end Y pos = 14.931 and Z pos = -0.081. Y moved -48.539 mm
17-02-28 20:28:36.753 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:28:36.814 -08 000000070 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:28:36.814 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:28:36.814 -08 000000042 INF: TDIScan finished after 12642.2161 ms
17-02-28 20:28:36.814 -08 000000042 INF: Image[0]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:28:36.814 -08 000000042 INF: Image[2]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:28:36.816 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:36.850 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.426 um
17-02-28 20:28:36.850 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:36.851 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:28:36.876 -08 000000077 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:28:36.877 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:36.877 -08 000000089 INF: ===================Dither Clean Up Command===================
17-02-28 20:28:36.877 -08 000000098 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:28:36.877 -08 000000090 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:28:36.878 -08 000000099 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:28:36.878 -08 000000090 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:36.878 -08 000000090 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:36.878 -08 000000099 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:28:36.878 -08 000000099 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:28:36.878 -08 000000098 INF: ======================================
17-02-28 20:28:36.878 -08 000000070 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:36.878 -08 000000105 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:36.879 -08 000000070 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:28:36.881 -08 000000105 INF: ===================LFT:Extracting coords===================
17-02-28 20:28:36.906 -08 000000105 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:36.906 -08 000000105 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:28:36.907 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:28:36.907 -08 000000036 INF: ===================LookupFocusTracking===================
17-02-28 20:28:36.907 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:28:36.907 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:28:36.908 -08 000000102 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:36.908 -08 000000036 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:36.908 -08 000000047 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:36.908 -08 000000061 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:36.939 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:36.939 -08 000000100 INF: FPGA: Recv ZSEL 
17-02-28 20:28:36.939 -08 000000070 INF: FPGA: Xmit ZDACW 26335\n
17-02-28 20:28:36.939 -08 000000099 INF: ======================================
17-02-28 20:28:36.940 -08 000000090 INF: Y Motor: Recv ok\r
17-02-28 20:28:36.940 -08 000000090 INF: ======================================
17-02-28 20:28:36.982 -08 000000036 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:36.982 -08 000000061 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:36.982 -08 000000047 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:36.982 -08 000000102 INF: FC:B, C:3,L:4, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:37.000 -08 000000073 INF: FPGA: Recv ZDACW 
17-02-28 20:28:37.001 -08 000000070 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:28:37.001 -08 000000070 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:28:37.062 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:28:37.062 -08 000000070 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:37.063 -08 000000070 INF: ======================================
17-02-28 20:28:37.133 -08 000000036 INF: LFT found best fwhm score 2.002975 in 151 ms
17-02-28 20:28:37.133 -08 000000036 INF: LFT found good score at index 1145 with fwhm value 2.002975. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:4,B
17-02-28 20:28:37.133 -08 000000061 INF: LFT found best fwhm score 2.000098 in 151 ms
17-02-28 20:28:37.133 -08 000000061 INF: LFT found good score at index 4849 with fwhm value 2.000098. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:4,B
17-02-28 20:28:37.133 -08 000000036 INF: ===================LookupFocusTracking===================
17-02-28 20:28:37.133 -08 000000061 INF: ===================LookupFocusTracking===================
17-02-28 20:28:37.134 -08 000000047 INF: LFT found best fwhm score 2.000508 in 151 ms
17-02-28 20:28:37.134 -08 000000047 INF: LFT found good score at index 5565 with fwhm value 2.000508. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:4,B
17-02-28 20:28:37.134 -08 000000036 INF: ======================================
17-02-28 20:28:37.134 -08 000000047 INF: ===================LookupFocusTracking===================
17-02-28 20:28:37.134 -08 000000061 INF: ======================================
17-02-28 20:28:37.134 -08 000000047 INF: ======================================
17-02-28 20:28:37.135 -08 000000102 INF: LFT found best fwhm score 2.000184 in 152 ms
17-02-28 20:28:37.135 -08 000000102 INF: LFT found good score at index 825 with fwhm value 2.000184. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:4,B
17-02-28 20:28:37.135 -08 000000102 INF: ===================LookupFocusTracking===================
17-02-28 20:28:37.135 -08 000000102 INF: ======================================
17-02-28 20:28:37.137 -08 000000105 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:37.137 -08 000000105 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:4,B
17-02-28 20:28:37.138 -08 000000105 INF: ======================================
17-02-28 20:28:37.139 -08 000000089 INF: ======================================
17-02-28 20:28:37.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:37.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:28:37.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:37.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:28:37.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:28:37.143 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:28:37.143 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:28:37.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:28:37.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4, Swath 2 - X = 78.03118 Y = 39.78827===================
17-02-28 20:28:37.166 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:28:37.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:37.166 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:37.167 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:28:37.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 4===================
17-02-28 20:28:37.167 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:28:37.212 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":4,"Tile":2201,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF179","HCSMMF267","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.286 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.288 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.289 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:37.289 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:37.316 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:37.317 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.318 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:28:37.318 -08 000000042 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:28:37.320 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.325 -08 000000047 INF: ===================Move Tilt Motor 1===================
17-02-28 20:28:37.403 -08 000000047 INF: ======================================
17-02-28 20:28:37.403 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":4,"Tile":2211,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF208","HCSMMF192","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.405 -08 000000074 INF: ===================Move Tilt Motor 3===================
17-02-28 20:28:37.405 -08 000000089 INF: ===================Move Tilt Motor 2===================
17-02-28 20:28:37.406 -08 000000089 INF: ======================================
17-02-28 20:28:37.406 -08 000000074 INF: ======================================
17-02-28 20:28:37.406 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":4,"Tile":2203,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF268","HCSMMF204","HCSMMF270"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.408 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.409 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":4,"Tile":2202,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF247","HCSMMF216","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.410 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:37.413 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":4,"Tile":2208,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF251","HCSMMF230","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.415 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":4,"Tile":2205,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF199","HCSMMF178","HCSMMF269"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.416 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":4,"Tile":2204,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF203","HCSMMF225","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.421 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:28:37.422 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":4,"Tile":2209,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF196","HCSMMF254","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.425 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":4,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF256","HCSMMF241","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.426 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":4,"Tile":2213,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF255","HCSMMF285","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.427 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":4,"Tile":2218,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF260","HCSMMF237","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.428 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":4,"Tile":2214,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF279","HCSMMF195","HCSMMF242","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.429 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":4,"Tile":2219,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF176","HCSMMF215","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.430 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":4,"Tile":2216,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF262","HCSMMF185","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.431 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":4,"Tile":2206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF211","HCSMMF224","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.432 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":4,"Tile":2217,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF205","HCSMMF231","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.433 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":4,"Tile":2212,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF257","HCSMMF202","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.434 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:28:37.434 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:28:37.434 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:28:37.434 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":4,"Tile":2225,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF217","HCSMMF246","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:37.434 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:37.438 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:28:37.438 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:28:37.438 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:28:37.441 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":4,"Tile":2210,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF287","HCSMMF263","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.443 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":4,"Tile":2215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF229","HCSMMF227","HCSMMF283","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.444 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":4,"Tile":2226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF238","HCSMMF244","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.445 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":4,"Tile":2223,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF281","HCSMMF258","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.446 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":4,"Tile":2220,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF234","HCSMMF250","HCSMMF213"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.447 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":4,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF219","HCSMMF253","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.448 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":4,"Tile":2224,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF209","HCSMMF278","HCSMMF212"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.449 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":4,"Tile":2228,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF276","HCSMMF184","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.449 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":4,"Tile":2221,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF200","HCSMMF266","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.452 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 4 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":4,"Tile":2227,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF214","HCSMMF218","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:37.453 -08 000000073 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:37.453 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:37.454 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:28:37.454 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1005 mm
17-02-28 20:28:37.454 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:28:37.454 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.461 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:28:37.515 -08 000000089 INF: FPGA: Recv ZTRG 
17-02-28 20:28:37.515 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:28:37.552 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.552 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:28:37.577 -08 000000077 INF: FPGA: Recv ZYT 
17-02-28 20:28:37.577 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:28:37.577 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:28:37.590 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.596 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:28:37.643 -08 000000070 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:28:37.643 -08 000000070 INF: FPGA: Recv ZMV 
17-02-28 20:28:37.643 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:28:37.643 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.9657 ms
17-02-28 20:28:37.643 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:28:37.685 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.691 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:28:37.702 -08 000000095 INF: FPGA: Recv ZDACR 60292
17-02-28 20:28:37.702 -08 000000042 INF: Z Motor: MoveAndTrigger took 248.3131 ms w/comms
17-02-28 20:28:37.702 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:28:37.702 -08 000000042 INF: Z Motor: MoveAbsStepped took 248.4903 ms
17-02-28 20:28:37.702 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:37.703 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:28:37.712 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:28:37.712 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:37.712 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:37.712 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:28:37.712 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:28:37.764 -08 000000032 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:37.775 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:37.775 -08 000000042 INF: Transformed XStagePosition from 80.24564 mm to 80.2456359863281 mm.
17-02-28 20:28:37.781 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.786 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:28:37.786 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:37.786 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:28:37.786 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:28:37.788 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:37.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:28:37.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:37.789 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = E_1
17-02-28 20:28:37.789 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:37.790 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:37.791 -08 000000074 INF: ===================MoveEmissionFilters===================
17-02-28 20:28:37.791 -08 000000099 INF: ===================Move X,Y===================
17-02-28 20:28:37.791 -08 000000060 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:37.791 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:37.792 -08 000000084 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:37.792 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:37.792 -08 000000099 INF: ===================Move X,Y, Parallel===================
17-02-28 20:28:37.792 -08 000000060 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:37.792 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:37.792 -08 000000084 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:37.793 -08 000000036 INF: ===================Move X Motor without settling===================
17-02-28 20:28:37.793 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:37.793 -08 000000036 INF: X Motor: Xmit PR VM\n
17-02-28 20:28:37.793 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:37.793 -08 000000077 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9306 mm
17-02-28 20:28:37.793 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:37.793 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:37.793 -08 000000052 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:28:37.793 -08 000000090 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:28:37.793 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:28:37.793 -08 000000068 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:28:37.793 -08 000000086 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:28:37.793 -08 000000105 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:28:37.793 -08 000000052 INF: ======================================
17-02-28 20:28:37.794 -08 000000051 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:28:37.794 -08 000000044 INF: ======================================
17-02-28 20:28:37.794 -08 000000029 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:28:37.794 -08 000000051 INF: ======================================
17-02-28 20:28:37.794 -08 000000090 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:28:37.794 -08 000000105 INF: ======================================
17-02-28 20:28:37.794 -08 000000090 INF: ======================================
17-02-28 20:28:37.795 -08 000000029 INF: ======================================
17-02-28 20:28:37.795 -08 000000060 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:37.796 -08 000000091 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:37.796 -08 000000060 INF: ======================================
17-02-28 20:28:37.796 -08 000000086 INF: ======================================
17-02-28 20:28:37.797 -08 000000068 INF: ======================================
17-02-28 20:28:37.797 -08 000000091 INF: ======================================
17-02-28 20:28:37.798 -08 000000084 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:37.798 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:37.799 -08 000000084 INF: ======================================
17-02-28 20:28:37.799 -08 000000083 INF: ======================================
17-02-28 20:28:37.800 -08 000000074 INF: ======================================
17-02-28 20:28:37.831 -08 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:28:37.831 -08 000000036 INF: X Motor: Xmit PR VI\n
17-02-28 20:28:37.831 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:28:37.831 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:37.831 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:37.871 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:37.893 -08 000000036 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:28:37.893 -08 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:28:37.893 -08 000000036 INF: X Motor: Moving to 80.2456 mm @15.000 mm/sec, started at 78.0088 mm
17-02-28 20:28:37.893 -08 000000036 INF: X Motor: Xmit MA 8702\n
17-02-28 20:28:37.894 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:28:37.894 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:37.957 -08 000000036 INF: X Motor: Recv MA 8702\r\n>
17-02-28 20:28:37.957 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:28:37.957 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:37.957 -08 000000036 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:28:37.957 -08 000000077 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:28:37.957 -08 000000077 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:28:38.018 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:28:38.018 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:28:38.018 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:38.080 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:28:38.080 -08 000000077 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:28:38.080 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:38.171 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:28:38.205 -08 000000077 INF: Y Motor: Unshifted Position: 1075477
17-02-28 20:28:38.255 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:38.379 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:38.515 -08 000000077 INF: Y Motor: Unshifted Position: 1777234
17-02-28 20:28:38.565 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:38.581 -08 000000036 INF: X Motor: Xmit PR ER\n
17-02-28 20:28:38.640 -08 000000036 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:28:38.640 -08 000000036 INF: X Motor: Moved to 80.2451 after 683 ms
17-02-28 20:28:38.640 -08 000000036 INF: ======================================
17-02-28 20:28:38.690 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:38.829 -08 000000077 INF: Y Motor: Unshifted Position: 2562254
17-02-28 20:28:38.879 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.003 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.140 -08 000000077 INF: Y Motor: Unshifted Position: 3338026
17-02-28 20:28:39.190 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.319 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.453 -08 000000077 INF: Y Motor: Unshifted Position: 4125595
17-02-28 20:28:39.503 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.627 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.763 -08 000000077 INF: Y Motor: Unshifted Position: 4898863
17-02-28 20:28:39.813 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:39.940 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:40.077 -08 000000077 INF: Y Motor: Unshifted Position: 5682185
17-02-28 20:28:40.127 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:40.251 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:40.387 -08 000000077 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:28:40.387 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:40.387 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:40.449 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:28:40.449 -08 000000077 INF: Y Motor: Moved to 64.5335 after 2369 ms
17-02-28 20:28:40.449 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:40.514 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:28:40.514 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:40.514 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:40.576 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:28:40.576 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:40.576 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:40.638 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:28:40.638 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:28:40.638 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:40.638 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:40.700 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:28:40.700 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:40.700 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:40.700 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:40.762 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:28:40.762 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:40.762 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:40.824 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:28:40.824 -08 000000077 INF: ======================================
17-02-28 20:28:40.825 -08 000000099 INF: ===================Move X,Y===================
17-02-28 20:28:40.826 -08 000000099 INF: ======================================
17-02-28 20:28:40.828 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:40.829 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:40.829 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:28:40.829 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:28:40.886 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:40.886 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:28:40.949 -08 000000028 INF: FPGA: Recv ZFREQCL
17-02-28 20:28:40.949 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:28:40.950 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:40.950 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:41.011 -08 000000056 INF: FPGA: Recv TDIYERD 6453353
17-02-28 20:28:41.011 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453353 counts (64.534 mm)
17-02-28 20:28:41.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:41.012 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:41.013 -08 000000037 INF: ===================TDI Scan Setup===================
17-02-28 20:28:41.013 -08 000000039 INF: ===================Set YMotor gains for scans===================
17-02-28 20:28:41.014 -08 000000037 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:28:41.014 -08 000000039 INF: ======================================
17-02-28 20:28:41.014 -08 000000037 INF: ===================TDI Scan Setup===================
17-02-28 20:28:41.015 -08 000000037 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:28:41.016 -08 000000037 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:28:41.016 -08 000000037 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:28:41.074 -08 000000028 INF: FPGA: Recv TDIYPOS
17-02-28 20:28:41.074 -08 000000037 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:28:41.077 -08 000000037 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:28:41.077 -08 000000037 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:28:41.154 -08 000000088 INF: FPGA: Recv TDIYARM2
17-02-28 20:28:41.155 -08 000000037 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:28:41.156 -08 000000037 INF: ===================TDI Scan Setup===================
17-02-28 20:28:41.157 -08 000000037 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:28:41.158 -08 000000037 INF: ===================TDI Scan Setup===================
17-02-28 20:28:41.159 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:28:41.160 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:28:41.160 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:41.529 -08 000000037 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:28:41.529 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:28:41.530 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:41.545 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:28:41.548 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:41.937 -08 000000037 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821912664 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:28:41.938 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:28:41.938 -08 000000037 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:41.953 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:28:41.955 -08 000000037 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:28:41.956 -08 000000037 INF: ===================TDI Scan Setup===================
17-02-28 20:28:41.957 -08 000000037 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:41.958 -08 000000037 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:28:41.958 -08 000000037 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:41.960 -08 000000037 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:28:41.960 -08 000000037 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:28:41.960 -08 000000037 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:28:41.960 -08 000000037 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:28:42.025 -08 000000047 INF: FPGA: Recv ZYT 
17-02-28 20:28:42.025 -08 000000037 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:28:42.025 -08 000000037 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:28:42.087 -08 000000088 INF: FPGA: Recv ZARM
17-02-28 20:28:42.087 -08 000000037 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9253 ms
17-02-28 20:28:42.087 -08 000000037 INF: Z Motor: ArmAbsStepped took 127.6628 ms
17-02-28 20:28:42.088 -08 000000037 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:42.089 -08 000000037 INF: ===================TDI Scan Setup===================
17-02-28 20:28:42.090 -08 000000037 INF: ======================================
17-02-28 20:28:42.091 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:42.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:42.093 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:42.094 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:42.095 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:42.096 -08 000000080 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:28:42.096 -08 000000100 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:28:42.096 -08 000000080 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:28:42.096 -08 000000080 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:28:42.097 -08 000000080 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:28:42.097 -08 000000100 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:28:42.097 -08 000000100 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:28:42.097 -08 000000100 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:28:42.097 -08 000000080 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:28:42.098 -08 000000100 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:28:42.462 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:28:42.462 -08 000000077 INF: FPGA: Recv EX1MV
17-02-28 20:28:42.462 -08 000000100 INF: Excitation Filter 1: Moved -107 steps in 365.3024 ms
17-02-28 20:28:42.462 -08 000000100 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 365.4568 ms
17-02-28 20:28:42.462 -08 000000100 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 365.6042 ms
17-02-28 20:28:42.462 -08 000000080 INF: Excitation Filter 2: Moved -107 steps in 365.5662 ms
17-02-28 20:28:42.462 -08 000000080 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.908 ms
17-02-28 20:28:42.462 -08 000000080 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.027 ms
17-02-28 20:28:42.463 -08 000000100 INF: ======================================
17-02-28 20:28:42.463 -08 000000080 INF: ======================================
17-02-28 20:28:42.465 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:42.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:42.467 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:28:42.467 -08 000000036 INF: ===================Serial===================
17-02-28 20:28:42.467 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:42.467 -08 000000033 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:42.468 -08 000000106 INF: ===================Camera TDI, Parallel===================
17-02-28 20:28:42.468 -08 000000033 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:28:42.468 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:42.468 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:42.468 -08 000000036 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:28:42.468 -08 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:28:42.469 -08 000000036 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:28:42.469 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:28:42.469 -08 000000088 INF: ===================Camera TDI===================
17-02-28 20:28:42.469 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.469 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.470 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.470 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.474 -08 000000082 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:28:42.527 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:42.527 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:42.527 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:42.588 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:42.588 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:42.620 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.620 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.620 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.620 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.650 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:42.650 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:42.650 -08 000000033 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:28:42.650 -08 000000033 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:28:42.712 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:42.712 -08 000000033 INF: Y Motor: Start the move command
17-02-28 20:28:42.712 -08 000000033 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:42.770 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.770 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.770 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.770 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.774 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:42.774 -08 000000033 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:28:42.774 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:42.901 -08 000000033 INF: Y Motor: Unshifted Position: 5935330
17-02-28 20:28:42.920 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.920 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:42.920 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.920 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:42.951 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.070 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:28:43.070 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:28:43.070 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:28:43.070 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:28:43.070 -08 000000051 INF: ===================Camera #0 Frame #1===================
17-02-28 20:28:43.070 -08 000000088 INF: ===================Camera #2 Frame #1===================
17-02-28 20:28:43.073 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.212 -08 000000033 INF: Y Motor: Unshifted Position: 5888227
17-02-28 20:28:43.224 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:28:43.224 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:28:43.224 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:28:43.224 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:28:43.224 -08 000000088 INF: ===================Camera #2 Frame #3===================
17-02-28 20:28:43.224 -08 000000051 INF: ===================Camera #0 Frame #3===================
17-02-28 20:28:43.262 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.382 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:28:43.382 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:28:43.382 -08 000000088 INF: ===================Camera #2 Frame #4===================
17-02-28 20:28:43.383 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:28:43.383 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:28:43.383 -08 000000051 INF: ===================Camera #0 Frame #4===================
17-02-28 20:28:43.386 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.525 -08 000000033 INF: Y Motor: Unshifted Position: 5841669
17-02-28 20:28:43.536 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:43.536 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:43.536 -08 000000051 INF: ===================Camera #0 Frame #5===================
17-02-28 20:28:43.537 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:43.537 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:43.537 -08 000000088 INF: ===================Camera #2 Frame #5===================
17-02-28 20:28:43.575 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.585 -08 000000080 INF: FPGA: Recv ZWAIT 
17-02-28 20:28:43.585 -08 000000080 INF: FPGA: Recv TDIYWAIT
17-02-28 20:28:43.586 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:43.586 -08 000000036 INF: ===================Serial===================
17-02-28 20:28:43.587 -08 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:28:43.588 -08 000000036 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:28:43.588 -08 000000060 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:28:43.589 -08 000000047 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:28:43.589 -08 000000036 INF: ===================Serial===================
17-02-28 20:28:43.589 -08 000000060 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:28:43.589 -08 000000047 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:28:43.589 -08 000000047 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:28:43.589 -08 000000047 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:28:43.589 -08 000000047 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:28:43.589 -08 000000060 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:28:43.589 -08 000000060 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:28:43.590 -08 000000036 INF: ======================================
17-02-28 20:28:43.590 -08 000000060 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:28:43.689 -08 000000051 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:28:43.689 -08 000000051 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:28:43.689 -08 000000051 INF: ===================Camera #0 Frame #6===================
17-02-28 20:28:43.692 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:28:43.692 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:28:43.692 -08 000000088 INF: ===================Camera #2 Frame #6===================
17-02-28 20:28:43.693 -08 000000051 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:28:43.694 -08 000000051 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:43.695 -08 000000088 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:28:43.696 -08 000000088 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:43.699 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.718 -08 000000051 INF: Camera #0 ReleaseBuffer
17-02-28 20:28:43.718 -08 000000051 INF: ===================Camera TDI===================
17-02-28 20:28:43.719 -08 000000051 INF: ======================================
17-02-28 20:28:43.743 -08 000000088 INF: Camera #2 ReleaseBuffer
17-02-28 20:28:43.743 -08 000000088 INF: ===================Camera TDI===================
17-02-28 20:28:43.744 -08 000000088 INF: ======================================
17-02-28 20:28:43.746 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:28:43.747 -08 000000106 INF: ======================================
17-02-28 20:28:43.835 -08 000000033 INF: Y Motor: Unshifted Position: 5797052
17-02-28 20:28:43.885 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:43.957 -08 000000073 INF: FPGA: Recv EX1MV
17-02-28 20:28:43.957 -08 000000073 INF: FPGA: Recv EX2MV
17-02-28 20:28:43.957 -08 000000060 INF: Excitation Filter 2: Moved 107 steps in 367.9787 ms
17-02-28 20:28:43.957 -08 000000060 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.4068 ms
17-02-28 20:28:43.957 -08 000000060 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.5912 ms
17-02-28 20:28:43.957 -08 000000047 INF: Excitation Filter 1: Moved 107 steps in 368.2069 ms
17-02-28 20:28:43.957 -08 000000047 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.6782 ms
17-02-28 20:28:43.957 -08 000000047 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 368.7653 ms
17-02-28 20:28:43.958 -08 000000060 INF: ======================================
17-02-28 20:28:43.958 -08 000000047 INF: ======================================
17-02-28 20:28:43.959 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:43.960 -08 000000082 INF: ======================================
17-02-28 20:28:44.024 -08 000000033 INF: Y Motor: Unshifted Position: 5797042
17-02-28 20:28:44.024 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:44.024 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:44.086 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:44.086 -08 000000033 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:28:44.086 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:44.148 -08 000000033 INF: Y Motor: Recv v 4097\r
17-02-28 20:28:44.148 -08 000000033 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:44.148 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:44.210 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:44.210 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:44.210 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:44.272 -08 000000033 INF: Y Motor: Recv v 134217728\r
17-02-28 20:28:44.272 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:28:44.272 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:44.272 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:44.335 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:28:44.335 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:44.335 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:44.335 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:44.398 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:44.398 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:44.398 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:44.458 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:28:44.458 -08 000000033 INF: ======================================
17-02-28 20:28:44.459 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:44.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:28:44.461 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.461 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:28:44.521 -08 000000037 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:28:44.521 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:44.583 -08 000000083 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:28:44.583 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:28:44.647 -08 000000098 INF: FPGA: Recv ZADCR 2421
17-02-28 20:28:44.648 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:28:44.648 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:28:44.707 -08 000000095 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:28:44.707 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:28:44.707 -08 000000042 INF: TDIScan finished after 6932.5631 ms
17-02-28 20:28:44.707 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:28:44.707 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:28:44.708 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:28:44.769 -08 000000056 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:28:44.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.771 -08 000000080 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:28:44.771 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:28:44.771 -08 000000106 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:28:44.772 -08 000000080 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:44.772 -08 000000080 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:44.772 -08 000000106 INF: ======================================
17-02-28 20:28:44.772 -08 000000086 INF: ======================================
17-02-28 20:28:44.833 -08 000000080 INF: Y Motor: Recv ok\r
17-02-28 20:28:44.833 -08 000000080 INF: ======================================
17-02-28 20:28:44.834 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.835 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:28:44.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:28:44.903 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.903 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:28:44.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:28:44.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:28:44.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:44.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:44.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:28:44.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:44.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:28:44.970 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:28:45.656 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1, Selecting focus point===================
17-02-28 20:28:45.678 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0805951988643565Best Z position at top surface = -0.151996248320617Best Z position at top surface + compensator offset = -0.129296248320617 C:3,L:5,B
17-02-28 20:28:45.680 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.151996248320617
17-02-28 20:28:45.680 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.9383
17-02-28 20:28:45.680 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0805951988643565
17-02-28 20:28:45.680 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59467
17-02-28 20:28:45.680 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0805951988643565.
17-02-28 20:28:45.680 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:45.814 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:28:45.814 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:28:45.830 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:45.830 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Focus Point 1===================
17-02-28 20:28:45.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.832 -08 000000042 INF: Lane 5, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:28:45.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.833 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.833 -08 000000082 INF: ===================Move Tilt Motor 1===================
17-02-28 20:28:45.833 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:28:45.834 -08 000000028 INF: ===================Move Tilt Motor 2===================
17-02-28 20:28:45.834 -08 000000082 INF: ======================================
17-02-28 20:28:45.834 -08 000000028 INF: ======================================
17-02-28 20:28:45.835 -08 000000087 INF: ======================================
17-02-28 20:28:45.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.836 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.837 -08 000000042 INF: ETF Best Z: -0.0805952 mm (21127 DAC)
17-02-28 20:28:45.837 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.838 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:28:45.838 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.839 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:45.845 -08 000000042 INF: Swath 1 position calculated to be: {X=79.68818, Y=39.78827} from estimated center X= 80.20699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:28:45.845 -08 000000042 INF: Swath 2 position calculated to be: {X=80.79618, Y=39.78827} from estimated center X= 80.20699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:28:46.277 -08 000000042 INF: Swath 0: Converted transform from (-44.99995, 3.295474) pixels to (-0.015525, 0.001035) mm.
17-02-28 20:28:46.282 -08 000000042 INF: Swath 1: Converted transform from (-66.91998, -0.2560229) pixels to (-0.023115, 0) mm.
17-02-28 20:28:46.283 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:28:46.284 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:28:46.284 -08 000000042 INF: Transformed XStagePosition from 79.68818 mm to 79.6726540159434 mm.
17-02-28 20:28:46.296 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5793128014784 mm.
17-02-28 20:28:46.296 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3793128014784 mm.
17-02-28 20:28:46.296 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4700628014784 mm.
17-02-28 20:28:46.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:46.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:28:46.298 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:46.298 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = E_1
17-02-28 20:28:46.304 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:46.305 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:46.306 -08 000000100 INF: ===================MoveEmissionFilters===================
17-02-28 20:28:46.306 -08 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:46.306 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:28:46.306 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:46.307 -08 000000088 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:46.307 -08 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:28:46.307 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:46.307 -08 000000082 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:46.307 -08 000000047 INF: ===================Move X,Y, Parallel===================
17-02-28 20:28:46.307 -08 000000034 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:28:46.307 -08 000000034 INF: Z Motor: Moving to -0.1006 mm, started at -0.0100 mm
17-02-28 20:28:46.307 -08 000000034 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:28:46.307 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:46.307 -08 000000088 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:46.307 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:46.308 -08 000000082 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:46.308 -08 000000087 INF: ===================Move X Motor without settling===================
17-02-28 20:28:46.308 -08 000000062 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:46.308 -08 000000087 INF: X Motor: Xmit PR VM\n
17-02-28 20:28:46.308 -08 000000083 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:28:46.308 -08 000000062 INF: Y Motor: Moving to 64.5793 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:28:46.308 -08 000000050 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:28:46.308 -08 000000091 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:28:46.308 -08 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:28:46.308 -08 000000032 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:28:46.309 -08 000000039 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:28:46.309 -08 000000030 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:28:46.309 -08 000000062 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:46.309 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:46.309 -08 000000091 INF: ======================================
17-02-28 20:28:46.309 -08 000000030 INF: ======================================
17-02-28 20:28:46.309 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:28:46.309 -08 000000074 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:28:46.309 -08 000000039 INF: ======================================
17-02-28 20:28:46.311 -08 000000083 INF: ======================================
17-02-28 20:28:46.311 -08 000000074 INF: ======================================
17-02-28 20:28:46.311 -08 000000082 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:46.312 -08 000000044 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:46.312 -08 000000050 INF: ======================================
17-02-28 20:28:46.313 -08 000000032 INF: ======================================
17-02-28 20:28:46.313 -08 000000082 INF: ======================================
17-02-28 20:28:46.313 -08 000000044 INF: ======================================
17-02-28 20:28:46.313 -08 000000056 INF: ======================================
17-02-28 20:28:46.314 -08 000000088 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:46.315 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:46.315 -08 000000088 INF: ======================================
17-02-28 20:28:46.316 -08 000000036 INF: ======================================
17-02-28 20:28:46.317 -08 000000100 INF: ======================================
17-02-28 20:28:46.331 -08 000000068 INF: FPGA: Recv ZTRG 
17-02-28 20:28:46.331 -08 000000034 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:28:46.393 -08 000000032 INF: FPGA: Recv ZYT 
17-02-28 20:28:46.393 -08 000000034 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:28:46.393 -08 000000034 INF: FPGA: Xmit ZMV 26370\n
17-02-28 20:28:46.395 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:28:46.395 -08 000000062 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:46.395 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:46.395 -08 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:28:46.395 -08 000000087 INF: X Motor: Xmit PR VI\n
17-02-28 20:28:46.455 -08 000000084 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:28:46.455 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:28:46.457 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:28:46.457 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:46.457 -08 000000087 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:28:46.457 -08 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:28:46.457 -08 000000087 INF: X Motor: Moving to 79.6727 mm @15.000 mm/sec, started at 80.2451 mm
17-02-28 20:28:46.457 -08 000000087 INF: X Motor: Xmit MA 8468\n
17-02-28 20:28:46.517 -08 000000036 INF: FPGA: Recv ZMV 
17-02-28 20:28:46.517 -08 000000034 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.0475 ms
17-02-28 20:28:46.517 -08 000000034 INF: FPGA: Xmit ZDACR\n
17-02-28 20:28:46.519 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:28:46.519 -08 000000062 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:46.519 -08 000000062 INF: Y Motor: Set target position to 5957931 encoder counts
17-02-28 20:28:46.519 -08 000000062 INF: Y Motor: Xmit s r0xca 5957931\r
17-02-28 20:28:46.520 -08 000000087 INF: X Motor: Recv MA 8468\r\n>
17-02-28 20:28:46.520 -08 000000087 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:28:46.579 -08 000000098 INF: FPGA: Recv ZDACR 26370
17-02-28 20:28:46.579 -08 000000034 INF: Z Motor: MoveAndTrigger took 271.1101 ms w/comms
17-02-28 20:28:46.579 -08 000000034 INF: Z Motor: After move to -0.1006, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:28:46.579 -08 000000034 INF: Z Motor: MoveAbsStepped took 271.2694 ms
17-02-28 20:28:46.580 -08 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:46.581 -08 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:28:46.582 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:28:46.582 -08 000000062 INF: Y Motor: Start the move command
17-02-28 20:28:46.582 -08 000000062 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:46.582 -08 000000032 INF: ===================Camera Arm TDI===================
17-02-28 20:28:46.582 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:28:46.583 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:46.583 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:46.584 -08 000000095 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:46.584 -08 000000032 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:46.584 -08 000000095 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:46.584 -08 000000095 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:28:46.643 -08 000000077 INF: FPGA: Recv ZSEL 
17-02-28 20:28:46.644 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:28:46.644 -08 000000062 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:28:46.644 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:46.644 -08 000000095 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:46.645 -08 000000095 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:28:46.706 -08 000000068 INF: FPGA: Recv TDIBB
17-02-28 20:28:46.706 -08 000000095 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:46.707 -08 000000095 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:46.708 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:46.709 -08 000000095 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:28:46.709 -08 000000095 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:28:46.710 -08 000000095 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:28:46.768 -08 000000036 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:46.768 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:46.770 -08 000000062 INF: Y Motor: Unshifted Position: 5882315
17-02-28 20:28:46.770 -08 000000095 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:28:46.770 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:46.772 -08 000000095 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:28:46.772 -08 000000095 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:28:46.772 -08 000000095 INF: Z Motor: Arming to move to -0.0606 mm
17-02-28 20:28:46.772 -08 000000095 INF: FPGA: Xmit ZYT 6437931 4\n
17-02-28 20:28:46.820 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:46.830 -08 000000099 INF: FPGA: Recv ZYT 
17-02-28 20:28:46.830 -08 000000095 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6382315 enc / 63.823 mm / ) = 6437931 enc / 64.379 mm
17-02-28 20:28:46.830 -08 000000095 INF: FPGA: Xmit ZARM 15884\n
17-02-28 20:28:46.892 -08 000000061 INF: FPGA: Recv ZARM
17-02-28 20:28:46.892 -08 000000095 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9086 ms
17-02-28 20:28:46.892 -08 000000095 INF: Z Motor: ArmAbsStepped took 119.4919 ms
17-02-28 20:28:46.892 -08 000000095 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:46.893 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:28:46.895 -08 000000095 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:28:46.895 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:28:46.897 -08 000000095 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:28:46.897 -08 000000095 INF: ===================TDI Scan Setup===================
17-02-28 20:28:46.898 -08 000000095 INF: ======================================
17-02-28 20:28:46.944 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:46.956 -08 000000087 INF: X Motor: Xmit PR ER\n
17-02-28 20:28:47.018 -08 000000087 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:28:47.018 -08 000000087 INF: X Motor: Moved to 79.6738 after 498 ms
17-02-28 20:28:47.018 -08 000000087 INF: ======================================
17-02-28 20:28:47.080 -08 000000062 INF: Y Motor: Unshifted Position: 5957932
17-02-28 20:28:47.080 -08 000000062 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:47.080 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:47.145 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:28:47.145 -08 000000062 INF: Y Motor: Moved to 64.5793 after 501 ms
17-02-28 20:28:47.145 -08 000000062 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:47.207 -08 000000062 INF: Y Motor: Recv v 4096\r
17-02-28 20:28:47.207 -08 000000062 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:47.207 -08 000000062 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:47.269 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:28:47.269 -08 000000062 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:47.269 -08 000000062 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:47.332 -08 000000062 INF: Y Motor: Recv v 402653184\r
17-02-28 20:28:47.332 -08 000000062 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:28:47.332 -08 000000062 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:47.332 -08 000000062 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:47.394 -08 000000062 INF: Y Motor: Recv v 0\r
17-02-28 20:28:47.394 -08 000000062 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:47.394 -08 000000062 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:47.394 -08 000000062 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:47.456 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:28:47.456 -08 000000062 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:47.456 -08 000000062 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:47.518 -08 000000062 INF: Y Motor: Recv ok\r
17-02-28 20:28:47.518 -08 000000062 INF: ======================================
17-02-28 20:28:47.519 -08 000000047 INF: ===================Move X,Y===================
17-02-28 20:28:47.520 -08 000000047 INF: ======================================
17-02-28 20:28:47.541 -08 000000032 INF: Camera #0 AttachBuffer (imageDataPtr = 56926015536 imgPtr = 56926015536 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:47.541 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:47.541 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:47.556 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:47.558 -08 000000032 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:48.597 -08 000000032 INF: Camera #2 AttachBuffer (imageDataPtr = 58737954864 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:48.597 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:48.597 -08 000000032 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:48.612 -08 000000032 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:48.614 -08 000000032 INF: ===================Camera Arm TDI===================
17-02-28 20:28:48.615 -08 000000032 INF: ======================================
17-02-28 20:28:48.616 -08 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:48.617 -08 000000034 INF: ======================================
17-02-28 20:28:48.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:48.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:48.619 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:28:48.619 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:28:48.703 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:28:48.703 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:28:48.763 -08 000000077 INF: FPGA: Recv ZFREQCL
17-02-28 20:28:48.763 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:28:48.763 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:48.763 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:48.825 -08 000000037 INF: FPGA: Recv TDIYERD 6457932
17-02-28 20:28:48.825 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457932 counts (64.579 mm)
17-02-28 20:28:48.825 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:48.826 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:48.826 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:28:48.826 -08 000000056 INF: ===================Set YMotor gains for scans===================
17-02-28 20:28:48.827 -08 000000056 INF: ======================================
17-02-28 20:28:48.827 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:48.828 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:28:48.828 -08 000000095 INF: FPGA: Xmit TDIYPOS 6347006\n
17-02-28 20:28:48.891 -08 000000080 INF: FPGA: Recv TDIYPOS
17-02-28 20:28:48.891 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:48.892 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:28:48.892 -08 000000095 INF: FPGA: Xmit TDIYARM3 139264 6437931 1 1\n
17-02-28 20:28:48.952 -08 000000032 INF: FPGA: Recv TDIYARM3
17-02-28 20:28:48.952 -08 000000095 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:28:48.953 -08 000000095 INF: ===================TDI FPGA Arm===================
17-02-28 20:28:48.954 -08 000000095 INF: ======================================
17-02-28 20:28:48.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:28:48.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:48.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:48.956 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:48.957 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:48.958 -08 000000099 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:28:48.958 -08 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:28:48.958 -08 000000099 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:28:48.958 -08 000000099 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:28:48.958 -08 000000099 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:28:48.958 -08 000000099 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:28:48.958 -08 000000086 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:28:48.958 -08 000000086 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:28:48.958 -08 000000086 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:28:48.959 -08 000000086 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:28:49.389 -08 000000095 INF: FPGA: Recv EX2MV
17-02-28 20:28:49.389 -08 000000095 INF: FPGA: Recv EX1MV
17-02-28 20:28:49.389 -08 000000086 INF: Excitation Filter 1: Moved -107 steps in 430.5955 ms
17-02-28 20:28:49.389 -08 000000099 INF: Excitation Filter 2: Moved -107 steps in 430.7784 ms
17-02-28 20:28:49.389 -08 000000099 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.9308 ms
17-02-28 20:28:49.389 -08 000000099 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 431.0023 ms
17-02-28 20:28:49.389 -08 000000086 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 430.7085 ms
17-02-28 20:28:49.389 -08 000000086 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 431.1092 ms
17-02-28 20:28:49.389 -08 000000099 INF: ======================================
17-02-28 20:28:49.390 -08 000000086 INF: ======================================
17-02-28 20:28:49.390 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:49.392 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:49.392 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:28:49.392 -08 000000061 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:49.392 -08 000000030 INF: ===================FPGA Z Wait===================
17-02-28 20:28:49.392 -08 000000105 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:49.393 -08 000000030 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:28:49.393 -08 000000105 INF: Y Motor: Moving to 14.9310 mm @6.500 mm/sec, started at 64.5793 mm
17-02-28 20:28:49.393 -08 000000105 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:49.393 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:49.393 -08 000000038 INF: ===================Camera TDI, Parallel===================
17-02-28 20:28:49.393 -08 000000061 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:28:49.394 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:28:49.394 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:28:49.395 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:49.396 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:49.396 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:49.396 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:49.399 -08 000000061 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:28:49.455 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:49.455 -08 000000105 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:49.455 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:49.515 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:49.515 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:49.546 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:49.546 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:49.546 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:49.546 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:49.579 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:49.579 -08 000000105 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:49.579 -08 000000105 INF: Y Motor: Set target position to 993098 encoder counts
17-02-28 20:28:49.579 -08 000000105 INF: Y Motor: Xmit s r0xca 993098\r
17-02-28 20:28:49.639 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:49.639 -08 000000105 INF: Y Motor: Start the move command
17-02-28 20:28:49.639 -08 000000105 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:49.696 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:49.696 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:28:49.696 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:49.696 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:28:49.703 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:49.703 -08 000000105 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:28:49.703 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:49.762 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:28:49.762 -08 000000030 INF: ======================================
17-02-28 20:28:49.828 -08 000000105 INF: Y Motor: Unshifted Position: 5896083
17-02-28 20:28:49.846 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:49.846 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:49.846 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:28:49.846 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:28:49.846 -08 000000106 INF: ===================Camera #0 Frame #5===================
17-02-28 20:28:49.846 -08 000000100 INF: ===================Camera #2 Frame #5===================
17-02-28 20:28:49.878 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.002 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.011 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:28:50.011 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:28:50.011 -08 000000106 INF: ===================Camera #0 Frame #11===================
17-02-28 20:28:50.012 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:28:50.012 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:28:50.012 -08 000000100 INF: ===================Camera #2 Frame #11===================
17-02-28 20:28:50.138 -08 000000105 INF: Y Motor: Unshifted Position: 5692415
17-02-28 20:28:50.179 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:28:50.179 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:28:50.179 -08 000000106 INF: ===================Camera #0 Frame #17===================
17-02-28 20:28:50.181 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:28:50.181 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:28:50.181 -08 000000100 INF: ===================Camera #2 Frame #17===================
17-02-28 20:28:50.188 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.312 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.347 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:28:50.347 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:28:50.347 -08 000000106 INF: ===================Camera #0 Frame #23===================
17-02-28 20:28:50.350 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:28:50.350 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:28:50.350 -08 000000100 INF: ===================Camera #2 Frame #23===================
17-02-28 20:28:50.452 -08 000000105 INF: Y Motor: Unshifted Position: 5490271
17-02-28 20:28:50.502 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.515 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:28:50.515 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:28:50.515 -08 000000106 INF: ===================Camera #0 Frame #29===================
17-02-28 20:28:50.519 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:28:50.519 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:28:50.519 -08 000000100 INF: ===================Camera #2 Frame #29===================
17-02-28 20:28:50.626 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.683 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 34, frameCount = 35.
17-02-28 20:28:50.683 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 35
17-02-28 20:28:50.683 -08 000000106 INF: ===================Camera #0 Frame #35===================
17-02-28 20:28:50.688 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:28:50.688 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:28:50.688 -08 000000100 INF: ===================Camera #2 Frame #36===================
17-02-28 20:28:50.762 -08 000000105 INF: Y Motor: Unshifted Position: 5286593
17-02-28 20:28:50.812 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:50.852 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:28:50.852 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:28:50.852 -08 000000106 INF: ===================Camera #0 Frame #42===================
17-02-28 20:28:50.861 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:28:50.861 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:28:50.861 -08 000000100 INF: ===================Camera #2 Frame #42===================
17-02-28 20:28:50.936 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.024 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:28:51.024 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:28:51.024 -08 000000106 INF: ===================Camera #0 Frame #48===================
17-02-28 20:28:51.030 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:28:51.030 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:28:51.030 -08 000000100 INF: ===================Camera #2 Frame #48===================
17-02-28 20:28:51.075 -08 000000105 INF: Y Motor: Unshifted Position: 5082922
17-02-28 20:28:51.125 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.193 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:28:51.193 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:28:51.193 -08 000000106 INF: ===================Camera #0 Frame #54===================
17-02-28 20:28:51.199 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:28:51.199 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:28:51.199 -08 000000100 INF: ===================Camera #2 Frame #54===================
17-02-28 20:28:51.251 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.363 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 59, frameCount = 60.
17-02-28 20:28:51.363 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 60
17-02-28 20:28:51.363 -08 000000106 INF: ===================Camera #0 Frame #60===================
17-02-28 20:28:51.369 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:28:51.369 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:28:51.369 -08 000000100 INF: ===================Camera #2 Frame #61===================
17-02-28 20:28:51.388 -08 000000105 INF: Y Motor: Unshifted Position: 4880778
17-02-28 20:28:51.438 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.533 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:28:51.533 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:28:51.533 -08 000000106 INF: ===================Camera #0 Frame #67===================
17-02-28 20:28:51.542 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:28:51.542 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:28:51.542 -08 000000100 INF: ===================Camera #2 Frame #67===================
17-02-28 20:28:51.562 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.698 -08 000000105 INF: Y Motor: Unshifted Position: 4677760
17-02-28 20:28:51.706 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:28:51.706 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:28:51.706 -08 000000106 INF: ===================Camera #0 Frame #73===================
17-02-28 20:28:51.712 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:28:51.712 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:28:51.712 -08 000000100 INF: ===================Camera #2 Frame #73===================
17-02-28 20:28:51.748 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.872 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:51.876 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:28:51.876 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:28:51.876 -08 000000106 INF: ===================Camera #0 Frame #79===================
17-02-28 20:28:51.882 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:28:51.882 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:28:51.882 -08 000000100 INF: ===================Camera #2 Frame #80===================
17-02-28 20:28:52.011 -08 000000105 INF: Y Motor: Unshifted Position: 4474306
17-02-28 20:28:52.045 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:28:52.045 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:28:52.045 -08 000000106 INF: ===================Camera #0 Frame #86===================
17-02-28 20:28:52.055 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:28:52.055 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:28:52.055 -08 000000100 INF: ===================Camera #2 Frame #86===================
17-02-28 20:28:52.061 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:52.185 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:52.217 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:28:52.217 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:28:52.217 -08 000000106 INF: ===================Camera #0 Frame #92===================
17-02-28 20:28:52.224 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:28:52.224 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:28:52.224 -08 000000100 INF: ===================Camera #2 Frame #92===================
17-02-28 20:28:52.323 -08 000000105 INF: Y Motor: Unshifted Position: 4272588
17-02-28 20:28:52.373 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:52.387 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:28:52.387 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:28:52.387 -08 000000106 INF: ===================Camera #0 Frame #98===================
17-02-28 20:28:52.394 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:28:52.394 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:28:52.394 -08 000000100 INF: ===================Camera #2 Frame #98===================
17-02-28 20:28:52.497 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:52.557 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:28:52.557 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:28:52.557 -08 000000106 INF: ===================Camera #0 Frame #104===================
17-02-28 20:28:52.564 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:28:52.564 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:28:52.564 -08 000000100 INF: ===================Camera #2 Frame #105===================
17-02-28 20:28:52.633 -08 000000105 INF: Y Motor: Unshifted Position: 4069782
17-02-28 20:28:52.683 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:52.727 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:28:52.727 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:28:52.727 -08 000000106 INF: ===================Camera #0 Frame #111===================
17-02-28 20:28:52.738 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:28:52.738 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:28:52.738 -08 000000100 INF: ===================Camera #2 Frame #111===================
17-02-28 20:28:52.808 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:52.900 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:28:52.900 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:28:52.900 -08 000000106 INF: ===================Camera #0 Frame #117===================
17-02-28 20:28:52.909 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:28:52.909 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:28:52.909 -08 000000100 INF: ===================Camera #2 Frame #117===================
17-02-28 20:28:52.949 -08 000000105 INF: Y Motor: Unshifted Position: 3865464
17-02-28 20:28:52.999 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.070 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:28:53.070 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:28:53.070 -08 000000106 INF: ===================Camera #0 Frame #123===================
17-02-28 20:28:53.079 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:28:53.079 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:28:53.079 -08 000000100 INF: ===================Camera #2 Frame #124===================
17-02-28 20:28:53.122 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.239 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:28:53.239 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:28:53.239 -08 000000106 INF: ===================Camera #0 Frame #130===================
17-02-28 20:28:53.252 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:28:53.252 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:28:53.252 -08 000000100 INF: ===================Camera #2 Frame #130===================
17-02-28 20:28:53.257 -08 000000105 INF: Y Motor: Unshifted Position: 3663961
17-02-28 20:28:53.307 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.410 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:28:53.410 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:28:53.410 -08 000000106 INF: ===================Camera #0 Frame #136===================
17-02-28 20:28:53.421 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:28:53.421 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:28:53.421 -08 000000100 INF: ===================Camera #2 Frame #136===================
17-02-28 20:28:53.433 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.569 -08 000000105 INF: Y Motor: Unshifted Position: 3460950
17-02-28 20:28:53.578 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:28:53.578 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:28:53.578 -08 000000106 INF: ===================Camera #0 Frame #142===================
17-02-28 20:28:53.590 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:28:53.590 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:28:53.590 -08 000000100 INF: ===================Camera #2 Frame #142===================
17-02-28 20:28:53.619 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.744 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.748 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:28:53.748 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:28:53.748 -08 000000106 INF: ===================Camera #0 Frame #148===================
17-02-28 20:28:53.761 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:28:53.761 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:28:53.761 -08 000000100 INF: ===================Camera #2 Frame #149===================
17-02-28 20:28:53.883 -08 000000105 INF: Y Motor: Unshifted Position: 3256855
17-02-28 20:28:53.918 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:28:53.918 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:28:53.918 -08 000000106 INF: ===================Camera #0 Frame #155===================
17-02-28 20:28:53.933 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:53.935 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:28:53.935 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:28:53.935 -08 000000100 INF: ===================Camera #2 Frame #155===================
17-02-28 20:28:54.057 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:54.091 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:28:54.091 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:28:54.091 -08 000000106 INF: ===================Camera #0 Frame #161===================
17-02-28 20:28:54.106 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:28:54.106 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:28:54.106 -08 000000100 INF: ===================Camera #2 Frame #161===================
17-02-28 20:28:54.195 -08 000000105 INF: Y Motor: Unshifted Position: 3055356
17-02-28 20:28:54.245 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:54.261 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:28:54.261 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:28:54.261 -08 000000106 INF: ===================Camera #0 Frame #167===================
17-02-28 20:28:54.277 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:28:54.277 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:28:54.277 -08 000000100 INF: ===================Camera #2 Frame #168===================
17-02-28 20:28:54.371 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:54.431 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:28:54.431 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:28:54.431 -08 000000106 INF: ===================Camera #0 Frame #173===================
17-02-28 20:28:54.451 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:28:54.451 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:28:54.451 -08 000000100 INF: ===================Camera #2 Frame #174===================
17-02-28 20:28:54.505 -08 000000105 INF: Y Motor: Unshifted Position: 2852346
17-02-28 20:28:54.555 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:54.601 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:28:54.601 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:28:54.601 -08 000000106 INF: ===================Camera #0 Frame #180===================
17-02-28 20:28:54.622 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:28:54.622 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:28:54.622 -08 000000100 INF: ===================Camera #2 Frame #180===================
17-02-28 20:28:54.680 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:54.774 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:28:54.774 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:28:54.774 -08 000000106 INF: ===================Camera #0 Frame #186===================
17-02-28 20:28:54.793 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:28:54.793 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:28:54.793 -08 000000100 INF: ===================Camera #2 Frame #187===================
17-02-28 20:28:54.819 -08 000000105 INF: Y Motor: Unshifted Position: 2648028
17-02-28 20:28:54.869 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:54.944 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:28:54.944 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:28:54.944 -08 000000106 INF: ===================Camera #0 Frame #192===================
17-02-28 20:28:54.967 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:28:54.967 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:28:54.967 -08 000000100 INF: ===================Camera #2 Frame #193===================
17-02-28 20:28:54.993 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.114 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:28:55.114 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:28:55.114 -08 000000106 INF: ===================Camera #0 Frame #199===================
17-02-28 20:28:55.129 -08 000000105 INF: Y Motor: Unshifted Position: 2446531
17-02-28 20:28:55.138 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:28:55.138 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:28:55.138 -08 000000100 INF: ===================Camera #2 Frame #199===================
17-02-28 20:28:55.179 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.287 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:28:55.287 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:28:55.287 -08 000000106 INF: ===================Camera #0 Frame #205===================
17-02-28 20:28:55.304 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.309 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:28:55.309 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:28:55.309 -08 000000100 INF: ===================Camera #2 Frame #206===================
17-02-28 20:28:55.441 -08 000000105 INF: Y Motor: Unshifted Position: 2242217
17-02-28 20:28:55.457 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:28:55.457 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:28:55.457 -08 000000106 INF: ===================Camera #0 Frame #211===================
17-02-28 20:28:55.483 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:28:55.483 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:28:55.483 -08 000000100 INF: ===================Camera #2 Frame #212===================
17-02-28 20:28:55.491 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.616 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.627 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:28:55.627 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:28:55.627 -08 000000106 INF: ===================Camera #0 Frame #217===================
17-02-28 20:28:55.654 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:28:55.654 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:28:55.654 -08 000000100 INF: ===================Camera #2 Frame #218===================
17-02-28 20:28:55.755 -08 000000105 INF: Y Motor: Unshifted Position: 2039413
17-02-28 20:28:55.797 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:28:55.797 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:28:55.797 -08 000000106 INF: ===================Camera #0 Frame #224===================
17-02-28 20:28:55.805 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.825 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:28:55.825 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:28:55.825 -08 000000100 INF: ===================Camera #2 Frame #225===================
17-02-28 20:28:55.929 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:55.970 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:28:55.970 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:28:55.970 -08 000000106 INF: ===================Camera #0 Frame #230===================
17-02-28 20:28:55.999 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:28:55.999 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:28:55.999 -08 000000100 INF: ===================Camera #2 Frame #231===================
17-02-28 20:28:56.066 -08 000000105 INF: Y Motor: Unshifted Position: 1837696
17-02-28 20:28:56.116 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:56.140 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:28:56.140 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:28:56.140 -08 000000106 INF: ===================Camera #0 Frame #236===================
17-02-28 20:28:56.170 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:28:56.170 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:28:56.170 -08 000000100 INF: ===================Camera #2 Frame #237===================
17-02-28 20:28:56.240 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:56.310 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:28:56.310 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:28:56.310 -08 000000106 INF: ===================Camera #0 Frame #243===================
17-02-28 20:28:56.341 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:28:56.341 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:28:56.341 -08 000000100 INF: ===================Camera #2 Frame #244===================
17-02-28 20:28:56.380 -08 000000105 INF: Y Motor: Unshifted Position: 1633589
17-02-28 20:28:56.430 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:56.484 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:28:56.484 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:28:56.484 -08 000000106 INF: ===================Camera #0 Frame #249===================
17-02-28 20:28:56.515 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:28:56.515 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:28:56.515 -08 000000100 INF: ===================Camera #2 Frame #250===================
17-02-28 20:28:56.553 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:56.654 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:28:56.654 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:28:56.654 -08 000000106 INF: ===================Camera #0 Frame #255===================
17-02-28 20:28:56.686 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:28:56.686 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:28:56.686 -08 000000100 INF: ===================Camera #2 Frame #256===================
17-02-28 20:28:56.692 -08 000000105 INF: Y Motor: Unshifted Position: 1430570
17-02-28 20:28:56.742 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:56.824 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:28:56.824 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:28:56.824 -08 000000106 INF: ===================Camera #0 Frame #261===================
17-02-28 20:28:56.857 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:28:56.857 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:28:56.857 -08 000000100 INF: ===================Camera #2 Frame #263===================
17-02-28 20:28:56.866 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:56.894 -08 000000037 INF: RunCopyService queue size at 2/28/2017 8:28:56 PM is 2
17-02-28 20:28:56.994 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:28:56.994 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:28:56.994 -08 000000106 INF: ===================Camera #0 Frame #268===================
17-02-28 20:28:57.002 -08 000000105 INF: Y Motor: Unshifted Position: 1229061
17-02-28 20:28:57.031 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:28:57.031 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:28:57.031 -08 000000100 INF: ===================Camera #2 Frame #269===================
17-02-28 20:28:57.052 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:57.125 -08 000000028 INF: FPGA: Recv TDIYWAIT
17-02-28 20:28:57.125 -08 000000061 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:57.127 -08 000000061 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:28:57.127 -08 000000051 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:28:57.128 -08 000000034 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:28:57.128 -08 000000051 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:28:57.128 -08 000000051 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:28:57.128 -08 000000051 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:28:57.128 -08 000000034 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:28:57.128 -08 000000034 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:28:57.128 -08 000000034 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:28:57.128 -08 000000051 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:28:57.129 -08 000000034 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:28:57.167 -08 000000106 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:57.167 -08 000000106 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:57.167 -08 000000106 INF: ===================Camera #0 Frame #272===================
17-02-28 20:28:57.177 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:57.180 -08 000000106 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:57.181 -08 000000106 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:57.317 -08 000000105 INF: Y Motor: Unshifted Position: 1024752
17-02-28 20:28:57.344 -08 000000106 INF: Camera #0 ReleaseBuffer
17-02-28 20:28:57.344 -08 000000100 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:28:57.344 -08 000000100 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:28:57.344 -08 000000100 INF: ===================Camera #2 Frame #272===================
17-02-28 20:28:57.344 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:28:57.354 -08 000000100 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:28:57.355 -08 000000100 INF: ===================CameraTDI Cleanup===================
17-02-28 20:28:57.367 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:57.379 -08 000000106 INF: ======================================
17-02-28 20:28:57.501 -08 000000050 INF: FPGA: Recv EX2MV
17-02-28 20:28:57.501 -08 000000050 INF: FPGA: Recv EX1MV
17-02-28 20:28:57.501 -08 000000051 INF: Excitation Filter 2: Moved 107 steps in 373.0825 ms
17-02-28 20:28:57.501 -08 000000051 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.2209 ms
17-02-28 20:28:57.501 -08 000000034 INF: Excitation Filter 1: Moved 107 steps in 373.0004 ms
17-02-28 20:28:57.501 -08 000000034 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.2384 ms
17-02-28 20:28:57.501 -08 000000034 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.3121 ms
17-02-28 20:28:57.501 -08 000000051 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2954 ms
17-02-28 20:28:57.501 -08 000000034 INF: ======================================
17-02-28 20:28:57.502 -08 000000051 INF: ======================================
17-02-28 20:28:57.503 -08 000000061 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:28:57.504 -08 000000105 INF: Y Motor: Unshifted Position: 993097
17-02-28 20:28:57.504 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:28:57.504 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:57.504 -08 000000061 INF: ======================================
17-02-28 20:28:57.555 -08 000000100 INF: Camera #2 ReleaseBuffer
17-02-28 20:28:57.555 -08 000000100 INF: ===================Camera TDI===================
17-02-28 20:28:57.565 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:57.565 -08 000000105 INF: Y Motor: Moved to 14.9310 after 7861 ms
17-02-28 20:28:57.565 -08 000000105 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:28:57.589 -08 000000100 INF: ======================================
17-02-28 20:28:57.590 -08 000000038 INF: ===================Camera TDI===================
17-02-28 20:28:57.591 -08 000000038 INF: ======================================
17-02-28 20:28:57.627 -08 000000105 INF: Y Motor: Recv v 4097\r
17-02-28 20:28:57.627 -08 000000105 INF: Y Motor: Status After move finished OK:
17-02-28 20:28:57.627 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:57.689 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:57.689 -08 000000105 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:57.689 -08 000000105 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:28:57.751 -08 000000105 INF: Y Motor: Recv v 134217728\r
17-02-28 20:28:57.751 -08 000000105 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:28:57.751 -08 000000105 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:28:57.751 -08 000000105 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:28:57.813 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:28:57.813 -08 000000105 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:28:57.813 -08 000000105 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:28:57.813 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:57.878 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:57.878 -08 000000105 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:28:57.878 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:57.940 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:28:57.940 -08 000000105 INF: ======================================
17-02-28 20:28:57.941 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:57.942 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:28:57.943 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:57.943 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:28:58.000 -08 000000056 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:28:58.000 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:28:58.062 -08 000000083 INF: FPGA: Recv TDIYERD 1493098
17-02-28 20:28:58.062 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:28:58.124 -08 000000050 INF: FPGA: Recv ZADCR 21411
17-02-28 20:28:58.124 -08 000000042 INF: At scan end Y pos = 14.931 and Z pos = -0.082. Y moved -48.539 mm
17-02-28 20:28:58.124 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:28:58.187 -08 000000080 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:28:58.187 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:28:58.187 -08 000000042 INF: TDIScan finished after 11901.1849 ms
17-02-28 20:28:58.187 -08 000000042 INF: Image[0]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:28:58.187 -08 000000042 INF: Image[2]: Y should trigger at 63.470 mm, 2nd row was at 64.379 mm (error = 0.909 mm)
17-02-28 20:28:58.189 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.222 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.452 um
17-02-28 20:28:58.222 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.223 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:28:58.248 -08 000000082 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:28:58.249 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.249 -08 000000100 INF: ===================Dither Clean Up Command===================
17-02-28 20:28:58.250 -08 000000083 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:28:58.250 -08 000000060 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:28:58.250 -08 000000029 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:28:58.250 -08 000000060 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:28:58.250 -08 000000083 INF: ======================================
17-02-28 20:28:58.250 -08 000000060 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:28:58.250 -08 000000029 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:28:58.250 -08 000000029 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:28:58.250 -08 000000061 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:58.250 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:58.251 -08 000000061 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:28:58.254 -08 000000033 INF: ===================LFT:Extracting coords===================
17-02-28 20:28:58.279 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:58.280 -08 000000033 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:28:58.280 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.281 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.281 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.281 -08 000000080 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.281 -08 000000028 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:58.281 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:58.281 -08 000000062 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:58.281 -08 000000080 INF: ===================Lookup Focus Tracking===================
17-02-28 20:28:58.314 -08 000000105 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:58.314 -08 000000105 INF: FPGA: Recv ZSEL 
17-02-28 20:28:58.314 -08 000000061 INF: FPGA: Xmit ZDACW 26370\n
17-02-28 20:28:58.314 -08 000000060 INF: ======================================
17-02-28 20:28:58.316 -08 000000029 INF: Y Motor: Recv ok\r
17-02-28 20:28:58.316 -08 000000029 INF: ======================================
17-02-28 20:28:58.355 -08 000000028 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:58.355 -08 000000098 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:58.355 -08 000000062 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:58.355 -08 000000080 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:28:58.373 -08 000000039 INF: FPGA: Recv ZDACW 
17-02-28 20:28:58.374 -08 000000061 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:28:58.374 -08 000000061 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:28:58.436 -08 000000068 INF: FPGA: Recv TDIBB
17-02-28 20:28:58.436 -08 000000061 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:28:58.437 -08 000000061 INF: ======================================
17-02-28 20:28:58.506 -08 000000028 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:28:58.506 -08 000000028 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0805951988643565 in the next cycle, cycle 4 FC:B, C:3,L:5,B
17-02-28 20:28:58.506 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.507 -08 000000028 INF: ======================================
17-02-28 20:28:58.507 -08 000000098 INF: LFT found best fwhm score 2.000201 in 152 ms
17-02-28 20:28:58.507 -08 000000062 INF: LFT found best fwhm score 2.000517 in 152 ms
17-02-28 20:28:58.507 -08 000000098 INF: LFT found good score at index 517 with fwhm value 2.000201. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:5,B
17-02-28 20:28:58.507 -08 000000062 INF: LFT found good score at index 201 with fwhm value 2.000517. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:5,B
17-02-28 20:28:58.507 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.507 -08 000000062 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.507 -08 000000098 INF: ======================================
17-02-28 20:28:58.507 -08 000000062 INF: ======================================
17-02-28 20:28:58.508 -08 000000080 INF: LFT found best fwhm score 2.000118 in 152 ms
17-02-28 20:28:58.508 -08 000000080 INF: LFT found good score at index 5525 with fwhm value 2.000118. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:5,B
17-02-28 20:28:58.508 -08 000000080 INF: ===================LookupFocusTracking===================
17-02-28 20:28:58.508 -08 000000080 INF: ======================================
17-02-28 20:28:58.509 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:28:58.510 -08 000000033 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:5,B
17-02-28 20:28:58.511 -08 000000033 INF: ======================================
17-02-28 20:28:58.512 -08 000000100 INF: ======================================
17-02-28 20:28:58.512 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.513 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:28:58.514 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:28:58.515 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:28:58.515 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:28:58.516 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:28:58.516 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:28:58.516 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 1 - X = 79.68818 Y = 39.78827===================
17-02-28 20:28:58.538 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:28:58.538 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:28:58.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:28:58.539 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:58.539 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:28:58.539 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:28:58.539 -08 000000042 INF: Transformed XStagePosition from 80.79618 mm to 80.7730657253414 mm.
17-02-28 20:28:58.585 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":5,"Tile":2103,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF219","HCSMMF189","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.722 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5782778015137 mm.
17-02-28 20:28:58.723 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3782778015137 mm.
17-02-28 20:28:58.723 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4690278015137 mm.
17-02-28 20:28:58.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:28:58.725 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:28:58.726 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -100.6 um, section = E_1
17-02-28 20:28:58.727 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:58.728 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:28:58.728 -08 000000036 INF: ===================Move X,Y===================
17-02-28 20:28:58.728 -08 000000108 INF: ===================MoveEmissionFilters===================
17-02-28 20:28:58.729 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:58.729 -08 000000036 INF: ===================Move X,Y, Parallel===================
17-02-28 20:28:58.729 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:58.730 -08 000000080 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:58.730 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:28:58.730 -08 000000105 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:28:58.730 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:58.730 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:58.730 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:58.730 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:58.730 -08 000000080 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:58.731 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:28:58.731 -08 000000038 INF: ===================Move Y Motor without settling===================
17-02-28 20:28:58.731 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:28:58.731 -08 000000038 INF: Y Motor: Moving to 64.5783 mm @25.000 mm/sec, started at 14.9310 mm
17-02-28 20:28:58.731 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:28:58.731 -08 000000073 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:28:58.731 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:28:58.731 -08 000000038 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:28:58.732 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:28:58.732 -08 000000073 INF: ======================================
17-02-28 20:28:58.732 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:28:58.733 -08 000000086 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:28:58.734 -08 000000086 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:28:58.734 -08 000000030 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:28:58.734 -08 000000073 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:28:58.734 -08 000000086 INF: ======================================
17-02-28 20:28:58.734 -08 000000073 INF: ======================================
17-02-28 20:28:58.735 -08 000000030 INF: ======================================
17-02-28 20:28:58.735 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:28:58.736 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:28:58.736 -08 000000030 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:28:58.737 -08 000000033 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:28:58.737 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:58.737 -08 000000068 INF: ======================================
17-02-28 20:28:58.737 -08 000000030 INF: ======================================
17-02-28 20:28:58.737 -08 000000073 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:28:58.737 -08 000000076 INF: ===================Camera Arm TDI===================
17-02-28 20:28:58.737 -08 000000033 INF: ======================================
17-02-28 20:28:58.738 -08 000000058 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:28:58.738 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:58.738 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:58.738 -08 000000073 INF: ======================================
17-02-28 20:28:58.738 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:58.738 -08 000000058 INF: ======================================
17-02-28 20:28:58.738 -08 000000086 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:28:58.739 -08 000000076 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:58.739 -08 000000032 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:28:58.740 -08 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:28:58.740 -08 000000080 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:28:58.740 -08 000000032 INF: ======================================
17-02-28 20:28:58.741 -08 000000034 INF: ======================================
17-02-28 20:28:58.741 -08 000000080 INF: ======================================
17-02-28 20:28:58.742 -08 000000108 INF: ======================================
17-02-28 20:28:58.743 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":5,"Tile":2106,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF278","HCSMMF238","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.744 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":5,"Tile":2110,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF249","HCSMMF270","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.745 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":5,"Tile":2104,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF212","HCSMMF276","HCSMMF266"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.745 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":5,"Tile":2105,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF282","HCSMMF209","HCSMMF227"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.747 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":5,"Tile":2112,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF248","HCSMMF279","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.747 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":5,"Tile":2111,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF233","HCSMMF247","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.748 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":5,"Tile":2108,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF253","HCSMMF271","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.749 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":5,"Tile":2113,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF192","HCSMMF262","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.749 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":5,"Tile":2117,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF273","HCSMMF240","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.750 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":5,"Tile":2101,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF218","HCSMMF265","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.751 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":5,"Tile":2120,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF228","HCSMMF194","HCSMMF215"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.751 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":5,"Tile":2116,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF226","HCSMMF230","HCSMMF272"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.752 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":5,"Tile":2107,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF239","HCSMMF185","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.753 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":5,"Tile":2109,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF229","HCSMMF242","HCSMMF198"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.754 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":5,"Tile":2102,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF214","HCSMMF246","HCSMMF280"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.755 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":5,"Tile":2118,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF196","HCSMMF231","HCSMMF183"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.755 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":5,"Tile":2122,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF178","HCSMMF225","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.757 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":5,"Tile":2114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF208","HCSMMF260","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.758 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":5,"Tile":2115,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF197","HCSMMF205","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.761 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":5,"Tile":2123,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF199","HCSMMF187","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.762 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":5,"Tile":2125,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF263","HCSMMF255","HCSMMF234"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.762 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":5,"Tile":2124,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF277","HCSMMF220","HCSMMF281"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.763 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":5,"Tile":2121,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF269","HCSMMF257","HCSMMF186","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.765 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":5,"Tile":2128,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF241","HCSMMF250","HCSMMF210"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.766 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":5,"Tile":2126,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF213","HCSMMF285","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.767 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":5,"Tile":2119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF254","HCSMMF224","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.768 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":5,"Tile":2127,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF258","HCSMMF223","HCSMMF286","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:28:58.770 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:58.776 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:28:58.812 -08 000000070 INF: FPGA: Recv ZSEL 
17-02-28 20:28:58.813 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:58.813 -08 000000086 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:28:58.814 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:28:58.814 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:28:58.814 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:28:58.814 -08 000000038 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:28:58.814 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:28:58.866 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:58.866 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:28:58.874 -08 000000091 INF: FPGA: Recv TDIBB
17-02-28 20:28:58.874 -08 000000086 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:28:58.875 -08 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:28:58.876 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:28:58.876 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:28:58.876 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:58.876 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:28:58.876 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:28:58.876 -08 000000074 INF: X Motor: Moving to 80.7731 mm @15.000 mm/sec, started at 79.6738 mm
17-02-28 20:28:58.876 -08 000000074 INF: X Motor: Xmit MA 8918\n
17-02-28 20:28:58.877 -08 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:28:58.877 -08 000000086 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:28:58.878 -08 000000086 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:28:58.902 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:58.908 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:28:58.936 -08 000000089 INF: FPGA: Recv ZSTEP 
17-02-28 20:28:58.936 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:58.938 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:28:58.938 -08 000000038 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:28:58.938 -08 000000074 INF: X Motor: Recv MA 8918\r\n>
17-02-28 20:28:58.938 -08 000000038 INF: Y Motor: Set target position to 5957828 encoder counts
17-02-28 20:28:58.938 -08 000000038 INF: Y Motor: Xmit s r0xca 5957828\r
17-02-28 20:28:58.938 -08 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:28:58.938 -08 000000074 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:28:58.938 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:58.940 -08 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:28:58.940 -08 000000086 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:28:58.940 -08 000000086 INF: Z Motor: Arming to move to -0.0606 mm
17-02-28 20:28:58.940 -08 000000086 INF: FPGA: Xmit ZYT 6437828 4\n
17-02-28 20:28:58.997 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:58.998 -08 000000084 INF: FPGA: Recv ZYT 
17-02-28 20:28:58.998 -08 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1493097 enc / 14.931 mm / ) = 6437828 enc / 64.378 mm
17-02-28 20:28:58.998 -08 000000086 INF: FPGA: Xmit ZARM 15884\n
17-02-28 20:28:59.000 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:28:59.000 -08 000000038 INF: Y Motor: Start the move command
17-02-28 20:28:59.000 -08 000000038 INF: Y Motor: Xmit t 1\r
17-02-28 20:28:59.003 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:28:59.060 -08 000000033 INF: FPGA: Recv ZARM
17-02-28 20:28:59.060 -08 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9888 ms
17-02-28 20:28:59.060 -08 000000086 INF: Z Motor: ArmAbsStepped took 119.8303 ms
17-02-28 20:28:59.060 -08 000000086 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:28:59.062 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:28:59.062 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:28:59.062 -08 000000038 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:28:59.062 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:59.063 -08 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:28:59.064 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:28:59.065 -08 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:28:59.066 -08 000000086 INF: ===================TDI Scan Setup===================
17-02-28 20:28:59.067 -08 000000086 INF: ======================================
17-02-28 20:28:59.186 -08 000000038 INF: Y Motor: Unshifted Position: 1074526
17-02-28 20:28:59.186 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:59.192 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:28:59.236 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:59.278 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:28:59.339 -08 000000076 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:59.339 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:59.339 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:59.354 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:59.356 -08 000000076 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:28:59.363 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:59.498 -08 000000038 INF: Y Motor: Unshifted Position: 1784748
17-02-28 20:28:59.548 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:59.558 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:28:59.560 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:28:59.625 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:28:59.625 -08 000000074 INF: X Motor: Moved to 80.7725 after 687 ms
17-02-28 20:28:59.625 -08 000000074 INF: ======================================
17-02-28 20:28:59.675 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:59.811 -08 000000038 INF: Y Motor: Unshifted Position: 2568117
17-02-28 20:28:59.861 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:28:59.962 -08 000000076 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:28:59.962 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:28:59.962 -08 000000076 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:28:59.977 -08 000000076 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:28:59.979 -08 000000076 INF: ===================Camera Arm TDI===================
17-02-28 20:28:59.980 -08 000000076 INF: ======================================
17-02-28 20:28:59.981 -08 000000105 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:28:59.983 -08 000000105 INF: ======================================
17-02-28 20:28:59.987 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:00.123 -08 000000038 INF: Y Motor: Unshifted Position: 3345558
17-02-28 20:29:00.173 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:00.297 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:00.437 -08 000000038 INF: Y Motor: Unshifted Position: 4126466
17-02-28 20:29:00.487 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:00.611 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:00.747 -08 000000038 INF: Y Motor: Unshifted Position: 4908915
17-02-28 20:29:00.797 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:00.921 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:01.060 -08 000000038 INF: Y Motor: Unshifted Position: 5685632
17-02-28 20:29:01.110 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:01.234 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:01.370 -08 000000038 INF: Y Motor: Unshifted Position: 5957830
17-02-28 20:29:01.370 -08 000000038 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:01.370 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:01.432 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:29:01.432 -08 000000038 INF: Y Motor: Moved to 64.5783 after 2370 ms
17-02-28 20:29:01.432 -08 000000038 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:01.497 -08 000000038 INF: Y Motor: Recv v 4096\r
17-02-28 20:29:01.497 -08 000000038 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:01.497 -08 000000038 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:01.559 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:29:01.559 -08 000000038 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:01.559 -08 000000038 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:01.621 -08 000000038 INF: Y Motor: Recv v 402653184\r
17-02-28 20:29:01.621 -08 000000038 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:29:01.621 -08 000000038 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:01.621 -08 000000038 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:01.683 -08 000000038 INF: Y Motor: Recv v 0\r
17-02-28 20:29:01.683 -08 000000038 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:01.683 -08 000000038 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:01.683 -08 000000038 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:01.745 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:29:01.745 -08 000000038 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:01.745 -08 000000038 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:01.807 -08 000000038 INF: Y Motor: Recv ok\r
17-02-28 20:29:01.807 -08 000000038 INF: ======================================
17-02-28 20:29:01.808 -08 000000036 INF: ===================Move X,Y===================
17-02-28 20:29:01.809 -08 000000036 INF: ======================================
17-02-28 20:29:01.810 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:01.811 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:01.811 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:29:01.811 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:29:01.869 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:01.869 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:29:01.932 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:29:01.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:29:01.933 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:01.933 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:01.994 -08 000000087 INF: FPGA: Recv TDIYERD 6457828
17-02-28 20:29:01.994 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457828 counts (64.578 mm)
17-02-28 20:29:01.994 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:01.995 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:01.996 -08 000000088 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:01.996 -08 000000078 INF: ===================Set YMotor gains for scans===================
17-02-28 20:29:01.996 -08 000000078 INF: ======================================
17-02-28 20:29:01.996 -08 000000088 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:01.997 -08 000000088 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:29:01.997 -08 000000088 INF: FPGA: Xmit TDIYPOS 6346903\n
17-02-28 20:29:02.057 -08 000000038 INF: FPGA: Recv TDIYPOS
17-02-28 20:29:02.058 -08 000000088 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:02.059 -08 000000088 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:29:02.059 -08 000000088 INF: FPGA: Xmit TDIYARM3 139264 6437828 1 1\n
17-02-28 20:29:02.122 -08 000000099 INF: FPGA: Recv TDIYARM3
17-02-28 20:29:02.122 -08 000000088 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:02.123 -08 000000088 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:02.124 -08 000000088 INF: ======================================
17-02-28 20:29:02.125 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:02.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:02.126 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:02.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:02.127 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:02.128 -08 000000050 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:29:02.128 -08 000000098 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:29:02.128 -08 000000050 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:29:02.128 -08 000000050 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:29:02.128 -08 000000050 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:29:02.128 -08 000000098 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:29:02.128 -08 000000050 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:29:02.129 -08 000000098 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:29:02.129 -08 000000098 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:29:02.131 -08 000000098 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:29:02.491 -08 000000062 INF: FPGA: Recv EX2MV
17-02-28 20:29:02.491 -08 000000062 INF: FPGA: Recv EX1MV
17-02-28 20:29:02.491 -08 000000098 INF: Excitation Filter 1: Moved -107 steps in 362.477 ms
17-02-28 20:29:02.491 -08 000000098 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 362.6298 ms
17-02-28 20:29:02.491 -08 000000098 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 362.7188 ms
17-02-28 20:29:02.491 -08 000000050 INF: Excitation Filter 2: Moved -107 steps in 362.6207 ms
17-02-28 20:29:02.491 -08 000000050 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.0325 ms
17-02-28 20:29:02.491 -08 000000050 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 363.1073 ms
17-02-28 20:29:02.492 -08 000000098 INF: ======================================
17-02-28 20:29:02.492 -08 000000050 INF: ======================================
17-02-28 20:29:02.493 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:02.494 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:02.495 -08 000000080 INF: ===================Camera TDI===================
17-02-28 20:29:02.495 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:02.495 -08 000000077 INF: Y Motor: Moving to 14.9299 mm @6.500 mm/sec, started at 64.5783 mm
17-02-28 20:29:02.495 -08 000000078 INF: ===================FPGA Z Wait===================
17-02-28 20:29:02.495 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:02.495 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:02.495 -08 000000078 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:29:02.496 -08 000000080 INF: ===================Camera TDI, Parallel===================
17-02-28 20:29:02.496 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:02.496 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:29:02.496 -08 000000108 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:29:02.496 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:29:02.499 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:02.499 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:02.499 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:02.499 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:02.502 -08 000000108 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:29:02.557 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:02.557 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:02.557 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:02.619 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:02.619 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:02.649 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:02.649 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:02.649 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:02.649 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:02.681 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:02.681 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:02.681 -08 000000077 INF: Y Motor: Set target position to 992994 encoder counts
17-02-28 20:29:02.681 -08 000000077 INF: Y Motor: Xmit s r0xca 992994\r
17-02-28 20:29:02.743 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:02.743 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:29:02.743 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:02.799 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:02.799 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:02.799 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:02.799 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:02.805 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:02.805 -08 000000077 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:29:02.805 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:02.868 -08 000000038 INF: FPGA: Recv ZWAIT 
17-02-28 20:29:02.868 -08 000000078 INF: ======================================
17-02-28 20:29:02.932 -08 000000077 INF: Y Motor: Unshifted Position: 5893807
17-02-28 20:29:02.949 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:02.949 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:02.949 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:02.949 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:02.949 -08 000000083 INF: ===================Camera #2 Frame #5===================
17-02-28 20:29:02.949 -08 000000034 INF: ===================Camera #0 Frame #5===================
17-02-28 20:29:02.982 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:03.106 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:03.115 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:03.115 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:03.115 -08 000000083 INF: ===================Camera #2 Frame #11===================
17-02-28 20:29:03.121 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:03.121 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:03.121 -08 000000034 INF: ===================Camera #0 Frame #11===================
17-02-28 20:29:03.242 -08 000000077 INF: Y Motor: Unshifted Position: 5692313
17-02-28 20:29:03.292 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:03.293 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:29:03.293 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:29:03.293 -08 000000083 INF: ===================Camera #2 Frame #17===================
17-02-28 20:29:03.297 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:29:03.297 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:29:03.297 -08 000000034 INF: ===================Camera #0 Frame #17===================
17-02-28 20:29:03.419 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:03.471 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:29:03.471 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:29:03.471 -08 000000083 INF: ===================Camera #2 Frame #24===================
17-02-28 20:29:03.473 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:29:03.473 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:29:03.473 -08 000000034 INF: ===================Camera #0 Frame #24===================
17-02-28 20:29:03.556 -08 000000077 INF: Y Motor: Unshifted Position: 5488868
17-02-28 20:29:03.606 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:03.650 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:29:03.650 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:29:03.650 -08 000000083 INF: ===================Camera #2 Frame #30===================
17-02-28 20:29:03.654 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:29:03.654 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:29:03.654 -08 000000034 INF: ===================Camera #0 Frame #31===================
17-02-28 20:29:03.730 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:03.825 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:29:03.825 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:29:03.825 -08 000000083 INF: ===================Camera #2 Frame #37===================
17-02-28 20:29:03.835 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:29:03.835 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:29:03.835 -08 000000034 INF: ===================Camera #0 Frame #37===================
17-02-28 20:29:03.867 -08 000000077 INF: Y Motor: Unshifted Position: 5286496
17-02-28 20:29:03.917 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.008 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:29:04.008 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:29:04.008 -08 000000083 INF: ===================Camera #2 Frame #44===================
17-02-28 20:29:04.013 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:29:04.013 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:29:04.013 -08 000000034 INF: ===================Camera #0 Frame #44===================
17-02-28 20:29:04.043 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.179 -08 000000077 INF: Y Motor: Unshifted Position: 5083040
17-02-28 20:29:04.181 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:29:04.181 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:29:04.181 -08 000000083 INF: ===================Camera #2 Frame #50===================
17-02-28 20:29:04.194 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:29:04.194 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:29:04.194 -08 000000034 INF: ===================Camera #0 Frame #50===================
17-02-28 20:29:04.229 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.350 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:29:04.350 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:29:04.350 -08 000000083 INF: ===================Camera #2 Frame #56===================
17-02-28 20:29:04.353 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.372 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:29:04.372 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:29:04.372 -08 000000034 INF: ===================Camera #0 Frame #57===================
17-02-28 20:29:04.492 -08 000000077 INF: Y Motor: Unshifted Position: 4881324
17-02-28 20:29:04.525 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:29:04.525 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:29:04.525 -08 000000083 INF: ===================Camera #2 Frame #63===================
17-02-28 20:29:04.542 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.547 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:29:04.547 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:29:04.547 -08 000000034 INF: ===================Camera #0 Frame #63===================
17-02-28 20:29:04.665 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.705 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:29:04.705 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:29:04.705 -08 000000083 INF: ===================Camera #2 Frame #69===================
17-02-28 20:29:04.723 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:29:04.723 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:29:04.723 -08 000000034 INF: ===================Camera #0 Frame #70===================
17-02-28 20:29:04.804 -08 000000077 INF: Y Motor: Unshifted Position: 4678527
17-02-28 20:29:04.854 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:04.880 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:29:04.880 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:29:04.880 -08 000000083 INF: ===================Camera #2 Frame #76===================
17-02-28 20:29:04.899 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:29:04.899 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:29:04.899 -08 000000034 INF: ===================Camera #0 Frame #76===================
17-02-28 20:29:04.978 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.054 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:29:05.054 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:29:05.054 -08 000000083 INF: ===================Camera #2 Frame #82===================
17-02-28 20:29:05.075 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:29:05.075 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:29:05.075 -08 000000034 INF: ===================Camera #0 Frame #83===================
17-02-28 20:29:05.114 -08 000000077 INF: Y Motor: Unshifted Position: 4475061
17-02-28 20:29:05.164 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.224 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:29:05.224 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:29:05.224 -08 000000083 INF: ===================Camera #2 Frame #88===================
17-02-28 20:29:05.246 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:29:05.246 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:29:05.246 -08 000000034 INF: ===================Camera #0 Frame #89===================
17-02-28 20:29:05.291 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.393 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:29:05.393 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:29:05.393 -08 000000083 INF: ===================Camera #2 Frame #95===================
17-02-28 20:29:05.414 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:29:05.414 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:29:05.414 -08 000000034 INF: ===================Camera #0 Frame #95===================
17-02-28 20:29:05.427 -08 000000077 INF: Y Motor: Unshifted Position: 4271397
17-02-28 20:29:05.477 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.565 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:29:05.565 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:29:05.565 -08 000000083 INF: ===================Camera #2 Frame #101===================
17-02-28 20:29:05.582 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:29:05.582 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:29:05.582 -08 000000034 INF: ===================Camera #0 Frame #102===================
17-02-28 20:29:05.601 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.734 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:29:05.734 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:29:05.734 -08 000000083 INF: ===================Camera #2 Frame #107===================
17-02-28 20:29:05.740 -08 000000077 INF: Y Motor: Unshifted Position: 4069891
17-02-28 20:29:05.754 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:29:05.754 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:29:05.754 -08 000000034 INF: ===================Camera #0 Frame #108===================
17-02-28 20:29:05.790 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.903 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:29:05.903 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:29:05.903 -08 000000083 INF: ===================Camera #2 Frame #113===================
17-02-28 20:29:05.914 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:05.923 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:29:05.923 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:29:05.923 -08 000000034 INF: ===================Camera #0 Frame #114===================
17-02-28 20:29:06.052 -08 000000077 INF: Y Motor: Unshifted Position: 3866231
17-02-28 20:29:06.072 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:29:06.072 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:29:06.072 -08 000000083 INF: ===================Camera #2 Frame #120===================
17-02-28 20:29:06.091 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:29:06.091 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:29:06.091 -08 000000034 INF: ===================Camera #0 Frame #120===================
17-02-28 20:29:06.102 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:06.227 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:06.245 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:29:06.245 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:29:06.245 -08 000000083 INF: ===================Camera #2 Frame #126===================
17-02-28 20:29:06.260 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:29:06.260 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:29:06.260 -08 000000034 INF: ===================Camera #0 Frame #126===================
17-02-28 20:29:06.365 -08 000000077 INF: Y Motor: Unshifted Position: 3662560
17-02-28 20:29:06.415 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:06.415 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:29:06.415 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:29:06.415 -08 000000083 INF: ===================Camera #2 Frame #132===================
17-02-28 20:29:06.430 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:29:06.430 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:29:06.430 -08 000000034 INF: ===================Camera #0 Frame #133===================
17-02-28 20:29:06.538 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:06.584 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:29:06.584 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:29:06.584 -08 000000083 INF: ===================Camera #2 Frame #138===================
17-02-28 20:29:06.602 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 138, frameCount = 139.
17-02-28 20:29:06.602 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 139
17-02-28 20:29:06.602 -08 000000034 INF: ===================Camera #0 Frame #139===================
17-02-28 20:29:06.675 -08 000000077 INF: Y Motor: Unshifted Position: 3459114
17-02-28 20:29:06.725 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:06.753 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:29:06.753 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:29:06.753 -08 000000083 INF: ===================Camera #2 Frame #145===================
17-02-28 20:29:06.770 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:29:06.770 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:29:06.770 -08 000000034 INF: ===================Camera #0 Frame #145===================
17-02-28 20:29:06.853 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:06.925 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:29:06.925 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:29:06.925 -08 000000083 INF: ===================Camera #2 Frame #151===================
17-02-28 20:29:06.938 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:29:06.938 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:29:06.938 -08 000000034 INF: ===================Camera #0 Frame #151===================
17-02-28 20:29:06.988 -08 000000077 INF: Y Motor: Unshifted Position: 3256750
17-02-28 20:29:07.038 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:07.094 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:29:07.094 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:29:07.094 -08 000000083 INF: ===================Camera #2 Frame #157===================
17-02-28 20:29:07.106 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 157, frameCount = 158.
17-02-28 20:29:07.106 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 158
17-02-28 20:29:07.106 -08 000000034 INF: ===================Camera #0 Frame #158===================
17-02-28 20:29:07.162 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:07.286 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:29:07.286 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 163, frameCount = 164.
17-02-28 20:29:07.286 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:29:07.286 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 164
17-02-28 20:29:07.287 -08 000000034 INF: ===================Camera #0 Frame #164===================
17-02-28 20:29:07.287 -08 000000083 INF: ===================Camera #2 Frame #164===================
17-02-28 20:29:07.299 -08 000000077 INF: Y Motor: Unshifted Position: 3055257
17-02-28 20:29:07.349 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:07.455 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:29:07.455 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:29:07.455 -08 000000034 INF: ===================Camera #0 Frame #170===================
17-02-28 20:29:07.459 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:29:07.459 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:29:07.459 -08 000000083 INF: ===================Camera #2 Frame #171===================
17-02-28 20:29:07.473 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:07.613 -08 000000077 INF: Y Motor: Unshifted Position: 2850941
17-02-28 20:29:07.623 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:29:07.623 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:29:07.623 -08 000000034 INF: ===================Camera #0 Frame #177===================
17-02-28 20:29:07.631 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:29:07.631 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:29:07.631 -08 000000083 INF: ===================Camera #2 Frame #177===================
17-02-28 20:29:07.663 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:07.787 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:07.794 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:29:07.794 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:29:07.794 -08 000000034 INF: ===================Camera #0 Frame #183===================
17-02-28 20:29:07.800 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 182, frameCount = 183.
17-02-28 20:29:07.800 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 183
17-02-28 20:29:07.800 -08 000000083 INF: ===================Camera #2 Frame #183===================
17-02-28 20:29:07.923 -08 000000077 INF: Y Motor: Unshifted Position: 2648791
17-02-28 20:29:07.962 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:29:07.962 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:29:07.962 -08 000000034 INF: ===================Camera #0 Frame #189===================
17-02-28 20:29:07.969 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 188, frameCount = 189.
17-02-28 20:29:07.969 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 189
17-02-28 20:29:07.969 -08 000000083 INF: ===================Camera #2 Frame #189===================
17-02-28 20:29:07.973 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.097 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.130 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:29:08.130 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:29:08.130 -08 000000034 INF: ===================Camera #0 Frame #195===================
17-02-28 20:29:08.138 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:29:08.138 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:29:08.138 -08 000000083 INF: ===================Camera #2 Frame #196===================
17-02-28 20:29:08.236 -08 000000077 INF: Y Motor: Unshifted Position: 2445131
17-02-28 20:29:08.286 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.298 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:29:08.298 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:29:08.298 -08 000000034 INF: ===================Camera #0 Frame #201===================
17-02-28 20:29:08.310 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:29:08.310 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:29:08.310 -08 000000083 INF: ===================Camera #2 Frame #202===================
17-02-28 20:29:08.410 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.466 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:29:08.466 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:29:08.466 -08 000000034 INF: ===================Camera #0 Frame #208===================
17-02-28 20:29:08.479 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 207, frameCount = 208.
17-02-28 20:29:08.479 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 208
17-02-28 20:29:08.479 -08 000000083 INF: ===================Camera #2 Frame #208===================
17-02-28 20:29:08.549 -08 000000077 INF: Y Motor: Unshifted Position: 2243628
17-02-28 20:29:08.599 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.637 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:29:08.637 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:29:08.637 -08 000000034 INF: ===================Camera #0 Frame #214===================
17-02-28 20:29:08.648 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 213, frameCount = 214.
17-02-28 20:29:08.648 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 214
17-02-28 20:29:08.648 -08 000000083 INF: ===================Camera #2 Frame #214===================
17-02-28 20:29:08.723 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.806 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:29:08.806 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:29:08.806 -08 000000034 INF: ===================Camera #0 Frame #220===================
17-02-28 20:29:08.817 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:29:08.817 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:29:08.817 -08 000000083 INF: ===================Camera #2 Frame #221===================
17-02-28 20:29:08.861 -08 000000077 INF: Y Motor: Unshifted Position: 2039314
17-02-28 20:29:08.911 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:08.975 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:29:08.975 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:29:08.975 -08 000000034 INF: ===================Camera #0 Frame #226===================
17-02-28 20:29:08.989 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:29:08.989 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:29:08.989 -08 000000083 INF: ===================Camera #2 Frame #227===================
17-02-28 20:29:09.035 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.144 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:29:09.144 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:29:09.144 -08 000000034 INF: ===================Camera #0 Frame #233===================
17-02-28 20:29:09.158 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:29:09.158 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:29:09.158 -08 000000083 INF: ===================Camera #2 Frame #233===================
17-02-28 20:29:09.171 -08 000000077 INF: Y Motor: Unshifted Position: 1836940
17-02-28 20:29:09.221 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.316 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:29:09.316 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:29:09.316 -08 000000034 INF: ===================Camera #0 Frame #239===================
17-02-28 20:29:09.328 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 238, frameCount = 239.
17-02-28 20:29:09.328 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 239
17-02-28 20:29:09.328 -08 000000083 INF: ===================Camera #2 Frame #239===================
17-02-28 20:29:09.345 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.484 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:29:09.484 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:29:09.484 -08 000000034 INF: ===================Camera #0 Frame #245===================
17-02-28 20:29:09.485 -08 000000077 INF: Y Motor: Unshifted Position: 1634792
17-02-28 20:29:09.497 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:29:09.497 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:29:09.497 -08 000000083 INF: ===================Camera #2 Frame #246===================
17-02-28 20:29:09.535 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.653 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:29:09.653 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:29:09.653 -08 000000034 INF: ===================Camera #0 Frame #251===================
17-02-28 20:29:09.657 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.669 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:29:09.669 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:29:09.669 -08 000000083 INF: ===================Camera #2 Frame #252===================
17-02-28 20:29:09.797 -08 000000077 INF: Y Motor: Unshifted Position: 1431989
17-02-28 20:29:09.822 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:29:09.822 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:29:09.822 -08 000000034 INF: ===================Camera #0 Frame #258===================
17-02-28 20:29:09.838 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:29:09.838 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:29:09.838 -08 000000083 INF: ===================Camera #2 Frame #258===================
17-02-28 20:29:09.847 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.971 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:09.993 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:29:09.993 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:29:09.993 -08 000000034 INF: ===================Camera #0 Frame #264===================
17-02-28 20:29:10.007 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 263, frameCount = 264.
17-02-28 20:29:10.007 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 264
17-02-28 20:29:10.007 -08 000000083 INF: ===================Camera #2 Frame #264===================
17-02-28 20:29:10.108 -08 000000077 INF: Y Motor: Unshifted Position: 1228307
17-02-28 20:29:10.158 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:10.163 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:29:10.163 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:29:10.163 -08 000000034 INF: ===================Camera #0 Frame #270===================
17-02-28 20:29:10.178 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:29:10.178 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:29:10.178 -08 000000083 INF: ===================Camera #2 Frame #271===================
17-02-28 20:29:10.229 -08 000000078 INF: FPGA: Recv TDIYWAIT
17-02-28 20:29:10.230 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:10.231 -08 000000108 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:29:10.232 -08 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:29:10.232 -08 000000106 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:29:10.232 -08 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:29:10.232 -08 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:29:10.232 -08 000000095 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:29:10.232 -08 000000106 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:29:10.232 -08 000000095 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:29:10.232 -08 000000106 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:29:10.232 -08 000000106 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:29:10.235 -08 000000106 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:29:10.281 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:10.333 -08 000000034 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:29:10.333 -08 000000034 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:29:10.333 -08 000000034 INF: ===================Camera #0 Frame #272===================
17-02-28 20:29:10.340 -08 000000034 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:29:10.341 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:10.421 -08 000000077 INF: Y Motor: Unshifted Position: 1026168
17-02-28 20:29:10.471 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:10.473 -08 000000034 INF: Camera #0 ReleaseBuffer
17-02-28 20:29:10.473 -08 000000083 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:29:10.473 -08 000000083 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:29:10.473 -08 000000083 INF: ===================Camera #2 Frame #272===================
17-02-28 20:29:10.473 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:29:10.477 -08 000000083 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:29:10.478 -08 000000083 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:10.503 -08 000000034 INF: ======================================
17-02-28 20:29:10.605 -08 000000074 INF: FPGA: Recv EX2MV
17-02-28 20:29:10.605 -08 000000074 INF: FPGA: Recv EX1MV
17-02-28 20:29:10.605 -08 000000106 INF: Excitation Filter 1: Moved 107 steps in 372.3442 ms
17-02-28 20:29:10.605 -08 000000106 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.4772 ms
17-02-28 20:29:10.605 -08 000000106 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5491 ms
17-02-28 20:29:10.605 -08 000000095 INF: Excitation Filter 2: Moved 107 steps in 372.5298 ms
17-02-28 20:29:10.605 -08 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.7438 ms
17-02-28 20:29:10.605 -08 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.8148 ms
17-02-28 20:29:10.605 -08 000000106 INF: ======================================
17-02-28 20:29:10.605 -08 000000095 INF: ======================================
17-02-28 20:29:10.607 -08 000000108 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:10.607 -08 000000077 INF: Y Motor: Unshifted Position: 992994
17-02-28 20:29:10.607 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:10.607 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:10.608 -08 000000108 INF: ======================================
17-02-28 20:29:10.646 -08 000000083 INF: Camera #2 ReleaseBuffer
17-02-28 20:29:10.646 -08 000000083 INF: ===================Camera TDI===================
17-02-28 20:29:10.669 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:10.669 -08 000000077 INF: Y Motor: Moved to 14.9299 after 7863 ms
17-02-28 20:29:10.669 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:10.680 -08 000000083 INF: ======================================
17-02-28 20:29:10.682 -08 000000080 INF: ===================Camera TDI===================
17-02-28 20:29:10.683 -08 000000080 INF: ======================================
17-02-28 20:29:10.731 -08 000000077 INF: Y Motor: Recv v 4097\r
17-02-28 20:29:10.731 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:10.731 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:10.793 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:10.793 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:10.793 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:10.855 -08 000000077 INF: Y Motor: Recv v 134217728\r
17-02-28 20:29:10.855 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:29:10.855 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:10.855 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:10.921 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:10.921 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:10.921 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:10.921 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:10.980 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:10.980 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:10.980 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:11.045 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:11.045 -08 000000077 INF: ======================================
17-02-28 20:29:11.046 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:11.047 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:11.048 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.048 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:29:11.105 -08 000000098 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:29:11.105 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:11.169 -08 000000082 INF: FPGA: Recv TDIYERD 1492995
17-02-28 20:29:11.169 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:29:11.229 -08 000000083 INF: FPGA: Recv ZADCR 21508
17-02-28 20:29:11.229 -08 000000042 INF: At scan end Y pos = 14.930 and Z pos = -0.083. Y moved -48.539 mm
17-02-28 20:29:11.229 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:29:11.291 -08 000000028 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:29:11.291 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:29:11.291 -08 000000042 INF: TDIScan finished after 12751.1139 ms
17-02-28 20:29:11.291 -08 000000042 INF: Image[0]: Y should trigger at 63.469 mm, 2nd row was at 64.378 mm (error = 0.909 mm)
17-02-28 20:29:11.291 -08 000000042 INF: Image[2]: Y should trigger at 63.469 mm, 2nd row was at 64.378 mm (error = 0.909 mm)
17-02-28 20:29:11.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.327 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.483 um
17-02-28 20:29:11.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.328 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:29:11.353 -08 000000056 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:29:11.354 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.354 -08 000000095 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:29:11.354 -08 000000102 INF: ===================Dither Clean Up Command===================
17-02-28 20:29:11.354 -08 000000099 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:29:11.355 -08 000000082 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:29:11.355 -08 000000099 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:29:11.355 -08 000000095 INF: ======================================
17-02-28 20:29:11.355 -08 000000099 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:29:11.355 -08 000000082 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:11.355 -08 000000082 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:11.355 -08 000000084 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:29:11.356 -08 000000078 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:11.356 -08 000000084 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:29:11.359 -08 000000078 INF: ===================LFT:Extracting coords===================
17-02-28 20:29:11.384 -08 000000078 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:11.384 -08 000000078 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:29:11.385 -08 000000088 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.385 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.385 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.385 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.385 -08 000000088 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:11.386 -08 000000028 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:11.386 -08 000000090 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:11.386 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:11.415 -08 000000062 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:11.415 -08 000000062 INF: FPGA: Recv ZSEL 
17-02-28 20:29:11.415 -08 000000084 INF: FPGA: Xmit ZDACW 26370\n
17-02-28 20:29:11.416 -08 000000099 INF: ======================================
17-02-28 20:29:11.417 -08 000000082 INF: Y Motor: Recv ok\r
17-02-28 20:29:11.417 -08 000000082 INF: ======================================
17-02-28 20:29:11.460 -08 000000088 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:11.460 -08 000000090 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:11.460 -08 000000028 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:11.460 -08 000000077 INF: FC:B, C:3,L:5, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:11.477 -08 000000044 INF: FPGA: Recv ZDACW 
17-02-28 20:29:11.478 -08 000000084 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:29:11.478 -08 000000084 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:29:11.543 -08 000000082 INF: FPGA: Recv TDIBB
17-02-28 20:29:11.543 -08 000000084 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:29:11.544 -08 000000084 INF: ======================================
17-02-28 20:29:11.611 -08 000000088 INF: LFT found best fwhm score 2.005609 in 151 ms
17-02-28 20:29:11.611 -08 000000090 INF: LFT found best fwhm score 2.000037 in 151 ms
17-02-28 20:29:11.611 -08 000000090 INF: LFT found good score at index 7605 with fwhm value 2.000037. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:5,B
17-02-28 20:29:11.611 -08 000000088 INF: LFT found good score at index 5037 with fwhm value 2.005609. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:5,B
17-02-28 20:29:11.611 -08 000000028 INF: LFT found best fwhm score 2.00106 in 151 ms
17-02-28 20:29:11.611 -08 000000088 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.611 -08 000000028 INF: LFT found good score at index 2673 with fwhm value 2.00106. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:5,B
17-02-28 20:29:11.611 -08 000000077 INF: LFT found best fwhm score 2.000074 in 151 ms
17-02-28 20:29:11.611 -08 000000077 INF: LFT found good score at index 5025 with fwhm value 2.000074. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:5,B
17-02-28 20:29:11.612 -08 000000088 INF: ======================================
17-02-28 20:29:11.612 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.612 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.612 -08 000000028 INF: ======================================
17-02-28 20:29:11.612 -08 000000077 INF: ======================================
17-02-28 20:29:11.612 -08 000000090 INF: ===================LookupFocusTracking===================
17-02-28 20:29:11.612 -08 000000090 INF: ======================================
17-02-28 20:29:11.613 -08 000000078 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:11.614 -08 000000078 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:5,B
17-02-28 20:29:11.614 -08 000000078 INF: ======================================
17-02-28 20:29:11.615 -08 000000102 INF: ======================================
17-02-28 20:29:11.616 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:29:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:29:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:29:11.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:29:11.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:11.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:29:11.618 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:29:11.619 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:29:11.619 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:29:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:29:11.619 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5, Swath 2 - X = 80.79618 Y = 39.78827===================
17-02-28 20:29:11.642 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:29:11.642 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:29:11.643 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:11.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:29:11.643 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:29:11.643 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 5===================
17-02-28 20:29:11.644 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:29:11.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.661 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.662 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:11.662 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:11.726 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":5,"Tile":2206,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF241","HCSMMF245","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.739 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:11.740 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.741 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:29:11.741 -08 000000042 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:29:11.743 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.744 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.758 -08 000000071 INF: ===================Move Tilt Motor 2===================
17-02-28 20:29:11.759 -08 000000071 INF: ======================================
17-02-28 20:29:11.760 -08 000000033 INF: ===================Move Tilt Motor 3===================
17-02-28 20:29:11.761 -08 000000033 INF: ======================================
17-02-28 20:29:11.873 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":5,"Tile":2209,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF262","HCSMMF186","HCSMMF248"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.875 -08 000000069 INF: ===================Move Tilt Motor 1===================
17-02-28 20:29:11.877 -08 000000069 INF: ======================================
17-02-28 20:29:11.889 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:11.904 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:29:11.925 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:29:11.925 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:29:11.925 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:29:11.926 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:11.927 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:11.933 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:29:11.933 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:29:11.934 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:29:11.947 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":5,"Tile":2204,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF250","HCSMMF252","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.948 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":5,"Tile":2208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF211","HCSMMF192","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.949 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":5,"Tile":2201,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF232","HCSMMF188","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.949 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":5,"Tile":2211,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF244","HCSMMF202","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.950 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":5,"Tile":2215,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF203","HCSMMF231","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.951 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":5,"Tile":2202,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF223","HCSMMF210","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.951 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":5,"Tile":2212,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF243","HCSMMF282","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.953 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":5,"Tile":2205,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF213","HCSMMF269","HCSMMF205"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.953 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":5,"Tile":2203,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF236","HCSMMF258","HCSMMF224","HCSMMF285"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.954 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":5,"Tile":2216,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF194","HCSMMF201","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.955 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":5,"Tile":2217,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF219","HCSMMF196","HCSMMF229","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.955 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":5,"Tile":2210,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF268","HCSMMF190","HCSMMF228"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.956 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":5,"Tile":2218,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF222","HCSMMF225","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.957 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":5,"Tile":2207,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF199","HCSMMF271","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.957 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":5,"Tile":2214,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF198","HCSMMF280","HCSMMF215","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.958 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":5,"Tile":2213,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF227","HCSMMF246","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.960 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":5,"Tile":2221,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF287","HCSMMF264","HCSMMF281","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.961 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":5,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF283","HCSMMF212","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.962 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":5,"Tile":2225,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF249","HCSMMF266","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.962 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":5,"Tile":2224,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF217","HCSMMF208","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.963 -08 000000076 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":5,"Tile":2220,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF178","HCSMMF255","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.964 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":5,"Tile":2219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF235","HCSMMF204","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.967 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":5,"Tile":2227,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF273","HCSMMF251","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.967 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":5,"Tile":2226,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF272","HCSMMF247","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.968 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":5,"Tile":2223,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF256","HCSMMF276","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.971 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 5 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":5,"Tile":2228,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF275","HCSMMF230","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:11.974 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:11.980 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:29:11.994 -08 000000054 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:11.995 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:11.995 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:29:11.995 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1006 mm
17-02-28 20:29:11.995 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:29:12.057 -08 000000083 INF: FPGA: Recv ZTRG 
17-02-28 20:29:12.057 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:29:12.067 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:12.067 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:29:12.104 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:12.110 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:29:12.118 -08 000000084 INF: FPGA: Recv ZYT 
17-02-28 20:29:12.118 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:29:12.118 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:29:12.180 -08 000000052 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:29:12.180 -08 000000052 INF: FPGA: Recv ZMV 
17-02-28 20:29:12.180 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:29:12.180 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.0625 ms
17-02-28 20:29:12.180 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:29:12.199 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:12.205 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:29:12.242 -08 000000089 INF: FPGA: Recv ZDACR 60292
17-02-28 20:29:12.242 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.1691 ms w/comms
17-02-28 20:29:12.242 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:29:12.242 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.4033 ms
17-02-28 20:29:12.243 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:12.243 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:29:12.252 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:29:12.252 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:12.252 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:12.252 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:29:12.252 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:29:12.300 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:12.304 -08 000000047 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:12.306 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:29:12.315 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:12.315 -08 000000042 INF: Transformed XStagePosition from 83.01064 mm to 83.0106353759766 mm.
17-02-28 20:29:12.324 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:29:12.324 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:12.324 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:12.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:12.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:29:12.326 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:12.326 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = F_1
17-02-28 20:29:12.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:12.327 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:12.328 -08 000000100 INF: ===================Move X,Y===================
17-02-28 20:29:12.328 -08 000000106 INF: ===================MoveEmissionFilters===================
17-02-28 20:29:12.329 -08 000000100 INF: ===================Move X,Y, Parallel===================
17-02-28 20:29:12.329 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:12.329 -08 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:12.329 -08 000000028 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:12.329 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:12.330 -08 000000068 INF: ===================Move X Motor without settling===================
17-02-28 20:29:12.330 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:12.330 -08 000000068 INF: X Motor: Xmit PR VM\n
17-02-28 20:29:12.330 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:12.330 -08 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:12.330 -08 000000077 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9299 mm
17-02-28 20:29:12.330 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:12.330 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:12.330 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:12.330 -08 000000028 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:12.331 -08 000000058 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:29:12.331 -08 000000056 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:29:12.331 -08 000000088 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:29:12.331 -08 000000034 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:29:12.331 -08 000000038 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:29:12.331 -08 000000051 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:29:12.332 -08 000000038 INF: ======================================
17-02-28 20:29:12.332 -08 000000058 INF: ======================================
17-02-28 20:29:12.332 -08 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:29:12.332 -08 000000088 INF: ======================================
17-02-28 20:29:12.332 -08 000000105 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:29:12.332 -08 000000089 INF: ======================================
17-02-28 20:29:12.333 -08 000000105 INF: ======================================
17-02-28 20:29:12.334 -08 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:12.334 -08 000000056 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:29:12.334 -08 000000034 INF: ======================================
17-02-28 20:29:12.335 -08 000000051 INF: ======================================
17-02-28 20:29:12.335 -08 000000084 INF: ======================================
17-02-28 20:29:12.335 -08 000000056 INF: ======================================
17-02-28 20:29:12.336 -08 000000080 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:12.336 -08 000000028 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:12.337 -08 000000086 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:12.337 -08 000000080 INF: ======================================
17-02-28 20:29:12.338 -08 000000028 INF: ======================================
17-02-28 20:29:12.338 -08 000000086 INF: ======================================
17-02-28 20:29:12.339 -08 000000106 INF: ======================================
17-02-28 20:29:12.368 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:12.368 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:12.368 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:12.368 -08 000000068 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:29:12.368 -08 000000068 INF: X Motor: Xmit PR VI\n
17-02-28 20:29:12.395 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:12.433 -08 000000068 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:29:12.433 -08 000000068 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:29:12.433 -08 000000068 INF: X Motor: Moving to 83.0106 mm @15.000 mm/sec, started at 80.7725 mm
17-02-28 20:29:12.433 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:12.433 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:12.433 -08 000000068 INF: X Motor: Xmit MA 9835\n
17-02-28 20:29:12.495 -08 000000068 INF: X Motor: Recv MA 9835\r\n>
17-02-28 20:29:12.495 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:12.495 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:12.495 -08 000000068 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:29:12.495 -08 000000077 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:29:12.495 -08 000000077 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:29:12.557 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:12.557 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:29:12.557 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:12.619 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:12.619 -08 000000077 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:29:12.619 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:12.683 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:29:12.745 -08 000000077 INF: Y Motor: Unshifted Position: 1074460
17-02-28 20:29:12.795 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:12.921 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.056 -08 000000077 INF: Y Motor: Unshifted Position: 1777996
17-02-28 20:29:13.106 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.119 -08 000000068 INF: X Motor: Xmit PR ER\n
17-02-28 20:29:13.181 -08 000000068 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:29:13.181 -08 000000068 INF: X Motor: Moved to 83.0112 after 686 ms
17-02-28 20:29:13.181 -08 000000068 INF: ======================================
17-02-28 20:29:13.231 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.367 -08 000000077 INF: Y Motor: Unshifted Position: 2560516
17-02-28 20:29:13.417 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.545 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.680 -08 000000077 INF: Y Motor: Unshifted Position: 3343784
17-02-28 20:29:13.730 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.855 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:13.991 -08 000000077 INF: Y Motor: Unshifted Position: 4143853
17-02-28 20:29:14.041 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:14.168 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:14.304 -08 000000077 INF: Y Motor: Unshifted Position: 4904634
17-02-28 20:29:14.354 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:14.478 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:14.617 -08 000000077 INF: Y Motor: Unshifted Position: 5678241
17-02-28 20:29:14.667 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:14.790 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:14.929 -08 000000077 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:29:14.929 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:14.929 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:14.991 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:14.991 -08 000000077 INF: Y Motor: Moved to 64.5335 after 2372 ms
17-02-28 20:29:14.991 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:15.055 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:29:15.055 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:15.055 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:15.115 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:15.115 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:15.115 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:15.178 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:29:15.178 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:29:15.178 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:15.178 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:15.239 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:29:15.239 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:15.239 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:15.239 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:15.301 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:15.301 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:15.301 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:15.363 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:29:15.363 -08 000000077 INF: ======================================
17-02-28 20:29:15.365 -08 000000100 INF: ===================Move X,Y===================
17-02-28 20:29:15.366 -08 000000100 INF: ======================================
17-02-28 20:29:15.368 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:15.369 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:15.369 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:29:15.369 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:29:15.428 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:15.428 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:29:15.488 -08 000000083 INF: FPGA: Recv ZFREQCL
17-02-28 20:29:15.489 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:29:15.489 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:15.489 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:15.550 -08 000000091 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:29:15.550 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:29:15.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:15.551 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:15.552 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:29:15.552 -08 000000054 INF: ===================Set YMotor gains for scans===================
17-02-28 20:29:15.552 -08 000000054 INF: ======================================
17-02-28 20:29:15.552 -08 000000087 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:29:15.553 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:29:15.554 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:29:15.555 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:29:15.555 -08 000000087 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:29:15.613 -08 000000100 INF: FPGA: Recv TDIYPOS
17-02-28 20:29:15.614 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:29:15.616 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:29:15.617 -08 000000087 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:29:15.674 -08 000000028 INF: FPGA: Recv TDIYARM2
17-02-28 20:29:15.674 -08 000000087 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:29:15.676 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:29:15.677 -08 000000087 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:29:15.677 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:29:15.679 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:29:15.680 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:29:15.680 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:16.050 -08 000000087 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:29:16.050 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:29:16.050 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:16.066 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:29:16.068 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:16.462 -08 000000087 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821386880 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:29:16.462 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:29:16.462 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:16.477 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:29:16.479 -08 000000087 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:29:16.481 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:29:16.484 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:16.485 -08 000000087 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:29:16.485 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:16.488 -08 000000087 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:29:16.488 -08 000000087 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:29:16.488 -08 000000087 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:29:16.488 -08 000000087 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:29:16.549 -08 000000069 INF: FPGA: Recv ZYT 
17-02-28 20:29:16.549 -08 000000087 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:29:16.549 -08 000000087 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:29:16.611 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:29:16.611 -08 000000087 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8109 ms
17-02-28 20:29:16.611 -08 000000087 INF: Z Motor: ArmAbsStepped took 122.7913 ms
17-02-28 20:29:16.611 -08 000000087 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:16.613 -08 000000087 INF: ===================TDI Scan Setup===================
17-02-28 20:29:16.614 -08 000000087 INF: ======================================
17-02-28 20:29:16.615 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:16.616 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:16.616 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:16.616 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:16.617 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:16.618 -08 000000108 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:29:16.618 -08 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:29:16.618 -08 000000108 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:29:16.618 -08 000000108 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:29:16.618 -08 000000108 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:29:16.618 -08 000000086 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:29:16.618 -08 000000086 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:29:16.618 -08 000000086 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:29:16.618 -08 000000108 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:29:16.621 -08 000000086 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:29:16.986 -08 000000078 INF: FPGA: Recv EX2MV
17-02-28 20:29:16.986 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:29:16.986 -08 000000086 INF: Excitation Filter 1: Moved -107 steps in 367.924 ms
17-02-28 20:29:16.986 -08 000000086 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.0506 ms
17-02-28 20:29:16.986 -08 000000086 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.1315 ms
17-02-28 20:29:16.986 -08 000000108 INF: Excitation Filter 2: Moved -107 steps in 368.0601 ms
17-02-28 20:29:16.986 -08 000000108 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.4786 ms
17-02-28 20:29:16.986 -08 000000108 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.5619 ms
17-02-28 20:29:16.987 -08 000000086 INF: ======================================
17-02-28 20:29:16.987 -08 000000108 INF: ======================================
17-02-28 20:29:16.988 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:16.989 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:16.990 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:29:16.990 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:16.990 -08 000000095 INF: ===================Serial===================
17-02-28 20:29:16.990 -08 000000098 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:16.990 -08 000000098 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:29:16.991 -08 000000098 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:16.991 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:16.991 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:29:16.991 -08 000000069 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:29:16.991 -08 000000069 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:29:16.992 -08 000000095 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:29:16.992 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:29:16.992 -08 000000088 INF: ===================Camera TDI===================
17-02-28 20:29:16.993 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:16.993 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:16.993 -08 000000095 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:29:16.994 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:16.994 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.050 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:29:17.050 -08 000000098 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:17.050 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:17.112 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:29:17.112 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:17.143 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:17.143 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.144 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:17.144 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.174 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:29:17.174 -08 000000098 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:17.174 -08 000000098 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:29:17.174 -08 000000098 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:29:17.236 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:29:17.236 -08 000000098 INF: Y Motor: Start the move command
17-02-28 20:29:17.236 -08 000000098 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:17.293 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:17.293 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.294 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:17.294 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.301 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:29:17.301 -08 000000098 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:29:17.301 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:17.425 -08 000000098 INF: Y Motor: Unshifted Position: 5934883
17-02-28 20:29:17.443 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:17.443 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.444 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:17.444 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:17.475 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:17.593 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:29:17.593 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:29:17.593 -08 000000091 INF: ===================Camera #0 Frame #1===================
17-02-28 20:29:17.594 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:29:17.594 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:29:17.594 -08 000000088 INF: ===================Camera #2 Frame #1===================
17-02-28 20:29:17.599 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:17.738 -08 000000098 INF: Y Motor: Unshifted Position: 5888380
17-02-28 20:29:17.748 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:29:17.748 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:29:17.748 -08 000000091 INF: ===================Camera #0 Frame #3===================
17-02-28 20:29:17.749 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:29:17.749 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:29:17.749 -08 000000088 INF: ===================Camera #2 Frame #3===================
17-02-28 20:29:17.788 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:17.905 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:29:17.905 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:29:17.905 -08 000000088 INF: ===================Camera #2 Frame #4===================
17-02-28 20:29:17.907 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:29:17.907 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:29:17.907 -08 000000091 INF: ===================Camera #0 Frame #4===================
17-02-28 20:29:17.911 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:18.050 -08 000000098 INF: Y Motor: Unshifted Position: 5841522
17-02-28 20:29:18.060 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:18.060 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:18.060 -08 000000088 INF: ===================Camera #2 Frame #5===================
17-02-28 20:29:18.062 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:18.062 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:18.062 -08 000000091 INF: ===================Camera #0 Frame #5===================
17-02-28 20:29:18.100 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:18.110 -08 000000079 INF: FPGA: Recv ZWAIT 
17-02-28 20:29:18.110 -08 000000079 INF: FPGA: Recv TDIYWAIT
17-02-28 20:29:18.110 -08 000000095 INF: ===================Serial===================
17-02-28 20:29:18.110 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:18.112 -08 000000095 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:29:18.112 -08 000000069 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:29:18.112 -08 000000095 INF: ===================Serial===================
17-02-28 20:29:18.113 -08 000000033 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:29:18.113 -08 000000028 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:29:18.113 -08 000000033 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:29:18.113 -08 000000033 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:29:18.113 -08 000000033 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:29:18.113 -08 000000028 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:29:18.113 -08 000000033 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:29:18.113 -08 000000028 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:29:18.113 -08 000000028 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:29:18.114 -08 000000095 INF: ======================================
17-02-28 20:29:18.116 -08 000000028 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:29:18.213 -08 000000088 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:29:18.213 -08 000000088 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:29:18.213 -08 000000088 INF: ===================Camera #2 Frame #6===================
17-02-28 20:29:18.215 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:29:18.215 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:29:18.215 -08 000000091 INF: ===================Camera #0 Frame #6===================
17-02-28 20:29:18.216 -08 000000088 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:29:18.217 -08 000000088 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:18.218 -08 000000091 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:29:18.219 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:18.224 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:18.255 -08 000000088 INF: Camera #2 ReleaseBuffer
17-02-28 20:29:18.255 -08 000000088 INF: ===================Camera TDI===================
17-02-28 20:29:18.257 -08 000000088 INF: ======================================
17-02-28 20:29:18.266 -08 000000091 INF: Camera #0 ReleaseBuffer
17-02-28 20:29:18.266 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:29:18.267 -08 000000091 INF: ======================================
17-02-28 20:29:18.269 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:29:18.271 -08 000000090 INF: ======================================
17-02-28 20:29:18.360 -08 000000098 INF: Y Motor: Unshifted Position: 5797057
17-02-28 20:29:18.410 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:18.482 -08 000000052 INF: FPGA: Recv EX1MV
17-02-28 20:29:18.482 -08 000000052 INF: FPGA: Recv EX2MV
17-02-28 20:29:18.482 -08 000000028 INF: Excitation Filter 2: Moved 107 steps in 368.4122 ms
17-02-28 20:29:18.482 -08 000000033 INF: Excitation Filter 1: Moved 107 steps in 368.5981 ms
17-02-28 20:29:18.482 -08 000000028 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.5897 ms
17-02-28 20:29:18.482 -08 000000028 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 368.6992 ms
17-02-28 20:29:18.482 -08 000000033 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 368.7227 ms
17-02-28 20:29:18.482 -08 000000033 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 368.9295 ms
17-02-28 20:29:18.482 -08 000000028 INF: ======================================
17-02-28 20:29:18.483 -08 000000033 INF: ======================================
17-02-28 20:29:18.484 -08 000000069 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:18.485 -08 000000069 INF: ======================================
17-02-28 20:29:18.549 -08 000000098 INF: Y Motor: Unshifted Position: 5797043
17-02-28 20:29:18.549 -08 000000098 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:18.549 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:18.611 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:29:18.611 -08 000000098 INF: Y Motor: Moved to 62.9704 after 1309 ms
17-02-28 20:29:18.611 -08 000000098 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:18.673 -08 000000098 INF: Y Motor: Recv v 4097\r
17-02-28 20:29:18.673 -08 000000098 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:18.673 -08 000000098 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:18.736 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:29:18.736 -08 000000098 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:18.736 -08 000000098 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:18.798 -08 000000098 INF: Y Motor: Recv v 134217728\r
17-02-28 20:29:18.798 -08 000000098 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:29:18.798 -08 000000098 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:18.798 -08 000000098 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:18.860 -08 000000098 INF: Y Motor: Recv v 0\r
17-02-28 20:29:18.860 -08 000000098 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:18.860 -08 000000098 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:18.860 -08 000000098 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:18.923 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:29:18.923 -08 000000098 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:18.923 -08 000000098 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:18.984 -08 000000098 INF: Y Motor: Recv ok\r
17-02-28 20:29:18.984 -08 000000098 INF: ======================================
17-02-28 20:29:18.985 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:18.986 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:18.987 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:18.987 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:29:19.044 -08 000000044 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:29:19.044 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:19.108 -08 000000076 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:29:19.109 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:29:19.171 -08 000000077 INF: FPGA: Recv ZADCR 2424
17-02-28 20:29:19.171 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:29:19.171 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:29:19.233 -08 000000074 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:29:19.233 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:29:19.233 -08 000000042 INF: TDIScan finished after 6917.079 ms
17-02-28 20:29:19.233 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:29:19.233 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:29:19.233 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:29:19.295 -08 000000033 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:29:19.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.296 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.297 -08 000000052 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:29:19.297 -08 000000090 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:29:19.297 -08 000000032 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:29:19.298 -08 000000052 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:19.298 -08 000000052 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:19.298 -08 000000090 INF: ======================================
17-02-28 20:29:19.298 -08 000000032 INF: ======================================
17-02-28 20:29:19.359 -08 000000052 INF: Y Motor: Recv ok\r
17-02-28 20:29:19.359 -08 000000052 INF: ======================================
17-02-28 20:29:19.360 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.361 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.362 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:29:19.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.393 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:29:19.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:29:19.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.460 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:29:19.497 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:19.497 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:19.498 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:19.499 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:29:19.506 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:19.507 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:29:19.507 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:29:20.191 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1, Selecting focus point===================
17-02-28 20:29:20.214 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0807308170042333Best Z position at top surface = -0.152351136910948Best Z position at top surface + compensator offset = -0.129651136910948 C:3,L:6,B
17-02-28 20:29:20.215 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.152351136910948
17-02-28 20:29:20.215 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94002
17-02-28 20:29:20.215 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0807308170042333
17-02-28 20:29:20.215 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59537
17-02-28 20:29:20.215 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0807308170042333.
17-02-28 20:29:20.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:20.348 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:29:20.348 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:29:20.418 -08 000000083 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:20.418 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Focus Point 1===================
17-02-28 20:29:20.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.420 -08 000000042 INF: Lane 6, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:29:20.420 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.421 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.421 -08 000000044 INF: ===================Move Tilt Motor 1===================
17-02-28 20:29:20.421 -08 000000078 INF: ===================Move Tilt Motor 2===================
17-02-28 20:29:20.422 -08 000000032 INF: ===================Move Tilt Motor 3===================
17-02-28 20:29:20.422 -08 000000044 INF: ======================================
17-02-28 20:29:20.422 -08 000000078 INF: ======================================
17-02-28 20:29:20.422 -08 000000032 INF: ======================================
17-02-28 20:29:20.423 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.424 -08 000000042 INF: ETF Best Z: -0.08073082 mm (21163 DAC)
17-02-28 20:29:20.424 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.425 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:29:20.425 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.426 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:20.432 -08 000000042 INF: Swath 1 position calculated to be: {X=82.45318, Y=39.78827} from estimated center X= 82.97199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:29:20.432 -08 000000042 INF: Swath 2 position calculated to be: {X=83.56118, Y=39.78827} from estimated center X= 82.97199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:29:20.869 -08 000000042 INF: Swath 0: Converted transform from (-41.199, -2.462193) pixels to (-0.014145, -0.00069) mm.
17-02-28 20:29:20.875 -08 000000042 INF: Swath 1: Converted transform from (-68.42889, -3.511217) pixels to (-0.02346, -0.00138) mm.
17-02-28 20:29:20.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:29:20.876 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:29:20.877 -08 000000042 INF: Transformed XStagePosition from 82.45318 mm to 82.4390334058553 mm.
17-02-28 20:29:20.888 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5775878014984 mm.
17-02-28 20:29:20.888 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3775878014984 mm.
17-02-28 20:29:20.888 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4683378014984 mm.
17-02-28 20:29:20.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:20.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:29:20.890 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:20.891 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = F_1
17-02-28 20:29:20.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:20.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:20.897 -08 000000100 INF: ===================MoveEmissionFilters===================
17-02-28 20:29:20.897 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:20.897 -08 000000089 INF: ===================Move X,Y===================
17-02-28 20:29:20.898 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:20.898 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:29:20.898 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:20.898 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:20.898 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:20.898 -08 000000089 INF: ===================Move X,Y, Parallel===================
17-02-28 20:29:20.898 -08 000000030 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:29:20.899 -08 000000030 INF: Z Motor: Moving to -0.1007 mm, started at -0.0100 mm
17-02-28 20:29:20.899 -08 000000030 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:29:20.899 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:20.899 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:20.899 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:20.899 -08 000000032 INF: ===================Move X Motor without settling===================
17-02-28 20:29:20.899 -08 000000079 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:20.900 -08 000000032 INF: X Motor: Xmit PR VM\n
17-02-28 20:29:20.900 -08 000000074 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:29:20.900 -08 000000062 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:29:20.900 -08 000000047 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:29:20.900 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:20.900 -08 000000058 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:29:20.900 -08 000000054 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:29:20.900 -08 000000076 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:29:20.900 -08 000000079 INF: Y Motor: Moving to 64.5776 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:29:20.900 -08 000000076 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:29:20.900 -08 000000074 INF: ======================================
17-02-28 20:29:20.900 -08 000000079 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:20.900 -08 000000079 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:20.900 -08 000000076 INF: ======================================
17-02-28 20:29:20.901 -08 000000054 INF: ======================================
17-02-28 20:29:20.901 -08 000000062 INF: ======================================
17-02-28 20:29:20.902 -08 000000102 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:20.902 -08 000000098 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:29:20.902 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:29:20.902 -08 000000077 INF: ======================================
17-02-28 20:29:20.902 -08 000000098 INF: ======================================
17-02-28 20:29:20.903 -08 000000102 INF: ======================================
17-02-28 20:29:20.903 -08 000000058 INF: ======================================
17-02-28 20:29:20.903 -08 000000047 INF: ======================================
17-02-28 20:29:20.904 -08 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:20.904 -08 000000044 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:20.905 -08 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:20.905 -08 000000087 INF: ======================================
17-02-28 20:29:20.905 -08 000000044 INF: ======================================
17-02-28 20:29:20.906 -08 000000038 INF: ======================================
17-02-28 20:29:20.907 -08 000000100 INF: ======================================
17-02-28 20:29:20.918 -08 000000099 INF: FPGA: Recv ZTRG 
17-02-28 20:29:20.918 -08 000000030 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:29:20.980 -08 000000077 INF: FPGA: Recv ZYT 
17-02-28 20:29:20.980 -08 000000030 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:29:20.980 -08 000000030 INF: FPGA: Xmit ZMV 26406\n
17-02-28 20:29:20.982 -08 000000032 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:29:20.982 -08 000000032 INF: X Motor: Xmit PR VI\n
17-02-28 20:29:20.982 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:29:20.982 -08 000000079 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:20.982 -08 000000079 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:21.042 -08 000000090 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:29:21.042 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:29:21.044 -08 000000032 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:29:21.044 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:29:21.044 -08 000000079 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:21.044 -08 000000032 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:29:21.044 -08 000000032 INF: X Motor: Moving to 82.4390 mm @15.000 mm/sec, started at 83.0112 mm
17-02-28 20:29:21.044 -08 000000032 INF: X Motor: Xmit MA 9601\n
17-02-28 20:29:21.104 -08 000000074 INF: FPGA: Recv ZMV 
17-02-28 20:29:21.104 -08 000000030 INF: Z Motor: MoveAndTrigger 'ZMV' command took 124.247 ms
17-02-28 20:29:21.104 -08 000000030 INF: FPGA: Xmit ZDACR\n
17-02-28 20:29:21.106 -08 000000032 INF: X Motor: Recv MA 9601\r\n>
17-02-28 20:29:21.106 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:29:21.106 -08 000000079 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:21.106 -08 000000079 INF: Y Motor: Set target position to 5957759 encoder counts
17-02-28 20:29:21.106 -08 000000079 INF: Y Motor: Xmit s r0xca 5957759\r
17-02-28 20:29:21.106 -08 000000032 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:29:21.166 -08 000000029 INF: FPGA: Recv ZDACR 26406
17-02-28 20:29:21.166 -08 000000030 INF: Z Motor: MoveAndTrigger took 267.583 ms w/comms
17-02-28 20:29:21.166 -08 000000030 INF: Z Motor: After move to -0.1007, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:29:21.166 -08 000000030 INF: Z Motor: MoveAbsStepped took 267.7236 ms
17-02-28 20:29:21.167 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:21.168 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:29:21.169 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:29:21.169 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:29:21.169 -08 000000079 INF: Y Motor: Start the move command
17-02-28 20:29:21.169 -08 000000079 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:21.169 -08 000000087 INF: ===================Camera Arm TDI===================
17-02-28 20:29:21.169 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:21.170 -08 000000087 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:21.170 -08 000000044 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:29:21.170 -08 000000087 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:21.171 -08 000000044 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:21.171 -08 000000044 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:29:21.228 -08 000000102 INF: FPGA: Recv ZSEL 
17-02-28 20:29:21.228 -08 000000044 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:21.229 -08 000000044 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:29:21.230 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:29:21.230 -08 000000079 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:29:21.230 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:21.290 -08 000000100 INF: FPGA: Recv TDIBB
17-02-28 20:29:21.290 -08 000000044 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:21.291 -08 000000044 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:29:21.292 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:21.293 -08 000000044 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:29:21.293 -08 000000044 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:29:21.294 -08 000000044 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:29:21.355 -08 000000108 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:21.355 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:21.357 -08 000000079 INF: Y Motor: Unshifted Position: 5877698
17-02-28 20:29:21.357 -08 000000044 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:29:21.357 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:21.359 -08 000000044 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:29:21.359 -08 000000044 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:29:21.359 -08 000000044 INF: Z Motor: Arming to move to -0.0607 mm
17-02-28 20:29:21.359 -08 000000044 INF: FPGA: Xmit ZYT 6437759 4\n
17-02-28 20:29:21.407 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:21.417 -08 000000086 INF: FPGA: Recv ZYT 
17-02-28 20:29:21.417 -08 000000044 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6377698 enc / 63.777 mm / ) = 6437759 enc / 64.378 mm
17-02-28 20:29:21.417 -08 000000044 INF: FPGA: Xmit ZARM 15920\n
17-02-28 20:29:21.479 -08 000000084 INF: FPGA: Recv ZARM
17-02-28 20:29:21.479 -08 000000044 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.1229 ms
17-02-28 20:29:21.479 -08 000000044 INF: Z Motor: ArmAbsStepped took 120.0751 ms
17-02-28 20:29:21.479 -08 000000044 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:21.481 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:29:21.482 -08 000000044 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:29:21.483 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:29:21.484 -08 000000044 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:29:21.485 -08 000000044 INF: ===================TDI Scan Setup===================
17-02-28 20:29:21.486 -08 000000044 INF: ======================================
17-02-28 20:29:21.531 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:21.543 -08 000000032 INF: X Motor: Xmit PR ER\n
17-02-28 20:29:21.605 -08 000000032 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:29:21.605 -08 000000032 INF: X Motor: Moved to 82.4399 after 499 ms
17-02-28 20:29:21.605 -08 000000032 INF: ======================================
17-02-28 20:29:21.667 -08 000000079 INF: Y Motor: Unshifted Position: 5957760
17-02-28 20:29:21.667 -08 000000079 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:21.667 -08 000000079 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:21.729 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:29:21.729 -08 000000079 INF: Y Motor: Moved to 64.5776 after 499 ms
17-02-28 20:29:21.729 -08 000000079 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:21.791 -08 000000079 INF: Y Motor: Recv v 4096\r
17-02-28 20:29:21.791 -08 000000079 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:21.791 -08 000000079 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:21.856 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:29:21.856 -08 000000079 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:21.856 -08 000000079 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:21.916 -08 000000079 INF: Y Motor: Recv v 402653184\r
17-02-28 20:29:21.916 -08 000000079 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:29:21.916 -08 000000079 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:21.916 -08 000000079 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:21.982 -08 000000079 INF: Y Motor: Recv v 0\r
17-02-28 20:29:21.982 -08 000000079 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:21.982 -08 000000079 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:21.982 -08 000000079 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:22.043 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:29:22.043 -08 000000079 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:22.043 -08 000000079 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:22.105 -08 000000079 INF: Y Motor: Recv ok\r
17-02-28 20:29:22.105 -08 000000079 INF: ======================================
17-02-28 20:29:22.106 -08 000000089 INF: ===================Move X,Y===================
17-02-28 20:29:22.107 -08 000000089 INF: ======================================
17-02-28 20:29:22.129 -08 000000087 INF: Camera #0 AttachBuffer (imageDataPtr = 56924180528 imgPtr = 56924180528 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:29:22.129 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:29:22.129 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:22.144 -08 000000087 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:22.146 -08 000000087 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:23.179 -08 000000087 INF: Camera #2 AttachBuffer (imageDataPtr = 58736119856 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:29:23.179 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:29:23.179 -08 000000087 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:23.196 -08 000000087 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:23.197 -08 000000087 INF: ===================Camera Arm TDI===================
17-02-28 20:29:23.199 -08 000000087 INF: ======================================
17-02-28 20:29:23.200 -08 000000030 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:23.201 -08 000000030 INF: ======================================
17-02-28 20:29:23.202 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:23.203 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:23.203 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:29:23.203 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:29:23.289 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:23.289 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:29:23.349 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:29:23.349 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:29:23.349 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:23.349 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:23.414 -08 000000078 INF: FPGA: Recv TDIYERD 6457760
17-02-28 20:29:23.414 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457760 counts (64.578 mm)
17-02-28 20:29:23.414 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:23.415 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:23.415 -08 000000082 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:23.415 -08 000000087 INF: ===================Set YMotor gains for scans===================
17-02-28 20:29:23.416 -08 000000087 INF: ======================================
17-02-28 20:29:23.416 -08 000000082 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:23.417 -08 000000082 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:29:23.417 -08 000000082 INF: FPGA: Xmit TDIYPOS 6346834\n
17-02-28 20:29:23.476 -08 000000083 INF: FPGA: Recv TDIYPOS
17-02-28 20:29:23.476 -08 000000082 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:23.477 -08 000000082 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:29:23.477 -08 000000082 INF: FPGA: Xmit TDIYARM3 139264 6437759 1 1\n
17-02-28 20:29:23.538 -08 000000090 INF: FPGA: Recv TDIYARM3
17-02-28 20:29:23.538 -08 000000082 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:23.539 -08 000000082 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:23.540 -08 000000082 INF: ======================================
17-02-28 20:29:23.541 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:23.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:23.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:23.542 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:23.543 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:23.544 -08 000000052 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:29:23.544 -08 000000088 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:29:23.544 -08 000000052 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:29:23.544 -08 000000052 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:29:23.544 -08 000000052 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:29:23.544 -08 000000088 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:29:23.544 -08 000000052 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:29:23.544 -08 000000088 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:29:23.544 -08 000000088 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:29:23.545 -08 000000088 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:29:23.913 -08 000000068 INF: FPGA: Recv EX1MV
17-02-28 20:29:23.913 -08 000000068 INF: FPGA: Recv EX2MV
17-02-28 20:29:23.913 -08 000000088 INF: Excitation Filter 2: Moved -107 steps in 368.6578 ms
17-02-28 20:29:23.913 -08 000000088 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.7859 ms
17-02-28 20:29:23.913 -08 000000088 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.8573 ms
17-02-28 20:29:23.913 -08 000000052 INF: Excitation Filter 1: Moved -107 steps in 368.8535 ms
17-02-28 20:29:23.913 -08 000000052 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.0554 ms
17-02-28 20:29:23.913 -08 000000052 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.123 ms
17-02-28 20:29:23.913 -08 000000088 INF: ======================================
17-02-28 20:29:23.913 -08 000000052 INF: ======================================
17-02-28 20:29:23.914 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:23.915 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:23.916 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:29:23.916 -08 000000099 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:23.916 -08 000000060 INF: ===================FPGA Z Wait===================
17-02-28 20:29:23.916 -08 000000100 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:23.917 -08 000000100 INF: Y Motor: Moving to 14.9293 mm @6.500 mm/sec, started at 64.5776 mm
17-02-28 20:29:23.917 -08 000000100 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:23.917 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:23.917 -08 000000089 INF: ===================Camera TDI, Parallel===================
17-02-28 20:29:23.917 -08 000000099 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:29:23.917 -08 000000099 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:29:23.918 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:29:23.918 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:29:23.920 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:23.920 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:23.920 -08 000000060 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:29:23.922 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:23.922 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:23.977 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:29:23.977 -08 000000100 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:23.977 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:24.039 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:29:24.039 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:24.070 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:24.070 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:24.072 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:24.072 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:24.101 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:29:24.101 -08 000000100 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:24.101 -08 000000100 INF: Y Motor: Set target position to 992925 encoder counts
17-02-28 20:29:24.101 -08 000000100 INF: Y Motor: Xmit s r0xca 992925\r
17-02-28 20:29:24.163 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:29:24.163 -08 000000100 INF: Y Motor: Start the move command
17-02-28 20:29:24.163 -08 000000100 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:24.220 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:24.220 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:24.222 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:24.222 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:24.225 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:29:24.225 -08 000000100 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:29:24.225 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:24.285 -08 000000036 INF: FPGA: Recv ZWAIT 
17-02-28 20:29:24.285 -08 000000060 INF: ======================================
17-02-28 20:29:24.352 -08 000000100 INF: Y Motor: Unshifted Position: 5895691
17-02-28 20:29:24.370 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:24.370 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:24.370 -08 000000074 INF: ===================Camera #0 Frame #5===================
17-02-28 20:29:24.372 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:24.372 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:24.372 -08 000000077 INF: ===================Camera #2 Frame #5===================
17-02-28 20:29:24.402 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:24.526 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:24.535 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:24.535 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:24.535 -08 000000074 INF: ===================Camera #0 Frame #11===================
17-02-28 20:29:24.538 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:24.538 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:24.538 -08 000000077 INF: ===================Camera #2 Frame #11===================
17-02-28 20:29:24.662 -08 000000100 INF: Y Motor: Unshifted Position: 5692242
17-02-28 20:29:24.703 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:29:24.703 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:29:24.703 -08 000000074 INF: ===================Camera #0 Frame #17===================
17-02-28 20:29:24.707 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:29:24.707 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:29:24.707 -08 000000077 INF: ===================Camera #2 Frame #17===================
17-02-28 20:29:24.712 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:24.838 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:24.871 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:29:24.871 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:29:24.871 -08 000000074 INF: ===================Camera #0 Frame #23===================
17-02-28 20:29:24.876 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:29:24.876 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:29:24.876 -08 000000077 INF: ===================Camera #2 Frame #23===================
17-02-28 20:29:24.976 -08 000000100 INF: Y Motor: Unshifted Position: 5488580
17-02-28 20:29:25.026 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:25.041 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 28, frameCount = 29.
17-02-28 20:29:25.041 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 29
17-02-28 20:29:25.041 -08 000000074 INF: ===================Camera #0 Frame #29===================
17-02-28 20:29:25.047 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:29:25.047 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:29:25.047 -08 000000077 INF: ===================Camera #2 Frame #30===================
17-02-28 20:29:25.150 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:25.210 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:29:25.210 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:29:25.210 -08 000000074 INF: ===================Camera #0 Frame #36===================
17-02-28 20:29:25.219 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:29:25.219 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:29:25.219 -08 000000077 INF: ===================Camera #2 Frame #36===================
17-02-28 20:29:25.286 -08 000000100 INF: Y Motor: Unshifted Position: 5286428
17-02-28 20:29:25.336 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:25.383 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:29:25.383 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:29:25.383 -08 000000074 INF: ===================Camera #0 Frame #42===================
17-02-28 20:29:25.390 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:29:25.390 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:29:25.390 -08 000000077 INF: ===================Camera #2 Frame #42===================
17-02-28 20:29:25.460 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:25.552 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:29:25.552 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:29:25.552 -08 000000074 INF: ===================Camera #0 Frame #48===================
17-02-28 20:29:25.559 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:29:25.559 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:29:25.559 -08 000000077 INF: ===================Camera #2 Frame #48===================
17-02-28 20:29:25.599 -08 000000100 INF: Y Motor: Unshifted Position: 5082751
17-02-28 20:29:25.649 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:25.721 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:29:25.721 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:29:25.721 -08 000000074 INF: ===================Camera #0 Frame #54===================
17-02-28 20:29:25.728 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:29:25.728 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:29:25.728 -08 000000077 INF: ===================Camera #2 Frame #55===================
17-02-28 20:29:25.773 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:25.890 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:29:25.890 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:29:25.890 -08 000000074 INF: ===================Camera #0 Frame #61===================
17-02-28 20:29:25.901 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:29:25.901 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:29:25.901 -08 000000077 INF: ===================Camera #2 Frame #61===================
17-02-28 20:29:25.912 -08 000000100 INF: Y Motor: Unshifted Position: 4881259
17-02-28 20:29:25.962 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.063 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:29:26.063 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:29:26.063 -08 000000074 INF: ===================Camera #0 Frame #67===================
17-02-28 20:29:26.071 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:29:26.071 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:29:26.071 -08 000000077 INF: ===================Camera #2 Frame #67===================
17-02-28 20:29:26.084 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.223 -08 000000100 INF: Y Motor: Unshifted Position: 4676938
17-02-28 20:29:26.232 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:29:26.232 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:29:26.232 -08 000000074 INF: ===================Camera #0 Frame #73===================
17-02-28 20:29:26.240 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:29:26.240 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:29:26.240 -08 000000077 INF: ===================Camera #2 Frame #73===================
17-02-28 20:29:26.273 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.398 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.402 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:29:26.402 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:29:26.402 -08 000000074 INF: ===================Camera #0 Frame #79===================
17-02-28 20:29:26.410 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:29:26.410 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:29:26.410 -08 000000077 INF: ===================Camera #2 Frame #80===================
17-02-28 20:29:26.537 -08 000000100 INF: Y Motor: Unshifted Position: 4475428
17-02-28 20:29:26.572 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:29:26.572 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:29:26.572 -08 000000074 INF: ===================Camera #0 Frame #86===================
17-02-28 20:29:26.584 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:29:26.584 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:29:26.584 -08 000000077 INF: ===================Camera #2 Frame #86===================
17-02-28 20:29:26.587 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.711 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.744 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:29:26.744 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:29:26.744 -08 000000074 INF: ===================Camera #0 Frame #92===================
17-02-28 20:29:26.753 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:29:26.753 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:29:26.753 -08 000000077 INF: ===================Camera #2 Frame #92===================
17-02-28 20:29:26.847 -08 000000100 INF: Y Motor: Unshifted Position: 4271762
17-02-28 20:29:26.897 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:26.909 -08 000000083 INF: RunCopyService queue size at 2/28/2017 8:29:26 PM is 2
17-02-28 20:29:26.913 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:29:26.913 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:29:26.913 -08 000000074 INF: ===================Camera #0 Frame #98===================
17-02-28 20:29:26.923 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:29:26.923 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:29:26.926 -08 000000077 INF: ===================Camera #2 Frame #99===================
17-02-28 20:29:27.021 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:27.082 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:29:27.082 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:29:27.082 -08 000000074 INF: ===================Camera #0 Frame #104===================
17-02-28 20:29:27.099 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:29:27.099 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:29:27.099 -08 000000077 INF: ===================Camera #2 Frame #105===================
17-02-28 20:29:27.161 -08 000000100 INF: Y Motor: Unshifted Position: 4068312
17-02-28 20:29:27.211 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:27.252 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:29:27.252 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:29:27.252 -08 000000074 INF: ===================Camera #0 Frame #111===================
17-02-28 20:29:27.269 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:29:27.269 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:29:27.269 -08 000000077 INF: ===================Camera #2 Frame #111===================
17-02-28 20:29:27.334 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:27.425 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:29:27.425 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:29:27.425 -08 000000074 INF: ===================Camera #0 Frame #117===================
17-02-28 20:29:27.439 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:29:27.439 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:29:27.439 -08 000000077 INF: ===================Camera #2 Frame #118===================
17-02-28 20:29:27.470 -08 000000100 INF: Y Motor: Unshifted Position: 3866594
17-02-28 20:29:27.520 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:27.594 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:29:27.594 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:29:27.594 -08 000000074 INF: ===================Camera #0 Frame #123===================
17-02-28 20:29:27.612 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:29:27.612 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:29:27.612 -08 000000077 INF: ===================Camera #2 Frame #124===================
17-02-28 20:29:27.645 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:27.764 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:29:27.764 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:29:27.764 -08 000000074 INF: ===================Camera #0 Frame #130===================
17-02-28 20:29:27.782 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:29:27.782 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:29:27.782 -08 000000077 INF: ===================Camera #2 Frame #130===================
17-02-28 20:29:27.784 -08 000000100 INF: Y Motor: Unshifted Position: 3662488
17-02-28 20:29:27.834 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:27.937 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:29:27.937 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:29:27.937 -08 000000074 INF: ===================Camera #0 Frame #136===================
17-02-28 20:29:27.953 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:29:27.953 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:29:27.953 -08 000000077 INF: ===================Camera #2 Frame #136===================
17-02-28 20:29:27.961 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.096 -08 000000100 INF: Y Motor: Unshifted Position: 3458396
17-02-28 20:29:28.107 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:29:28.107 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:29:28.107 -08 000000074 INF: ===================Camera #0 Frame #142===================
17-02-28 20:29:28.123 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:29:28.123 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:29:28.123 -08 000000077 INF: ===================Camera #2 Frame #143===================
17-02-28 20:29:28.146 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.270 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.277 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:29:28.277 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:29:28.277 -08 000000074 INF: ===================Camera #0 Frame #148===================
17-02-28 20:29:28.297 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:29:28.297 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:29:28.297 -08 000000077 INF: ===================Camera #2 Frame #149===================
17-02-28 20:29:28.407 -08 000000100 INF: Y Motor: Unshifted Position: 3257978
17-02-28 20:29:28.447 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:29:28.447 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:29:28.447 -08 000000074 INF: ===================Camera #0 Frame #155===================
17-02-28 20:29:28.457 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.468 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:29:28.468 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:29:28.468 -08 000000077 INF: ===================Camera #2 Frame #155===================
17-02-28 20:29:28.581 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.620 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:29:28.620 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:29:28.620 -08 000000074 INF: ===================Camera #0 Frame #161===================
17-02-28 20:29:28.638 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:29:28.638 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:29:28.638 -08 000000077 INF: ===================Camera #2 Frame #162===================
17-02-28 20:29:28.720 -08 000000100 INF: Y Motor: Unshifted Position: 3053661
17-02-28 20:29:28.770 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.790 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:29:28.790 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:29:28.790 -08 000000074 INF: ===================Camera #0 Frame #167===================
17-02-28 20:29:28.812 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:29:28.812 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:29:28.812 -08 000000077 INF: ===================Camera #2 Frame #168===================
17-02-28 20:29:28.894 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:28.960 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:29:28.960 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:29:28.960 -08 000000074 INF: ===================Camera #0 Frame #174===================
17-02-28 20:29:28.983 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:29:28.983 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:29:28.983 -08 000000077 INF: ===================Camera #2 Frame #174===================
17-02-28 20:29:29.030 -08 000000100 INF: Y Motor: Unshifted Position: 2852176
17-02-28 20:29:29.080 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:29.133 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:29:29.133 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:29:29.133 -08 000000074 INF: ===================Camera #0 Frame #180===================
17-02-28 20:29:29.154 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:29:29.154 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:29:29.154 -08 000000077 INF: ===================Camera #2 Frame #181===================
17-02-28 20:29:29.205 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:29.303 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:29:29.303 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:29:29.303 -08 000000074 INF: ===================Camera #0 Frame #186===================
17-02-28 20:29:29.328 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:29:29.328 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:29:29.328 -08 000000077 INF: ===================Camera #2 Frame #187===================
17-02-28 20:29:29.344 -08 000000100 INF: Y Motor: Unshifted Position: 2647854
17-02-28 20:29:29.394 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:29.473 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:29:29.473 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:29:29.473 -08 000000074 INF: ===================Camera #0 Frame #192===================
17-02-28 20:29:29.498 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:29:29.498 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:29:29.498 -08 000000077 INF: ===================Camera #2 Frame #193===================
17-02-28 20:29:29.518 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:29.643 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:29:29.643 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:29:29.643 -08 000000074 INF: ===================Camera #0 Frame #199===================
17-02-28 20:29:29.656 -08 000000100 INF: Y Motor: Unshifted Position: 2446362
17-02-28 20:29:29.668 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:29:29.668 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:29:29.668 -08 000000077 INF: ===================Camera #2 Frame #200===================
17-02-28 20:29:29.706 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:29.815 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:29:29.815 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:29:29.815 -08 000000074 INF: ===================Camera #0 Frame #205===================
17-02-28 20:29:29.829 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:29.842 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:29:29.842 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:29:29.842 -08 000000077 INF: ===================Camera #2 Frame #206===================
17-02-28 20:29:29.968 -08 000000100 INF: Y Motor: Unshifted Position: 2241395
17-02-28 20:29:29.985 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:29:29.985 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:29:29.985 -08 000000074 INF: ===================Camera #0 Frame #211===================
17-02-28 20:29:30.013 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:29:30.013 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:29:30.013 -08 000000077 INF: ===================Camera #2 Frame #212===================
17-02-28 20:29:30.018 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:30.141 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:30.155 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:29:30.155 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:29:30.155 -08 000000074 INF: ===================Camera #0 Frame #218===================
17-02-28 20:29:30.183 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:29:30.183 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:29:30.183 -08 000000077 INF: ===================Camera #2 Frame #219===================
17-02-28 20:29:30.280 -08 000000100 INF: Y Motor: Unshifted Position: 2039245
17-02-28 20:29:30.328 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:29:30.328 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:29:30.328 -08 000000074 INF: ===================Camera #0 Frame #224===================
17-02-28 20:29:30.330 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:30.357 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:29:30.357 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:29:30.357 -08 000000077 INF: ===================Camera #2 Frame #225===================
17-02-28 20:29:30.454 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:30.498 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:29:30.498 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:29:30.498 -08 000000074 INF: ===================Camera #0 Frame #230===================
17-02-28 20:29:30.526 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:29:30.526 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:29:30.526 -08 000000077 INF: ===================Camera #2 Frame #231===================
17-02-28 20:29:30.590 -08 000000100 INF: Y Motor: Unshifted Position: 1837526
17-02-28 20:29:30.640 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:30.668 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:29:30.668 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:29:30.668 -08 000000074 INF: ===================Camera #0 Frame #236===================
17-02-28 20:29:30.697 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:29:30.697 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:29:30.697 -08 000000077 INF: ===================Camera #2 Frame #238===================
17-02-28 20:29:30.765 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:30.838 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:29:30.838 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:29:30.838 -08 000000074 INF: ===================Camera #0 Frame #243===================
17-02-28 20:29:30.872 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:29:30.872 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:29:30.872 -08 000000077 INF: ===================Camera #2 Frame #244===================
17-02-28 20:29:30.904 -08 000000100 INF: Y Motor: Unshifted Position: 1633419
17-02-28 20:29:30.954 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.012 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:29:31.012 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:29:31.012 -08 000000074 INF: ===================Camera #0 Frame #249===================
17-02-28 20:29:31.043 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:29:31.043 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:29:31.043 -08 000000077 INF: ===================Camera #2 Frame #250===================
17-02-28 20:29:31.077 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.182 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:29:31.182 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:29:31.182 -08 000000074 INF: ===================Camera #0 Frame #255===================
17-02-28 20:29:31.213 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:29:31.213 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:29:31.213 -08 000000077 INF: ===================Camera #2 Frame #257===================
17-02-28 20:29:31.216 -08 000000100 INF: Y Motor: Unshifted Position: 1430400
17-02-28 20:29:31.266 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.352 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:29:31.352 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:29:31.352 -08 000000074 INF: ===================Camera #0 Frame #262===================
17-02-28 20:29:31.386 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:29:31.386 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:29:31.386 -08 000000077 INF: ===================Camera #2 Frame #263===================
17-02-28 20:29:31.390 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.526 -08 000000100 INF: Y Motor: Unshifted Position: 1227588
17-02-28 20:29:31.526 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:29:31.526 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:29:31.526 -08 000000074 INF: ===================Camera #0 Frame #268===================
17-02-28 20:29:31.556 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:29:31.556 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:29:31.556 -08 000000077 INF: ===================Camera #2 Frame #269===================
17-02-28 20:29:31.576 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.649 -08 000000078 INF: FPGA: Recv TDIYWAIT
17-02-28 20:29:31.649 -08 000000099 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:31.651 -08 000000099 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:29:31.652 -08 000000080 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:29:31.652 -08 000000082 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:29:31.652 -08 000000080 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:29:31.652 -08 000000080 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:29:31.652 -08 000000080 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:29:31.652 -08 000000080 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:29:31.652 -08 000000082 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:29:31.652 -08 000000082 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:29:31.652 -08 000000082 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:29:31.653 -08 000000082 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:29:31.696 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:29:31.696 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:29:31.696 -08 000000074 INF: ===================Camera #0 Frame #272===================
17-02-28 20:29:31.701 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.710 -08 000000074 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:29:31.710 -08 000000074 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:31.840 -08 000000100 INF: Y Motor: Unshifted Position: 1024579
17-02-28 20:29:31.877 -08 000000074 INF: Camera #0 ReleaseBuffer
17-02-28 20:29:31.877 -08 000000077 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:29:31.877 -08 000000077 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:29:31.877 -08 000000077 INF: ===================Camera #2 Frame #272===================
17-02-28 20:29:31.877 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:29:31.886 -08 000000077 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:29:31.887 -08 000000077 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:31.890 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:31.910 -08 000000074 INF: ======================================
17-02-28 20:29:32.023 -08 000000032 INF: FPGA: Recv EX1MV
17-02-28 20:29:32.023 -08 000000032 INF: FPGA: Recv EX2MV
17-02-28 20:29:32.023 -08 000000082 INF: Excitation Filter 2: Moved 107 steps in 370.8821 ms
17-02-28 20:29:32.023 -08 000000080 INF: Excitation Filter 1: Moved 107 steps in 371.0893 ms
17-02-28 20:29:32.023 -08 000000080 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.1942 ms
17-02-28 20:29:32.023 -08 000000080 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.2652 ms
17-02-28 20:29:32.023 -08 000000082 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 370.9882 ms
17-02-28 20:29:32.023 -08 000000082 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 371.3672 ms
17-02-28 20:29:32.023 -08 000000080 INF: ======================================
17-02-28 20:29:32.023 -08 000000082 INF: ======================================
17-02-28 20:29:32.024 -08 000000099 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:32.025 -08 000000100 INF: Y Motor: Unshifted Position: 992924
17-02-28 20:29:32.025 -08 000000100 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:32.025 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:32.026 -08 000000099 INF: ======================================
17-02-28 20:29:32.085 -08 000000077 INF: Camera #2 ReleaseBuffer
17-02-28 20:29:32.085 -08 000000077 INF: ===================Camera TDI===================
17-02-28 20:29:32.090 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:29:32.090 -08 000000100 INF: Y Motor: Moved to 14.9292 after 7864 ms
17-02-28 20:29:32.090 -08 000000100 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:32.122 -08 000000077 INF: ======================================
17-02-28 20:29:32.123 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:29:32.124 -08 000000089 INF: ======================================
17-02-28 20:29:32.153 -08 000000100 INF: Y Motor: Recv v 4097\r
17-02-28 20:29:32.153 -08 000000100 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:32.153 -08 000000100 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:32.214 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:29:32.214 -08 000000100 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:32.214 -08 000000100 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:32.276 -08 000000100 INF: Y Motor: Recv v 134217728\r
17-02-28 20:29:32.276 -08 000000100 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:29:32.276 -08 000000100 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:32.276 -08 000000100 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:32.338 -08 000000100 INF: Y Motor: Recv v 0\r
17-02-28 20:29:32.338 -08 000000100 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:32.338 -08 000000100 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:32.338 -08 000000100 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:32.400 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:29:32.400 -08 000000100 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:32.400 -08 000000100 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:32.462 -08 000000100 INF: Y Motor: Recv ok\r
17-02-28 20:29:32.462 -08 000000100 INF: ======================================
17-02-28 20:29:32.463 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:32.464 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:32.465 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:32.465 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:29:32.526 -08 000000032 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:29:32.526 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:32.585 -08 000000030 INF: FPGA: Recv TDIYERD 1492925
17-02-28 20:29:32.585 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:29:32.647 -08 000000087 INF: FPGA: Recv ZADCR 21687
17-02-28 20:29:32.647 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.083. Y moved -48.539 mm
17-02-28 20:29:32.647 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:29:32.712 -08 000000100 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:29:32.712 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:29:32.712 -08 000000042 INF: TDIScan finished after 11834.8809 ms
17-02-28 20:29:32.712 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:29:32.712 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:29:32.714 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:32.746 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.498 um
17-02-28 20:29:32.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:32.748 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:29:32.774 -08 000000071 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:29:32.774 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:32.775 -08 000000038 INF: ===================Dither Clean Up Command===================
17-02-28 20:29:32.775 -08 000000028 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:29:32.775 -08 000000088 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:29:32.775 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:29:32.775 -08 000000088 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:32.776 -08 000000088 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:32.776 -08 000000028 INF: ======================================
17-02-28 20:29:32.776 -08 000000047 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:29:32.776 -08 000000047 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:29:32.776 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:29:32.776 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:32.777 -08 000000078 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:29:32.779 -08 000000030 INF: ===================LFT:Extracting coords===================
17-02-28 20:29:32.804 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:32.805 -08 000000030 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:29:32.806 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:29:32.806 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:29:32.806 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:29:32.806 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:29:32.806 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:32.806 -08 000000052 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:32.806 -08 000000100 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:32.807 -08 000000076 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:32.837 -08 000000095 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:32.837 -08 000000095 INF: FPGA: Recv ZSEL 
17-02-28 20:29:32.837 -08 000000078 INF: FPGA: Xmit ZDACW 26406\n
17-02-28 20:29:32.837 -08 000000047 INF: ======================================
17-02-28 20:29:32.841 -08 000000088 INF: Y Motor: Recv ok\r
17-02-28 20:29:32.841 -08 000000088 INF: ======================================
17-02-28 20:29:32.883 -08 000000098 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:32.883 -08 000000052 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:32.883 -08 000000100 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:32.883 -08 000000076 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:32.899 -08 000000044 INF: FPGA: Recv ZDACW 
17-02-28 20:29:32.900 -08 000000078 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:29:32.900 -08 000000078 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:29:32.961 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:29:32.961 -08 000000078 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:29:32.962 -08 000000078 INF: ======================================
17-02-28 20:29:33.035 -08 000000098 INF: LFT found best fwhm score 2.0158 in 152 ms
17-02-28 20:29:33.035 -08 000000052 INF: LFT found best fwhm score 2.000109 in 152 ms
17-02-28 20:29:33.035 -08 000000098 INF: LFT found good score at index 7865 with fwhm value 2.0158. Next cycle, cycle 4 starting Z position for bottom surface is at -0.079 mm FC:B, C:3,L:6,B
17-02-28 20:29:33.035 -08 000000052 INF: LFT found good score at index 7333 with fwhm value 2.000109. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:6,B
17-02-28 20:29:33.036 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:29:33.036 -08 000000052 INF: ===================LookupFocusTracking===================
17-02-28 20:29:33.036 -08 000000100 INF: LFT found best fwhm score 2.000045 in 153 ms
17-02-28 20:29:33.036 -08 000000100 INF: LFT found good score at index 6605 with fwhm value 2.000045. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:6,B
17-02-28 20:29:33.036 -08 000000076 INF: LFT found best fwhm score 2.001069 in 153 ms
17-02-28 20:29:33.036 -08 000000076 INF: LFT found good score at index 7357 with fwhm value 2.001069. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:6,B
17-02-28 20:29:33.036 -08 000000098 INF: ======================================
17-02-28 20:29:33.036 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:29:33.036 -08 000000052 INF: ======================================
17-02-28 20:29:33.036 -08 000000076 INF: ===================LookupFocusTracking===================
17-02-28 20:29:33.036 -08 000000100 INF: ======================================
17-02-28 20:29:33.036 -08 000000076 INF: ======================================
17-02-28 20:29:33.037 -08 000000030 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:33.038 -08 000000030 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:6,B
17-02-28 20:29:33.038 -08 000000030 INF: ======================================
17-02-28 20:29:33.039 -08 000000038 INF: ======================================
17-02-28 20:29:33.040 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:29:33.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:29:33.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:29:33.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:29:33.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:29:33.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:29:33.043 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:29:33.043 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:29:33.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:29:33.044 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 1 - X = 82.45318 Y = 39.78827===================
17-02-28 20:29:33.067 -08 000000042 INF: Waited 24 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 1, buffer wait time 0
17-02-28 20:29:33.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:33.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:29:33.067 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:29:33.068 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:29:33.068 -08 000000042 INF: Transformed XStagePosition from 83.56118 mm to 83.5377201139927 mm.
17-02-28 20:29:33.080 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5768978014831 mm.
17-02-28 20:29:33.080 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3768978014831 mm.
17-02-28 20:29:33.080 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.467647801483 mm.
17-02-28 20:29:33.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:29:33.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:33.083 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -100.7 um, section = F_1
17-02-28 20:29:33.109 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:33.110 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:33.151 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":6,"Tile":2110,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF255","HCSMMF212","HCSMMF217"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.248 -08 000000073 INF: ===================MoveEmissionFilters===================
17-02-28 20:29:33.248 -08 000000102 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:33.249 -08 000000102 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:29:33.250 -08 000000102 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:29:33.250 -08 000000102 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:33.250 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:33.251 -08 000000102 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:29:33.251 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:33.251 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:33.252 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:33.252 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:33.253 -08 000000059 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:29:33.253 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:33.253 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:29:33.253 -08 000000059 INF: ======================================
17-02-28 20:29:33.253 -08 000000074 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:29:33.253 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:33.253 -08 000000074 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:29:33.254 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:33.254 -08 000000074 INF: ======================================
17-02-28 20:29:33.254 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:33.255 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:33.255 -08 000000059 INF: ===================Camera Arm TDI===================
17-02-28 20:29:33.255 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:29:33.255 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:29:33.256 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:33.256 -08 000000100 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:29:33.256 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:29:33.256 -08 000000074 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:29:33.256 -08 000000059 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:33.256 -08 000000033 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:29:33.256 -08 000000062 INF: ===================Move X,Y, Parallel===================
17-02-28 20:29:33.256 -08 000000074 INF: ======================================
17-02-28 20:29:33.256 -08 000000108 INF: ======================================
17-02-28 20:29:33.257 -08 000000059 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:33.257 -08 000000050 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:29:33.257 -08 000000028 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:29:33.257 -08 000000100 INF: ======================================
17-02-28 20:29:33.258 -08 000000050 INF: ======================================
17-02-28 20:29:33.258 -08 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:29:33.258 -08 000000028 INF: ======================================
17-02-28 20:29:33.258 -08 000000074 INF: ===================Move X Motor without settling===================
17-02-28 20:29:33.258 -08 000000084 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:33.258 -08 000000084 INF: Y Motor: Moving to 64.5769 mm @25.000 mm/sec, started at 14.9292 mm
17-02-28 20:29:33.258 -08 000000089 INF: ======================================
17-02-28 20:29:33.258 -08 000000084 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:33.258 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:33.259 -08 000000038 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:33.259 -08 000000106 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:33.260 -08 000000033 INF: ======================================
17-02-28 20:29:33.261 -08 000000038 INF: ======================================
17-02-28 20:29:33.261 -08 000000106 INF: ======================================
17-02-28 20:29:33.261 -08 000000074 INF: X Motor: Xmit PR VM\n
17-02-28 20:29:33.262 -08 000000051 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:33.263 -08 000000051 INF: ======================================
17-02-28 20:29:33.264 -08 000000073 INF: ======================================
17-02-28 20:29:33.271 -08 000000095 INF: FPGA: Recv ZSEL 
17-02-28 20:29:33.272 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:33.272 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:29:33.283 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":6,"Tile":2112,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF231","HCSMMF279","HCSMMF203"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.285 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":6,"Tile":2104,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF270","HCSMMF272","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.288 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":6,"Tile":2117,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF220","HCSMMF238","HCSMMF225","HCSMMF278"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.288 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":6,"Tile":2116,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF227","HCSMMF194","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.290 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":6,"Tile":2111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF244","HCSMMF184","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.291 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":6,"Tile":2115,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF285","HCSMMF281","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.292 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":6,"Tile":2108,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF178","HCSMMF234","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.292 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":6,"Tile":2109,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF202","HCSMMF282","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.293 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":6,"Tile":2101,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF226","HCSMMF192","HCSMMF276"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.294 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":6,"Tile":2120,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF252","HCSMMF183","HCSMMF262","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.294 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":6,"Tile":2118,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF201","HCSMMF232","HCSMMF277"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.295 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":6,"Tile":2113,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF224","HCSMMF258","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.296 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":6,"Tile":2114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF236","HCSMMF242","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.296 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":6,"Tile":2121,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF198","HCSMMF186","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.297 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":6,"Tile":2107,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF264","HCSMMF214","HCSMMF221","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.298 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":6,"Tile":2105,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF261","HCSMMF263","HCSMMF283"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.299 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":6,"Tile":2102,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF191","HCSMMF239","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.299 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":6,"Tile":2123,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF179","HCSMMF228","HCSMMF250","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.300 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":6,"Tile":2126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF205","HCSMMF269","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.301 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":6,"Tile":2106,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF222","HCSMMF189","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.302 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":6,"Tile":2103,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF275","HCSMMF256","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.302 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":6,"Tile":2119,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF254","HCSMMF223","HCSMMF200","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.303 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":6,"Tile":2128,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF265","HCSMMF209","HCSMMF197","HCSMMF241"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.304 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":6,"Tile":2124,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF249","HCSMMF180","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.305 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":6,"Tile":2122,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF195","HCSMMF215","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.306 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":6,"Tile":2127,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF235","HCSMMF216","HCSMMF199"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.307 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":6,"Tile":2125,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF266","HCSMMF213","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:33.309 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.315 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:29:33.336 -08 000000052 INF: FPGA: Recv TDIBB
17-02-28 20:29:33.336 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:33.338 -08 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:29:33.338 -08 000000074 INF: X Motor: Xmit PR VI\n
17-02-28 20:29:33.338 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:29:33.338 -08 000000084 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:33.338 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:33.338 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:29:33.338 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:33.340 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:29:33.340 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:29:33.340 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:29:33.398 -08 000000061 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:33.398 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.398 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:29:33.398 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:33.400 -08 000000074 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:29:33.400 -08 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:29:33.400 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:29:33.400 -08 000000074 INF: X Motor: Moving to 83.5377 mm @15.000 mm/sec, started at 82.4399 mm
17-02-28 20:29:33.400 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:33.400 -08 000000074 INF: X Motor: Xmit MA 10051\n
17-02-28 20:29:33.400 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:29:33.400 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:33.402 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:29:33.402 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:29:33.402 -08 000000090 INF: Z Motor: Arming to move to -0.0607 mm
17-02-28 20:29:33.402 -08 000000090 INF: FPGA: Xmit ZYT 6437690 4\n
17-02-28 20:29:33.434 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.440 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:29:33.460 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:29:33.460 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492924 enc / 14.929 mm / ) = 6437690 enc / 64.377 mm
17-02-28 20:29:33.460 -08 000000090 INF: FPGA: Xmit ZARM 15920\n
17-02-28 20:29:33.462 -08 000000074 INF: X Motor: Recv MA 10051\r\n>
17-02-28 20:29:33.462 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:29:33.462 -08 000000084 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:33.462 -08 000000074 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:29:33.462 -08 000000084 INF: Y Motor: Set target position to 5957690 encoder counts
17-02-28 20:29:33.462 -08 000000084 INF: Y Motor: Xmit s r0xca 5957690\r
17-02-28 20:29:33.522 -08 000000077 INF: FPGA: Recv ZARM
17-02-28 20:29:33.522 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9572 ms
17-02-28 20:29:33.522 -08 000000090 INF: Z Motor: ArmAbsStepped took 119.6949 ms
17-02-28 20:29:33.522 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:33.524 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:29:33.524 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:29:33.524 -08 000000084 INF: Y Motor: Start the move command
17-02-28 20:29:33.524 -08 000000084 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:33.524 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.525 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:29:33.526 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:29:33.527 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:29:33.527 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:29:33.529 -08 000000090 INF: ======================================
17-02-28 20:29:33.530 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:29:33.586 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:29:33.586 -08 000000084 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:29:33.586 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:33.647 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.652 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:29:33.710 -08 000000084 INF: Y Motor: Unshifted Position: 1074558
17-02-28 20:29:33.750 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:33.760 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:33.850 -08 000000059 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:29:33.850 -08 000000059 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:29:33.850 -08 000000059 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:33.865 -08 000000059 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:33.867 -08 000000059 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:33.887 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.024 -08 000000084 INF: Y Motor: Unshifted Position: 1784580
17-02-28 20:29:34.065 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:29:34.074 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.085 -08 000000074 INF: X Motor: Xmit PR ER\n
17-02-28 20:29:34.147 -08 000000074 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:29:34.147 -08 000000074 INF: X Motor: Moved to 83.5386 after 685 ms
17-02-28 20:29:34.147 -08 000000074 INF: ======================================
17-02-28 20:29:34.197 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.336 -08 000000084 INF: Y Motor: Unshifted Position: 2565446
17-02-28 20:29:34.386 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.465 -08 000000059 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:29:34.465 -08 000000059 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:29:34.465 -08 000000059 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:34.480 -08 000000059 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:34.482 -08 000000059 INF: ===================Camera Arm TDI===================
17-02-28 20:29:34.483 -08 000000059 INF: ======================================
17-02-28 20:29:34.484 -08 000000102 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:34.486 -08 000000102 INF: ======================================
17-02-28 20:29:34.510 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.646 -08 000000084 INF: Y Motor: Unshifted Position: 3340389
17-02-28 20:29:34.696 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.821 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:34.962 -08 000000084 INF: Y Motor: Unshifted Position: 4126298
17-02-28 20:29:35.012 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:35.133 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:35.272 -08 000000084 INF: Y Motor: Unshifted Position: 4906241
17-02-28 20:29:35.322 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:35.446 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:35.582 -08 000000084 INF: Y Motor: Unshifted Position: 5680795
17-02-28 20:29:35.632 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:35.759 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:35.896 -08 000000084 INF: Y Motor: Unshifted Position: 5957692
17-02-28 20:29:35.896 -08 000000084 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:35.896 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:35.959 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:29:35.959 -08 000000084 INF: Y Motor: Moved to 64.5769 after 2373 ms
17-02-28 20:29:35.959 -08 000000084 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:36.019 -08 000000084 INF: Y Motor: Recv v 4096\r
17-02-28 20:29:36.019 -08 000000084 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:36.019 -08 000000084 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:36.081 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:29:36.081 -08 000000084 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:36.081 -08 000000084 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:36.147 -08 000000084 INF: Y Motor: Recv v 402653184\r
17-02-28 20:29:36.147 -08 000000084 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:29:36.147 -08 000000084 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:36.147 -08 000000084 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:36.208 -08 000000084 INF: Y Motor: Recv v 0\r
17-02-28 20:29:36.208 -08 000000084 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:36.208 -08 000000084 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:36.208 -08 000000084 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:36.270 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:29:36.270 -08 000000084 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:36.270 -08 000000084 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:36.333 -08 000000084 INF: Y Motor: Recv ok\r
17-02-28 20:29:36.333 -08 000000084 INF: ======================================
17-02-28 20:29:36.334 -08 000000062 INF: ===================Move X,Y===================
17-02-28 20:29:36.335 -08 000000062 INF: ======================================
17-02-28 20:29:36.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:36.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:36.337 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:29:36.337 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:29:36.395 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:36.395 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:29:36.455 -08 000000047 INF: FPGA: Recv ZFREQCL
17-02-28 20:29:36.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:29:36.455 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:36.456 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:36.517 -08 000000106 INF: FPGA: Recv TDIYERD 6457691
17-02-28 20:29:36.517 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457691 counts (64.577 mm)
17-02-28 20:29:36.517 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:36.518 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:36.519 -08 000000098 INF: ===================Set YMotor gains for scans===================
17-02-28 20:29:36.519 -08 000000090 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:36.519 -08 000000098 INF: ======================================
17-02-28 20:29:36.520 -08 000000090 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:36.520 -08 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:29:36.520 -08 000000090 INF: FPGA: Xmit TDIYPOS 6346765\n
17-02-28 20:29:36.579 -08 000000023 INF: FPGA: Recv TDIYPOS
17-02-28 20:29:36.579 -08 000000090 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:36.581 -08 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:29:36.581 -08 000000090 INF: FPGA: Xmit TDIYARM3 139264 6437690 1 1\n
17-02-28 20:29:36.646 -08 000000102 INF: FPGA: Recv TDIYARM3
17-02-28 20:29:36.647 -08 000000090 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:36.648 -08 000000090 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:36.649 -08 000000090 INF: ======================================
17-02-28 20:29:36.650 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:36.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:36.651 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:36.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:36.652 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:36.653 -08 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:29:36.653 -08 000000106 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:29:36.653 -08 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:29:36.653 -08 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:29:36.653 -08 000000038 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:29:36.653 -08 000000106 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:29:36.653 -08 000000038 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:29:36.653 -08 000000106 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:29:36.653 -08 000000106 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:29:36.656 -08 000000106 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:29:37.019 -08 000000077 INF: FPGA: Recv EX2MV
17-02-28 20:29:37.019 -08 000000038 INF: Excitation Filter 2: Moved -107 steps in 365.529 ms
17-02-28 20:29:37.019 -08 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.7095 ms
17-02-28 20:29:37.019 -08 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.7943 ms
17-02-28 20:29:37.019 -08 000000038 INF: ======================================
17-02-28 20:29:37.079 -08 000000108 INF: FPGA: Recv EX1MV
17-02-28 20:29:37.079 -08 000000106 INF: Excitation Filter 1: Moved -107 steps in 425.8644 ms
17-02-28 20:29:37.079 -08 000000106 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 426.042 ms
17-02-28 20:29:37.079 -08 000000106 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 426.1328 ms
17-02-28 20:29:37.080 -08 000000106 INF: ======================================
17-02-28 20:29:37.082 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:37.083 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:37.084 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:29:37.085 -08 000000088 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:37.085 -08 000000062 INF: ===================FPGA Z Wait===================
17-02-28 20:29:37.085 -08 000000091 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:37.085 -08 000000091 INF: Y Motor: Moving to 14.9286 mm @6.500 mm/sec, started at 64.5769 mm
17-02-28 20:29:37.085 -08 000000091 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:37.085 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:37.086 -08 000000090 INF: ===================Camera TDI, Parallel===================
17-02-28 20:29:37.086 -08 000000088 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:29:37.086 -08 000000088 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:29:37.086 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:29:37.087 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:29:37.088 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:37.088 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:37.089 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:37.089 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:37.090 -08 000000062 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:29:37.145 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:29:37.145 -08 000000091 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:37.145 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:37.206 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:29:37.206 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:37.238 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:37.238 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:37.240 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:37.240 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:37.268 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:29:37.268 -08 000000091 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:37.268 -08 000000091 INF: Y Motor: Set target position to 992856 encoder counts
17-02-28 20:29:37.268 -08 000000091 INF: Y Motor: Xmit s r0xca 992856\r
17-02-28 20:29:37.330 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:29:37.330 -08 000000091 INF: Y Motor: Start the move command
17-02-28 20:29:37.330 -08 000000091 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:37.388 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:37.388 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:37.390 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:37.390 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:37.395 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:29:37.395 -08 000000091 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:29:37.395 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:37.455 -08 000000037 INF: FPGA: Recv ZWAIT 
17-02-28 20:29:37.455 -08 000000062 INF: ======================================
17-02-28 20:29:37.519 -08 000000091 INF: Y Motor: Unshifted Position: 5893887
17-02-28 20:29:37.538 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:37.538 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:37.538 -08 000000098 INF: ===================Camera #0 Frame #5===================
17-02-28 20:29:37.540 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:37.540 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:37.540 -08 000000089 INF: ===================Camera #2 Frame #5===================
17-02-28 20:29:37.569 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:37.693 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:37.711 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:37.711 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:37.711 -08 000000098 INF: ===================Camera #0 Frame #11===================
17-02-28 20:29:37.714 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:37.714 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:37.714 -08 000000089 INF: ===================Camera #2 Frame #11===================
17-02-28 20:29:37.829 -08 000000091 INF: Y Motor: Unshifted Position: 5692389
17-02-28 20:29:37.879 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:37.892 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:29:37.892 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:29:37.892 -08 000000089 INF: ===================Camera #2 Frame #18===================
17-02-28 20:29:37.894 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 17, frameCount = 18.
17-02-28 20:29:37.894 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 18
17-02-28 20:29:37.894 -08 000000098 INF: ===================Camera #0 Frame #18===================
17-02-28 20:29:38.014 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.065 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:29:38.065 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:29:38.065 -08 000000098 INF: ===================Camera #0 Frame #24===================
17-02-28 20:29:38.073 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:29:38.073 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:29:38.073 -08 000000089 INF: ===================Camera #2 Frame #24===================
17-02-28 20:29:38.142 -08 000000091 INF: Y Motor: Unshifted Position: 5488726
17-02-28 20:29:38.192 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.241 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:29:38.241 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:29:38.241 -08 000000098 INF: ===================Camera #0 Frame #31===================
17-02-28 20:29:38.252 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:29:38.252 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:29:38.252 -08 000000089 INF: ===================Camera #2 Frame #31===================
17-02-28 20:29:38.316 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.413 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:29:38.413 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:29:38.413 -08 000000098 INF: ===================Camera #0 Frame #37===================
17-02-28 20:29:38.424 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:29:38.424 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:29:38.424 -08 000000089 INF: ===================Camera #2 Frame #37===================
17-02-28 20:29:38.455 -08 000000091 INF: Y Motor: Unshifted Position: 5285058
17-02-28 20:29:38.505 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.581 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:29:38.581 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:29:38.581 -08 000000098 INF: ===================Camera #0 Frame #43===================
17-02-28 20:29:38.597 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:29:38.597 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:29:38.597 -08 000000089 INF: ===================Camera #2 Frame #44===================
17-02-28 20:29:38.629 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.749 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:29:38.749 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:29:38.749 -08 000000098 INF: ===================Camera #0 Frame #49===================
17-02-28 20:29:38.765 -08 000000091 INF: Y Motor: Unshifted Position: 5083546
17-02-28 20:29:38.779 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:29:38.779 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:29:38.779 -08 000000089 INF: ===================Camera #2 Frame #50===================
17-02-28 20:29:38.815 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.919 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:29:38.919 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:29:38.919 -08 000000098 INF: ===================Camera #0 Frame #55===================
17-02-28 20:29:38.942 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:38.949 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 56, frameCount = 57.
17-02-28 20:29:38.949 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 57
17-02-28 20:29:38.949 -08 000000089 INF: ===================Camera #2 Frame #57===================
17-02-28 20:29:39.078 -08 000000091 INF: Y Motor: Unshifted Position: 4879886
17-02-28 20:29:39.097 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 61, frameCount = 62.
17-02-28 20:29:39.097 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 62
17-02-28 20:29:39.097 -08 000000098 INF: ===================Camera #0 Frame #62===================
17-02-28 20:29:39.128 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:39.131 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:29:39.131 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:29:39.131 -08 000000089 INF: ===================Camera #2 Frame #63===================
17-02-28 20:29:39.254 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:39.268 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:29:39.268 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:29:39.268 -08 000000098 INF: ===================Camera #0 Frame #68===================
17-02-28 20:29:39.309 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 69, frameCount = 70.
17-02-28 20:29:39.309 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 70
17-02-28 20:29:39.309 -08 000000089 INF: ===================Camera #2 Frame #70===================
17-02-28 20:29:39.391 -08 000000091 INF: Y Motor: Unshifted Position: 4677090
17-02-28 20:29:39.441 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:39.441 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 74, frameCount = 75.
17-02-28 20:29:39.441 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 75
17-02-28 20:29:39.441 -08 000000098 INF: ===================Camera #0 Frame #75===================
17-02-28 20:29:39.492 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 76, frameCount = 77.
17-02-28 20:29:39.492 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 77
17-02-28 20:29:39.492 -08 000000089 INF: ===================Camera #2 Frame #77===================
17-02-28 20:29:39.564 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:39.614 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 80, frameCount = 81.
17-02-28 20:29:39.614 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 81
17-02-28 20:29:39.614 -08 000000098 INF: ===================Camera #0 Frame #81===================
17-02-28 20:29:39.675 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 82, frameCount = 83.
17-02-28 20:29:39.675 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 83
17-02-28 20:29:39.675 -08 000000089 INF: ===================Camera #2 Frame #83===================
17-02-28 20:29:39.703 -08 000000091 INF: Y Motor: Unshifted Position: 4473408
17-02-28 20:29:39.753 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:39.791 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:29:39.791 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:29:39.791 -08 000000098 INF: ===================Camera #0 Frame #88===================
17-02-28 20:29:39.845 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:29:39.845 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:29:39.845 -08 000000089 INF: ===================Camera #2 Frame #90===================
17-02-28 20:29:39.877 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:39.962 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:29:39.962 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:29:39.962 -08 000000098 INF: ===================Camera #0 Frame #94===================
17-02-28 20:29:40.013 -08 000000091 INF: Y Motor: Unshifted Position: 4271910
17-02-28 20:29:40.017 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 95, frameCount = 96.
17-02-28 20:29:40.017 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 96
17-02-28 20:29:40.017 -08 000000089 INF: ===================Camera #2 Frame #96===================
17-02-28 20:29:40.063 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:40.131 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 99, frameCount = 100.
17-02-28 20:29:40.131 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 100
17-02-28 20:29:40.131 -08 000000098 INF: ===================Camera #0 Frame #100===================
17-02-28 20:29:40.186 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 101, frameCount = 102.
17-02-28 20:29:40.186 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 102
17-02-28 20:29:40.186 -08 000000089 INF: ===================Camera #2 Frame #102===================
17-02-28 20:29:40.188 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:40.300 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 105, frameCount = 106.
17-02-28 20:29:40.300 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 106
17-02-28 20:29:40.300 -08 000000098 INF: ===================Camera #0 Frame #106===================
17-02-28 20:29:40.327 -08 000000091 INF: Y Motor: Unshifted Position: 4067588
17-02-28 20:29:40.357 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 107, frameCount = 108.
17-02-28 20:29:40.358 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 108
17-02-28 20:29:40.358 -08 000000089 INF: ===================Camera #2 Frame #108===================
17-02-28 20:29:40.377 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:40.468 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:29:40.468 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:29:40.468 -08 000000098 INF: ===================Camera #0 Frame #113===================
17-02-28 20:29:40.501 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:40.527 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:29:40.527 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:29:40.527 -08 000000089 INF: ===================Camera #2 Frame #115===================
17-02-28 20:29:40.637 -08 000000091 INF: Y Motor: Unshifted Position: 3864791
17-02-28 20:29:40.639 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:29:40.639 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:29:40.639 -08 000000098 INF: ===================Camera #0 Frame #119===================
17-02-28 20:29:40.687 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:40.700 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 120, frameCount = 121.
17-02-28 20:29:40.700 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 121
17-02-28 20:29:40.700 -08 000000089 INF: ===================Camera #2 Frame #121===================
17-02-28 20:29:40.808 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 124, frameCount = 125.
17-02-28 20:29:40.808 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 125
17-02-28 20:29:40.808 -08 000000098 INF: ===================Camera #0 Frame #125===================
17-02-28 20:29:40.815 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:40.869 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 126, frameCount = 127.
17-02-28 20:29:40.869 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 127
17-02-28 20:29:40.869 -08 000000089 INF: ===================Camera #2 Frame #127===================
17-02-28 20:29:40.950 -08 000000091 INF: Y Motor: Unshifted Position: 3662419
17-02-28 20:29:40.976 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:29:40.976 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:29:40.976 -08 000000098 INF: ===================Camera #0 Frame #131===================
17-02-28 20:29:41.000 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.038 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 132, frameCount = 133.
17-02-28 20:29:41.038 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 133
17-02-28 20:29:41.038 -08 000000089 INF: ===================Camera #2 Frame #133===================
17-02-28 20:29:41.124 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.144 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:29:41.144 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:29:41.144 -08 000000098 INF: ===================Camera #0 Frame #137===================
17-02-28 20:29:41.208 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:29:41.208 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:29:41.208 -08 000000089 INF: ===================Camera #2 Frame #140===================
17-02-28 20:29:41.265 -08 000000091 INF: Y Motor: Unshifted Position: 3458974
17-02-28 20:29:41.312 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 143, frameCount = 144.
17-02-28 20:29:41.312 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 144
17-02-28 20:29:41.312 -08 000000098 INF: ===================Camera #0 Frame #144===================
17-02-28 20:29:41.315 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.380 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 145, frameCount = 146.
17-02-28 20:29:41.380 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 146
17-02-28 20:29:41.380 -08 000000089 INF: ===================Camera #2 Frame #146===================
17-02-28 20:29:41.437 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.483 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 149, frameCount = 150.
17-02-28 20:29:41.483 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 150
17-02-28 20:29:41.483 -08 000000098 INF: ===================Camera #0 Frame #150===================
17-02-28 20:29:41.549 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 151, frameCount = 152.
17-02-28 20:29:41.549 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 152
17-02-28 20:29:41.549 -08 000000089 INF: ===================Camera #2 Frame #152===================
17-02-28 20:29:41.573 -08 000000091 INF: Y Motor: Unshifted Position: 3257261
17-02-28 20:29:41.623 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.651 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:29:41.651 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:29:41.651 -08 000000098 INF: ===================Camera #0 Frame #156===================
17-02-28 20:29:41.718 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:29:41.718 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:29:41.718 -08 000000089 INF: ===================Camera #2 Frame #159===================
17-02-28 20:29:41.750 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.819 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:29:41.819 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:29:41.819 -08 000000098 INF: ===================Camera #0 Frame #162===================
17-02-28 20:29:41.886 -08 000000091 INF: Y Motor: Unshifted Position: 3053813
17-02-28 20:29:41.890 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:29:41.890 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:29:41.890 -08 000000089 INF: ===================Camera #2 Frame #165===================
17-02-28 20:29:41.936 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:41.987 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:29:41.987 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:29:41.987 -08 000000098 INF: ===================Camera #0 Frame #168===================
17-02-28 20:29:42.059 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:29:42.059 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:29:42.059 -08 000000089 INF: ===================Camera #2 Frame #171===================
17-02-28 20:29:42.060 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.155 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:29:42.155 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:29:42.155 -08 000000098 INF: ===================Camera #0 Frame #175===================
17-02-28 20:29:42.197 -08 000000091 INF: Y Motor: Unshifted Position: 2850150
17-02-28 20:29:42.228 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 176, frameCount = 177.
17-02-28 20:29:42.228 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 177
17-02-28 20:29:42.228 -08 000000089 INF: ===================Camera #2 Frame #177===================
17-02-28 20:29:42.247 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.326 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:29:42.326 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:29:42.326 -08 000000098 INF: ===================Camera #0 Frame #181===================
17-02-28 20:29:42.374 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.397 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:29:42.397 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:29:42.397 -08 000000089 INF: ===================Camera #2 Frame #184===================
17-02-28 20:29:42.494 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:29:42.494 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:29:42.494 -08 000000098 INF: ===================Camera #0 Frame #187===================
17-02-28 20:29:42.510 -08 000000091 INF: Y Motor: Unshifted Position: 2648004
17-02-28 20:29:42.560 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.569 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:29:42.569 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:29:42.569 -08 000000089 INF: ===================Camera #2 Frame #190===================
17-02-28 20:29:42.662 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:29:42.662 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:29:42.662 -08 000000098 INF: ===================Camera #0 Frame #193===================
17-02-28 20:29:42.684 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.738 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:29:42.738 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:29:42.738 -08 000000089 INF: ===================Camera #2 Frame #196===================
17-02-28 20:29:42.823 -08 000000091 INF: Y Motor: Unshifted Position: 2444343
17-02-28 20:29:42.830 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:29:42.830 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:29:42.830 -08 000000098 INF: ===================Camera #0 Frame #199===================
17-02-28 20:29:42.873 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.907 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:29:42.907 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:29:42.907 -08 000000089 INF: ===================Camera #2 Frame #202===================
17-02-28 20:29:42.997 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:42.998 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:29:42.998 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:29:42.998 -08 000000098 INF: ===================Camera #0 Frame #206===================
17-02-28 20:29:43.076 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:29:43.076 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:29:43.076 -08 000000089 INF: ===================Camera #2 Frame #209===================
17-02-28 20:29:43.134 -08 000000091 INF: Y Motor: Unshifted Position: 2242840
17-02-28 20:29:43.169 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:29:43.169 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:29:43.169 -08 000000098 INF: ===================Camera #0 Frame #212===================
17-02-28 20:29:43.184 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:43.248 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:29:43.248 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:29:43.248 -08 000000089 INF: ===================Camera #2 Frame #215===================
17-02-28 20:29:43.311 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:43.337 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:29:43.337 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:29:43.337 -08 000000098 INF: ===================Camera #0 Frame #218===================
17-02-28 20:29:43.417 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:29:43.417 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:29:43.417 -08 000000089 INF: ===================Camera #2 Frame #221===================
17-02-28 20:29:43.447 -08 000000091 INF: Y Motor: Unshifted Position: 2038522
17-02-28 20:29:43.497 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:43.505 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:29:43.505 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:29:43.505 -08 000000098 INF: ===================Camera #0 Frame #224===================
17-02-28 20:29:43.586 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:29:43.586 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:29:43.586 -08 000000089 INF: ===================Camera #2 Frame #227===================
17-02-28 20:29:43.622 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:43.673 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 230, frameCount = 231.
17-02-28 20:29:43.673 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 231
17-02-28 20:29:43.673 -08 000000098 INF: ===================Camera #0 Frame #231===================
17-02-28 20:29:43.755 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 233, frameCount = 234.
17-02-28 20:29:43.755 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 234
17-02-28 20:29:43.755 -08 000000089 INF: ===================Camera #2 Frame #234===================
17-02-28 20:29:43.757 -08 000000091 INF: Y Motor: Unshifted Position: 1837023
17-02-28 20:29:43.807 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:43.844 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:29:43.844 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:29:43.844 -08 000000098 INF: ===================Camera #0 Frame #237===================
17-02-28 20:29:43.927 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:29:43.927 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:29:43.927 -08 000000089 INF: ===================Camera #2 Frame #240===================
17-02-28 20:29:43.935 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.012 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:29:44.012 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:29:44.012 -08 000000098 INF: ===================Camera #0 Frame #243===================
17-02-28 20:29:44.071 -08 000000091 INF: Y Motor: Unshifted Position: 1632699
17-02-28 20:29:44.096 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:29:44.096 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:29:44.096 -08 000000089 INF: ===================Camera #2 Frame #246===================
17-02-28 20:29:44.121 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.180 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:29:44.180 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:29:44.180 -08 000000098 INF: ===================Camera #0 Frame #249===================
17-02-28 20:29:44.244 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.265 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:29:44.265 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:29:44.265 -08 000000089 INF: ===================Camera #2 Frame #252===================
17-02-28 20:29:44.348 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:29:44.348 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:29:44.348 -08 000000098 INF: ===================Camera #0 Frame #255===================
17-02-28 20:29:44.393 -08 000000091 INF: Y Motor: Unshifted Position: 1429900
17-02-28 20:29:44.434 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 258, frameCount = 259.
17-02-28 20:29:44.434 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 259
17-02-28 20:29:44.434 -08 000000089 INF: ===================Camera #2 Frame #259===================
17-02-28 20:29:44.443 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.518 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:29:44.518 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:29:44.518 -08 000000098 INF: ===================Camera #0 Frame #262===================
17-02-28 20:29:44.559 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.607 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:29:44.607 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:29:44.607 -08 000000089 INF: ===================Camera #2 Frame #265===================
17-02-28 20:29:44.689 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:29:44.689 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:29:44.689 -08 000000098 INF: ===================Camera #0 Frame #268===================
17-02-28 20:29:44.695 -08 000000091 INF: Y Motor: Unshifted Position: 1221891
17-02-28 20:29:44.745 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.776 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:29:44.776 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:29:44.776 -08 000000089 INF: ===================Camera #2 Frame #271===================
17-02-28 20:29:44.817 -08 000000095 INF: FPGA: Recv TDIYWAIT
17-02-28 20:29:44.817 -08 000000088 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:44.819 -08 000000088 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:29:44.820 -08 000000044 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:29:44.820 -08 000000047 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:29:44.820 -08 000000044 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:29:44.820 -08 000000044 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:29:44.820 -08 000000044 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:29:44.820 -08 000000044 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:29:44.820 -08 000000047 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:29:44.820 -08 000000047 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:29:44.820 -08 000000047 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:29:44.823 -08 000000047 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:29:44.857 -08 000000098 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:29:44.857 -08 000000098 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:29:44.857 -08 000000098 INF: ===================Camera #0 Frame #272===================
17-02-28 20:29:44.869 -08 000000098 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:29:44.869 -08 000000098 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:44.870 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:44.993 -08 000000098 INF: Camera #0 ReleaseBuffer
17-02-28 20:29:44.993 -08 000000089 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:29:44.993 -08 000000089 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:29:44.993 -08 000000089 INF: ===================Camera #2 Frame #272===================
17-02-28 20:29:44.993 -08 000000098 INF: ===================Camera TDI===================
17-02-28 20:29:44.996 -08 000000089 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:29:44.997 -08 000000089 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:45.005 -08 000000091 INF: Y Motor: Unshifted Position: 1025382
17-02-28 20:29:45.020 -08 000000098 INF: ======================================
17-02-28 20:29:45.055 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:45.170 -08 000000089 INF: Camera #2 ReleaseBuffer
17-02-28 20:29:45.170 -08 000000089 INF: ===================Camera TDI===================
17-02-28 20:29:45.192 -08 000000061 INF: FPGA: Recv EX1MV
17-02-28 20:29:45.193 -08 000000061 INF: FPGA: Recv EX2MV
17-02-28 20:29:45.193 -08 000000047 INF: Excitation Filter 2: Moved 107 steps in 372.1541 ms
17-02-28 20:29:45.193 -08 000000044 INF: Excitation Filter 1: Moved 107 steps in 372.356 ms
17-02-28 20:29:45.193 -08 000000044 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.4537 ms
17-02-28 20:29:45.193 -08 000000044 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.5263 ms
17-02-28 20:29:45.193 -08 000000047 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.2735 ms
17-02-28 20:29:45.193 -08 000000047 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.6461 ms
17-02-28 20:29:45.193 -08 000000044 INF: ======================================
17-02-28 20:29:45.193 -08 000000047 INF: ======================================
17-02-28 20:29:45.194 -08 000000091 INF: Y Motor: Unshifted Position: 992857
17-02-28 20:29:45.194 -08 000000091 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:45.194 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:45.194 -08 000000088 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:45.195 -08 000000088 INF: ======================================
17-02-28 20:29:45.205 -08 000000089 INF: ======================================
17-02-28 20:29:45.206 -08 000000090 INF: ===================Camera TDI===================
17-02-28 20:29:45.207 -08 000000090 INF: ======================================
17-02-28 20:29:45.257 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:29:45.257 -08 000000091 INF: Y Motor: Moved to 14.9286 after 7862 ms
17-02-28 20:29:45.257 -08 000000091 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:45.319 -08 000000091 INF: Y Motor: Recv v 4097\r
17-02-28 20:29:45.319 -08 000000091 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:45.319 -08 000000091 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:45.383 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:29:45.383 -08 000000091 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:45.383 -08 000000091 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:45.443 -08 000000091 INF: Y Motor: Recv v 134217728\r
17-02-28 20:29:45.443 -08 000000091 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:29:45.443 -08 000000091 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:45.443 -08 000000091 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:45.505 -08 000000091 INF: Y Motor: Recv v 0\r
17-02-28 20:29:45.505 -08 000000091 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:45.505 -08 000000091 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:45.505 -08 000000091 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:45.567 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:29:45.567 -08 000000091 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:45.567 -08 000000091 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:45.629 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:29:45.629 -08 000000091 INF: ======================================
17-02-28 20:29:45.630 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:45.631 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:45.632 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:45.632 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:29:45.689 -08 000000087 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:29:45.689 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:45.755 -08 000000070 INF: FPGA: Recv TDIYERD 1492857
17-02-28 20:29:45.755 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:29:45.814 -08 000000071 INF: FPGA: Recv ZADCR 21733
17-02-28 20:29:45.814 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.083. Y moved -48.539 mm
17-02-28 20:29:45.814 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:29:45.879 -08 000000098 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:29:45.879 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:29:45.879 -08 000000042 INF: TDIScan finished after 12810.6776 ms
17-02-28 20:29:45.879 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:29:45.879 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:29:45.881 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:45.916 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.589 um
17-02-28 20:29:45.916 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:45.917 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:29:45.941 -08 000000084 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:29:45.941 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:45.942 -08 000000088 INF: ===================Dither Clean Up Command===================
17-02-28 20:29:45.942 -08 000000105 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:29:45.942 -08 000000059 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:29:45.942 -08 000000047 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:29:45.943 -08 000000059 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:45.943 -08 000000059 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:45.943 -08 000000105 INF: ======================================
17-02-28 20:29:45.943 -08 000000047 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:29:45.943 -08 000000039 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:29:45.943 -08 000000047 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:29:45.943 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:45.944 -08 000000039 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:29:45.946 -08 000000033 INF: ===================LFT:Extracting coords===================
17-02-28 20:29:45.972 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:45.973 -08 000000033 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:29:45.974 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:29:45.974 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:29:45.974 -08 000000023 INF: ===================LookupFocusTracking===================
17-02-28 20:29:45.974 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:29:45.974 -08 000000028 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:45.974 -08 000000077 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:45.974 -08 000000104 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:45.974 -08 000000023 INF: ===================Lookup Focus Tracking===================
17-02-28 20:29:46.003 -08 000000098 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:46.003 -08 000000098 INF: FPGA: Recv ZSEL 
17-02-28 20:29:46.003 -08 000000039 INF: FPGA: Xmit ZDACW 26406\n
17-02-28 20:29:46.003 -08 000000047 INF: ======================================
17-02-28 20:29:46.005 -08 000000059 INF: Y Motor: Recv ok\r
17-02-28 20:29:46.005 -08 000000059 INF: ======================================
17-02-28 20:29:46.048 -08 000000028 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:46.048 -08 000000104 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:46.048 -08 000000077 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:46.049 -08 000000023 INF: FC:B, C:3,L:6, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:29:46.065 -08 000000071 INF: FPGA: Recv ZDACW 
17-02-28 20:29:46.066 -08 000000039 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:29:46.066 -08 000000039 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:29:46.127 -08 000000099 INF: FPGA: Recv TDIBB
17-02-28 20:29:46.127 -08 000000039 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:29:46.128 -08 000000039 INF: ======================================
17-02-28 20:29:46.200 -08 000000028 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:29:46.200 -08 000000104 INF: LFT found best fwhm score 2.000148 in 152 ms
17-02-28 20:29:46.200 -08 000000028 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.079544438526816 in the next cycle, cycle 4 FC:B, C:3,L:6,B
17-02-28 20:29:46.200 -08 000000104 INF: LFT found good score at index 6581 with fwhm value 2.000148. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:6,B
17-02-28 20:29:46.200 -08 000000023 INF: LFT found best fwhm score 2.000426 in 151 ms
17-02-28 20:29:46.200 -08 000000023 INF: LFT found good score at index 2797 with fwhm value 2.000426. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:6,B
17-02-28 20:29:46.200 -08 000000028 INF: ===================LookupFocusTracking===================
17-02-28 20:29:46.200 -08 000000077 INF: LFT found best fwhm score 2.000958 in 151 ms
17-02-28 20:29:46.200 -08 000000104 INF: ===================LookupFocusTracking===================
17-02-28 20:29:46.200 -08 000000077 INF: LFT found good score at index 929 with fwhm value 2.000958. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:6,B
17-02-28 20:29:46.200 -08 000000023 INF: ===================LookupFocusTracking===================
17-02-28 20:29:46.200 -08 000000028 INF: ======================================
17-02-28 20:29:46.200 -08 000000077 INF: ===================LookupFocusTracking===================
17-02-28 20:29:46.200 -08 000000104 INF: ======================================
17-02-28 20:29:46.200 -08 000000023 INF: ======================================
17-02-28 20:29:46.201 -08 000000077 INF: ======================================
17-02-28 20:29:46.201 -08 000000033 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:29:46.202 -08 000000033 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:6,B
17-02-28 20:29:46.203 -08 000000033 INF: ======================================
17-02-28 20:29:46.204 -08 000000088 INF: ======================================
17-02-28 20:29:46.205 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:46.206 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:29:46.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:46.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:29:46.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:29:46.208 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry..., Waiting for image analysis===================
17-02-28 20:29:46.208 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:29:46.208 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:29:46.208 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6, Swath 2 - X = 83.56118 Y = 39.78827===================
17-02-28 20:29:46.231 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:29:46.231 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:46.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:46.232 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.232 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:29:46.232 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 6===================
17-02-28 20:29:46.233 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:29:46.308 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":6,"Tile":2205,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF181","HCSMMF249","HCSMMF264","HCSMMF233"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:29:46.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.323 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:29:46.324 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:46.324 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:46.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:29:46.324 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:29:46.325 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:29:46.326 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:46.352 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":6,"Tile":2204,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF195","HCSMMF202","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.401 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":6,"Tile":2210,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF221","HCSMMF211","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.412 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:29:46.412 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Selecting Reagent HSM (3)===================
17-02-28 20:29:46.412 -08 000000018 INF: Valve A1: Go to position 3
17-02-28 20:29:46.412 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:29:46.422 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":6,"Tile":2212,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF225","HCSMMF281","HCSMMF198","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.424 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":6,"Tile":2202,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF235","HCSMMF215","HCSMMF253"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.429 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":6,"Tile":2203,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF268","HCSMMF232","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.431 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":6,"Tile":2207,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF201","HCSMMF207","HCSMMF227","HCSMMF196"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.432 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":6,"Tile":2214,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF182","HCSMMF248","HCSMMF272","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.433 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":6,"Tile":2217,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF270","HCSMMF278","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.434 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":6,"Tile":2213,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF184","HCSMMF244","HCSMMF246"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.434 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":6,"Tile":2209,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF214","HCSMMF194","HCSMMF210","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.435 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":6,"Tile":2219,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF187","HCSMMF223","HCSMMF228","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.436 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":6,"Tile":2215,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF183","HCSMMF234","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.437 -08 000000039 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":6,"Tile":2206,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF284","HCSMMF180","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.438 -08 000000059 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":6,"Tile":2220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF222","HCSMMF189","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.438 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":6,"Tile":2211,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF240","HCSMMF285","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.440 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":6,"Tile":2227,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF269","HCSMMF204","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.441 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":6,"Tile":2208,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF277","HCSMMF242","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.442 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":6,"Tile":2201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF213","HCSMMF266","HCSMMF177","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.443 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":6,"Tile":2216,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF262","HCSMMF260","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.444 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":6,"Tile":2226,"Channels":["T","G","A","C"],"MemoryMappedFileNames":["HCSMMF245","HCSMMF257","HCSMMF226","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.445 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":6,"Tile":2224,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF241","HCSMMF209","HCSMMF230","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.447 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":6,"Tile":2228,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF275","HCSMMF205","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.448 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":6,"Tile":2218,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF238","HCSMMF254","HCSMMF220","HCSMMF200"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.449 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":6,"Tile":2221,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF239","HCSMMF237","HCSMMF265","HCSMMF251"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.450 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":6,"Tile":2222,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF193","HCSMMF192","HCSMMF217","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.451 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":6,"Tile":2225,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF258","HCSMMF276","HCSMMF267"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.452 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 6 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":6,"Tile":2223,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF212","HCSMMF224","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:29:46.466 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.471 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 5\r
17-02-28 20:29:46.471 -08 000000018 INF: Valve A1: 276.583 seconds since last move, > 10.000 seconds required between moves
17-02-28 20:29:46.471 -08 000000018 INF: Valve A1: Taking shortest path 'CC' from 5 to 3
17-02-28 20:29:46.471 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CC3\r
17-02-28 20:29:46.471 -08 000000018 INF: SerialPort A1 (VICIA1): Recv  (discarded)
17-02-28 20:29:46.471 -08 000000018 INF: SerialPort A1 (VICIA1): Xmit CP\r
17-02-28 20:29:46.472 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:46.472 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:29:46.473 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.473 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:29:46.473 -08 000000042 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations prior to ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:29:46.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.474 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.475 -08 000000080 INF: ===================Move Tilt Motor 2===================
17-02-28 20:29:46.475 -08 000000023 INF: ===================Move Tilt Motor 1===================
17-02-28 20:29:46.475 -08 000000072 INF: ===================Move Tilt Motor 3===================
17-02-28 20:29:46.475 -08 000000072 INF: ======================================
17-02-28 20:29:46.476 -08 000000080 INF: ======================================
17-02-28 20:29:46.476 -08 000000023 INF: ======================================
17-02-28 20:29:46.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.477 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:46.550 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:29:46.559 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:29:46.559 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:29:46.559 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:29:46.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:46.560 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:46.564 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:29:46.564 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:29:46.564 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:29:46.611 -08 000000071 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:46.612 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:46.612 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:29:46.612 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1007 mm
17-02-28 20:29:46.612 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:29:46.619 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.619 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:29:46.657 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.663 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:29:46.673 -08 000000072 INF: FPGA: Recv ZTRG 
17-02-28 20:29:46.673 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:29:46.738 -08 000000084 INF: FPGA: Recv ZYT 
17-02-28 20:29:46.738 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:29:46.738 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:29:46.760 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.765 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:29:46.801 -08 000000069 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:29:46.801 -08 000000069 INF: FPGA: Recv ZMV 
17-02-28 20:29:46.801 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:29:46.801 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.8814 ms
17-02-28 20:29:46.801 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:29:46.854 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.860 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:29:46.862 -08 000000080 INF: FPGA: Recv ZDACR 60292
17-02-28 20:29:46.862 -08 000000042 INF: Z Motor: MoveAndTrigger took 250.5173 ms w/comms
17-02-28 20:29:46.862 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:29:46.862 -08 000000042 INF: Z Motor: MoveAbsStepped took 250.6842 ms
17-02-28 20:29:46.863 -08 000000018 INF: SerialPort A1 (VICIA1): Recv Position is  = 3\r
17-02-28 20:29:46.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:46.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:29:46.863 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Opening shutoff valve===================
17-02-28 20:29:46.863 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:29:46.872 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:29:46.872 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:46.872 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:46.872 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:29:46.872 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:29:46.925 -08 000000086 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:46.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:46.936 -08 000000042 INF: Transformed XStagePosition from 85.77563 mm to 85.775634765625 mm.
17-02-28 20:29:46.945 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:29:46.945 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:46.945 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:29:46.947 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:46.947 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:29:46.947 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:46.948 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = G_1
17-02-28 20:29:46.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:46.948 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:46.949 -08 000000083 INF: ===================MoveEmissionFilters===================
17-02-28 20:29:46.949 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:29:46.950 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:46.950 -08 000000034 INF: ===================Move X,Y, Parallel===================
17-02-28 20:29:46.950 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:46.950 -08 000000079 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:46.950 -08 000000082 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:46.951 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:46.951 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:46.951 -08 000000082 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:46.951 -08 000000062 INF: ===================Move X Motor without settling===================
17-02-28 20:29:46.952 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:46.952 -08 000000062 INF: X Motor: Xmit PR VM\n
17-02-28 20:29:46.952 -08 000000058 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9286 mm
17-02-28 20:29:46.952 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:46.952 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:46.952 -08 000000056 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:29:46.952 -08 000000030 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:29:46.952 -08 000000077 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:29:46.952 -08 000000088 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:29:46.952 -08 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:29:46.952 -08 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:29:46.952 -08 000000056 INF: ======================================
17-02-28 20:29:46.953 -08 000000077 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:29:46.953 -08 000000088 INF: ======================================
17-02-28 20:29:46.953 -08 000000077 INF: ======================================
17-02-28 20:29:46.953 -08 000000079 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:46.953 -08 000000030 INF: ======================================
17-02-28 20:29:46.954 -08 000000090 INF: ======================================
17-02-28 20:29:46.954 -08 000000039 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:46.955 -08 000000089 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:29:46.955 -08 000000069 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:46.955 -08 000000077 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:29:46.955 -08 000000039 INF: ======================================
17-02-28 20:29:46.956 -08 000000077 INF: ======================================
17-02-28 20:29:46.956 -08 000000029 INF: ======================================
17-02-28 20:29:46.956 -08 000000069 INF: ======================================
17-02-28 20:29:46.957 -08 000000082 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:46.958 -08 000000089 INF: ======================================
17-02-28 20:29:46.958 -08 000000082 INF: ======================================
17-02-28 20:29:46.959 -08 000000079 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:46.961 -08 000000079 INF: ======================================
17-02-28 20:29:46.962 -08 000000083 INF: ======================================
17-02-28 20:29:46.970 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:29:46.988 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:29:46.988 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:46.988 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:46.988 -08 000000062 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:29:46.988 -08 000000062 INF: X Motor: Xmit PR VI\n
17-02-28 20:29:47.052 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:29:47.052 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:47.052 -08 000000062 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:29:47.052 -08 000000062 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:29:47.052 -08 000000062 INF: X Motor: Moving to 85.7756 mm @15.000 mm/sec, started at 83.5386 mm
17-02-28 20:29:47.052 -08 000000062 INF: X Motor: Xmit MA 10967\n
17-02-28 20:29:47.112 -08 000000062 INF: X Motor: Recv MA 10967\r\n>
17-02-28 20:29:47.112 -08 000000062 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:29:47.113 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:29:47.113 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:47.113 -08 000000058 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:29:47.113 -08 000000058 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:29:47.174 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:29:47.174 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:29:47.174 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:47.232 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:29:47.233 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:29:47.233 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:47.239 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:29:47.239 -08 000000058 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:29:47.239 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:47.280 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:29:47.298 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:29:47.306 -08 000000018 INF: KloehnPump A (KLOEHNA): Pumping from 3, aspirate port PortB, aspiration rate 250, dispense rate 2000, volume 70, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=3, Children=0, Thread="Run", Parent="Prepare for scanning", Type=SameThreadBlocking, solution delay 5000
17-02-28 20:29:47.361 -08 000000058 INF: Y Motor: Unshifted Position: 1075241
17-02-28 20:29:47.398 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:29:47.411 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:47.487 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF)
17-02-28 20:29:47.487 -08 000000018 INF: Current Position of Pump is: 0
17-02-28 20:29:47.538 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:47.587 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r
17-02-28 20:29:47.673 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:47.674 -08 000000058 INF: Y Motor: Unshifted Position: 1787003
17-02-28 20:29:47.724 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:47.736 -08 000000062 INF: X Motor: Xmit PR ER\n
17-02-28 20:29:47.773 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:47.798 -08 000000062 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:29:47.798 -08 000000062 INF: X Motor: Moved to 85.7749 after 686 ms
17-02-28 20:29:47.798 -08 000000062 INF: ======================================
17-02-28 20:29:47.848 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:47.863 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:47.985 -08 000000058 INF: Y Motor: Unshifted Position: 2567042
17-02-28 20:29:48.035 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:48.113 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:48.162 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:48.173 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:29:48.273 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r
17-02-28 20:29:48.297 -08 000000058 INF: Y Motor: Unshifted Position: 3342818
17-02-28 20:29:48.347 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:48.361 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:48.461 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:48.476 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:48.547 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:29:48.547 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Aspirating port PortB===================
17-02-28 20:29:48.611 -08 000000058 INF: Y Motor: Unshifted Position: 4126235
17-02-28 20:29:48.647 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V800IP13440R\r
17-02-28 20:29:48.661 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:48.733 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:48.784 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:48.833 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:48.858 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:48.923 -08 000000058 INF: Y Motor: Unshifted Position: 4922022
17-02-28 20:29:48.973 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:49.099 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:49.108 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:49.172 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:49.235 -08 000000058 INF: Y Motor: Unshifted Position: 5682771
17-02-28 20:29:49.285 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:49.410 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:49.422 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:49.483 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:49.546 -08 000000058 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:29:49.546 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:49.546 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:49.610 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:29:49.610 -08 000000058 INF: Y Motor: Moved to 64.5335 after 2371 ms
17-02-28 20:29:49.610 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:49.672 -08 000000058 INF: Y Motor: Recv v 4096\r
17-02-28 20:29:49.672 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:49.672 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:49.735 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:29:49.735 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:49.735 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:49.735 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:49.795 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:49.796 -08 000000058 INF: Y Motor: Recv v 402653184\r
17-02-28 20:29:49.796 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:29:49.796 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:49.796 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:49.858 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:29:49.858 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:49.858 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:49.858 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:49.924 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:29:49.924 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:49.924 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:49.984 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:29:49.984 -08 000000058 INF: ======================================
17-02-28 20:29:49.985 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:29:49.987 -08 000000034 INF: ======================================
17-02-28 20:29:49.989 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:49.990 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:49.990 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:29:49.990 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:29:50.047 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:50.048 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:50.048 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:29:50.105 -08 000000033 INF: FPGA: Recv ZFREQCL
17-02-28 20:29:50.105 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:29:50.106 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:50.106 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:50.106 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:50.167 -08 000000060 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:29:50.167 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:29:50.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:50.168 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:50.169 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:29:50.169 -08 000000098 INF: ===================Set YMotor gains for scans===================
17-02-28 20:29:50.169 -08 000000098 INF: ======================================
17-02-28 20:29:50.170 -08 000000061 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:29:50.170 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:29:50.171 -08 000000061 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:29:50.172 -08 000000061 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:29:50.172 -08 000000061 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:29:50.232 -08 000000051 INF: FPGA: Recv TDIYPOS
17-02-28 20:29:50.232 -08 000000061 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:29:50.234 -08 000000061 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:29:50.234 -08 000000061 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:29:50.295 -08 000000039 INF: FPGA: Recv TDIYARM2
17-02-28 20:29:50.295 -08 000000061 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:29:50.297 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:29:50.298 -08 000000061 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:29:50.298 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:29:50.300 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:29:50.301 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:29:50.301 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:50.356 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:50.420 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:50.670 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:50.670 -08 000000061 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:29:50.670 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:29:50.670 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:50.685 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:29:50.687 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:50.732 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:50.982 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:51.042 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:51.074 -08 000000061 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53821386880 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:29:51.075 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:29:51.075 -08 000000061 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:51.090 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:29:51.093 -08 000000061 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:29:51.095 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:29:51.097 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:51.098 -08 000000061 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:29:51.098 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:51.101 -08 000000061 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:29:51.101 -08 000000061 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:29:51.101 -08 000000061 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:29:51.101 -08 000000061 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:29:51.167 -08 000000056 INF: FPGA: Recv ZYT 
17-02-28 20:29:51.167 -08 000000061 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:29:51.167 -08 000000061 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:29:51.229 -08 000000086 INF: FPGA: Recv ZARM
17-02-28 20:29:51.229 -08 000000061 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8633 ms
17-02-28 20:29:51.229 -08 000000061 INF: Z Motor: ArmAbsStepped took 127.7932 ms
17-02-28 20:29:51.230 -08 000000061 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:51.232 -08 000000061 INF: ===================TDI Scan Setup===================
17-02-28 20:29:51.233 -08 000000061 INF: ======================================
17-02-28 20:29:51.235 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:51.236 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:51.236 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:51.237 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:51.237 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:51.238 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:29:51.238 -08 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:29:51.238 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:29:51.238 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:29:51.238 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:29:51.238 -08 000000023 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:29:51.238 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:29:51.238 -08 000000023 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:29:51.238 -08 000000023 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:29:51.241 -08 000000023 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:29:51.292 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:51.354 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:51.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:51.604 -08 000000068 INF: FPGA: Recv EX2MV
17-02-28 20:29:51.604 -08 000000068 INF: FPGA: Recv EX1MV
17-02-28 20:29:51.604 -08 000000023 INF: Excitation Filter 1: Moved -107 steps in 365.9285 ms
17-02-28 20:29:51.604 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 366.1045 ms
17-02-28 20:29:51.604 -08 000000023 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 366.0943 ms
17-02-28 20:29:51.604 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 366.2193 ms
17-02-28 20:29:51.605 -08 000000023 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 366.2022 ms
17-02-28 20:29:51.605 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 366.33 ms
17-02-28 20:29:51.605 -08 000000023 INF: ======================================
17-02-28 20:29:51.605 -08 000000039 INF: ======================================
17-02-28 20:29:51.607 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:51.609 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:51.610 -08 000000099 INF: ===================Serial===================
17-02-28 20:29:51.610 -08 000000051 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:51.610 -08 000000051 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:29:51.610 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:29:51.610 -08 000000051 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:51.610 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:51.610 -08 000000071 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:51.610 -08 000000099 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:29:51.611 -08 000000099 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:29:51.611 -08 000000091 INF: ===================Camera TDI, Parallel===================
17-02-28 20:29:51.611 -08 000000071 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:29:51.612 -08 000000088 INF: ===================Camera TDI===================
17-02-28 20:29:51.613 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:29:51.614 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:51.614 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:51.614 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:51.614 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:51.616 -08 000000071 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:29:51.667 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:51.668 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:29:51.668 -08 000000051 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:51.668 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:51.730 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:29:51.730 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:51.764 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:51.764 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:51.764 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:51.764 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:51.792 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:29:51.792 -08 000000051 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:51.792 -08 000000051 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:29:51.792 -08 000000051 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:29:51.854 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:29:51.854 -08 000000051 INF: Y Motor: Start the move command
17-02-28 20:29:51.854 -08 000000051 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:51.914 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:51.914 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:51.914 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:51.914 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:51.916 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:29:51.916 -08 000000051 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:29:51.916 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:51.917 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:51.979 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:52.042 -08 000000051 INF: Y Motor: Unshifted Position: 5935033
17-02-28 20:29:52.064 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:52.064 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:52.064 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:52.064 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:52.092 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:52.214 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:29:52.214 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:29:52.214 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:29:52.214 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:29:52.214 -08 000000088 INF: ===================Camera #0 Frame #1===================
17-02-28 20:29:52.214 -08 000000064 INF: ===================Camera #2 Frame #1===================
17-02-28 20:29:52.218 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:52.229 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:52.290 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:52.353 -08 000000051 INF: Y Motor: Unshifted Position: 5888176
17-02-28 20:29:52.369 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:29:52.369 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:29:52.369 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:29:52.369 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:29:52.369 -08 000000064 INF: ===================Camera #2 Frame #3===================
17-02-28 20:29:52.369 -08 000000088 INF: ===================Camera #0 Frame #3===================
17-02-28 20:29:52.403 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:52.526 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:29:52.526 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:29:52.526 -08 000000064 INF: ===================Camera #2 Frame #4===================
17-02-28 20:29:52.528 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:29:52.528 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:29:52.528 -08 000000088 INF: ===================Camera #0 Frame #4===================
17-02-28 20:29:52.530 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:52.540 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:52.604 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:52.667 -08 000000051 INF: Y Motor: Unshifted Position: 5841227
17-02-28 20:29:52.681 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:52.681 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:52.681 -08 000000064 INF: ===================Camera #2 Frame #5===================
17-02-28 20:29:52.684 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:52.684 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:52.684 -08 000000088 INF: ===================Camera #0 Frame #5===================
17-02-28 20:29:52.717 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:52.728 -08 000000047 INF: FPGA: Recv ZWAIT 
17-02-28 20:29:52.728 -08 000000047 INF: FPGA: Recv TDIYWAIT
17-02-28 20:29:52.728 -08 000000071 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:52.729 -08 000000099 INF: ===================Serial===================
17-02-28 20:29:52.730 -08 000000071 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:29:52.730 -08 000000099 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:29:52.731 -08 000000099 INF: ===================Serial===================
17-02-28 20:29:52.731 -08 000000105 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:29:52.731 -08 000000105 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:29:52.731 -08 000000105 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:29:52.731 -08 000000105 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:29:52.731 -08 000000105 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:29:52.732 -08 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:29:52.732 -08 000000099 INF: ======================================
17-02-28 20:29:52.732 -08 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:29:52.732 -08 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:29:52.732 -08 000000033 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:29:52.733 -08 000000033 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:29:52.834 -08 000000064 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:29:52.834 -08 000000064 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:29:52.834 -08 000000064 INF: ===================Camera #2 Frame #6===================
17-02-28 20:29:52.837 -08 000000088 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:29:52.837 -08 000000088 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:29:52.837 -08 000000088 INF: ===================Camera #0 Frame #6===================
17-02-28 20:29:52.837 -08 000000064 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:29:52.838 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:52.840 -08 000000088 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:29:52.841 -08 000000088 INF: ===================CameraTDI Cleanup===================
17-02-28 20:29:52.842 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:52.854 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:52.864 -08 000000064 INF: Camera #2 ReleaseBuffer
17-02-28 20:29:52.864 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:29:52.865 -08 000000064 INF: ======================================
17-02-28 20:29:52.889 -08 000000088 INF: Camera #0 ReleaseBuffer
17-02-28 20:29:52.889 -08 000000088 INF: ===================Camera TDI===================
17-02-28 20:29:52.890 -08 000000088 INF: ======================================
17-02-28 20:29:52.892 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:29:52.893 -08 000000091 INF: ======================================
17-02-28 20:29:52.914 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:52.977 -08 000000051 INF: Y Motor: Unshifted Position: 5797057
17-02-28 20:29:53.027 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:53.101 -08 000000091 INF: FPGA: Recv EX1MV
17-02-28 20:29:53.101 -08 000000105 INF: Excitation Filter 1: Moved 107 steps in 369.6667 ms
17-02-28 20:29:53.101 -08 000000105 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 369.7998 ms
17-02-28 20:29:53.101 -08 000000105 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 369.872 ms
17-02-28 20:29:53.102 -08 000000105 INF: ======================================
17-02-28 20:29:53.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:53.164 -08 000000087 INF: FPGA: Recv EX2MV
17-02-28 20:29:53.164 -08 000000033 INF: Excitation Filter 2: Moved 107 steps in 431.9326 ms
17-02-28 20:29:53.164 -08 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 432.1063 ms
17-02-28 20:29:53.164 -08 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 432.2333 ms
17-02-28 20:29:53.164 -08 000000033 INF: ======================================
17-02-28 20:29:53.166 -08 000000051 INF: Y Motor: Unshifted Position: 5797041
17-02-28 20:29:53.166 -08 000000051 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:53.166 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:53.166 -08 000000071 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:53.168 -08 000000071 INF: ======================================
17-02-28 20:29:53.227 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:53.228 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:29:53.228 -08 000000051 INF: Y Motor: Moved to 62.9704 after 1312 ms
17-02-28 20:29:53.228 -08 000000051 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:53.292 -08 000000051 INF: Y Motor: Recv v 4097\r
17-02-28 20:29:53.292 -08 000000051 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:53.292 -08 000000051 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:53.352 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:29:53.352 -08 000000051 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:53.352 -08 000000051 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:53.414 -08 000000051 INF: Y Motor: Recv v 134217728\r
17-02-28 20:29:53.414 -08 000000051 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:29:53.414 -08 000000051 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:53.414 -08 000000051 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:53.477 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:53.482 -08 000000051 INF: Y Motor: Recv v 0\r
17-02-28 20:29:53.482 -08 000000051 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:53.482 -08 000000051 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:53.482 -08 000000051 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:53.541 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:29:53.541 -08 000000051 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:53.541 -08 000000051 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:53.542 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:53.602 -08 000000051 INF: Y Motor: Recv ok\r
17-02-28 20:29:53.602 -08 000000051 INF: ======================================
17-02-28 20:29:53.603 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:53.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:29:53.605 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:53.605 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:29:53.662 -08 000000070 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:29:53.662 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:53.726 -08 000000071 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:29:53.726 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:29:53.788 -08 000000104 INF: FPGA: Recv ZADCR 2423
17-02-28 20:29:53.788 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:29:53.788 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:29:53.792 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:53.850 -08 000000060 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:29:53.850 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:29:53.850 -08 000000042 INF: TDIScan finished after 6914.0961 ms
17-02-28 20:29:53.850 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:29:53.850 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:29:53.851 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:53.851 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:29:53.912 -08 000000078 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:29:53.913 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:53.913 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:53.914 -08 000000105 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:29:53.914 -08 000000099 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:29:53.914 -08 000000034 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:29:53.915 -08 000000034 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:29:53.915 -08 000000034 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:29:53.915 -08 000000105 INF: ======================================
17-02-28 20:29:53.915 -08 000000099 INF: ======================================
17-02-28 20:29:53.978 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:29:53.978 -08 000000034 INF: ======================================
17-02-28 20:29:53.979 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:53.980 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:53.981 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:29:54.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:54.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:29:54.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:54.081 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:29:54.101 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:54.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:54.123 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:29:54.164 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:54.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:29:54.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:54.173 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:54.174 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:29:54.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:54.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:29:54.182 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:29:54.414 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:54.475 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:54.725 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:54.787 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:54.866 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1, Selecting focus point===================
17-02-28 20:29:54.889 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0809551572916931Best Z position at top surface = -0.152669269182996Best Z position at top surface + compensator offset = -0.129969269182996 C:3,L:7,B
17-02-28 20:29:54.891 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.152669269182996
17-02-28 20:29:54.891 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.9414
17-02-28 20:29:54.891 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0809551572916931
17-02-28 20:29:54.891 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.5964
17-02-28 20:29:54.891 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0809551572916931.
17-02-28 20:29:54.891 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:55.024 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:29:55.024 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:29:55.035 -08 000000071 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:55.035 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Focus Point 1===================
17-02-28 20:29:55.036 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.037 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:55.037 -08 000000042 INF: Lane 7, LaneBottomSurface Surface was not flagged for detilt operations after ETF. Moving to default tilt positions: m1=5.000498, m2=5.39242, m3=5.33908
17-02-28 20:29:55.037 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.038 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.038 -08 000000100 INF: ===================Move Tilt Motor 1===================
17-02-28 20:29:55.038 -08 000000030 INF: ===================Move Tilt Motor 3===================
17-02-28 20:29:55.039 -08 000000061 INF: ===================Move Tilt Motor 2===================
17-02-28 20:29:55.039 -08 000000030 INF: ======================================
17-02-28 20:29:55.039 -08 000000061 INF: ======================================
17-02-28 20:29:55.040 -08 000000100 INF: ======================================
17-02-28 20:29:55.040 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.041 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.042 -08 000000042 INF: ETF Best Z: -0.08095516 mm (21222 DAC)
17-02-28 20:29:55.042 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.043 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:29:55.043 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.044 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:29:55.050 -08 000000042 INF: Swath 1 position calculated to be: {X=85.21818, Y=39.78827} from estimated center X= 85.73699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:29:55.050 -08 000000042 INF: Swath 2 position calculated to be: {X=86.32618, Y=39.78827} from estimated center X= 85.73699, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:29:55.442 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:55.444 -08 000000042 INF: Swath 0: Converted transform from (-39.29723, -4.247578) pixels to (-0.013455, -0.00138) mm.
17-02-28 20:29:55.450 -08 000000042 INF: Swath 1: Converted transform from (-59.87337, -3.102332) pixels to (-0.0207, -0.001035) mm.
17-02-28 20:29:55.451 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:29:55.451 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:29:55.452 -08 000000042 INF: Transformed XStagePosition from 85.21818 mm to 85.2047227956355 mm.
17-02-28 20:29:55.463 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5768978014831 mm.
17-02-28 20:29:55.463 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3768978014831 mm.
17-02-28 20:29:55.463 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.467647801483 mm.
17-02-28 20:29:55.465 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:55.465 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:29:55.466 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:55.466 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = G_1
17-02-28 20:29:55.471 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:55.472 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:55.472 -08 000000087 INF: ===================MoveEmissionFilters===================
17-02-28 20:29:55.472 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:55.473 -08 000000082 INF: ===================Move X,Y===================
17-02-28 20:29:55.473 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:55.473 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:29:55.473 -08 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:55.473 -08 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:55.473 -08 000000071 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:29:55.473 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:55.473 -08 000000071 INF: Z Motor: Moving to -0.1010 mm, started at -0.0100 mm
17-02-28 20:29:55.473 -08 000000082 INF: ===================Move X,Y, Parallel===================
17-02-28 20:29:55.474 -08 000000071 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:29:55.474 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:55.474 -08 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:29:55.474 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:55.474 -08 000000086 INF: ===================Move X Motor without settling===================
17-02-28 20:29:55.474 -08 000000030 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:55.474 -08 000000086 INF: X Motor: Xmit PR VM\n
17-02-28 20:29:55.475 -08 000000030 INF: Y Motor: Moving to 64.5769 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:29:55.475 -08 000000100 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:29:55.475 -08 000000030 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:55.475 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:55.475 -08 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:29:55.475 -08 000000032 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:29:55.475 -08 000000044 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:29:55.475 -08 000000088 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:29:55.475 -08 000000100 INF: ======================================
17-02-28 20:29:55.475 -08 000000056 INF: ======================================
17-02-28 20:29:55.476 -08 000000088 INF: ======================================
17-02-28 20:29:55.476 -08 000000108 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:29:55.476 -08 000000044 INF: ======================================
17-02-28 20:29:55.476 -08 000000108 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:29:55.476 -08 000000108 INF: ======================================
17-02-28 20:29:55.476 -08 000000050 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:29:55.477 -08 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:29:55.477 -08 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:29:55.478 -08 000000044 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:29:55.478 -08 000000051 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:29:55.478 -08 000000050 INF: ======================================
17-02-28 20:29:55.478 -08 000000051 INF: ======================================
17-02-28 20:29:55.478 -08 000000032 INF: ======================================
17-02-28 20:29:55.478 -08 000000068 INF: ======================================
17-02-28 20:29:55.479 -08 000000044 INF: ======================================
17-02-28 20:29:55.479 -08 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:29:55.480 -08 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:29:55.481 -08 000000023 INF: ======================================
17-02-28 20:29:55.481 -08 000000060 INF: ======================================
17-02-28 20:29:55.482 -08 000000087 INF: ======================================
17-02-28 20:29:55.505 -08 000000091 INF: FPGA: Recv ZTRG 
17-02-28 20:29:55.505 -08 000000071 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:29:55.507 -08 000000086 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:29:55.507 -08 000000086 INF: X Motor: Xmit PR VI\n
17-02-28 20:29:55.553 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:29:55.553 -08 000000030 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:55.553 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:55.566 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:29:55.566 -08 000000071 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:29:55.566 -08 000000071 INF: FPGA: Xmit ZMV 26464\n
17-02-28 20:29:55.568 -08 000000086 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:29:55.568 -08 000000086 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:29:55.568 -08 000000086 INF: X Motor: Moving to 85.2047 mm @15.000 mm/sec, started at 85.7749 mm
17-02-28 20:29:55.568 -08 000000086 INF: X Motor: Xmit MA 10733\n
17-02-28 20:29:55.615 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:29:55.615 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:55.628 -08 000000102 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:29:55.628 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:29:55.630 -08 000000086 INF: X Motor: Recv MA 10733\r\n>
17-02-28 20:29:55.630 -08 000000086 INF: X Motor: WaitUntilStopped 60038
17-02-28 20:29:55.676 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:29:55.676 -08 000000030 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:55.676 -08 000000030 INF: Y Motor: Set target position to 5957690 encoder counts
17-02-28 20:29:55.676 -08 000000030 INF: Y Motor: Xmit s r0xca 5957690\r
17-02-28 20:29:55.689 -08 000000036 INF: FPGA: Recv ZMV 
17-02-28 20:29:55.689 -08 000000071 INF: Z Motor: MoveAndTrigger 'ZMV' command took 122.8941 ms
17-02-28 20:29:55.689 -08 000000071 INF: FPGA: Xmit ZDACR\n
17-02-28 20:29:55.692 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:55.738 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:29:55.738 -08 000000030 INF: Y Motor: Start the move command
17-02-28 20:29:55.738 -08 000000030 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:55.754 -08 000000091 INF: FPGA: Recv ZDACR 26464
17-02-28 20:29:55.754 -08 000000071 INF: Z Motor: MoveAndTrigger took 280.4638 ms w/comms
17-02-28 20:29:55.754 -08 000000071 INF: Z Motor: After move to -0.1010, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:29:55.754 -08 000000071 INF: Z Motor: MoveAbsStepped took 280.6322 ms
17-02-28 20:29:55.754 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:55.755 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:55.756 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:29:55.757 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:29:55.757 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:29:55.757 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:55.758 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:55.758 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:29:55.758 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:55.758 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:55.759 -08 000000072 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:29:55.802 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:29:55.802 -08 000000030 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:29:55.802 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:55.816 -08 000000108 INF: FPGA: Recv ZSEL 
17-02-28 20:29:55.816 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:55.817 -08 000000072 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:29:55.877 -08 000000064 INF: FPGA: Recv TDIBB
17-02-28 20:29:55.877 -08 000000072 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:29:55.878 -08 000000072 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:29:55.879 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:55.880 -08 000000072 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:29:55.880 -08 000000072 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:29:55.881 -08 000000072 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:29:55.926 -08 000000030 INF: Y Motor: Unshifted Position: 5881478
17-02-28 20:29:55.939 -08 000000090 INF: FPGA: Recv ZSTEP 
17-02-28 20:29:55.939 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:55.941 -08 000000072 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:29:55.941 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:55.943 -08 000000072 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:29:55.943 -08 000000072 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:29:55.943 -08 000000072 INF: Z Motor: Arming to move to -0.0610 mm
17-02-28 20:29:55.943 -08 000000072 INF: FPGA: Xmit ZYT 6437690 4\n
17-02-28 20:29:55.976 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:56.002 -08 000000044 INF: FPGA: Recv ZYT 
17-02-28 20:29:56.002 -08 000000072 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6381478 enc / 63.815 mm / ) = 6437690 enc / 64.377 mm
17-02-28 20:29:56.002 -08 000000072 INF: FPGA: Xmit ZARM 15979\n
17-02-28 20:29:56.005 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:56.064 -08 000000090 INF: FPGA: Recv ZARM
17-02-28 20:29:56.064 -08 000000072 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9514 ms
17-02-28 20:29:56.064 -08 000000072 INF: Z Motor: ArmAbsStepped took 120.8145 ms
17-02-28 20:29:56.064 -08 000000072 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:29:56.065 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:56.065 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:29:56.066 -08 000000086 INF: X Motor: Xmit PR ER\n
17-02-28 20:29:56.067 -08 000000072 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:29:56.067 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:29:56.069 -08 000000072 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:29:56.069 -08 000000072 INF: ===================TDI Scan Setup===================
17-02-28 20:29:56.070 -08 000000072 INF: ======================================
17-02-28 20:29:56.101 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:56.131 -08 000000086 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:29:56.131 -08 000000086 INF: X Motor: Moved to 85.2036 after 501 ms
17-02-28 20:29:56.131 -08 000000086 INF: ======================================
17-02-28 20:29:56.239 -08 000000030 INF: Y Motor: Unshifted Position: 5957692
17-02-28 20:29:56.239 -08 000000030 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:29:56.239 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:56.300 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:29:56.300 -08 000000030 INF: Y Motor: Moved to 64.5769 after 498 ms
17-02-28 20:29:56.300 -08 000000030 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:29:56.315 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:56.363 -08 000000030 INF: Y Motor: Recv v 4096\r
17-02-28 20:29:56.363 -08 000000030 INF: Y Motor: Status After move finished OK:
17-02-28 20:29:56.363 -08 000000030 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:56.380 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:56.428 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:29:56.428 -08 000000030 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:56.428 -08 000000030 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:29:56.488 -08 000000030 INF: Y Motor: Recv v 402653184\r
17-02-28 20:29:56.488 -08 000000030 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:29:56.488 -08 000000030 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:29:56.488 -08 000000030 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:29:56.551 -08 000000030 INF: Y Motor: Recv v 0\r
17-02-28 20:29:56.551 -08 000000030 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:29:56.551 -08 000000030 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:29:56.551 -08 000000030 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:56.615 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:29:56.615 -08 000000030 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:29:56.615 -08 000000030 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:56.630 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:56.677 -08 000000030 INF: Y Motor: Recv ok\r
17-02-28 20:29:56.677 -08 000000030 INF: ======================================
17-02-28 20:29:56.678 -08 000000082 INF: ===================Move X,Y===================
17-02-28 20:29:56.679 -08 000000082 INF: ======================================
17-02-28 20:29:56.691 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:56.716 -08 000000058 INF: Camera #0 AttachBuffer (imageDataPtr = 56923787312 imgPtr = 56923787312 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:29:56.716 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:29:56.716 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:56.731 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:56.733 -08 000000058 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:29:56.941 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:57.002 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:57.252 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:57.316 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:57.482 -08 000000030 INF: RunCopyService queue size at 2/28/2017 8:29:57 PM is 2
17-02-28 20:29:57.566 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:57.627 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:57.770 -08 000000058 INF: Camera #2 AttachBuffer (imageDataPtr = 58735726640 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:29:57.770 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:29:57.770 -08 000000058 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:29:57.785 -08 000000058 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:29:57.787 -08 000000058 INF: ===================Camera Arm TDI===================
17-02-28 20:29:57.788 -08 000000058 INF: ======================================
17-02-28 20:29:57.789 -08 000000071 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:29:57.790 -08 000000071 INF: ======================================
17-02-28 20:29:57.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:29:57.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:57.792 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:29:57.792 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:29:57.862 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:29:57.862 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:29:57.875 -08 000000036 INF: FPGA: Recv ZFREQCL
17-02-28 20:29:57.875 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:29:57.875 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:57.875 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:29:57.877 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:57.937 -08 000000090 INF: FPGA: Recv TDIYERD 6457691
17-02-28 20:29:57.937 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457691 counts (64.577 mm)
17-02-28 20:29:57.937 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:57.938 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:57.938 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:57.938 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:57.938 -08 000000050 INF: ===================Set YMotor gains for scans===================
17-02-28 20:29:57.939 -08 000000050 INF: ======================================
17-02-28 20:29:57.939 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:57.940 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:29:57.940 -08 000000073 INF: FPGA: Xmit TDIYPOS 6346765\n
17-02-28 20:29:58.002 -08 000000058 INF: FPGA: Recv TDIYPOS
17-02-28 20:29:58.002 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:58.003 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:29:58.003 -08 000000073 INF: FPGA: Xmit TDIYARM3 139264 6437690 1 1\n
17-02-28 20:29:58.063 -08 000000078 INF: FPGA: Recv TDIYARM3
17-02-28 20:29:58.063 -08 000000073 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:29:58.064 -08 000000073 INF: ===================TDI FPGA Arm===================
17-02-28 20:29:58.065 -08 000000073 INF: ======================================
17-02-28 20:29:58.066 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:29:58.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:29:58.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:58.067 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:58.068 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:58.069 -08 000000086 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:29:58.069 -08 000000087 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:29:58.069 -08 000000086 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:29:58.069 -08 000000086 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:29:58.069 -08 000000086 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:29:58.069 -08 000000087 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:29:58.069 -08 000000086 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:29:58.069 -08 000000087 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:29:58.069 -08 000000087 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:29:58.070 -08 000000087 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:29:58.188 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:58.251 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:58.438 -08 000000078 INF: FPGA: Recv EX2MV
17-02-28 20:29:58.438 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:29:58.438 -08 000000087 INF: Excitation Filter 1: Moved -107 steps in 368.6254 ms
17-02-28 20:29:58.438 -08 000000087 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7547 ms
17-02-28 20:29:58.438 -08 000000087 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.8261 ms
17-02-28 20:29:58.438 -08 000000086 INF: Excitation Filter 2: Moved -107 steps in 368.8216 ms
17-02-28 20:29:58.438 -08 000000086 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0112 ms
17-02-28 20:29:58.438 -08 000000086 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.112 ms
17-02-28 20:29:58.438 -08 000000087 INF: ======================================
17-02-28 20:29:58.438 -08 000000086 INF: ======================================
17-02-28 20:29:58.439 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:58.440 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:29:58.441 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:29:58.441 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:29:58.441 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:29:58.441 -08 000000108 INF: ===================Move Y Motor without settling===================
17-02-28 20:29:58.442 -08 000000108 INF: Y Motor: Moving to 14.9286 mm @6.500 mm/sec, started at 64.5769 mm
17-02-28 20:29:58.442 -08 000000108 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:29:58.442 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:29:58.442 -08 000000091 INF: ===================Camera TDI, Parallel===================
17-02-28 20:29:58.442 -08 000000036 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:29:58.442 -08 000000036 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:29:58.443 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:29:58.443 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:29:58.443 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:29:58.444 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:58.444 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:58.445 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:58.445 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:58.487 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:29:58.487 -08 000000108 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:29:58.487 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:29:58.501 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:58.549 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:29:58.549 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:29:58.563 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:58.595 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:58.595 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:58.595 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:58.595 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:58.609 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:29:58.609 -08 000000108 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:29:58.609 -08 000000108 INF: Y Motor: Set target position to 992856 encoder counts
17-02-28 20:29:58.609 -08 000000108 INF: Y Motor: Xmit s r0xca 992856\r
17-02-28 20:29:58.674 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:29:58.674 -08 000000108 INF: Y Motor: Start the move command
17-02-28 20:29:58.674 -08 000000108 INF: Y Motor: Xmit t 1\r
17-02-28 20:29:58.734 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:29:58.734 -08 000000108 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:29:58.734 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:58.745 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:58.745 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:58.745 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:29:58.745 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:29:58.811 -08 000000052 INF: FPGA: Recv ZWAIT 
17-02-28 20:29:58.811 -08 000000051 INF: ======================================
17-02-28 20:29:58.813 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:58.860 -08 000000108 INF: Y Motor: Unshifted Position: 5895839
17-02-28 20:29:58.874 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:58.895 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:58.895 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:29:58.895 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:58.895 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:29:58.895 -08 000000095 INF: ===================Camera #2 Frame #5===================
17-02-28 20:29:58.895 -08 000000064 INF: ===================Camera #0 Frame #5===================
17-02-28 20:29:58.910 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.036 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.061 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:59.061 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:59.061 -08 000000064 INF: ===================Camera #0 Frame #11===================
17-02-28 20:29:59.062 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:29:59.062 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:29:59.062 -08 000000095 INF: ===================Camera #2 Frame #11===================
17-02-28 20:29:59.124 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:59.173 -08 000000108 INF: Y Motor: Unshifted Position: 5692174
17-02-28 20:29:59.188 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:59.223 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.229 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:29:59.229 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:29:59.229 -08 000000064 INF: ===================Camera #0 Frame #17===================
17-02-28 20:29:59.231 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:29:59.231 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:29:59.231 -08 000000095 INF: ===================Camera #2 Frame #17===================
17-02-28 20:29:59.347 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.397 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:29:59.397 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:29:59.397 -08 000000064 INF: ===================Camera #0 Frame #24===================
17-02-28 20:29:59.400 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:29:59.400 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:29:59.400 -08 000000095 INF: ===================Camera #2 Frame #24===================
17-02-28 20:29:59.438 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:59.484 -08 000000108 INF: Y Motor: Unshifted Position: 5489380
17-02-28 20:29:59.498 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:59.534 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.568 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:29:59.568 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:29:59.568 -08 000000064 INF: ===================Camera #0 Frame #30===================
17-02-28 20:29:59.572 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:29:59.572 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:29:59.572 -08 000000095 INF: ===================Camera #2 Frame #30===================
17-02-28 20:29:59.659 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.736 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:29:59.736 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:29:59.736 -08 000000064 INF: ===================Camera #0 Frame #36===================
17-02-28 20:29:59.741 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:29:59.741 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:29:59.741 -08 000000095 INF: ===================Camera #2 Frame #36===================
17-02-28 20:29:59.748 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:29:59.797 -08 000000108 INF: Y Motor: Unshifted Position: 5286359
17-02-28 20:29:59.811 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:29:59.847 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:29:59.904 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:29:59.904 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:29:59.904 -08 000000064 INF: ===================Camera #0 Frame #42===================
17-02-28 20:29:59.910 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:29:59.910 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:29:59.910 -08 000000095 INF: ===================Camera #2 Frame #42===================
17-02-28 20:29:59.970 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.061 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:00.072 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:30:00.072 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:30:00.072 -08 000000064 INF: ===================Camera #0 Frame #48===================
17-02-28 20:30:00.079 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 48, frameCount = 49.
17-02-28 20:30:00.079 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 49
17-02-28 20:30:00.079 -08 000000095 INF: ===================Camera #2 Frame #49===================
17-02-28 20:30:00.109 -08 000000108 INF: Y Motor: Unshifted Position: 5083982
17-02-28 20:30:00.122 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:00.159 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.241 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:30:00.241 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:30:00.241 -08 000000064 INF: ===================Camera #0 Frame #55===================
17-02-28 20:30:00.252 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:30:00.252 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:30:00.252 -08 000000095 INF: ===================Camera #2 Frame #55===================
17-02-28 20:30:00.284 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:00.413 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:30:00.413 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:30:00.413 -08 000000064 INF: ===================Camera #0 Frame #61===================
17-02-28 20:30:00.421 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:30:00.421 -08 000000108 INF: Y Motor: Unshifted Position: 4880538
17-02-28 20:30:00.421 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:30:00.421 -08 000000095 INF: ===================Camera #2 Frame #61===================
17-02-28 20:30:00.435 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:00.471 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.582 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:30:00.582 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:30:00.582 -08 000000064 INF: ===================Camera #0 Frame #67===================
17-02-28 20:30:00.591 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 67, frameCount = 68.
17-02-28 20:30:00.591 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 68
17-02-28 20:30:00.591 -08 000000095 INF: ===================Camera #2 Frame #68===================
17-02-28 20:30:00.594 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.685 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:00.732 -08 000000108 INF: Y Motor: Unshifted Position: 4678387
17-02-28 20:30:00.746 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:00.751 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:30:00.751 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:30:00.751 -08 000000064 INF: ===================Camera #0 Frame #73===================
17-02-28 20:30:00.764 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 73, frameCount = 74.
17-02-28 20:30:00.764 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 74
17-02-28 20:30:00.764 -08 000000095 INF: ===================Camera #2 Frame #74===================
17-02-28 20:30:00.782 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.907 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:00.920 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:30:00.920 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:30:00.920 -08 000000064 INF: ===================Camera #0 Frame #80===================
17-02-28 20:30:00.933 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:30:00.933 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:30:00.933 -08 000000095 INF: ===================Camera #2 Frame #80===================
17-02-28 20:30:00.996 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:01.044 -08 000000108 INF: Y Motor: Unshifted Position: 4475139
17-02-28 20:30:01.058 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:01.092 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:30:01.092 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:30:01.092 -08 000000064 INF: ===================Camera #0 Frame #86===================
17-02-28 20:30:01.094 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:01.103 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:30:01.103 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:30:01.103 -08 000000095 INF: ===================Camera #2 Frame #86===================
17-02-28 20:30:01.220 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:01.262 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:30:01.262 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:30:01.262 -08 000000064 INF: ===================Camera #0 Frame #92===================
17-02-28 20:30:01.274 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 92, frameCount = 93.
17-02-28 20:30:01.274 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 93
17-02-28 20:30:01.274 -08 000000095 INF: ===================Camera #2 Frame #93===================
17-02-28 20:30:01.308 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:01.355 -08 000000108 INF: Y Motor: Unshifted Position: 4271691
17-02-28 20:30:01.372 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:01.405 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:01.431 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:30:01.431 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:30:01.431 -08 000000064 INF: ===================Camera #0 Frame #98===================
17-02-28 20:30:01.447 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 98, frameCount = 99.
17-02-28 20:30:01.447 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 99
17-02-28 20:30:01.447 -08 000000095 INF: ===================Camera #2 Frame #99===================
17-02-28 20:30:01.531 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:01.601 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:30:01.601 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:30:01.601 -08 000000064 INF: ===================Camera #0 Frame #105===================
17-02-28 20:30:01.617 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:30:01.617 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:30:01.617 -08 000000095 INF: ===================Camera #2 Frame #105===================
17-02-28 20:30:01.622 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:01.668 -08 000000108 INF: Y Motor: Unshifted Position: 4068890
17-02-28 20:30:01.682 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:01.718 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:01.774 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:30:01.774 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:30:01.774 -08 000000064 INF: ===================Camera #0 Frame #111===================
17-02-28 20:30:01.788 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 111, frameCount = 112.
17-02-28 20:30:01.788 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 112
17-02-28 20:30:01.788 -08 000000095 INF: ===================Camera #2 Frame #112===================
17-02-28 20:30:01.843 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:01.932 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:01.944 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:30:01.944 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:30:01.944 -08 000000064 INF: ===================Camera #0 Frame #117===================
17-02-28 20:30:01.962 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 117, frameCount = 118.
17-02-28 20:30:01.962 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 118
17-02-28 20:30:01.962 -08 000000095 INF: ===================Camera #2 Frame #118===================
17-02-28 20:30:01.981 -08 000000108 INF: Y Motor: Unshifted Position: 3865873
17-02-28 20:30:01.995 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:02.031 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.114 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:30:02.114 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:30:02.114 -08 000000064 INF: ===================Camera #0 Frame #124===================
17-02-28 20:30:02.132 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:30:02.132 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:30:02.132 -08 000000095 INF: ===================Camera #2 Frame #124===================
17-02-28 20:30:02.154 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.245 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:02.287 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:30:02.287 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:30:02.287 -08 000000064 INF: ===================Camera #0 Frame #130===================
17-02-28 20:30:02.292 -08 000000108 INF: Y Motor: Unshifted Position: 3663719
17-02-28 20:30:02.301 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 130, frameCount = 131.
17-02-28 20:30:02.301 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 131
17-02-28 20:30:02.301 -08 000000095 INF: ===================Camera #2 Frame #131===================
17-02-28 20:30:02.306 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:02.342 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.455 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:30:02.455 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:30:02.455 -08 000000064 INF: ===================Camera #0 Frame #136===================
17-02-28 20:30:02.468 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.473 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 136, frameCount = 137.
17-02-28 20:30:02.473 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 137
17-02-28 20:30:02.473 -08 000000095 INF: ===================Camera #2 Frame #137===================
17-02-28 20:30:02.556 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:02.603 -08 000000108 INF: Y Motor: Unshifted Position: 3461363
17-02-28 20:30:02.617 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:02.625 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:30:02.625 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:30:02.625 -08 000000064 INF: ===================Camera #0 Frame #142===================
17-02-28 20:30:02.644 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 142, frameCount = 143.
17-02-28 20:30:02.644 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 143
17-02-28 20:30:02.644 -08 000000095 INF: ===================Camera #2 Frame #143===================
17-02-28 20:30:02.653 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.779 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.795 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:30:02.795 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:30:02.795 -08 000000064 INF: ===================Camera #0 Frame #149===================
17-02-28 20:30:02.814 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:30:02.814 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:30:02.814 -08 000000095 INF: ===================Camera #2 Frame #149===================
17-02-28 20:30:02.867 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:02.917 -08 000000108 INF: Y Motor: Unshifted Position: 3257911
17-02-28 20:30:02.931 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:02.967 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:02.968 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:30:02.968 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:30:02.968 -08 000000064 INF: ===================Camera #0 Frame #155===================
17-02-28 20:30:02.985 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 155, frameCount = 156.
17-02-28 20:30:02.985 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 156
17-02-28 20:30:02.985 -08 000000095 INF: ===================Camera #2 Frame #156===================
17-02-28 20:30:03.092 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:03.137 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:30:03.137 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:30:03.137 -08 000000064 INF: ===================Camera #0 Frame #161===================
17-02-28 20:30:03.159 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 161, frameCount = 162.
17-02-28 20:30:03.159 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 162
17-02-28 20:30:03.159 -08 000000095 INF: ===================Camera #2 Frame #162===================
17-02-28 20:30:03.181 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:03.228 -08 000000108 INF: Y Motor: Unshifted Position: 3054897
17-02-28 20:30:03.242 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:03.278 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:03.307 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:30:03.307 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:30:03.307 -08 000000064 INF: ===================Camera #0 Frame #168===================
17-02-28 20:30:03.329 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 167, frameCount = 168.
17-02-28 20:30:03.329 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 168
17-02-28 20:30:03.329 -08 000000095 INF: ===================Camera #2 Frame #168===================
17-02-28 20:30:03.404 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:03.480 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:30:03.480 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:30:03.480 -08 000000064 INF: ===================Camera #0 Frame #174===================
17-02-28 20:30:03.492 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:03.500 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 174, frameCount = 175.
17-02-28 20:30:03.500 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 175
17-02-28 20:30:03.500 -08 000000095 INF: ===================Camera #2 Frame #175===================
17-02-28 20:30:03.539 -08 000000108 INF: Y Motor: Unshifted Position: 2853403
17-02-28 20:30:03.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:03.589 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:03.649 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:30:03.649 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:30:03.649 -08 000000064 INF: ===================Camera #0 Frame #180===================
17-02-28 20:30:03.674 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 180, frameCount = 181.
17-02-28 20:30:03.674 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 181
17-02-28 20:30:03.674 -08 000000095 INF: ===================Camera #2 Frame #181===================
17-02-28 20:30:03.715 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:03.803 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:03.819 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:30:03.819 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:30:03.819 -08 000000064 INF: ===================Camera #0 Frame #186===================
17-02-28 20:30:03.845 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 186, frameCount = 187.
17-02-28 20:30:03.845 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 187
17-02-28 20:30:03.845 -08 000000095 INF: ===================Camera #2 Frame #187===================
17-02-28 20:30:03.852 -08 000000108 INF: Y Motor: Unshifted Position: 2650603
17-02-28 20:30:03.866 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:03.902 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:03.989 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:30:03.989 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:30:03.989 -08 000000064 INF: ===================Camera #0 Frame #193===================
17-02-28 20:30:04.015 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:30:04.015 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:30:04.015 -08 000000095 INF: ===================Camera #2 Frame #194===================
17-02-28 20:30:04.027 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:04.116 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:04.162 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:30:04.162 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:30:04.162 -08 000000064 INF: ===================Camera #0 Frame #199===================
17-02-28 20:30:04.165 -08 000000108 INF: Y Motor: Unshifted Position: 2446943
17-02-28 20:30:04.179 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:04.189 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 199, frameCount = 200.
17-02-28 20:30:04.189 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 200
17-02-28 20:30:04.189 -08 000000095 INF: ===================Camera #2 Frame #200===================
17-02-28 20:30:04.215 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:04.331 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:30:04.331 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:30:04.331 -08 000000064 INF: ===================Camera #0 Frame #205===================
17-02-28 20:30:04.338 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:04.358 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 205, frameCount = 206.
17-02-28 20:30:04.358 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 206
17-02-28 20:30:04.358 -08 000000095 INF: ===================Camera #2 Frame #206===================
17-02-28 20:30:04.429 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:04.478 -08 000000108 INF: Y Motor: Unshifted Position: 2243276
17-02-28 20:30:04.490 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:04.501 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:30:04.501 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:30:04.501 -08 000000064 INF: ===================Camera #0 Frame #212===================
17-02-28 20:30:04.528 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:04.529 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:30:04.529 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:30:04.529 -08 000000095 INF: ===================Camera #2 Frame #213===================
17-02-28 20:30:04.652 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:04.674 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:30:04.674 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:30:04.674 -08 000000064 INF: ===================Camera #0 Frame #218===================
17-02-28 20:30:04.703 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:30:04.703 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:30:04.703 -08 000000095 INF: ===================Camera #2 Frame #219===================
17-02-28 20:30:04.740 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:04.789 -08 000000108 INF: Y Motor: Unshifted Position: 2041775
17-02-28 20:30:04.803 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:04.839 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:04.844 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:30:04.844 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:30:04.844 -08 000000064 INF: ===================Camera #0 Frame #224===================
17-02-28 20:30:04.874 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:30:04.874 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:30:04.874 -08 000000095 INF: ===================Camera #2 Frame #225===================
17-02-28 20:30:04.962 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.013 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:30:05.013 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:30:05.013 -08 000000064 INF: ===================Camera #0 Frame #230===================
17-02-28 20:30:05.045 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:30:05.045 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:30:05.045 -08 000000095 INF: ===================Camera #2 Frame #232===================
17-02-28 20:30:05.053 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:05.100 -08 000000108 INF: Y Motor: Unshifted Position: 1837455
17-02-28 20:30:05.114 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:05.150 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.183 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:30:05.183 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:30:05.183 -08 000000064 INF: ===================Camera #0 Frame #237===================
17-02-28 20:30:05.219 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:30:05.219 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:30:05.219 -08 000000095 INF: ===================Camera #2 Frame #238===================
17-02-28 20:30:05.275 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.356 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:30:05.356 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:30:05.356 -08 000000064 INF: ===================Camera #0 Frame #243===================
17-02-28 20:30:05.364 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:05.390 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:30:05.390 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:30:05.390 -08 000000095 INF: ===================Camera #2 Frame #244===================
17-02-28 20:30:05.412 -08 000000108 INF: Y Motor: Unshifted Position: 1634651
17-02-28 20:30:05.426 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:05.462 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.525 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:30:05.525 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:30:05.525 -08 000000064 INF: ===================Camera #0 Frame #249===================
17-02-28 20:30:05.561 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:30:05.561 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:30:05.561 -08 000000095 INF: ===================Camera #2 Frame #251===================
17-02-28 20:30:05.588 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:05.695 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:30:05.695 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:30:05.695 -08 000000064 INF: ===================Camera #0 Frame #255===================
17-02-28 20:30:05.724 -08 000000108 INF: Y Motor: Unshifted Position: 1432287
17-02-28 20:30:05.735 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:30:05.735 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:30:05.735 -08 000000095 INF: ===================Camera #2 Frame #257===================
17-02-28 20:30:05.738 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:05.774 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.864 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:30:05.864 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:30:05.864 -08 000000064 INF: ===================Camera #0 Frame #262===================
17-02-28 20:30:05.901 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:05.906 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:30:05.906 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:30:05.906 -08 000000095 INF: ===================Camera #2 Frame #263===================
17-02-28 20:30:05.988 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:06.037 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:30:06.037 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:30:06.037 -08 000000064 INF: ===================Camera #0 Frame #268===================
17-02-28 20:30:06.038 -08 000000108 INF: Y Motor: Unshifted Position: 1229467
17-02-28 20:30:06.049 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:06.077 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:30:06.077 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:30:06.077 -08 000000095 INF: ===================Camera #2 Frame #270===================
17-02-28 20:30:06.088 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:06.173 -08 000000086 INF: FPGA: Recv TDIYWAIT
17-02-28 20:30:06.173 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:06.175 -08 000000036 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:30:06.176 -08 000000083 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:30:06.176 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:30:06.176 -08 000000083 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:30:06.176 -08 000000083 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:30:06.176 -08 000000083 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:30:06.176 -08 000000083 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:30:06.176 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:30:06.176 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:30:06.176 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:30:06.177 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:30:06.206 -08 000000064 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:06.206 -08 000000064 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:06.206 -08 000000064 INF: ===================Camera #0 Frame #272===================
17-02-28 20:30:06.210 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:06.219 -08 000000064 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:06.220 -08 000000064 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:06.299 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:06.349 -08 000000108 INF: Y Motor: Unshifted Position: 1025809
17-02-28 20:30:06.363 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:06.382 -08 000000064 INF: Camera #0 ReleaseBuffer
17-02-28 20:30:06.382 -08 000000095 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:06.382 -08 000000095 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:06.382 -08 000000095 INF: ===================Camera #2 Frame #272===================
17-02-28 20:30:06.382 -08 000000064 INF: ===================Camera TDI===================
17-02-28 20:30:06.389 -08 000000095 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:06.390 -08 000000095 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:06.399 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:06.417 -08 000000064 INF: ======================================
17-02-28 20:30:06.537 -08 000000108 INF: Y Motor: Unshifted Position: 992856
17-02-28 20:30:06.537 -08 000000108 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:06.537 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:06.550 -08 000000061 INF: FPGA: Recv EX1MV
17-02-28 20:30:06.550 -08 000000061 INF: FPGA: Recv EX2MV
17-02-28 20:30:06.550 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 372.7559 ms
17-02-28 20:30:06.550 -08 000000083 INF: Excitation Filter 1: Moved 107 steps in 372.9643 ms
17-02-28 20:30:06.550 -08 000000083 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.0597 ms
17-02-28 20:30:06.550 -08 000000083 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.1285 ms
17-02-28 20:30:06.550 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.8601 ms
17-02-28 20:30:06.550 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2483 ms
17-02-28 20:30:06.550 -08 000000083 INF: ======================================
17-02-28 20:30:06.550 -08 000000078 INF: ======================================
17-02-28 20:30:06.552 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:06.553 -08 000000036 INF: ======================================
17-02-28 20:30:06.588 -08 000000095 INF: Camera #2 ReleaseBuffer
17-02-28 20:30:06.588 -08 000000095 INF: ===================Camera TDI===================
17-02-28 20:30:06.597 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:30:06.597 -08 000000108 INF: Y Motor: Moved to 14.9286 after 7862 ms
17-02-28 20:30:06.597 -08 000000108 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:06.613 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:06.623 -08 000000095 INF: ======================================
17-02-28 20:30:06.624 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:30:06.625 -08 000000091 INF: ======================================
17-02-28 20:30:06.662 -08 000000108 INF: Y Motor: Recv v 4097\r
17-02-28 20:30:06.662 -08 000000108 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:06.662 -08 000000108 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:06.676 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:06.723 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:30:06.723 -08 000000108 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:06.723 -08 000000108 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:06.785 -08 000000108 INF: Y Motor: Recv v 134217728\r
17-02-28 20:30:06.785 -08 000000108 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:30:06.785 -08 000000108 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:06.785 -08 000000108 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:06.847 -08 000000108 INF: Y Motor: Recv v 0\r
17-02-28 20:30:06.847 -08 000000108 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:06.847 -08 000000108 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:06.847 -08 000000108 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:06.910 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:30:06.910 -08 000000108 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:06.910 -08 000000108 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:06.926 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:06.972 -08 000000108 INF: Y Motor: Recv ok\r
17-02-28 20:30:06.972 -08 000000108 INF: ======================================
17-02-28 20:30:06.973 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:06.974 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:06.975 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:06.975 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:30:06.986 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:30:06.986 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:06.986 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:06.987 -08 000000018 INF: WaitCommand(5000) start
17-02-28 20:30:06.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:30:07.050 -08 000000074 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:30:07.050 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:07.111 -08 000000070 INF: FPGA: Recv TDIYERD 1492857
17-02-28 20:30:07.111 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:30:07.173 -08 000000091 INF: FPGA: Recv ZADCR 21930
17-02-28 20:30:07.173 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.084. Y moved -48.539 mm
17-02-28 20:30:07.173 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:30:07.238 -08 000000060 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:30:07.238 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:30:07.238 -08 000000042 INF: TDIScan finished after 11784.6366 ms
17-02-28 20:30:07.238 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:30:07.238 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:30:07.240 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.273 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.433 um
17-02-28 20:30:07.273 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.274 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:30:07.299 -08 000000072 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:30:07.299 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.300 -08 000000034 INF: ===================Dither Clean Up Command===================
17-02-28 20:30:07.300 -08 000000073 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:30:07.300 -08 000000087 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:30:07.300 -08 000000047 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:30:07.300 -08 000000087 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:30:07.300 -08 000000073 INF: ======================================
17-02-28 20:30:07.300 -08 000000087 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:30:07.301 -08 000000047 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:30:07.301 -08 000000047 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:30:07.301 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:07.301 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:07.302 -08 000000023 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:30:07.304 -08 000000036 INF: ===================LFT:Extracting coords===================
17-02-28 20:30:07.329 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:07.330 -08 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:30:07.331 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.331 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.331 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.331 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.331 -08 000000030 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:07.331 -08 000000100 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:07.331 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:07.331 -08 000000108 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:07.347 -08 000000047 INF: Y Motor: Recv ok\r
17-02-28 20:30:07.347 -08 000000047 INF: ======================================
17-02-28 20:30:07.361 -08 000000028 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:07.361 -08 000000028 INF: FPGA: Recv ZSEL 
17-02-28 20:30:07.361 -08 000000023 INF: FPGA: Xmit ZDACW 26464\n
17-02-28 20:30:07.361 -08 000000087 INF: ======================================
17-02-28 20:30:07.405 -08 000000100 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:07.405 -08 000000030 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:07.405 -08 000000069 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:07.405 -08 000000108 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:07.422 -08 000000071 INF: FPGA: Recv ZDACW 
17-02-28 20:30:07.422 -08 000000023 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:30:07.423 -08 000000023 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:30:07.484 -08 000000088 INF: FPGA: Recv TDIBB
17-02-28 20:30:07.484 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:07.485 -08 000000023 INF: ======================================
17-02-28 20:30:07.556 -08 000000100 INF: LFT found best fwhm score 2.000005 in 151 ms
17-02-28 20:30:07.556 -08 000000100 INF: LFT found good score at index 401 with fwhm value 2.000005. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:7,B
17-02-28 20:30:07.557 -08 000000069 INF: LFT found best fwhm score 2.000007 in 152 ms
17-02-28 20:30:07.557 -08 000000069 INF: LFT found good score at index 553 with fwhm value 2.000007. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:7,B
17-02-28 20:30:07.557 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.557 -08 000000030 INF: LFT found best fwhm score 3.402823E+38 in 152 ms
17-02-28 20:30:07.557 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.557 -08 000000030 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0809551572916931 in the next cycle, cycle 4 FC:B, C:3,L:7,B
17-02-28 20:30:07.557 -08 000000108 INF: LFT found best fwhm score 2.000112 in 151 ms
17-02-28 20:30:07.557 -08 000000108 INF: LFT found good score at index 881 with fwhm value 2.000112. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:7,B
17-02-28 20:30:07.557 -08 000000100 INF: ======================================
17-02-28 20:30:07.557 -08 000000069 INF: ======================================
17-02-28 20:30:07.557 -08 000000030 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.557 -08 000000108 INF: ===================LookupFocusTracking===================
17-02-28 20:30:07.557 -08 000000030 INF: ======================================
17-02-28 20:30:07.558 -08 000000108 INF: ======================================
17-02-28 20:30:07.559 -08 000000036 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:07.560 -08 000000036 INF: LFT weighted average best Z for bottom surface is at -0.081mm FC:B, C:3,L:7,B
17-02-28 20:30:07.560 -08 000000036 INF: ======================================
17-02-28 20:30:07.561 -08 000000034 INF: ======================================
17-02-28 20:30:07.562 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:30:07.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:30:07.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:30:07.563 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:30:07.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:30:07.564 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:30:07.565 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left, Waiting for image analysis===================
17-02-28 20:30:07.565 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 5 of 5 seconds left===================
17-02-28 20:30:07.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:30:07.565 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 1 - X = 85.21818 Y = 39.78827===================
17-02-28 20:30:07.588 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:30:07.588 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:30:07.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:30:07.589 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:07.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:30:07.589 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:30:07.589 -08 000000042 INF: Transformed XStagePosition from 86.32618 mm to 86.305479504168 mm.
17-02-28 20:30:07.601 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5772428015489 mm.
17-02-28 20:30:07.601 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3772428015489 mm.
17-02-28 20:30:07.601 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4679928015489 mm.
17-02-28 20:30:07.603 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.603 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:30:07.604 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:07.604 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.0 um, section = G_1
17-02-28 20:30:07.637 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":7,"Tile":2106,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF251","HCSMMF213","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.676 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:07.677 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:07.687 -08 000000033 INF: ===================MoveEmissionFilters===================
17-02-28 20:30:07.695 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:30:07.696 -08 000000034 INF: ===================Move X,Y, Parallel===================
17-02-28 20:30:07.699 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:07.700 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:07.700 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:07.701 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:30:07.701 -08 000000035 INF: ===================Move X Motor without settling===================
17-02-28 20:30:07.701 -08 000000039 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:30:07.701 -08 000000035 INF: X Motor: Xmit PR VM\n
17-02-28 20:30:07.702 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:07.703 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:30:07.704 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:07.705 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:07.709 -08 000000060 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:07.709 -08 000000060 INF: Y Motor: Moving to 64.5772 mm @25.000 mm/sec, started at 14.9286 mm
17-02-28 20:30:07.710 -08 000000060 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:07.710 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:07.711 -08 000000074 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:30:07.711 -08 000000102 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:07.711 -08 000000074 INF: ======================================
17-02-28 20:30:07.712 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:30:07.712 -08 000000102 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:07.712 -08 000000050 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:30:07.712 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:30:07.713 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:07.713 -08 000000047 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:30:07.713 -08 000000074 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:30:07.713 -08 000000047 INF: ======================================
17-02-28 20:30:07.713 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:07.713 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:07.714 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:07.714 -08 000000105 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:30:07.714 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:07.714 -08 000000074 INF: ======================================
17-02-28 20:30:07.714 -08 000000105 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:30:07.715 -08 000000108 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:30:07.715 -08 000000047 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:30:07.715 -08 000000050 INF: ======================================
17-02-28 20:30:07.715 -08 000000108 INF: ======================================
17-02-28 20:30:07.715 -08 000000105 INF: ======================================
17-02-28 20:30:07.715 -08 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:30:07.715 -08 000000047 INF: ======================================
17-02-28 20:30:07.716 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:30:07.716 -08 000000068 INF: ======================================
17-02-28 20:30:07.717 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:07.717 -08 000000090 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:30:07.718 -08 000000073 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:07.718 -08 000000083 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:07.718 -08 000000054 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:07.719 -08 000000073 INF: ======================================
17-02-28 20:30:07.719 -08 000000083 INF: ======================================
17-02-28 20:30:07.720 -08 000000054 INF: ======================================
17-02-28 20:30:07.742 -08 000000102 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:07.746 -08 000000102 INF: ======================================
17-02-28 20:30:07.749 -08 000000033 INF: ======================================
17-02-28 20:30:07.756 -08 000000035 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:30:07.756 -08 000000035 INF: X Motor: Xmit PR VI\n
17-02-28 20:30:07.774 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":7,"Tile":2111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF248","HCSMMF285","HCSMMF197","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.783 -08 000000061 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":7,"Tile":2113,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF179","HCSMMF263","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.784 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:30:07.784 -08 000000060 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:07.784 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:07.785 -08 000000088 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":7,"Tile":2105,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF217","HCSMMF190","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.787 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":7,"Tile":2108,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF228","HCSMMF278","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.788 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":7,"Tile":2114,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF222","HCSMMF254","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.791 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":7,"Tile":2118,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF218","HCSMMF178","HCSMMF221","HCSMMF191"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.793 -08 000000100 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":7,"Tile":2119,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF230","HCSMMF286","HCSMMF209"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.794 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":7,"Tile":2107,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF257","HCSMMF187","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.795 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":7,"Tile":2104,"Channels":["C","G","A","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF252","HCSMMF239","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.796 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":7,"Tile":2101,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF206","HCSMMF267","HCSMMF224","HCSMMF193"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.797 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":7,"Tile":2110,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF284","HCSMMF272","HCSMMF277","HCSMMF282"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.798 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":7,"Tile":2109,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF189","HCSMMF238","HCSMMF219","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.798 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":7,"Tile":2102,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF212","HCSMMF276","HCSMMF259","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.799 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":7,"Tile":2112,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF182","HCSMMF261","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.800 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":7,"Tile":2116,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF283","HCSMMF199","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.800 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":7,"Tile":2115,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF269","HCSMMF253","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.801 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":7,"Tile":2120,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF186","HCSMMF241","HCSMMF268","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.802 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":7,"Tile":2127,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF210","HCSMMF264","HCSMMF233","HCSMMF208"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.803 -08 000000108 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":7,"Tile":2124,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF273","HCSMMF246","HCSMMF225","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.804 -08 000000037 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":7,"Tile":2121,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF244","HCSMMF184","HCSMMF275"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.805 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":7,"Tile":2126,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF202","HCSMMF214","HCSMMF243","HCSMMF194"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.806 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":7,"Tile":2125,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF203","HCSMMF205","HCSMMF229"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.808 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":7,"Tile":2117,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF204","HCSMMF196","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.808 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":7,"Tile":2122,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF201","HCSMMF198","HCSMMF185"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.809 -08 000000069 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":7,"Tile":2128,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF195","HCSMMF249","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.810 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":7,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF207","HCSMMF234","HCSMMF183","HCSMMF176"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.811 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":7,"Tile":2103,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF192","HCSMMF237","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:07.813 -08 000000102 INF: FPGA: Recv ZSEL 
17-02-28 20:30:07.814 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:07.814 -08 000000090 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:30:07.815 -08 000000035 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:30:07.815 -08 000000035 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:30:07.815 -08 000000035 INF: X Motor: Moving to 86.3055 mm @15.000 mm/sec, started at 85.2036 mm
17-02-28 20:30:07.815 -08 000000035 INF: X Motor: Xmit MA 11184\n
17-02-28 20:30:07.821 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:07.827 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:30:07.846 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:30:07.846 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:07.874 -08 000000037 INF: FPGA: Recv TDIBB
17-02-28 20:30:07.874 -08 000000090 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:07.875 -08 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:30:07.876 -08 000000035 INF: X Motor: Recv MA 11184\r\n>
17-02-28 20:30:07.876 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:07.876 -08 000000035 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:30:07.877 -08 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:30:07.878 -08 000000090 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:30:07.878 -08 000000090 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:30:07.911 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:30:07.911 -08 000000060 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:07.911 -08 000000060 INF: Y Motor: Set target position to 5957724 encoder counts
17-02-28 20:30:07.911 -08 000000060 INF: Y Motor: Xmit s r0xca 5957724\r
17-02-28 20:30:07.916 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:07.916 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:30:07.937 -08 000000064 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:07.937 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:07.939 -08 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:30:07.939 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:07.941 -08 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:30:07.941 -08 000000090 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:30:07.941 -08 000000090 INF: Z Motor: Arming to move to -0.0610 mm
17-02-28 20:30:07.941 -08 000000090 INF: FPGA: Xmit ZYT 6437724 4\n
17-02-28 20:30:07.956 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:07.962 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:30:07.970 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:30:07.970 -08 000000060 INF: Y Motor: Start the move command
17-02-28 20:30:07.970 -08 000000060 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:07.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:07.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 4 of 5 seconds left===================
17-02-28 20:30:07.999 -08 000000071 INF: FPGA: Recv ZYT 
17-02-28 20:30:07.999 -08 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492856 enc / 14.929 mm / ) = 6437724 enc / 64.377 mm
17-02-28 20:30:07.999 -08 000000090 INF: FPGA: Xmit ZARM 15979\n
17-02-28 20:30:08.034 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:30:08.034 -08 000000060 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:30:08.034 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.063 -08 000000095 INF: FPGA: Recv ZARM
17-02-28 20:30:08.063 -08 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.4209 ms
17-02-28 20:30:08.063 -08 000000090 INF: Z Motor: ArmAbsStepped took 121.4262 ms
17-02-28 20:30:08.063 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:08.063 -08 000000090 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:08.064 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:30:08.066 -08 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:30:08.069 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:30:08.069 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:30:08.071 -08 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:30:08.071 -08 000000090 INF: ===================TDI Scan Setup===================
17-02-28 20:30:08.072 -08 000000090 INF: ======================================
17-02-28 20:30:08.158 -08 000000060 INF: Y Motor: Unshifted Position: 1076549
17-02-28 20:30:08.187 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:08.193 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:30:08.208 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.296 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:08.309 -08 000000029 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:30:08.309 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:30:08.309 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:08.324 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:08.326 -08 000000029 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:08.333 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.470 -08 000000060 INF: Y Motor: Unshifted Position: 1784510
17-02-28 20:30:08.500 -08 000000035 INF: X Motor: Xmit PR ER\n
17-02-28 20:30:08.520 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.563 -08 000000035 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:30:08.563 -08 000000035 INF: X Motor: Moved to 86.3047 after 686 ms
17-02-28 20:30:08.563 -08 000000035 INF: ======================================
17-02-28 20:30:08.607 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:30:08.644 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.782 -08 000000060 INF: Y Motor: Unshifted Position: 2565379
17-02-28 20:30:08.832 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.924 -08 000000029 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:30:08.924 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:30:08.927 -08 000000029 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:08.942 -08 000000029 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:08.944 -08 000000029 INF: ===================Camera Arm TDI===================
17-02-28 20:30:08.945 -08 000000029 INF: ======================================
17-02-28 20:30:08.946 -08 000000039 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:08.948 -08 000000039 INF: ======================================
17-02-28 20:30:08.956 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:08.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:08.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 3 of 5 seconds left===================
17-02-28 20:30:09.094 -08 000000060 INF: Y Motor: Unshifted Position: 3346153
17-02-28 20:30:09.144 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:09.273 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:09.406 -08 000000060 INF: Y Motor: Unshifted Position: 4131217
17-02-28 20:30:09.456 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:09.580 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:09.718 -08 000000060 INF: Y Motor: Unshifted Position: 4906172
17-02-28 20:30:09.768 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:09.895 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:09.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:09.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 2 of 5 seconds left===================
17-02-28 20:30:10.031 -08 000000060 INF: Y Motor: Unshifted Position: 5685397
17-02-28 20:30:10.081 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:10.204 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:10.343 -08 000000060 INF: Y Motor: Unshifted Position: 5957726
17-02-28 20:30:10.343 -08 000000060 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:10.343 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:10.403 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:30:10.403 -08 000000060 INF: Y Motor: Moved to 64.5773 after 2369 ms
17-02-28 20:30:10.403 -08 000000060 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:10.468 -08 000000060 INF: Y Motor: Recv v 4096\r
17-02-28 20:30:10.468 -08 000000060 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:10.468 -08 000000060 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:10.529 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:30:10.529 -08 000000060 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:10.529 -08 000000060 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:10.591 -08 000000060 INF: Y Motor: Recv v 402653184\r
17-02-28 20:30:10.591 -08 000000060 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:30:10.591 -08 000000060 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:10.591 -08 000000060 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:10.653 -08 000000060 INF: Y Motor: Recv v 0\r
17-02-28 20:30:10.653 -08 000000060 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:10.653 -08 000000060 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:10.653 -08 000000060 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:10.717 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:30:10.717 -08 000000060 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:10.717 -08 000000060 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:10.779 -08 000000060 INF: Y Motor: Recv ok\r
17-02-28 20:30:10.779 -08 000000060 INF: ======================================
17-02-28 20:30:10.780 -08 000000034 INF: ===================Move X,Y===================
17-02-28 20:30:10.781 -08 000000034 INF: ======================================
17-02-28 20:30:10.782 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:10.783 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:10.783 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:30:10.783 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:30:10.841 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:30:10.841 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:30:10.869 -08 000000108 INF: FPGA: Recv ZFREQCL
17-02-28 20:30:10.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:30:10.869 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:10.870 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:10.935 -08 000000061 INF: FPGA: Recv TDIYERD 6457725
17-02-28 20:30:10.935 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457725 counts (64.577 mm)
17-02-28 20:30:10.935 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:10.936 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:10.937 -08 000000030 INF: ===================Set YMotor gains for scans===================
17-02-28 20:30:10.937 -08 000000036 INF: ===================TDI FPGA Arm===================
17-02-28 20:30:10.937 -08 000000030 INF: ======================================
17-02-28 20:30:10.937 -08 000000036 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:10.938 -08 000000036 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:30:10.938 -08 000000036 INF: FPGA: Xmit TDIYPOS 6346799\n
17-02-28 20:30:10.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:10.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Delay 1 of 5 seconds left===================
17-02-28 20:30:10.995 -08 000000052 INF: FPGA: Recv TDIYPOS
17-02-28 20:30:10.995 -08 000000036 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:10.997 -08 000000036 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:30:10.997 -08 000000036 INF: FPGA: Xmit TDIYARM3 139264 6437724 1 1\n
17-02-28 20:30:11.057 -08 000000083 INF: FPGA: Recv TDIYARM3
17-02-28 20:30:11.057 -08 000000036 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:11.058 -08 000000036 INF: ===================TDI FPGA Arm===================
17-02-28 20:30:11.059 -08 000000036 INF: ======================================
17-02-28 20:30:11.061 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:11.061 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:11.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:11.062 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:11.063 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:11.063 -08 000000039 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:30:11.063 -08 000000106 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:30:11.063 -08 000000039 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:30:11.063 -08 000000039 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:30:11.064 -08 000000039 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:30:11.064 -08 000000039 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:30:11.064 -08 000000106 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:30:11.064 -08 000000106 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:30:11.064 -08 000000106 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:30:11.065 -08 000000106 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:30:11.433 -08 000000044 INF: FPGA: Recv EX2MV
17-02-28 20:30:11.433 -08 000000044 INF: FPGA: Recv EX1MV
17-02-28 20:30:11.433 -08 000000106 INF: Excitation Filter 1: Moved -107 steps in 369.1949 ms
17-02-28 20:30:11.433 -08 000000106 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 369.3668 ms
17-02-28 20:30:11.433 -08 000000106 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 369.4522 ms
17-02-28 20:30:11.433 -08 000000039 INF: Excitation Filter 2: Moved -107 steps in 369.3972 ms
17-02-28 20:30:11.433 -08 000000039 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.8153 ms
17-02-28 20:30:11.433 -08 000000039 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.8887 ms
17-02-28 20:30:11.433 -08 000000106 INF: ======================================
17-02-28 20:30:11.434 -08 000000039 INF: ======================================
17-02-28 20:30:11.435 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:11.436 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:11.437 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:11.437 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:30:11.437 -08 000000102 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:11.437 -08 000000037 INF: ===================FPGA Z Wait===================
17-02-28 20:30:11.437 -08 000000102 INF: Y Motor: Moving to 14.9289 mm @6.500 mm/sec, started at 64.5773 mm
17-02-28 20:30:11.438 -08 000000037 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:30:11.438 -08 000000102 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:11.438 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:11.438 -08 000000047 INF: ===================Camera TDI, Parallel===================
17-02-28 20:30:11.438 -08 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:30:11.439 -08 000000023 INF: ===================Camera TDI===================
17-02-28 20:30:11.439 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:30:11.439 -08 000000082 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:30:11.440 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:11.440 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:11.441 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:11.441 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:11.466 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:30:11.466 -08 000000102 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:11.466 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:11.528 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:30:11.528 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:11.589 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:30:11.589 -08 000000102 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:11.589 -08 000000102 INF: Y Motor: Set target position to 992891 encoder counts
17-02-28 20:30:11.589 -08 000000102 INF: Y Motor: Xmit s r0xca 992891\r
17-02-28 20:30:11.590 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:11.590 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:11.591 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:11.591 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:11.651 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:30:11.651 -08 000000102 INF: Y Motor: Start the move command
17-02-28 20:30:11.651 -08 000000102 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:11.716 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:30:11.716 -08 000000102 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:30:11.716 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:11.740 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:11.740 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:11.741 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:11.741 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:11.806 -08 000000108 INF: FPGA: Recv ZWAIT 
17-02-28 20:30:11.806 -08 000000037 INF: ======================================
17-02-28 20:30:11.839 -08 000000102 INF: Y Motor: Unshifted Position: 5894572
17-02-28 20:30:11.889 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:11.890 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:30:11.890 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:30:11.890 -08 000000023 INF: ===================Camera #2 Frame #6===================
17-02-28 20:30:11.891 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:30:11.891 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:30:11.891 -08 000000074 INF: ===================Camera #0 Frame #6===================
17-02-28 20:30:11.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:11.987 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:11.987 -08 000000018 INF: WaitCommand(5000) end
17-02-28 20:30:11.988 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:12.015 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.067 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:30:12.067 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:30:12.067 -08 000000074 INF: ===================Camera #0 Frame #12===================
17-02-28 20:30:12.068 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 11, frameCount = 12.
17-02-28 20:30:12.068 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 12
17-02-28 20:30:12.068 -08 000000023 INF: ===================Camera #2 Frame #12===================
17-02-28 20:30:12.086 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:30:12.153 -08 000000102 INF: Y Motor: Unshifted Position: 5692424
17-02-28 20:30:12.183 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:30:12.183 -08 000000018 INF: Current Position of Pump is: 13440
17-02-28 20:30:12.203 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.244 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 18, frameCount = 19.
17-02-28 20:30:12.244 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 19
17-02-28 20:30:12.244 -08 000000074 INF: ===================Camera #0 Frame #19===================
17-02-28 20:30:12.247 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 18, frameCount = 19.
17-02-28 20:30:12.247 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 19
17-02-28 20:30:12.247 -08 000000023 INF: ===================Camera #2 Frame #19===================
17-02-28 20:30:12.283 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r
17-02-28 20:30:12.326 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.370 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`13440 (0x03)\r\n(0xFF)
17-02-28 20:30:12.370 -08 000000018 INF: Current Position of Pump is: 13440
17-02-28 20:30:12.370 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3), Dispensing port PortC===================
17-02-28 20:30:12.425 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 24, frameCount = 25.
17-02-28 20:30:12.425 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 25
17-02-28 20:30:12.425 -08 000000074 INF: ===================Camera #0 Frame #25===================
17-02-28 20:30:12.428 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 25, frameCount = 26.
17-02-28 20:30:12.428 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 26
17-02-28 20:30:12.428 -08 000000023 INF: ===================Camera #2 Frame #26===================
17-02-28 20:30:12.464 -08 000000102 INF: Y Motor: Unshifted Position: 5488113
17-02-28 20:30:12.470 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V6400OD13440R\r
17-02-28 20:30:12.514 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.556 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:12.603 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 31, frameCount = 32.
17-02-28 20:30:12.603 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 32
17-02-28 20:30:12.603 -08 000000074 INF: ===================Camera #0 Frame #32===================
17-02-28 20:30:12.610 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 31, frameCount = 32.
17-02-28 20:30:12.610 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 32
17-02-28 20:30:12.610 -08 000000023 INF: ===================Camera #2 Frame #32===================
17-02-28 20:30:12.637 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.656 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:12.744 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:12.776 -08 000000102 INF: Y Motor: Unshifted Position: 5285311
17-02-28 20:30:12.785 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 38, frameCount = 39.
17-02-28 20:30:12.785 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 39
17-02-28 20:30:12.785 -08 000000074 INF: ===================Camera #0 Frame #39===================
17-02-28 20:30:12.788 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 38, frameCount = 39.
17-02-28 20:30:12.788 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 39
17-02-28 20:30:12.788 -08 000000023 INF: ===================Camera #2 Frame #39===================
17-02-28 20:30:12.826 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.949 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:12.966 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 44, frameCount = 45.
17-02-28 20:30:12.966 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 45
17-02-28 20:30:12.966 -08 000000074 INF: ===================Camera #0 Frame #45===================
17-02-28 20:30:12.971 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 45, frameCount = 46.
17-02-28 20:30:12.971 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 46
17-02-28 20:30:12.971 -08 000000023 INF: ===================Camera #2 Frame #46===================
17-02-28 20:30:12.994 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:13.055 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:13.087 -08 000000102 INF: Y Motor: Unshifted Position: 5082931
17-02-28 20:30:13.137 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:13.143 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 51, frameCount = 52.
17-02-28 20:30:13.143 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 52
17-02-28 20:30:13.143 -08 000000074 INF: ===================Camera #0 Frame #52===================
17-02-28 20:30:13.154 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 51, frameCount = 52.
17-02-28 20:30:13.154 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 52
17-02-28 20:30:13.154 -08 000000023 INF: ===================Camera #2 Frame #52===================
17-02-28 20:30:13.263 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:13.305 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:13.323 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 58, frameCount = 59.
17-02-28 20:30:13.323 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 59
17-02-28 20:30:13.323 -08 000000074 INF: ===================Camera #0 Frame #59===================
17-02-28 20:30:13.332 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 58, frameCount = 59.
17-02-28 20:30:13.332 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 59
17-02-28 20:30:13.332 -08 000000023 INF: ===================Camera #2 Frame #59===================
17-02-28 20:30:13.366 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:13.401 -08 000000102 INF: Y Motor: Unshifted Position: 4879921
17-02-28 20:30:13.451 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:13.494 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 64, frameCount = 65.
17-02-28 20:30:13.494 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 65
17-02-28 20:30:13.494 -08 000000074 INF: ===================Camera #0 Frame #65===================
17-02-28 20:30:13.512 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 64, frameCount = 65.
17-02-28 20:30:13.512 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 65
17-02-28 20:30:13.512 -08 000000023 INF: ===================Camera #2 Frame #65===================
17-02-28 20:30:13.574 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:13.616 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:13.671 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 70, frameCount = 71.
17-02-28 20:30:13.671 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 71
17-02-28 20:30:13.671 -08 000000074 INF: ===================Camera #0 Frame #71===================
17-02-28 20:30:13.678 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:13.690 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 71, frameCount = 72.
17-02-28 20:30:13.690 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 72
17-02-28 20:30:13.690 -08 000000023 INF: ===================Camera #2 Frame #72===================
17-02-28 20:30:13.713 -08 000000102 INF: Y Motor: Unshifted Position: 4676472
17-02-28 20:30:13.763 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:13.847 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 77, frameCount = 78.
17-02-28 20:30:13.847 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 78
17-02-28 20:30:13.847 -08 000000074 INF: ===================Camera #0 Frame #78===================
17-02-28 20:30:13.872 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:30:13.872 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:30:13.872 -08 000000023 INF: ===================Camera #2 Frame #79===================
17-02-28 20:30:13.886 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:13.928 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:13.993 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:14.020 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 83, frameCount = 84.
17-02-28 20:30:14.020 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 84
17-02-28 20:30:14.020 -08 000000074 INF: ===================Camera #0 Frame #84===================
17-02-28 20:30:14.024 -08 000000102 INF: Y Motor: Unshifted Position: 4473660
17-02-28 20:30:14.045 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 84, frameCount = 85.
17-02-28 20:30:14.045 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 85
17-02-28 20:30:14.045 -08 000000023 INF: ===================Camera #2 Frame #85===================
17-02-28 20:30:14.074 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:14.189 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 89, frameCount = 90.
17-02-28 20:30:14.189 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 90
17-02-28 20:30:14.189 -08 000000074 INF: ===================Camera #0 Frame #90===================
17-02-28 20:30:14.197 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:14.214 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 90, frameCount = 91.
17-02-28 20:30:14.214 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 91
17-02-28 20:30:14.214 -08 000000023 INF: ===================Camera #2 Frame #91===================
17-02-28 20:30:14.243 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:14.303 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:14.335 -08 000000102 INF: Y Motor: Unshifted Position: 4271297
17-02-28 20:30:14.359 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 96, frameCount = 97.
17-02-28 20:30:14.359 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 97
17-02-28 20:30:14.359 -08 000000074 INF: ===================Camera #0 Frame #97===================
17-02-28 20:30:14.383 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:30:14.383 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:30:14.383 -08 000000023 INF: ===================Camera #2 Frame #98===================
17-02-28 20:30:14.385 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:14.511 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:14.530 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 102, frameCount = 103.
17-02-28 20:30:14.530 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 103
17-02-28 20:30:14.530 -08 000000074 INF: ===================Camera #0 Frame #103===================
17-02-28 20:30:14.553 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:14.555 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:30:14.555 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:30:14.555 -08 000000023 INF: ===================Camera #2 Frame #104===================
17-02-28 20:30:14.614 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:14.646 -08 000000102 INF: Y Motor: Unshifted Position: 4068278
17-02-28 20:30:14.696 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:14.698 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 108, frameCount = 109.
17-02-28 20:30:14.698 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 109
17-02-28 20:30:14.698 -08 000000074 INF: ===================Camera #0 Frame #109===================
17-02-28 20:30:14.724 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 109, frameCount = 110.
17-02-28 20:30:14.724 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 110
17-02-28 20:30:14.724 -08 000000023 INF: ===================Camera #2 Frame #110===================
17-02-28 20:30:14.823 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:14.864 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:14.867 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 114, frameCount = 115.
17-02-28 20:30:14.867 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 115
17-02-28 20:30:14.867 -08 000000074 INF: ===================Camera #0 Frame #115===================
17-02-28 20:30:14.893 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 115, frameCount = 116.
17-02-28 20:30:14.893 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 116
17-02-28 20:30:14.893 -08 000000023 INF: ===================Camera #2 Frame #116===================
17-02-28 20:30:14.926 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:14.958 -08 000000102 INF: Y Motor: Unshifted Position: 3866128
17-02-28 20:30:15.008 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:15.036 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 121, frameCount = 122.
17-02-28 20:30:15.036 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 122
17-02-28 20:30:15.036 -08 000000074 INF: ===================Camera #0 Frame #122===================
17-02-28 20:30:15.062 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:30:15.062 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:30:15.062 -08 000000023 INF: ===================Camera #2 Frame #123===================
17-02-28 20:30:15.134 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:15.176 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:15.207 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 127, frameCount = 128.
17-02-28 20:30:15.207 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 128
17-02-28 20:30:15.207 -08 000000074 INF: ===================Camera #0 Frame #128===================
17-02-28 20:30:15.235 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:30:15.235 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:30:15.235 -08 000000023 INF: ===================Camera #2 Frame #129===================
17-02-28 20:30:15.240 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:30:15.240 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Pumping Reagent HSM (3)===================
17-02-28 20:30:15.240 -08 000000018 INF: KloehnPump A (KLOEHNA): Waiting 1000 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-02-28 20:30:15.273 -08 000000102 INF: Y Motor: Unshifted Position: 3660505
17-02-28 20:30:15.323 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:15.376 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 133, frameCount = 134.
17-02-28 20:30:15.376 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 134
17-02-28 20:30:15.376 -08 000000074 INF: ===================Camera #0 Frame #134===================
17-02-28 20:30:15.404 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 134, frameCount = 135.
17-02-28 20:30:15.404 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 135
17-02-28 20:30:15.404 -08 000000023 INF: ===================Camera #2 Frame #135===================
17-02-28 20:30:15.445 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:15.545 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 139, frameCount = 140.
17-02-28 20:30:15.545 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 140
17-02-28 20:30:15.545 -08 000000074 INF: ===================Camera #0 Frame #140===================
17-02-28 20:30:15.573 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 140, frameCount = 141.
17-02-28 20:30:15.573 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 141
17-02-28 20:30:15.573 -08 000000023 INF: ===================Camera #2 Frame #141===================
17-02-28 20:30:15.583 -08 000000102 INF: Y Motor: Unshifted Position: 3459656
17-02-28 20:30:15.633 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:15.713 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 146, frameCount = 147.
17-02-28 20:30:15.713 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 147
17-02-28 20:30:15.713 -08 000000074 INF: ===================Camera #0 Frame #147===================
17-02-28 20:30:15.742 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:30:15.742 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:30:15.742 -08 000000023 INF: ===================Camera #2 Frame #148===================
17-02-28 20:30:15.757 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:15.884 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 152, frameCount = 153.
17-02-28 20:30:15.884 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 153
17-02-28 20:30:15.884 -08 000000074 INF: ===================Camera #0 Frame #153===================
17-02-28 20:30:15.895 -08 000000102 INF: Y Motor: Unshifted Position: 3255991
17-02-28 20:30:15.914 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:30:15.914 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:30:15.914 -08 000000023 INF: ===================Camera #2 Frame #154===================
17-02-28 20:30:15.945 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.053 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 158, frameCount = 159.
17-02-28 20:30:16.053 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 159
17-02-28 20:30:16.053 -08 000000074 INF: ===================Camera #0 Frame #159===================
17-02-28 20:30:16.071 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.083 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 159, frameCount = 160.
17-02-28 20:30:16.083 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 160
17-02-28 20:30:16.083 -08 000000023 INF: ===================Camera #2 Frame #160===================
17-02-28 20:30:16.206 -08 000000102 INF: Y Motor: Unshifted Position: 3054501
17-02-28 20:30:16.221 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 164, frameCount = 165.
17-02-28 20:30:16.221 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 165
17-02-28 20:30:16.221 -08 000000074 INF: ===================Camera #0 Frame #165===================
17-02-28 20:30:16.252 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 165, frameCount = 166.
17-02-28 20:30:16.252 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 166
17-02-28 20:30:16.252 -08 000000023 INF: ===================Camera #2 Frame #166===================
17-02-28 20:30:16.256 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.341 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r
17-02-28 20:30:16.383 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.390 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 170, frameCount = 171.
17-02-28 20:30:16.390 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 171
17-02-28 20:30:16.390 -08 000000074 INF: ===================Camera #0 Frame #171===================
17-02-28 20:30:16.422 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:30:16.422 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:30:16.422 -08 000000023 INF: ===================Camera #2 Frame #173===================
17-02-28 20:30:16.427 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:16.521 -08 000000102 INF: Y Motor: Unshifted Position: 2850187
17-02-28 20:30:16.527 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:16.558 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 177, frameCount = 178.
17-02-28 20:30:16.558 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 178
17-02-28 20:30:16.558 -08 000000074 INF: ===================Camera #0 Frame #178===================
17-02-28 20:30:16.571 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.594 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:30:16.594 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:30:16.594 -08 000000023 INF: ===================Camera #2 Frame #179===================
17-02-28 20:30:16.612 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF)
17-02-28 20:30:16.694 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.729 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 183, frameCount = 184.
17-02-28 20:30:16.729 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 184
17-02-28 20:30:16.729 -08 000000074 INF: ===================Camera #0 Frame #184===================
17-02-28 20:30:16.763 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 184, frameCount = 185.
17-02-28 20:30:16.763 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 185
17-02-28 20:30:16.763 -08 000000023 INF: ===================Camera #2 Frame #185===================
17-02-28 20:30:16.833 -08 000000102 INF: Y Motor: Unshifted Position: 2647388
17-02-28 20:30:16.862 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r
17-02-28 20:30:16.883 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:16.897 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 189, frameCount = 190.
17-02-28 20:30:16.897 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 190
17-02-28 20:30:16.897 -08 000000074 INF: ===================Camera #0 Frame #190===================
17-02-28 20:30:16.924 -08 000000018 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF)
17-02-28 20:30:16.924 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:16.924 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Closing shutoff valve===================
17-02-28 20:30:16.932 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 190, frameCount = 191.
17-02-28 20:30:16.932 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 191
17-02-28 20:30:16.932 -08 000000023 INF: ===================Camera #2 Frame #191===================
17-02-28 20:30:17.006 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.065 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 195, frameCount = 196.
17-02-28 20:30:17.065 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 196
17-02-28 20:30:17.065 -08 000000074 INF: ===================Camera #0 Frame #196===================
17-02-28 20:30:17.100 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:30:17.100 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:30:17.100 -08 000000023 INF: ===================Camera #2 Frame #198===================
17-02-28 20:30:17.144 -08 000000102 INF: Y Motor: Unshifted Position: 2445026
17-02-28 20:30:17.194 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.233 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 201, frameCount = 202.
17-02-28 20:30:17.233 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 202
17-02-28 20:30:17.233 -08 000000074 INF: ===================Camera #0 Frame #202===================
17-02-28 20:30:17.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:17.267 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:17.268 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:17.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:30:17.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:30:17.269 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°, FC temperature to 20°===================
17-02-28 20:30:17.272 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 203, frameCount = 204.
17-02-28 20:30:17.272 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 204
17-02-28 20:30:17.272 -08 000000023 INF: ===================Camera #2 Frame #204===================
17-02-28 20:30:17.320 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.401 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 208, frameCount = 209.
17-02-28 20:30:17.401 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 209
17-02-28 20:30:17.401 -08 000000074 INF: ===================Camera #0 Frame #209===================
17-02-28 20:30:17.441 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 209, frameCount = 210.
17-02-28 20:30:17.441 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 210
17-02-28 20:30:17.441 -08 000000023 INF: ===================Camera #2 Frame #210===================
17-02-28 20:30:17.456 -08 000000102 INF: Y Motor: Unshifted Position: 2242876
17-02-28 20:30:17.506 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.513 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:30:17.514 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:30:17.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:30:17.515 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry, Flowcell Temp 20°===================
17-02-28 20:30:17.516 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:17.516 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:17.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Resuming Chemistry===================
17-02-28 20:30:17.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:17.517 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:17.518 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module...===================
17-02-28 20:30:17.572 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 214, frameCount = 215.
17-02-28 20:30:17.572 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 215
17-02-28 20:30:17.572 -08 000000074 INF: ===================Camera #0 Frame #215===================
17-02-28 20:30:17.610 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 215, frameCount = 216.
17-02-28 20:30:17.610 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 216
17-02-28 20:30:17.610 -08 000000023 INF: ===================Camera #2 Frame #216===================
17-02-28 20:30:17.631 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.740 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 220, frameCount = 221.
17-02-28 20:30:17.740 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 221
17-02-28 20:30:17.740 -08 000000074 INF: ===================Camera #0 Frame #221===================
17-02-28 20:30:17.769 -08 000000102 INF: Y Motor: Unshifted Position: 2038555
17-02-28 20:30:17.779 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:30:17.779 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:30:17.779 -08 000000023 INF: ===================Camera #2 Frame #223===================
17-02-28 20:30:17.819 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.908 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 226, frameCount = 227.
17-02-28 20:30:17.908 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 227
17-02-28 20:30:17.908 -08 000000074 INF: ===================Camera #0 Frame #227===================
17-02-28 20:30:17.944 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:17.951 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 228, frameCount = 229.
17-02-28 20:30:17.951 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 229
17-02-28 20:30:17.951 -08 000000023 INF: ===================Camera #2 Frame #229===================
17-02-28 20:30:18.076 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 232, frameCount = 233.
17-02-28 20:30:18.076 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 233
17-02-28 20:30:18.076 -08 000000074 INF: ===================Camera #0 Frame #233===================
17-02-28 20:30:18.079 -08 000000102 INF: Y Motor: Unshifted Position: 1837049
17-02-28 20:30:18.120 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 234, frameCount = 235.
17-02-28 20:30:18.120 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 235
17-02-28 20:30:18.120 -08 000000023 INF: ===================Camera #2 Frame #235===================
17-02-28 20:30:18.129 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:18.244 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 239, frameCount = 240.
17-02-28 20:30:18.244 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 240
17-02-28 20:30:18.244 -08 000000074 INF: ===================Camera #0 Frame #240===================
17-02-28 20:30:18.255 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:18.289 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 240, frameCount = 241.
17-02-28 20:30:18.289 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 241
17-02-28 20:30:18.289 -08 000000023 INF: ===================Camera #2 Frame #241===================
17-02-28 20:30:18.393 -08 000000102 INF: Y Motor: Unshifted Position: 1632733
17-02-28 20:30:18.415 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 245, frameCount = 246.
17-02-28 20:30:18.415 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 246
17-02-28 20:30:18.415 -08 000000074 INF: ===================Camera #0 Frame #246===================
17-02-28 20:30:18.443 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:18.458 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 247, frameCount = 248.
17-02-28 20:30:18.458 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 248
17-02-28 20:30:18.458 -08 000000023 INF: ===================Camera #2 Frame #248===================
17-02-28 20:30:18.566 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:18.583 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 251, frameCount = 252.
17-02-28 20:30:18.583 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 252
17-02-28 20:30:18.583 -08 000000074 INF: ===================Camera #0 Frame #252===================
17-02-28 20:30:18.630 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 253, frameCount = 254.
17-02-28 20:30:18.630 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 254
17-02-28 20:30:18.630 -08 000000023 INF: ===================Camera #2 Frame #254===================
17-02-28 20:30:18.704 -08 000000102 INF: Y Motor: Unshifted Position: 1430584
17-02-28 20:30:18.751 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 257, frameCount = 258.
17-02-28 20:30:18.751 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 258
17-02-28 20:30:18.751 -08 000000074 INF: ===================Camera #0 Frame #258===================
17-02-28 20:30:18.754 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:18.799 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 259, frameCount = 260.
17-02-28 20:30:18.799 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 260
17-02-28 20:30:18.799 -08 000000023 INF: ===================Camera #2 Frame #260===================
17-02-28 20:30:18.880 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:18.920 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 264, frameCount = 265.
17-02-28 20:30:18.920 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 265
17-02-28 20:30:18.920 -08 000000074 INF: ===================Camera #0 Frame #265===================
17-02-28 20:30:18.969 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 265, frameCount = 266.
17-02-28 20:30:18.969 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 266
17-02-28 20:30:18.969 -08 000000023 INF: ===================Camera #2 Frame #266===================
17-02-28 20:30:19.015 -08 000000102 INF: Y Motor: Unshifted Position: 1228204
17-02-28 20:30:19.065 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:19.093 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 270, frameCount = 271.
17-02-28 20:30:19.093 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 271
17-02-28 20:30:19.093 -08 000000074 INF: ===================Camera #0 Frame #271===================
17-02-28 20:30:19.140 -08 000000023 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:19.140 -08 000000023 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:19.140 -08 000000023 INF: ===================Camera #2 Frame #272===================
17-02-28 20:30:19.161 -08 000000023 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:19.162 -08 000000023 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:19.170 -08 000000086 INF: FPGA: Recv TDIYWAIT
17-02-28 20:30:19.170 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:19.172 -08 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:30:19.172 -08 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:30:19.172 -08 000000068 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:30:19.173 -08 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:30:19.173 -08 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:30:19.173 -08 000000058 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:30:19.173 -08 000000068 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:30:19.173 -08 000000068 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:30:19.173 -08 000000068 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:30:19.173 -08 000000058 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:30:19.174 -08 000000068 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:30:19.191 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:19.329 -08 000000102 INF: Y Motor: Unshifted Position: 1024115
17-02-28 20:30:19.330 -08 000000023 INF: Camera #2 ReleaseBuffer
17-02-28 20:30:19.330 -08 000000074 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:19.330 -08 000000074 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:19.330 -08 000000074 INF: ===================Camera #0 Frame #272===================
17-02-28 20:30:19.330 -08 000000023 INF: ===================Camera TDI===================
17-02-28 20:30:19.333 -08 000000074 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:19.334 -08 000000074 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:19.366 -08 000000023 INF: ======================================
17-02-28 20:30:19.379 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:19.469 -08 000000074 INF: Camera #0 ReleaseBuffer
17-02-28 20:30:19.469 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:30:19.500 -08 000000074 INF: ======================================
17-02-28 20:30:19.501 -08 000000047 INF: ===================Camera TDI===================
17-02-28 20:30:19.502 -08 000000047 INF: ======================================
17-02-28 20:30:19.514 -08 000000102 INF: Y Motor: Unshifted Position: 992892
17-02-28 20:30:19.514 -08 000000102 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:19.514 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:19.545 -08 000000086 INF: FPGA: Recv EX1MV
17-02-28 20:30:19.545 -08 000000086 INF: FPGA: Recv EX2MV
17-02-28 20:30:19.545 -08 000000068 INF: Excitation Filter 2: Moved 107 steps in 371.9937 ms
17-02-28 20:30:19.545 -08 000000058 INF: Excitation Filter 1: Moved 107 steps in 372.1674 ms
17-02-28 20:30:19.545 -08 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 372.2674 ms
17-02-28 20:30:19.545 -08 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 372.3727 ms
17-02-28 20:30:19.545 -08 000000068 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 372.1031 ms
17-02-28 20:30:19.545 -08 000000068 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.5016 ms
17-02-28 20:30:19.545 -08 000000058 INF: ======================================
17-02-28 20:30:19.546 -08 000000068 INF: ======================================
17-02-28 20:30:19.546 -08 000000082 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:19.548 -08 000000082 INF: ======================================
17-02-28 20:30:19.578 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:30:19.578 -08 000000102 INF: Y Motor: Moved to 14.9289 after 7861 ms
17-02-28 20:30:19.578 -08 000000102 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:19.643 -08 000000102 INF: Y Motor: Recv v 4097\r
17-02-28 20:30:19.643 -08 000000102 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:19.643 -08 000000102 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:19.704 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:30:19.704 -08 000000102 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:19.704 -08 000000102 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:19.769 -08 000000102 INF: Y Motor: Recv v 134217728\r
17-02-28 20:30:19.769 -08 000000102 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:30:19.769 -08 000000102 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:19.769 -08 000000102 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:19.826 -08 000000102 INF: Y Motor: Recv v 0\r
17-02-28 20:30:19.826 -08 000000102 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:19.826 -08 000000102 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:19.826 -08 000000102 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:19.890 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:30:19.890 -08 000000102 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:19.890 -08 000000102 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:19.952 -08 000000102 INF: Y Motor: Recv ok\r
17-02-28 20:30:19.952 -08 000000102 INF: ======================================
17-02-28 20:30:19.953 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:19.954 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:19.955 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:19.955 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:30:19.981 -08 000000071 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:30:19.981 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:20.045 -08 000000105 INF: FPGA: Recv TDIYERD 1492892
17-02-28 20:30:20.045 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:30:20.107 -08 000000091 INF: FPGA: Recv ZADCR 22033
17-02-28 20:30:20.107 -08 000000042 INF: At scan end Y pos = 14.929 and Z pos = -0.085. Y moved -48.539 mm
17-02-28 20:30:20.107 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:30:20.168 -08 000000098 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:30:20.168 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:30:20.168 -08 000000042 INF: TDIScan finished after 12578.3501 ms
17-02-28 20:30:20.168 -08 000000042 INF: Image[0]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:30:20.168 -08 000000042 INF: Image[2]: Y should trigger at 63.468 mm, 2nd row was at 64.377 mm (error = 0.909 mm)
17-02-28 20:30:20.170 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.207 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.654 um
17-02-28 20:30:20.207 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.208 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:30:20.230 -08 000000047 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:30:20.230 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.231 -08 000000051 INF: ===================Dither Clean Up Command===================
17-02-28 20:30:20.231 -08 000000086 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:30:20.231 -08 000000083 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:30:20.231 -08 000000108 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:30:20.232 -08 000000083 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:30:20.232 -08 000000086 INF: ======================================
17-02-28 20:30:20.232 -08 000000083 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:30:20.232 -08 000000108 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:30:20.232 -08 000000108 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:30:20.232 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:20.232 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:20.233 -08 000000073 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:30:20.235 -08 000000029 INF: ===================LFT:Extracting coords===================
17-02-28 20:30:20.260 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:20.261 -08 000000029 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:30:20.262 -08 000000099 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.262 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.262 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.262 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.262 -08 000000099 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:20.262 -08 000000100 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:20.262 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:20.263 -08 000000083 INF: Y Motor: Recv ok\r
17-02-28 20:30:20.263 -08 000000098 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:20.263 -08 000000083 INF: ======================================
17-02-28 20:30:20.292 -08 000000104 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:20.292 -08 000000104 INF: FPGA: Recv ZSEL 
17-02-28 20:30:20.292 -08 000000073 INF: FPGA: Xmit ZDACW 26464\n
17-02-28 20:30:20.292 -08 000000108 INF: ======================================
17-02-28 20:30:20.336 -08 000000100 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:20.337 -08 000000032 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:20.337 -08 000000099 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:20.337 -08 000000098 INF: FC:B, C:3,L:7, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:20.356 -08 000000068 INF: FPGA: Recv ZDACW 
17-02-28 20:30:20.357 -08 000000073 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:30:20.357 -08 000000073 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:30:20.418 -08 000000034 INF: FPGA: Recv TDIBB
17-02-28 20:30:20.418 -08 000000073 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:20.419 -08 000000073 INF: ======================================
17-02-28 20:30:20.488 -08 000000100 INF: LFT found best fwhm score 2.001667 in 151 ms
17-02-28 20:30:20.488 -08 000000100 INF: LFT found good score at index 1145 with fwhm value 2.001667. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:7,B
17-02-28 20:30:20.488 -08 000000032 INF: LFT found best fwhm score 2.000025 in 151 ms
17-02-28 20:30:20.488 -08 000000032 INF: LFT found good score at index 2801 with fwhm value 2.000025. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:7,B
17-02-28 20:30:20.488 -08 000000100 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.488 -08 000000098 INF: LFT found best fwhm score 2.000887 in 151 ms
17-02-28 20:30:20.488 -08 000000098 INF: LFT found good score at index 1149 with fwhm value 2.000887. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:7,B
17-02-28 20:30:20.488 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.488 -08 000000099 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:30:20.488 -08 000000099 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0806244383857372 in the next cycle, cycle 4 FC:B, C:3,L:7,B
17-02-28 20:30:20.488 -08 000000098 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.488 -08 000000100 INF: ======================================
17-02-28 20:30:20.488 -08 000000032 INF: ======================================
17-02-28 20:30:20.488 -08 000000099 INF: ===================LookupFocusTracking===================
17-02-28 20:30:20.489 -08 000000098 INF: ======================================
17-02-28 20:30:20.489 -08 000000099 INF: ======================================
17-02-28 20:30:20.490 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:20.491 -08 000000029 INF: LFT weighted average best Z for bottom surface is at -0.080mm FC:B, C:3,L:7,B
17-02-28 20:30:20.491 -08 000000029 INF: ======================================
17-02-28 20:30:20.492 -08 000000051 INF: ======================================
17-02-28 20:30:20.493 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:30:20.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:30:20.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:30:20.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:30:20.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:20.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:30:20.496 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:30:20.497 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:30:20.497 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module...===================
17-02-28 20:30:20.497 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:30:20.497 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7, Swath 2 - X = 86.32618 Y = 39.78827===================
17-02-28 20:30:20.523 -08 000000042 INF: Waited 26 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:30:20.523 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:30:20.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:30:20.524 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:20.524 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:30:20.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 7===================
17-02-28 20:30:20.525 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:30:20.566 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":7,"Tile":2201,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF237","HCSMMF255","HCSMMF258","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.621 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:20.660 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:20.660 -08 000000042 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:30:20.660 -08 000000042 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:30:20.708 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":7,"Tile":2202,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF192","HCSMMF185","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.710 -08 000000099 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":7,"Tile":2212,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF240","HCSMMF197","HCSMMF248","HCSMMF222"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.711 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":7,"Tile":2211,"Channels":["C","G","T","A"],"MemoryMappedFileNames":["HCSMMF286","HCSMMF230","HCSMMF190","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.718 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":7,"Tile":2204,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF227","HCSMMF271","HCSMMF264"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.721 -08 000000105 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":7,"Tile":2203,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF208","HCSMMF198","HCSMMF181"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.723 -08 000000068 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":7,"Tile":2208,"Channels":["C","T","G","A"],"MemoryMappedFileNames":["HCSMMF246","HCSMMF279","HCSMMF189","HCSMMF262"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.724 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":7,"Tile":2209,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF196","HCSMMF231","HCSMMF219"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.725 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":7,"Tile":2214,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF260","HCSMMF191","HCSMMF272","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.726 -08 000000077 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":7,"Tile":2206,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF195","HCSMMF247","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.727 -08 000000106 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":7,"Tile":2213,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF254","HCSMMF202","HCSMMF221"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.727 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":7,"Tile":2215,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF282","HCSMMF193","HCSMMF206","HCSMMF284"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.728 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":7,"Tile":2216,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF277","HCSMMF194","HCSMMF214","HCSMMF216"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.729 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":7,"Tile":2207,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF209","HCSMMF210","HCSMMF217","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.730 -08 000000086 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":7,"Tile":2221,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF253","HCSMMF269","HCSMMF212","HCSMMF232"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.731 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":7,"Tile":2227,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF283","HCSMMF263","HCSMMF179","HCSMMF265"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.732 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":7,"Tile":2228,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF188","HCSMMF187","HCSMMF229","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.732 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":7,"Tile":2223,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF281","HCSMMF200","HCSMMF280","HCSMMF244"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.733 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":7,"Tile":2217,"Channels":["G","C","T","A"],"MemoryMappedFileNames":["HCSMMF243","HCSMMF267","HCSMMF224","HCSMMF178"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.734 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":7,"Tile":2219,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF199","HCSMMF259","HCSMMF211","HCSMMF184"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.735 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":7,"Tile":2210,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF285","HCSMMF226","HCSMMF242"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.736 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":7,"Tile":2222,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF287","HCSMMF186","HCSMMF239"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.736 -08 000000036 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":7,"Tile":2205,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF249","HCSMMF225","HCSMMF245"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.737 -08 000000029 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":7,"Tile":2225,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF213","HCSMMF268","HCSMMF256"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.738 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":7,"Tile":2226,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF251","HCSMMF275","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.739 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":7,"Tile":2224,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF177","HCSMMF236","HCSMMF205","HCSMMF223"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.740 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":7,"Tile":2218,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF278","HCSMMF241","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.741 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 7 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":7,"Tile":2220,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF261","HCSMMF250","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:20.747 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:30:20.747 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:20.747 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:30:20.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:20.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:20.749 -08 000000050 INF: ===================Move Tilt Motor 1===================
17-02-28 20:30:20.749 -08 000000073 INF: ===================Move Tilt Motor 2===================
17-02-28 20:30:20.749 -08 000000079 INF: ===================Move Tilt Motor 3===================
17-02-28 20:30:20.749 -08 000000050 INF: Tilt Motor 1: Moving to 4.9785 mm, started at 5.0005 mm, delta = -0.0220 mm
17-02-28 20:30:20.749 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:30:20.749 -08 000000073 INF: Tilt Motor 2: Moving to 5.4532 mm, started at 5.3924 mm, delta = 0.0608 mm
17-02-28 20:30:20.749 -08 000000079 INF: Tilt Motor 3: Moving to 5.3996 mm, started at 5.3393 mm, delta = 0.0603 mm
17-02-28 20:30:20.752 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:20.752 -08 000000073 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:20.753 -08 000000079 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:20.832 -08 000000069 INF: FPGA: Recv T1RD 19687
17-02-28 20:30:20.832 -08 000000069 INF: FPGA: Recv T2RD 21229
17-02-28 20:30:20.832 -08 000000069 INF: FPGA: Recv T3RD 21019
17-02-28 20:30:20.832 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3281 + 1/6
17-02-28 20:30:20.832 -08 000000050 INF: Tilt Motor 1: Moving to 19600 encoder counts
17-02-28 20:30:20.832 -08 000000050 INF: FPGA: Xmit T1MOVETO 19600\n
17-02-28 20:30:20.832 -08 000000073 INF: Tilt Motor 2: Encoder: at motor step 3538 + 1/6
17-02-28 20:30:20.832 -08 000000073 INF: Tilt Motor 2: Moving to 21469 encoder counts
17-02-28 20:30:20.832 -08 000000079 INF: Tilt Motor 3: Encoder: at motor step 3503 + 1/6
17-02-28 20:30:20.832 -08 000000079 INF: Tilt Motor 3: Moving to 21258 encoder counts
17-02-28 20:30:20.833 -08 000000079 INF: FPGA: Xmit T3MOVETO 21258\n
17-02-28 20:30:20.834 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:30:20.835 -08 000000073 INF: FPGA: Xmit T2MOVETO 21469\n
17-02-28 20:30:20.923 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:20.923 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:30:20.950 -08 000000088 INF: FPGA: Recv T1MOVETO 14
17-02-28 20:30:20.950 -08 000000050 INF: Tilt Motor 1: To move from 5.000 to 4.978 (-0.022 mm) should take 14 steps, but required 14 steps (0.021 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:30:20.950 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:30:20.960 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:20.965 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:30:21.015 -08 000000056 INF: FPGA: Recv T1RD 19603
17-02-28 20:30:21.015 -08 000000056 INF: FPGA: Recv T3MOVETO 39
17-02-28 20:30:21.015 -08 000000056 INF: FPGA: Recv T2MOVETO 39
17-02-28 20:30:21.015 -08 000000073 INF: Tilt Motor 2: To move from 5.392 to 5.453 (0.061 mm) should take 40 steps, but required 39 steps (0.059 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:30:21.015 -08 000000079 INF: Tilt Motor 3: To move from 5.339 to 5.400 (0.060 mm) should take 40 steps, but required 39 steps (0.059 mm). Slippage = -0.002 mm (-0.03%)
17-02-28 20:30:21.015 -08 000000073 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:21.015 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3267 + 1/6
17-02-28 20:30:21.016 -08 000000079 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:21.018 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:30:21.054 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:21.060 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:30:21.072 -08 000000105 INF: FPGA: Recv T2RD 21464
17-02-28 20:30:21.072 -08 000000105 INF: FPGA: Recv T3RD 21255
17-02-28 20:30:21.072 -08 000000105 INF: FPGA: Recv T1RD 19603
17-02-28 20:30:21.072 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3267 + 1/6
17-02-28 20:30:21.072 -08 000000050 INF: FPGA: Xmit T1RD\n
17-02-28 20:30:21.072 -08 000000079 INF: Tilt Motor 3: Encoder: at motor step 3542 + 3/6
17-02-28 20:30:21.072 -08 000000073 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:30:21.073 -08 000000073 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:21.075 -08 000000079 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:21.138 -08 000000033 INF: FPGA: Recv T1RD 19603
17-02-28 20:30:21.138 -08 000000033 INF: FPGA: Recv T2RD 21464
17-02-28 20:30:21.138 -08 000000033 INF: FPGA: Recv T3RD 21255
17-02-28 20:30:21.138 -08 000000079 INF: Tilt Motor 3: Encoder: at motor step 3542 + 3/6
17-02-28 20:30:21.138 -08 000000050 INF: Tilt Motor 1: Encoder: at motor step 3267 + 1/6
17-02-28 20:30:21.138 -08 000000050 INF: Tilt Motor 1: After move to 4.9785, error = 0.0007, min/max error = -0.0013/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:21.138 -08 000000050 INF: Tilt Motor 1: Moved to 4.9792 after 389.0475 ms
17-02-28 20:30:21.138 -08 000000073 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:30:21.138 -08 000000079 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:21.139 -08 000000050 INF: ======================================
17-02-28 20:30:21.141 -08 000000073 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:21.153 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:21.159 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:30:21.198 -08 000000088 INF: FPGA: Recv T3RD 21255
17-02-28 20:30:21.198 -08 000000088 INF: FPGA: Recv T2RD 21464
17-02-28 20:30:21.198 -08 000000079 INF: Tilt Motor 3: Encoder: at motor step 3542 + 3/6
17-02-28 20:30:21.198 -08 000000079 INF: Tilt Motor 3: After move to 5.3996, error = -0.0008, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:21.198 -08 000000079 INF: Tilt Motor 3: Moved to 5.3988 after 448.6375 ms
17-02-28 20:30:21.198 -08 000000073 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:30:21.198 -08 000000073 INF: Tilt Motor 2: After move to 5.4532, error = -0.0013, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:21.198 -08 000000073 INF: Tilt Motor 2: Moved to 5.4519 after 448.9785 ms
17-02-28 20:30:21.198 -08 000000079 INF: ======================================
17-02-28 20:30:21.199 -08 000000073 INF: ======================================
17-02-28 20:30:21.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:21.200 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:21.201 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97847296731801, m2=5.45318979375872, m3=5.39959579375872
17-02-28 20:30:21.207 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:30:21.216 -08 000000042 INF: Transformed StartingYStagePosition from 40.4930030822754 mm to 40.4930030822754 mm.
17-02-28 20:30:21.216 -08 000000042 INF: Transformed StartingYStageITFPosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:30:21.216 -08 000000042 INF: Transformed TriggerYStagePosition from 40.2930030822754 mm to 40.2930030822754 mm.
17-02-28 20:30:21.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:21.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:21.220 -08 000000042 INF: AutoFocus Z params:startMotor=-0.23,startAquire=-0.23,stopMotor=-0.01,triggerDelta=0
17-02-28 20:30:21.220 -08 000000042 INF: Z Motor: Set Z velocity to 5.000 mm/s / 6442353 16.16 format
17-02-28 20:30:21.220 -08 000000042 INF: FPGA: Xmit ZSTEP 6442353\n
17-02-28 20:30:21.262 -08 000000028 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:21.262 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:21.263 -08 000000042 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:30:21.263 -08 000000042 INF: Z Motor: Moving to -0.2300 mm, started at -0.1010 mm
17-02-28 20:30:21.263 -08 000000042 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:30:21.324 -08 000000035 INF: FPGA: Recv ZTRG 
17-02-28 20:30:21.324 -08 000000042 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:30:21.335 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:21.386 -08 000000037 INF: FPGA: Recv ZYT 
17-02-28 20:30:21.386 -08 000000042 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:30:21.386 -08 000000042 INF: FPGA: Xmit ZMV 60292\n
17-02-28 20:30:21.450 -08 000000098 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:30:21.451 -08 000000098 INF: FPGA: Recv ZMV 
17-02-28 20:30:21.451 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:30:21.451 -08 000000042 INF: Z Motor: MoveAndTrigger 'ZMV' command took 64.6975 ms
17-02-28 20:30:21.451 -08 000000042 INF: FPGA: Xmit ZDACR\n
17-02-28 20:30:21.510 -08 000000058 INF: FPGA: Recv ZDACR 60292
17-02-28 20:30:21.510 -08 000000042 INF: Z Motor: MoveAndTrigger took 247.4604 ms w/comms
17-02-28 20:30:21.510 -08 000000042 INF: Z Motor: After move to -0.2300, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:21.510 -08 000000042 INF: Z Motor: MoveAbsStepped took 247.6311 ms
17-02-28 20:30:21.511 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:21.511 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:30:21.520 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:30:21.520 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:30:21.520 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:30:21.520 -08 000000042 INF: Z Motor: Set Z velocity to 0.312 mm/s / 401506 16.16 format
17-02-28 20:30:21.520 -08 000000042 INF: FPGA: Xmit ZSTEP 401506\n
17-02-28 20:30:21.574 -08 000000039 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:21.585 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:21.585 -08 000000042 INF: Transformed XStagePosition from 88.54063 mm to 88.5406341552734 mm.
17-02-28 20:30:21.594 -08 000000042 INF: Transformed StartingYStagePosition from 64.5335113525391 mm to 64.5335113525391 mm.
17-02-28 20:30:21.594 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:30:21.594 -08 000000042 INF: Transformed TriggerYStagePosition from 64.3335113525391 mm to 64.3335113525391 mm.
17-02-28 20:30:21.596 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:21.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Populating image tags===================
17-02-28 20:30:21.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:21.597 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 1.5 mm/sec, clearing lines = 66, image lines = 3072, channels = A, G, T, C, TDI Z = -230.0 um, section = H_1
17-02-28 20:30:21.597 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:21.598 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:21.599 -08 000000037 INF: ===================MoveEmissionFilters===================
17-02-28 20:30:21.599 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:30:21.599 -08 000000052 INF: ===================Move X,Y, Parallel===================
17-02-28 20:30:21.599 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:21.600 -08 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:21.600 -08 000000074 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:21.600 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:21.600 -08 000000056 INF: ===================Move X Motor without settling===================
17-02-28 20:30:21.600 -08 000000105 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:21.600 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:21.600 -08 000000056 INF: X Motor: Xmit PR VM\n
17-02-28 20:30:21.600 -08 000000074 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:21.600 -08 000000105 INF: Y Motor: Moving to 64.5335 mm @25.000 mm/sec, started at 14.9289 mm
17-02-28 20:30:21.601 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:21.601 -08 000000105 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:21.601 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:21.601 -08 000000088 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:30:21.601 -08 000000058 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:30:21.602 -08 000000072 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:30:21.602 -08 000000064 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:30:21.602 -08 000000088 INF: ======================================
17-02-28 20:30:21.602 -08 000000064 INF: ======================================
17-02-28 20:30:21.602 -08 000000051 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:30:21.602 -08 000000091 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:30:21.602 -08 000000072 INF: ======================================
17-02-28 20:30:21.603 -08 000000091 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:30:21.603 -08 000000051 INF: ======================================
17-02-28 20:30:21.603 -08 000000091 INF: ======================================
17-02-28 20:30:21.604 -08 000000033 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:21.604 -08 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:21.604 -08 000000099 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:21.605 -08 000000058 INF: ======================================
17-02-28 20:30:21.605 -08 000000091 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:30:21.605 -08 000000071 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:30:21.605 -08 000000033 INF: ======================================
17-02-28 20:30:21.605 -08 000000091 INF: ======================================
17-02-28 20:30:21.606 -08 000000099 INF: ======================================
17-02-28 20:30:21.606 -08 000000071 INF: ======================================
17-02-28 20:30:21.606 -08 000000074 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:21.607 -08 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:21.607 -08 000000074 INF: ======================================
17-02-28 20:30:21.608 -08 000000023 INF: ======================================
17-02-28 20:30:21.609 -08 000000037 INF: ======================================
17-02-28 20:30:21.636 -08 000000056 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:30:21.636 -08 000000056 INF: X Motor: Xmit PR VI\n
17-02-28 20:30:21.650 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:30:21.698 -08 000000056 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:30:21.698 -08 000000056 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:30:21.698 -08 000000056 INF: X Motor: Moving to 88.5406 mm @15.000 mm/sec, started at 86.3047 mm
17-02-28 20:30:21.698 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:30:21.698 -08 000000105 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:21.698 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:21.698 -08 000000056 INF: X Motor: Xmit MA 12100\n
17-02-28 20:30:21.764 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:30:21.764 -08 000000056 INF: X Motor: Recv MA 12100\r\n>
17-02-28 20:30:21.764 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:21.764 -08 000000056 INF: X Motor: WaitUntilStopped 60149
17-02-28 20:30:21.823 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:30:21.823 -08 000000105 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:21.823 -08 000000105 INF: Y Motor: Set target position to 5953351 encoder counts
17-02-28 20:30:21.823 -08 000000105 INF: Y Motor: Xmit s r0xca 5953351\r
17-02-28 20:30:21.888 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:30:21.888 -08 000000105 INF: Y Motor: Start the move command
17-02-28 20:30:21.888 -08 000000105 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:21.950 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:30:21.950 -08 000000105 INF: Y Motor: WaitUntilStopped 61984
17-02-28 20:30:21.950 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:22.074 -08 000000105 INF: Y Motor: Unshifted Position: 1074394
17-02-28 20:30:22.124 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:22.248 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:22.388 -08 000000056 INF: X Motor: Xmit PR ER\n
17-02-28 20:30:22.388 -08 000000105 INF: Y Motor: Unshifted Position: 1774561
17-02-28 20:30:22.438 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:22.447 -08 000000056 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:30:22.447 -08 000000056 INF: X Motor: Moved to 88.5410 after 683 ms
17-02-28 20:30:22.447 -08 000000056 INF: ======================================
17-02-28 20:30:22.559 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:22.700 -08 000000105 INF: Y Motor: Unshifted Position: 2560413
17-02-28 20:30:22.750 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:22.871 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.009 -08 000000105 INF: Y Motor: Unshifted Position: 3337852
17-02-28 20:30:23.059 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.183 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.322 -08 000000105 INF: Y Motor: Unshifted Position: 4123754
17-02-28 20:30:23.372 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.496 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.636 -08 000000105 INF: Y Motor: Unshifted Position: 4896198
17-02-28 20:30:23.686 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.807 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:23.948 -08 000000105 INF: Y Motor: Unshifted Position: 5675812
17-02-28 20:30:23.998 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:24.119 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:24.257 -08 000000105 INF: Y Motor: Unshifted Position: 5953353
17-02-28 20:30:24.257 -08 000000105 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:24.257 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:24.319 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:30:24.319 -08 000000105 INF: Y Motor: Moved to 64.5335 after 2369 ms
17-02-28 20:30:24.319 -08 000000105 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:24.381 -08 000000105 INF: Y Motor: Recv v 4096\r
17-02-28 20:30:24.381 -08 000000105 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:24.381 -08 000000105 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:24.461 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:30:24.461 -08 000000105 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:24.461 -08 000000105 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:24.524 -08 000000105 INF: Y Motor: Recv v 402653184\r
17-02-28 20:30:24.524 -08 000000105 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:30:24.524 -08 000000105 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:24.524 -08 000000105 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:24.586 -08 000000105 INF: Y Motor: Recv v 0\r
17-02-28 20:30:24.586 -08 000000105 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:24.586 -08 000000105 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:24.586 -08 000000105 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:24.650 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:30:24.650 -08 000000105 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:24.650 -08 000000105 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:24.711 -08 000000105 INF: Y Motor: Recv ok\r
17-02-28 20:30:24.711 -08 000000105 INF: ======================================
17-02-28 20:30:24.712 -08 000000052 INF: ===================Move X,Y===================
17-02-28 20:30:24.714 -08 000000052 INF: ======================================
17-02-28 20:30:24.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:24.715 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:24.716 -08 000000042 INF: Y Motor: Set max velocity (1500000), unit is 0.1 counts/sec
17-02-28 20:30:24.716 -08 000000042 INF: Y Motor: Xmit s r0xcb 1500000\r
17-02-28 20:30:24.772 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:30:24.772 -08 000000042 INF: FPGA: Xmit ZFREQCL 9200\n
17-02-28 20:30:24.832 -08 000000028 INF: FPGA: Recv ZFREQCL
17-02-28 20:30:24.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:30:24.832 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:24.833 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:24.894 -08 000000039 INF: FPGA: Recv TDIYERD 6453352
17-02-28 20:30:24.894 -08 000000042 INF: Before scan, Y encoder from FPGA = 6453352 counts (64.534 mm)
17-02-28 20:30:24.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:24.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:24.896 -08 000000079 INF: ===================TDI Scan Setup===================
17-02-28 20:30:24.896 -08 000000086 INF: ===================Set YMotor gains for scans===================
17-02-28 20:30:24.896 -08 000000086 INF: ======================================
17-02-28 20:30:24.897 -08 000000079 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:30:24.897 -08 000000079 INF: ===================TDI Scan Setup===================
17-02-28 20:30:24.898 -08 000000079 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:30:24.899 -08 000000079 INF: ===================TDI Scan Setup, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:30:24.899 -08 000000079 INF: FPGA: Xmit TDIYPOS 6433351\n
17-02-28 20:30:24.960 -08 000000052 INF: FPGA: Recv TDIYPOS
17-02-28 20:30:24.960 -08 000000079 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:30:24.962 -08 000000079 INF: ===================TDI Scan Setup, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:30:24.962 -08 000000079 INF: FPGA: Xmit TDIYARM2 3072 1 1\n
17-02-28 20:30:25.019 -08 000000083 INF: FPGA: Recv TDIYARM2
17-02-28 20:30:25.020 -08 000000079 INF: ===================TDI Scan Setup, Arm FPGA===================
17-02-28 20:30:25.021 -08 000000079 INF: ===================TDI Scan Setup===================
17-02-28 20:30:25.022 -08 000000079 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:30:25.023 -08 000000079 INF: ===================TDI Scan Setup===================
17-02-28 20:30:25.024 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:30:25.025 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:30:25.026 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:25.401 -08 000000079 INF: Camera #0 AttachBuffer (imageDataPtr = 74572887352 imgPtr = 74572887352 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:30:25.401 -08 000000079 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:30:25.401 -08 000000079 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:25.417 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:30:25.419 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:25.811 -08 000000079 INF: Camera #2 AttachBuffer (imageDataPtr = 53754235928 imgPtr = 53895782648 , attachBufferNumFrames = 12 , frameSize = 1638400,
17-02-28 20:30:25.811 -08 000000079 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 3072
17-02-28 20:30:25.811 -08 000000079 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:25.826 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI, Serial===================
17-02-28 20:30:25.828 -08 000000079 INF: ===================TDI Scan Setup, Camera Arm TDI===================
17-02-28 20:30:25.829 -08 000000079 INF: ===================TDI Scan Setup===================
17-02-28 20:30:25.830 -08 000000079 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:25.831 -08 000000079 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:30:25.831 -08 000000079 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:25.833 -08 000000079 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:30:25.833 -08 000000079 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:30:25.833 -08 000000079 INF: Z Motor: Arming to move to -0.0100 mm
17-02-28 20:30:25.833 -08 000000079 INF: FPGA: Xmit ZYT 0 2\n
17-02-28 20:30:25.894 -08 000000033 INF: FPGA: Recv ZYT 
17-02-28 20:30:25.894 -08 000000079 INF: Z Motor: ZARM will arm Z motor and start the ramp when first camera image trigger pulse is sent (past camera clearing lines)
17-02-28 20:30:25.894 -08 000000079 INF: FPGA: Xmit ZARM 2621\n
17-02-28 20:30:25.956 -08 000000105 INF: FPGA: Recv ZARM
17-02-28 20:30:25.956 -08 000000079 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8827 ms
17-02-28 20:30:25.956 -08 000000079 INF: Z Motor: ArmAbsStepped took 122.9218 ms
17-02-28 20:30:25.956 -08 000000079 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:25.958 -08 000000079 INF: ===================TDI Scan Setup===================
17-02-28 20:30:25.959 -08 000000079 INF: ======================================
17-02-28 20:30:25.960 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:25.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:25.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:25.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:25.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:25.963 -08 000000083 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:30:25.963 -08 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:30:25.963 -08 000000083 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:30:25.963 -08 000000083 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:30:25.963 -08 000000083 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:30:25.963 -08 000000058 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:30:25.963 -08 000000083 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:30:25.963 -08 000000058 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:30:25.963 -08 000000058 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:30:25.964 -08 000000058 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:30:26.332 -08 000000104 INF: FPGA: Recv EX2MV
17-02-28 20:30:26.332 -08 000000104 INF: FPGA: Recv EX1MV
17-02-28 20:30:26.332 -08 000000058 INF: Excitation Filter 1: Moved -107 steps in 367.7541 ms
17-02-28 20:30:26.332 -08 000000083 INF: Excitation Filter 2: Moved -107 steps in 367.9411 ms
17-02-28 20:30:26.332 -08 000000058 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 367.9384 ms
17-02-28 20:30:26.332 -08 000000058 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.0514 ms
17-02-28 20:30:26.332 -08 000000083 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 368.0807 ms
17-02-28 20:30:26.332 -08 000000083 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 368.2532 ms
17-02-28 20:30:26.333 -08 000000083 INF: ======================================
17-02-28 20:30:26.333 -08 000000058 INF: ======================================
17-02-28 20:30:26.334 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:26.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:26.337 -08 000000047 INF: ===================Serial===================
17-02-28 20:30:26.337 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:30:26.337 -08 000000039 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:26.337 -08 000000039 INF: Y Motor: Moving to 62.9704 mm @1.500 mm/sec, started at 64.5335 mm
17-02-28 20:30:26.337 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:26.338 -08 000000047 INF: ===================Serial, FPGA Z Wait===================
17-02-28 20:30:26.338 -08 000000039 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:26.338 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:26.338 -08 000000047 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:30:26.338 -08 000000030 INF: ===================Camera TDI, Parallel===================
17-02-28 20:30:26.339 -08 000000100 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:30:26.339 -08 000000100 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:30:26.339 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:30:26.339 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:30:26.340 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.340 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.341 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.341 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.396 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:30:26.396 -08 000000039 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:26.396 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:26.458 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:30:26.458 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:26.490 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.490 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.491 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.491 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.520 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:30:26.520 -08 000000039 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:26.520 -08 000000039 INF: Y Motor: Set target position to 5797042 encoder counts
17-02-28 20:30:26.520 -08 000000039 INF: Y Motor: Xmit s r0xca 5797042\r
17-02-28 20:30:26.582 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:30:26.582 -08 000000039 INF: Y Motor: Start the move command
17-02-28 20:30:26.582 -08 000000039 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:26.640 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.640 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.641 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.641 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.644 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:30:26.644 -08 000000039 INF: Y Motor: WaitUntilStopped 61042
17-02-28 20:30:26.644 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:26.771 -08 000000039 INF: Y Motor: Unshifted Position: 5934883
17-02-28 20:30:26.790 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.790 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.791 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:26.791 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:26.821 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:26.940 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:30:26.940 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:30:26.940 -08 000000091 INF: ===================Camera #0 Frame #1===================
17-02-28 20:30:26.941 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 0, frameCount = 1.
17-02-28 20:30:26.941 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 1
17-02-28 20:30:26.941 -08 000000034 INF: ===================Camera #2 Frame #1===================
17-02-28 20:30:26.942 -08 000000064 INF: RunCopyService queue size at 2/28/2017 8:30:26 PM is 2
17-02-28 20:30:26.945 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:27.083 -08 000000039 INF: Y Motor: Unshifted Position: 5888080
17-02-28 20:30:27.093 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:30:27.093 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:30:27.093 -08 000000091 INF: ===================Camera #0 Frame #3===================
17-02-28 20:30:27.095 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 2, frameCount = 3.
17-02-28 20:30:27.095 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 3
17-02-28 20:30:27.095 -08 000000034 INF: ===================Camera #2 Frame #3===================
17-02-28 20:30:27.133 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:27.249 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:30:27.249 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:30:27.249 -08 000000091 INF: ===================Camera #0 Frame #4===================
17-02-28 20:30:27.252 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 3, frameCount = 4.
17-02-28 20:30:27.252 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 4
17-02-28 20:30:27.252 -08 000000034 INF: ===================Camera #2 Frame #4===================
17-02-28 20:30:27.257 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:27.393 -08 000000039 INF: Y Motor: Unshifted Position: 5841571
17-02-28 20:30:27.402 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:30:27.402 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:30:27.402 -08 000000091 INF: ===================Camera #0 Frame #5===================
17-02-28 20:30:27.405 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:30:27.405 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:30:27.405 -08 000000034 INF: ===================Camera #2 Frame #5===================
17-02-28 20:30:27.443 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:27.453 -08 000000108 INF: FPGA: Recv ZWAIT 
17-02-28 20:30:27.453 -08 000000108 INF: FPGA: Recv TDIYWAIT
17-02-28 20:30:27.453 -08 000000047 INF: ===================Serial===================
17-02-28 20:30:27.453 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:27.455 -08 000000047 INF: ===================Serial, Confirm position Z Motor===================
17-02-28 20:30:27.455 -08 000000100 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:30:27.455 -08 000000047 INF: ===================Serial===================
17-02-28 20:30:27.456 -08 000000102 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:30:27.456 -08 000000102 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:30:27.456 -08 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:30:27.456 -08 000000102 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:30:27.456 -08 000000102 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:30:27.456 -08 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:30:27.456 -08 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:30:27.456 -08 000000078 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:30:27.456 -08 000000102 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:30:27.457 -08 000000047 INF: ======================================
17-02-28 20:30:27.459 -08 000000078 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:30:27.555 -08 000000091 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:30:27.555 -08 000000091 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:30:27.555 -08 000000091 INF: ===================Camera #0 Frame #6===================
17-02-28 20:30:27.558 -08 000000034 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 5, frameCount = 6.
17-02-28 20:30:27.558 -08 000000034 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 6
17-02-28 20:30:27.558 -08 000000034 INF: ===================Camera #2 Frame #6===================
17-02-28 20:30:27.558 -08 000000091 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:30:27.559 -08 000000091 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:27.561 -08 000000034 INF: Camera complete - got 6 frames, processed 6 frames, expected 6 frames.
17-02-28 20:30:27.562 -08 000000034 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:27.570 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:27.583 -08 000000091 INF: Camera #0 ReleaseBuffer
17-02-28 20:30:27.583 -08 000000091 INF: ===================Camera TDI===================
17-02-28 20:30:27.584 -08 000000091 INF: ======================================
17-02-28 20:30:27.608 -08 000000034 INF: Camera #2 ReleaseBuffer
17-02-28 20:30:27.608 -08 000000034 INF: ===================Camera TDI===================
17-02-28 20:30:27.609 -08 000000034 INF: ======================================
17-02-28 20:30:27.611 -08 000000030 INF: ===================Camera TDI===================
17-02-28 20:30:27.612 -08 000000030 INF: ======================================
17-02-28 20:30:27.706 -08 000000039 INF: Y Motor: Unshifted Position: 5797055
17-02-28 20:30:27.756 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:27.828 -08 000000035 INF: FPGA: Recv EX1MV
17-02-28 20:30:27.828 -08 000000035 INF: FPGA: Recv EX2MV
17-02-28 20:30:27.828 -08 000000102 INF: Excitation Filter 1: Moved 107 steps in 371.6763 ms
17-02-28 20:30:27.828 -08 000000102 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 371.8926 ms
17-02-28 20:30:27.828 -08 000000102 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 371.9651 ms
17-02-28 20:30:27.828 -08 000000078 INF: Excitation Filter 2: Moved 107 steps in 371.5813 ms
17-02-28 20:30:27.828 -08 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 371.9899 ms
17-02-28 20:30:27.828 -08 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 372.0633 ms
17-02-28 20:30:27.828 -08 000000102 INF: ======================================
17-02-28 20:30:27.829 -08 000000078 INF: ======================================
17-02-28 20:30:27.830 -08 000000100 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:27.831 -08 000000100 INF: ======================================
17-02-28 20:30:27.892 -08 000000039 INF: Y Motor: Unshifted Position: 5797043
17-02-28 20:30:27.892 -08 000000039 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:27.892 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:27.959 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:30:27.959 -08 000000039 INF: Y Motor: Moved to 62.9704 after 1315 ms
17-02-28 20:30:27.959 -08 000000039 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:28.019 -08 000000039 INF: Y Motor: Recv v 4097\r
17-02-28 20:30:28.019 -08 000000039 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:28.019 -08 000000039 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:28.081 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:30:28.081 -08 000000039 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:28.081 -08 000000039 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:28.143 -08 000000039 INF: Y Motor: Recv v 134217728\r
17-02-28 20:30:28.143 -08 000000039 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:30:28.143 -08 000000039 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:28.143 -08 000000039 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:28.206 -08 000000039 INF: Y Motor: Recv v 0\r
17-02-28 20:30:28.206 -08 000000039 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:28.206 -08 000000039 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:28.206 -08 000000039 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:28.269 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:30:28.269 -08 000000039 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:28.269 -08 000000039 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:28.329 -08 000000039 INF: Y Motor: Recv ok\r
17-02-28 20:30:28.329 -08 000000039 INF: ======================================
17-02-28 20:30:28.330 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:28.331 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, Scanning===================
17-02-28 20:30:28.332 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.332 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:30:28.389 -08 000000099 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:30:28.389 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:28.455 -08 000000038 INF: FPGA: Recv TDIYERD 6297043
17-02-28 20:30:28.455 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:30:28.516 -08 000000034 INF: FPGA: Recv ZADCR 2426
17-02-28 20:30:28.516 -08 000000042 INF: At scan end Y pos = 62.970 and Z pos = -0.010. Y moved -1.363 mm
17-02-28 20:30:28.516 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:30:28.578 -08 000000039 INF: FPGA: Recv TDIPULSES 3073
17-02-28 20:30:28.578 -08 000000042 INF: The FPGA sent 3072 triggers to the camera ; expected 3072
17-02-28 20:30:28.578 -08 000000042 INF: TDIScan finished after 6991.9956 ms
17-02-28 20:30:28.578 -08 000000042 INF: Image[0]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:30:28.578 -08 000000042 INF: Image[2]: Y should trigger at 64.334 mm, 2nd row was at 64.321 mm (error = -0.013 mm)
17-02-28 20:30:28.578 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:30:28.641 -08 000000105 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:30:28.642 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.642 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.643 -08 000000098 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:30:28.643 -08 000000035 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:30:28.643 -08 000000082 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:30:28.643 -08 000000098 INF: ======================================
17-02-28 20:30:28.643 -08 000000035 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:30:28.643 -08 000000035 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:30:28.644 -08 000000082 INF: ======================================
17-02-28 20:30:28.704 -08 000000035 INF: Y Motor: Recv ok\r
17-02-28 20:30:28.704 -08 000000035 INF: ======================================
17-02-28 20:30:28.705 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.706 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.707 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:30:28.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.748 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:30:28.806 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.806 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:30:28.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.840 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:30:28.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Channels A, G, T, C===================
17-02-28 20:30:28.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:28.863 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:28.864 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, ETF: Extracting coords===================
17-02-28 20:30:28.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:28.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:30:28.872 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point, Extracting metrics===================
17-02-28 20:30:29.555 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1, Selecting focus point===================
17-02-28 20:30:29.578 -08 000000042 INF: ETF for image Index#0: Best Z position at bottom surface = -0.0812568125934751Best Z position at top surface = -0.154142056832873Best Z position at top surface + compensator offset = -0.131442056832873 C:3,L:8,B
17-02-28 20:30:29.580 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 0 is -0.154142056832873
17-02-28 20:30:29.580 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 0 is 63.94865
17-02-28 20:30:29.580 -08 000000042 INF: ETF Weighted Average for Z at Peaks index 1 is -0.0812568125934751
17-02-28 20:30:29.580 -08 000000042 INF: ETF Weighted Average for Y at Peaks index 1 is 63.59777
17-02-28 20:30:29.580 -08 000000042 INF: Z-height at LaneBottomSurface is -0.0812568125934751.
17-02-28 20:30:29.580 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:29.712 -08 000000042 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:30:29.712 -08 000000042 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:30:29.763 -08 000000071 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:29.763 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Focus Point 1===================
17-02-28 20:30:29.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:29.765 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:29.766 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:29.766 -08 000000108 INF: ===================Move Tilt Motor 2===================
17-02-28 20:30:29.767 -08 000000087 INF: ===================Move Tilt Motor 3===================
17-02-28 20:30:29.767 -08 000000108 INF: Tilt Motor 2: Moving to 5.4532 mm, started at 5.4519 mm, delta = 0.0013 mm
17-02-28 20:30:29.767 -08 000000108 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:29.767 -08 000000087 INF: Tilt Motor 3: Moving to 5.3996 mm, started at 5.3988 mm, delta = 0.0008 mm
17-02-28 20:30:29.767 -08 000000032 INF: ===================Move Tilt Motor 1===================
17-02-28 20:30:29.768 -08 000000032 INF: ======================================
17-02-28 20:30:29.768 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:29.825 -08 000000030 INF: FPGA: Recv T2RD 21464
17-02-28 20:30:29.825 -08 000000030 INF: FPGA: Recv T3RD 21254
17-02-28 20:30:29.825 -08 000000108 INF: Tilt Motor 2: Encoder: at motor step 3577 + 2/6
17-02-28 20:30:29.825 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:30:29.825 -08 000000108 INF: Tilt Motor 2: Moving to 21469 encoder counts
17-02-28 20:30:29.825 -08 000000087 INF: Tilt Motor 3: Moving to 21258 encoder counts
17-02-28 20:30:29.825 -08 000000108 INF: FPGA: Xmit T2MOVETO 21469\n
17-02-28 20:30:29.826 -08 000000087 INF: FPGA: Xmit T3MOVETO 21258\n
17-02-28 20:30:29.949 -08 000000082 INF: FPGA: Recv T3MOVETO 0
17-02-28 20:30:29.949 -08 000000082 INF: FPGA: Recv T2MOVETO 1
17-02-28 20:30:29.949 -08 000000108 INF: Tilt Motor 2: To move from 5.452 to 5.453 (0.001 mm) should take 1 steps, but required 1 steps (0.002 mm). Slippage = 0.000 mm (0.00%)
17-02-28 20:30:29.949 -08 000000087 INF: Tilt Motor 3: To move from 5.399 to 5.400 (0.001 mm) should take 1 steps, but required 0 steps (0.000 mm). Slippage = -0.002 mm (-1.85%)
17-02-28 20:30:29.949 -08 000000108 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:29.950 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:30.014 -08 000000068 INF: FPGA: Recv T2RD 21469
17-02-28 20:30:30.014 -08 000000068 INF: FPGA: Recv T3RD 21254
17-02-28 20:30:30.014 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:30:30.014 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:30.014 -08 000000108 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:30:30.015 -08 000000108 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:30.076 -08 000000034 INF: FPGA: Recv T3RD 21254
17-02-28 20:30:30.076 -08 000000034 INF: FPGA: Recv T2RD 21469
17-02-28 20:30:30.076 -08 000000108 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:30:30.076 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:30:30.076 -08 000000108 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:30.077 -08 000000087 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:30.138 -08 000000038 INF: FPGA: Recv T2RD 21469
17-02-28 20:30:30.138 -08 000000038 INF: FPGA: Recv T3RD 21254
17-02-28 20:30:30.138 -08 000000087 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:30:30.138 -08 000000108 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:30:30.138 -08 000000108 INF: Tilt Motor 2: After move to 5.4532, error = -0.0001, min/max error = -0.0018/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:30.138 -08 000000087 INF: Tilt Motor 3: After move to 5.3996, error = -0.0011, min/max error = -0.0017/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:30.138 -08 000000087 INF: Tilt Motor 3: Moved to 5.3985 after 371.5109 ms
17-02-28 20:30:30.138 -08 000000108 INF: Tilt Motor 2: Moved to 5.4531 after 371.6454 ms
17-02-28 20:30:30.139 -08 000000087 INF: ======================================
17-02-28 20:30:30.139 -08 000000108 INF: ======================================
17-02-28 20:30:30.140 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:30.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:30.141 -08 000000042 INF: Lane 8 was flagged for detilt operations. Moved to tilt positions: m1=4.97847296731801, m2=5.45318979375872, m3=5.39959579375872
17-02-28 20:30:30.141 -08 000000042 INF: ETF Best Z: -0.08125681 mm (21301 DAC)
17-02-28 20:30:30.141 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:30.142 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:30.142 -08 000000042 INF: Compensator: Remaining OutOfPath
17-02-28 20:30:30.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:30.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:30.562 -08 000000042 INF: Swath 1 position calculated to be: {X=87.98318, Y=39.78827} from estimated center X= 88.50199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:30:30.562 -08 000000042 INF: Swath 2 position calculated to be: {X=89.09118, Y=39.78827} from estimated center X= 88.50199, Y= 39.77999 on surface LaneBottomSurface
17-02-28 20:30:30.568 -08 000000042 INF: Swath 0: Converted transform from (-9.418686, -5.32536) pixels to (-0.003105, -0.001725) mm.
17-02-28 20:30:30.574 -08 000000042 INF: Swath 1: Converted transform from (-28.06015, 0.1369758) pixels to (-0.00966, 0) mm.
17-02-28 20:30:30.574 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:30:30.575 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:30:30.575 -08 000000042 INF: Transformed XStagePosition from 87.98318 mm to 87.9800721851643 mm.
17-02-28 20:30:30.587 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5765528015336 mm.
17-02-28 20:30:30.587 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3765528015336 mm.
17-02-28 20:30:30.587 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4673028015336 mm.
17-02-28 20:30:30.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:30.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:30:30.589 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:30.589 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -10.0 um, section = H_1
17-02-28 20:30:30.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:30.595 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:30.596 -08 000000070 INF: ===================MoveEmissionFilters===================
17-02-28 20:30:30.596 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:30:30.596 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:30.597 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:30.597 -08 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:30.597 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:30.597 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:30:30.597 -08 000000058 INF: ===================Move X,Y, Parallel===================
17-02-28 20:30:30.597 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:30.597 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:30.598 -08 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:30.598 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:30.598 -08 000000083 INF: ===================Move X Motor without settling===================
17-02-28 20:30:30.598 -08 000000033 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:30.598 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:30.598 -08 000000083 INF: X Motor: Xmit PR VM\n
17-02-28 20:30:30.598 -08 000000033 INF: Y Motor: Moving to 64.5766 mm @25.000 mm/sec, started at 62.9704 mm
17-02-28 20:30:30.598 -08 000000100 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:30:30.598 -08 000000054 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:30:30.598 -08 000000038 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:30:30.599 -08 000000052 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:30:30.599 -08 000000090 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:30:30.599 -08 000000054 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:30:30.599 -08 000000102 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:30:30.599 -08 000000108 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:30:30.599 -08 000000052 INF: ======================================
17-02-28 20:30:30.599 -08 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:30:30.599 -08 000000100 INF: ======================================
17-02-28 20:30:30.599 -08 000000102 INF: ======================================
17-02-28 20:30:30.599 -08 000000086 INF: ======================================
17-02-28 20:30:30.600 -08 000000108 INF: ======================================
17-02-28 20:30:30.600 -08 000000035 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:30:30.600 -08 000000035 INF: Z Motor: Moving to -0.1013 mm, started at -0.0100 mm
17-02-28 20:30:30.600 -08 000000090 INF: ======================================
17-02-28 20:30:30.600 -08 000000035 INF: FPGA: Xmit ZTRG 0\n
17-02-28 20:30:30.600 -08 000000036 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:30.601 -08 000000069 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:30.601 -08 000000033 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:30.601 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:30.601 -08 000000036 INF: ======================================
17-02-28 20:30:30.602 -08 000000038 INF: ======================================
17-02-28 20:30:30.602 -08 000000054 INF: ======================================
17-02-28 20:30:30.602 -08 000000069 INF: ======================================
17-02-28 20:30:30.603 -08 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:30.603 -08 000000068 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:30.604 -08 000000074 INF: ======================================
17-02-28 20:30:30.604 -08 000000068 INF: ======================================
17-02-28 20:30:30.606 -08 000000070 INF: ======================================
17-02-28 20:30:30.667 -08 000000100 INF: FPGA: Recv ZTRG 
17-02-28 20:30:30.667 -08 000000035 INF: FPGA: Xmit ZYT 0 3\n
17-02-28 20:30:30.669 -08 000000083 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:30:30.669 -08 000000083 INF: X Motor: Xmit PR VI\n
17-02-28 20:30:30.670 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:30:30.670 -08 000000033 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:30.670 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:30.729 -08 000000105 INF: FPGA: Recv ZYT 
17-02-28 20:30:30.729 -08 000000035 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled
17-02-28 20:30:30.729 -08 000000035 INF: FPGA: Xmit ZMV 26543\n
17-02-28 20:30:30.731 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:30:30.731 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:30.731 -08 000000083 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:30:30.731 -08 000000083 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:30:30.731 -08 000000083 INF: X Motor: Moving to 87.9801 mm @15.000 mm/sec, started at 88.5410 mm
17-02-28 20:30:30.731 -08 000000083 INF: X Motor: Xmit MA 11870\n
17-02-28 20:30:30.794 -08 000000071 INF: FPGA: Recv @LOG Trigger Camera
17-02-28 20:30:30.794 -08 000000006 INF: FPGA: Trigger Camera
17-02-28 20:30:30.796 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:30:30.796 -08 000000033 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:30.796 -08 000000083 INF: X Motor: Recv MA 11870\r\n>
17-02-28 20:30:30.796 -08 000000033 INF: Y Motor: Set target position to 5957655 encoder counts
17-02-28 20:30:30.796 -08 000000033 INF: Y Motor: Xmit s r0xca 5957655\r
17-02-28 20:30:30.796 -08 000000083 INF: X Motor: WaitUntilStopped 60037
17-02-28 20:30:30.857 -08 000000050 INF: FPGA: Recv ZMV 
17-02-28 20:30:30.857 -08 000000035 INF: Z Motor: MoveAndTrigger 'ZMV' command took 127.9009 ms
17-02-28 20:30:30.857 -08 000000035 INF: FPGA: Xmit ZDACR\n
17-02-28 20:30:30.858 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:30:30.858 -08 000000033 INF: Y Motor: Start the move command
17-02-28 20:30:30.858 -08 000000033 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:30.918 -08 000000082 INF: FPGA: Recv ZDACR 26543
17-02-28 20:30:30.918 -08 000000035 INF: Z Motor: MoveAndTrigger took 317.9694 ms w/comms
17-02-28 20:30:30.918 -08 000000035 INF: Z Motor: After move to -0.1013, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False
17-02-28 20:30:30.918 -08 000000035 INF: Z Motor: MoveAbsStepped took 318.1523 ms
17-02-28 20:30:30.918 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:30.920 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:30:30.920 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:30:30.920 -08 000000033 INF: Y Motor: WaitUntilStopped 60064
17-02-28 20:30:30.920 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:30.921 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:30:30.921 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:30:30.921 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:30.922 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:30.922 -08 000000039 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:30:30.922 -08 000000039 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:30.923 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:30.923 -08 000000039 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:30:30.981 -08 000000087 INF: FPGA: Recv ZSEL 
17-02-28 20:30:30.981 -08 000000039 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:30.982 -08 000000039 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:30:31.043 -08 000000106 INF: FPGA: Recv TDIBB
17-02-28 20:30:31.043 -08 000000039 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:31.045 -08 000000033 INF: Y Motor: Unshifted Position: 5879805
17-02-28 20:30:31.045 -08 000000039 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:30:31.045 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:31.047 -08 000000039 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:30:31.047 -08 000000039 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:30:31.047 -08 000000039 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:30:31.095 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:31.106 -08 000000095 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:31.106 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:31.108 -08 000000039 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:30:31.108 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:31.110 -08 000000039 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:30:31.110 -08 000000039 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:30:31.110 -08 000000039 INF: Z Motor: Arming to move to -0.0613 mm
17-02-28 20:30:31.110 -08 000000039 INF: FPGA: Xmit ZYT 6437655 4\n
17-02-28 20:30:31.167 -08 000000074 INF: FPGA: Recv ZYT 
17-02-28 20:30:31.167 -08 000000039 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 6379805 enc / 63.798 mm / ) = 6437655 enc / 64.377 mm
17-02-28 20:30:31.167 -08 000000039 INF: FPGA: Xmit ZARM 16058\n
17-02-28 20:30:31.219 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:31.230 -08 000000071 INF: FPGA: Recv ZARM
17-02-28 20:30:31.230 -08 000000039 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.9121 ms
17-02-28 20:30:31.230 -08 000000039 INF: Z Motor: ArmAbsStepped took 120.0819 ms
17-02-28 20:30:31.230 -08 000000039 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:31.231 -08 000000083 INF: X Motor: Xmit PR ER\n
17-02-28 20:30:31.231 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:30:31.233 -08 000000039 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:30:31.233 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:30:31.235 -08 000000039 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:30:31.235 -08 000000039 INF: ===================TDI Scan Setup===================
17-02-28 20:30:31.236 -08 000000039 INF: ======================================
17-02-28 20:30:31.293 -08 000000083 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:30:31.293 -08 000000083 INF: X Motor: Moved to 87.9795 after 496 ms
17-02-28 20:30:31.293 -08 000000083 INF: ======================================
17-02-28 20:30:31.356 -08 000000033 INF: Y Motor: Unshifted Position: 5957656
17-02-28 20:30:31.356 -08 000000033 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:31.356 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:31.420 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:30:31.420 -08 000000033 INF: Y Motor: Moved to 64.5766 after 500 ms
17-02-28 20:30:31.420 -08 000000033 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:31.484 -08 000000033 INF: Y Motor: Recv v 4096\r
17-02-28 20:30:31.484 -08 000000033 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:31.484 -08 000000033 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:31.544 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:30:31.544 -08 000000033 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:31.544 -08 000000033 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:31.606 -08 000000033 INF: Y Motor: Recv v 402653184\r
17-02-28 20:30:31.606 -08 000000033 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:30:31.606 -08 000000033 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:31.606 -08 000000033 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:31.668 -08 000000033 INF: Y Motor: Recv v 0\r
17-02-28 20:30:31.668 -08 000000033 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:31.668 -08 000000033 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:31.668 -08 000000033 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:31.730 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:30:31.730 -08 000000033 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:31.730 -08 000000033 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:31.792 -08 000000033 INF: Y Motor: Recv ok\r
17-02-28 20:30:31.792 -08 000000033 INF: ======================================
17-02-28 20:30:31.793 -08 000000058 INF: ===================Move X,Y===================
17-02-28 20:30:31.794 -08 000000058 INF: ======================================
17-02-28 20:30:31.892 -08 000000038 INF: Camera #0 AttachBuffer (imageDataPtr = 56923197488 imgPtr = 56923197488 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:30:31.892 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:30:31.892 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:31.907 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:31.909 -08 000000038 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:32.940 -08 000000038 INF: Camera #2 AttachBuffer (imageDataPtr = 58735136816 imgPtr = 64223121456 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:30:32.940 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:30:32.940 -08 000000038 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:32.955 -08 000000038 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:32.957 -08 000000038 INF: ===================Camera Arm TDI===================
17-02-28 20:30:32.958 -08 000000038 INF: ======================================
17-02-28 20:30:32.959 -08 000000035 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:32.960 -08 000000035 INF: ======================================
17-02-28 20:30:32.961 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:32.962 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:32.962 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:30:32.962 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:30:33.040 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:30:33.040 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:30:33.101 -08 000000095 INF: FPGA: Recv ZFREQCL
17-02-28 20:30:33.101 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:30:33.101 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:33.101 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:33.165 -08 000000064 INF: FPGA: Recv TDIYERD 6457656
17-02-28 20:30:33.165 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457656 counts (64.577 mm)
17-02-28 20:30:33.165 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:33.166 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:33.166 -08 000000078 INF: ===================TDI FPGA Arm===================
17-02-28 20:30:33.167 -08 000000058 INF: ===================Set YMotor gains for scans===================
17-02-28 20:30:33.167 -08 000000058 INF: ======================================
17-02-28 20:30:33.167 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:33.168 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:30:33.168 -08 000000078 INF: FPGA: Xmit TDIYPOS 6346730\n
17-02-28 20:30:33.227 -08 000000083 INF: FPGA: Recv TDIYPOS
17-02-28 20:30:33.227 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:33.229 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:30:33.229 -08 000000078 INF: FPGA: Xmit TDIYARM3 139264 6437655 1 1\n
17-02-28 20:30:33.289 -08 000000074 INF: FPGA: Recv TDIYARM3
17-02-28 20:30:33.289 -08 000000078 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:33.290 -08 000000078 INF: ===================TDI FPGA Arm===================
17-02-28 20:30:33.291 -08 000000078 INF: ======================================
17-02-28 20:30:33.292 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:33.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:33.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:33.293 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:33.294 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:33.295 -08 000000079 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:30:33.295 -08 000000069 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:30:33.295 -08 000000079 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:30:33.295 -08 000000079 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:30:33.295 -08 000000079 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:30:33.295 -08 000000069 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:30:33.295 -08 000000069 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:30:33.295 -08 000000069 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:30:33.295 -08 000000079 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:30:33.298 -08 000000069 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:30:33.664 -08 000000078 INF: FPGA: Recv EX2MV
17-02-28 20:30:33.664 -08 000000078 INF: FPGA: Recv EX1MV
17-02-28 20:30:33.664 -08 000000069 INF: Excitation Filter 1: Moved -107 steps in 368.6311 ms
17-02-28 20:30:33.664 -08 000000069 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 368.7452 ms
17-02-28 20:30:33.664 -08 000000069 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 368.8288 ms
17-02-28 20:30:33.664 -08 000000079 INF: Excitation Filter 2: Moved -107 steps in 368.8227 ms
17-02-28 20:30:33.664 -08 000000079 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 369.0261 ms
17-02-28 20:30:33.664 -08 000000079 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 369.1341 ms
17-02-28 20:30:33.664 -08 000000069 INF: ======================================
17-02-28 20:30:33.664 -08 000000079 INF: ======================================
17-02-28 20:30:33.665 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:33.666 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:33.667 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:30:33.667 -08 000000051 INF: ===================FPGA Z Wait===================
17-02-28 20:30:33.667 -08 000000068 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:33.668 -08 000000051 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:30:33.668 -08 000000068 INF: Y Motor: Moving to 14.9282 mm @6.500 mm/sec, started at 64.5766 mm
17-02-28 20:30:33.668 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:33.668 -08 000000068 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:33.668 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:33.668 -08 000000074 INF: ===================Camera TDI, Parallel===================
17-02-28 20:30:33.669 -08 000000036 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:30:33.669 -08 000000036 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:30:33.669 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:30:33.669 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:30:33.671 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:33.671 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:33.671 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:33.671 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:33.728 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:30:33.728 -08 000000068 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:33.728 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:33.790 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:30:33.790 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:33.821 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:33.821 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:33.821 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:33.821 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:33.852 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:30:33.852 -08 000000068 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:33.852 -08 000000068 INF: Y Motor: Set target position to 992822 encoder counts
17-02-28 20:30:33.852 -08 000000068 INF: Y Motor: Xmit s r0xca 992822\r
17-02-28 20:30:33.914 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:30:33.914 -08 000000068 INF: Y Motor: Start the move command
17-02-28 20:30:33.914 -08 000000068 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:33.971 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:33.971 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:33.971 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:33.971 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:33.976 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:30:33.976 -08 000000068 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:30:33.976 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.036 -08 000000083 INF: FPGA: Recv ZWAIT 
17-02-28 20:30:34.036 -08 000000051 INF: ======================================
17-02-28 20:30:34.105 -08 000000068 INF: Y Motor: Unshifted Position: 5895585
17-02-28 20:30:34.121 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:30:34.121 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:30:34.121 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:30:34.121 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:30:34.121 -08 000000106 INF: ===================Camera #2 Frame #5===================
17-02-28 20:30:34.121 -08 000000102 INF: ===================Camera #0 Frame #5===================
17-02-28 20:30:34.155 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.279 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.288 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:30:34.288 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:30:34.288 -08 000000102 INF: ===================Camera #0 Frame #11===================
17-02-28 20:30:34.289 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:30:34.289 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:30:34.289 -08 000000106 INF: ===================Camera #2 Frame #11===================
17-02-28 20:30:34.413 -08 000000068 INF: Y Motor: Unshifted Position: 5691482
17-02-28 20:30:34.458 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:30:34.458 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:30:34.458 -08 000000102 INF: ===================Camera #0 Frame #17===================
17-02-28 20:30:34.460 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:30:34.460 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:30:34.460 -08 000000106 INF: ===================Camera #2 Frame #17===================
17-02-28 20:30:34.463 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.587 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.628 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:30:34.628 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:30:34.628 -08 000000102 INF: ===================Camera #0 Frame #23===================
17-02-28 20:30:34.631 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 22, frameCount = 23.
17-02-28 20:30:34.631 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 23
17-02-28 20:30:34.631 -08 000000106 INF: ===================Camera #2 Frame #23===================
17-02-28 20:30:34.728 -08 000000068 INF: Y Motor: Unshifted Position: 5488478
17-02-28 20:30:34.778 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.798 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:30:34.798 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:30:34.798 -08 000000102 INF: ===================Camera #0 Frame #30===================
17-02-28 20:30:34.802 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:30:34.802 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:30:34.802 -08 000000106 INF: ===================Camera #2 Frame #30===================
17-02-28 20:30:34.900 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:34.969 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:30:34.969 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:30:34.969 -08 000000102 INF: ===================Camera #0 Frame #36===================
17-02-28 20:30:34.974 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 35, frameCount = 36.
17-02-28 20:30:34.974 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 36
17-02-28 20:30:34.974 -08 000000106 INF: ===================Camera #2 Frame #36===================
17-02-28 20:30:35.039 -08 000000068 INF: Y Motor: Unshifted Position: 5286972
17-02-28 20:30:35.089 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:35.137 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:30:35.137 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:30:35.137 -08 000000102 INF: ===================Camera #0 Frame #42===================
17-02-28 20:30:35.143 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 41, frameCount = 42.
17-02-28 20:30:35.143 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 42
17-02-28 20:30:35.143 -08 000000106 INF: ===================Camera #2 Frame #42===================
17-02-28 20:30:35.213 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:35.306 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:30:35.306 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:30:35.306 -08 000000102 INF: ===================Camera #0 Frame #48===================
17-02-28 20:30:35.312 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 47, frameCount = 48.
17-02-28 20:30:35.312 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 48
17-02-28 20:30:35.312 -08 000000106 INF: ===================Camera #2 Frame #48===================
17-02-28 20:30:35.349 -08 000000068 INF: Y Motor: Unshifted Position: 5083302
17-02-28 20:30:35.399 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:35.475 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 53, frameCount = 54.
17-02-28 20:30:35.475 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 54
17-02-28 20:30:35.475 -08 000000102 INF: ===================Camera #0 Frame #54===================
17-02-28 20:30:35.481 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 54, frameCount = 55.
17-02-28 20:30:35.481 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 55
17-02-28 20:30:35.481 -08 000000106 INF: ===================Camera #2 Frame #55===================
17-02-28 20:30:35.524 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:35.644 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:30:35.644 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:30:35.644 -08 000000102 INF: ===================Camera #0 Frame #61===================
17-02-28 20:30:35.653 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 60, frameCount = 61.
17-02-28 20:30:35.653 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 61
17-02-28 20:30:35.653 -08 000000106 INF: ===================Camera #2 Frame #61===================
17-02-28 20:30:35.662 -08 000000068 INF: Y Motor: Unshifted Position: 4879850
17-02-28 20:30:35.712 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:35.816 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:30:35.816 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:30:35.816 -08 000000102 INF: ===================Camera #0 Frame #67===================
17-02-28 20:30:35.822 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 66, frameCount = 67.
17-02-28 20:30:35.822 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 67
17-02-28 20:30:35.822 -08 000000106 INF: ===================Camera #2 Frame #67===================
17-02-28 20:30:35.836 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:35.975 -08 000000068 INF: Y Motor: Unshifted Position: 4678137
17-02-28 20:30:35.985 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:30:35.985 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:30:35.985 -08 000000102 INF: ===================Camera #0 Frame #73===================
17-02-28 20:30:35.991 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 72, frameCount = 73.
17-02-28 20:30:35.991 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 73
17-02-28 20:30:35.991 -08 000000106 INF: ===================Camera #2 Frame #73===================
17-02-28 20:30:36.025 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:36.150 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:36.154 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 78, frameCount = 79.
17-02-28 20:30:36.154 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 79
17-02-28 20:30:36.154 -08 000000102 INF: ===================Camera #0 Frame #79===================
17-02-28 20:30:36.160 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 79, frameCount = 80.
17-02-28 20:30:36.160 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 80
17-02-28 20:30:36.160 -08 000000106 INF: ===================Camera #2 Frame #80===================
17-02-28 20:30:36.286 -08 000000068 INF: Y Motor: Unshifted Position: 4473808
17-02-28 20:30:36.324 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:30:36.324 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:30:36.324 -08 000000102 INF: ===================Camera #0 Frame #86===================
17-02-28 20:30:36.334 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 85, frameCount = 86.
17-02-28 20:30:36.334 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 86
17-02-28 20:30:36.334 -08 000000106 INF: ===================Camera #2 Frame #86===================
17-02-28 20:30:36.337 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:36.462 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:36.496 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:30:36.496 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:30:36.496 -08 000000102 INF: ===================Camera #0 Frame #92===================
17-02-28 20:30:36.503 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 91, frameCount = 92.
17-02-28 20:30:36.503 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 92
17-02-28 20:30:36.503 -08 000000106 INF: ===================Camera #2 Frame #92===================
17-02-28 20:30:36.600 -08 000000068 INF: Y Motor: Unshifted Position: 4272526
17-02-28 20:30:36.650 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:36.665 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:30:36.665 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:30:36.665 -08 000000102 INF: ===================Camera #0 Frame #98===================
17-02-28 20:30:36.672 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 97, frameCount = 98.
17-02-28 20:30:36.672 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 98
17-02-28 20:30:36.672 -08 000000106 INF: ===================Camera #2 Frame #98===================
17-02-28 20:30:36.774 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:36.834 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 103, frameCount = 104.
17-02-28 20:30:36.834 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 104
17-02-28 20:30:36.834 -08 000000102 INF: ===================Camera #0 Frame #104===================
17-02-28 20:30:36.841 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 104, frameCount = 105.
17-02-28 20:30:36.841 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 105
17-02-28 20:30:36.841 -08 000000106 INF: ===================Camera #2 Frame #105===================
17-02-28 20:30:36.910 -08 000000068 INF: Y Motor: Unshifted Position: 4067553
17-02-28 20:30:36.960 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:37.003 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:30:37.003 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:30:37.003 -08 000000102 INF: ===================Camera #0 Frame #111===================
17-02-28 20:30:37.014 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 110, frameCount = 111.
17-02-28 20:30:37.014 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 111
17-02-28 20:30:37.014 -08 000000106 INF: ===================Camera #2 Frame #111===================
17-02-28 20:30:37.084 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:37.175 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:30:37.175 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:30:37.175 -08 000000102 INF: ===================Camera #0 Frame #117===================
17-02-28 20:30:37.183 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 116, frameCount = 117.
17-02-28 20:30:37.183 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 117
17-02-28 20:30:37.183 -08 000000106 INF: ===================Camera #2 Frame #117===================
17-02-28 20:30:37.223 -08 000000068 INF: Y Motor: Unshifted Position: 3865190
17-02-28 20:30:37.273 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:37.344 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 122, frameCount = 123.
17-02-28 20:30:37.344 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 123
17-02-28 20:30:37.344 -08 000000102 INF: ===================Camera #0 Frame #123===================
17-02-28 20:30:37.352 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 123, frameCount = 124.
17-02-28 20:30:37.352 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 124
17-02-28 20:30:37.352 -08 000000106 INF: ===================Camera #2 Frame #124===================
17-02-28 20:30:37.397 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:37.513 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 128, frameCount = 129.
17-02-28 20:30:37.513 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 129
17-02-28 20:30:37.513 -08 000000102 INF: ===================Camera #0 Frame #129===================
17-02-28 20:30:37.525 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 129, frameCount = 130.
17-02-28 20:30:37.525 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 130
17-02-28 20:30:37.525 -08 000000106 INF: ===================Camera #2 Frame #130===================
17-02-28 20:30:37.536 -08 000000068 INF: Y Motor: Unshifted Position: 3662386
17-02-28 20:30:37.586 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:37.682 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:30:37.682 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:30:37.682 -08 000000102 INF: ===================Camera #0 Frame #136===================
17-02-28 20:30:37.694 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 135, frameCount = 136.
17-02-28 20:30:37.694 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 136
17-02-28 20:30:37.694 -08 000000106 INF: ===================Camera #2 Frame #136===================
17-02-28 20:30:37.710 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:37.848 -08 000000068 INF: Y Motor: Unshifted Position: 3460028
17-02-28 20:30:37.854 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:30:37.854 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:30:37.854 -08 000000102 INF: ===================Camera #0 Frame #142===================
17-02-28 20:30:37.864 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 141, frameCount = 142.
17-02-28 20:30:37.864 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 142
17-02-28 20:30:37.864 -08 000000106 INF: ===================Camera #2 Frame #142===================
17-02-28 20:30:37.898 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.022 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.023 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 147, frameCount = 148.
17-02-28 20:30:38.023 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 148
17-02-28 20:30:38.023 -08 000000102 INF: ===================Camera #0 Frame #148===================
17-02-28 20:30:38.033 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 148, frameCount = 149.
17-02-28 20:30:38.033 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 149
17-02-28 20:30:38.033 -08 000000106 INF: ===================Camera #2 Frame #149===================
17-02-28 20:30:38.157 -08 000000068 INF: Y Motor: Unshifted Position: 3256577
17-02-28 20:30:38.192 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 153, frameCount = 154.
17-02-28 20:30:38.192 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 154
17-02-28 20:30:38.192 -08 000000102 INF: ===================Camera #0 Frame #154===================
17-02-28 20:30:38.206 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 154, frameCount = 155.
17-02-28 20:30:38.206 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 155
17-02-28 20:30:38.206 -08 000000106 INF: ===================Camera #2 Frame #155===================
17-02-28 20:30:38.207 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.332 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.361 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:30:38.361 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:30:38.361 -08 000000102 INF: ===================Camera #0 Frame #161===================
17-02-28 20:30:38.376 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 160, frameCount = 161.
17-02-28 20:30:38.376 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 161
17-02-28 20:30:38.376 -08 000000106 INF: ===================Camera #2 Frame #161===================
17-02-28 20:30:38.471 -08 000000068 INF: Y Motor: Unshifted Position: 3053560
17-02-28 20:30:38.521 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.534 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:30:38.534 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:30:38.534 -08 000000102 INF: ===================Camera #0 Frame #167===================
17-02-28 20:30:38.545 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 166, frameCount = 167.
17-02-28 20:30:38.545 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 167
17-02-28 20:30:38.545 -08 000000106 INF: ===================Camera #2 Frame #167===================
17-02-28 20:30:38.645 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.703 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 172, frameCount = 173.
17-02-28 20:30:38.703 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 173
17-02-28 20:30:38.703 -08 000000102 INF: ===================Camera #0 Frame #173===================
17-02-28 20:30:38.715 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 173, frameCount = 174.
17-02-28 20:30:38.715 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 174
17-02-28 20:30:38.715 -08 000000106 INF: ===================Camera #2 Frame #174===================
17-02-28 20:30:38.781 -08 000000068 INF: Y Motor: Unshifted Position: 2852068
17-02-28 20:30:38.831 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:38.872 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 178, frameCount = 179.
17-02-28 20:30:38.872 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 179
17-02-28 20:30:38.872 -08 000000102 INF: ===================Camera #0 Frame #179===================
17-02-28 20:30:38.888 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 179, frameCount = 180.
17-02-28 20:30:38.888 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 180
17-02-28 20:30:38.888 -08 000000106 INF: ===================Camera #2 Frame #180===================
17-02-28 20:30:38.957 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.042 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:30:39.042 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:30:39.042 -08 000000102 INF: ===================Camera #0 Frame #186===================
17-02-28 20:30:39.058 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 185, frameCount = 186.
17-02-28 20:30:39.058 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 186
17-02-28 20:30:39.058 -08 000000106 INF: ===================Camera #2 Frame #186===================
17-02-28 20:30:39.093 -08 000000068 INF: Y Motor: Unshifted Position: 2647747
17-02-28 20:30:39.143 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.214 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 191, frameCount = 192.
17-02-28 20:30:39.214 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 192
17-02-28 20:30:39.214 -08 000000102 INF: ===================Camera #0 Frame #192===================
17-02-28 20:30:39.228 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 192, frameCount = 193.
17-02-28 20:30:39.228 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 193
17-02-28 20:30:39.228 -08 000000106 INF: ===================Camera #2 Frame #193===================
17-02-28 20:30:39.270 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.382 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 197, frameCount = 198.
17-02-28 20:30:39.382 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 198
17-02-28 20:30:39.382 -08 000000102 INF: ===================Camera #0 Frame #198===================
17-02-28 20:30:39.402 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 198, frameCount = 199.
17-02-28 20:30:39.402 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 199
17-02-28 20:30:39.402 -08 000000106 INF: ===================Camera #2 Frame #199===================
17-02-28 20:30:39.408 -08 000000068 INF: Y Motor: Unshifted Position: 2443436
17-02-28 20:30:39.458 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.552 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:30:39.552 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:30:39.552 -08 000000102 INF: ===================Camera #0 Frame #205===================
17-02-28 20:30:39.572 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 204, frameCount = 205.
17-02-28 20:30:39.572 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 205
17-02-28 20:30:39.572 -08 000000106 INF: ===================Camera #2 Frame #205===================
17-02-28 20:30:39.581 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.719 -08 000000068 INF: Y Motor: Unshifted Position: 2243241
17-02-28 20:30:39.725 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 210, frameCount = 211.
17-02-28 20:30:39.725 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 211
17-02-28 20:30:39.725 -08 000000102 INF: ===================Camera #0 Frame #211===================
17-02-28 20:30:39.742 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 211, frameCount = 212.
17-02-28 20:30:39.742 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 212
17-02-28 20:30:39.742 -08 000000106 INF: ===================Camera #2 Frame #212===================
17-02-28 20:30:39.769 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.892 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:39.895 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 216, frameCount = 217.
17-02-28 20:30:39.895 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 217
17-02-28 20:30:39.895 -08 000000102 INF: ===================Camera #0 Frame #217===================
17-02-28 20:30:39.916 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 217, frameCount = 218.
17-02-28 20:30:39.916 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 218
17-02-28 20:30:39.916 -08 000000106 INF: ===================Camera #2 Frame #218===================
17-02-28 20:30:40.031 -08 000000068 INF: Y Motor: Unshifted Position: 2038919
17-02-28 20:30:40.065 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 222, frameCount = 223.
17-02-28 20:30:40.065 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 223
17-02-28 20:30:40.065 -08 000000102 INF: ===================Camera #0 Frame #223===================
17-02-28 20:30:40.081 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:40.086 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 223, frameCount = 224.
17-02-28 20:30:40.086 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 224
17-02-28 20:30:40.086 -08 000000106 INF: ===================Camera #2 Frame #224===================
17-02-28 20:30:40.205 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:40.235 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:30:40.235 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:30:40.235 -08 000000102 INF: ===================Camera #0 Frame #230===================
17-02-28 20:30:40.256 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 229, frameCount = 230.
17-02-28 20:30:40.256 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 230
17-02-28 20:30:40.256 -08 000000106 INF: ===================Camera #2 Frame #230===================
17-02-28 20:30:40.341 -08 000000068 INF: Y Motor: Unshifted Position: 1837423
17-02-28 20:30:40.391 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:40.408 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 235, frameCount = 236.
17-02-28 20:30:40.408 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 236
17-02-28 20:30:40.408 -08 000000102 INF: ===================Camera #0 Frame #236===================
17-02-28 20:30:40.426 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 236, frameCount = 237.
17-02-28 20:30:40.426 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 237
17-02-28 20:30:40.426 -08 000000106 INF: ===================Camera #2 Frame #237===================
17-02-28 20:30:40.516 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:40.578 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 241, frameCount = 242.
17-02-28 20:30:40.578 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 242
17-02-28 20:30:40.578 -08 000000102 INF: ===================Camera #0 Frame #242===================
17-02-28 20:30:40.600 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 242, frameCount = 243.
17-02-28 20:30:40.600 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 243
17-02-28 20:30:40.600 -08 000000106 INF: ===================Camera #2 Frame #243===================
17-02-28 20:30:40.655 -08 000000068 INF: Y Motor: Unshifted Position: 1633317
17-02-28 20:30:40.705 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:40.748 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:30:40.748 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:30:40.748 -08 000000102 INF: ===================Camera #0 Frame #249===================
17-02-28 20:30:40.771 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 248, frameCount = 249.
17-02-28 20:30:40.771 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 249
17-02-28 20:30:40.771 -08 000000106 INF: ===================Camera #2 Frame #249===================
17-02-28 20:30:40.829 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:40.921 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 254, frameCount = 255.
17-02-28 20:30:40.921 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 255
17-02-28 20:30:40.921 -08 000000102 INF: ===================Camera #0 Frame #255===================
17-02-28 20:30:40.941 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 255, frameCount = 256.
17-02-28 20:30:40.941 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 256
17-02-28 20:30:40.941 -08 000000106 INF: ===================Camera #2 Frame #256===================
17-02-28 20:30:40.965 -08 000000068 INF: Y Motor: Unshifted Position: 1431599
17-02-28 20:30:41.015 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:41.091 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 260, frameCount = 261.
17-02-28 20:30:41.091 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 261
17-02-28 20:30:41.091 -08 000000102 INF: ===================Camera #0 Frame #261===================
17-02-28 20:30:41.115 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 261, frameCount = 262.
17-02-28 20:30:41.115 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 262
17-02-28 20:30:41.115 -08 000000106 INF: ===================Camera #2 Frame #262===================
17-02-28 20:30:41.143 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:41.259 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 266, frameCount = 267.
17-02-28 20:30:41.259 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 267
17-02-28 20:30:41.259 -08 000000102 INF: ===================Camera #0 Frame #267===================
17-02-28 20:30:41.279 -08 000000068 INF: Y Motor: Unshifted Position: 1225969
17-02-28 20:30:41.285 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 267, frameCount = 268.
17-02-28 20:30:41.285 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 268
17-02-28 20:30:41.285 -08 000000106 INF: ===================Camera #2 Frame #268===================
17-02-28 20:30:41.329 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:41.401 -08 000000071 INF: FPGA: Recv TDIYWAIT
17-02-28 20:30:41.401 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:41.403 -08 000000036 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:30:41.404 -08 000000044 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:30:41.404 -08 000000039 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:30:41.404 -08 000000044 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:30:41.404 -08 000000044 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:30:41.404 -08 000000044 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:30:41.404 -08 000000039 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:30:41.404 -08 000000039 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:30:41.404 -08 000000039 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:30:41.404 -08 000000044 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:30:41.405 -08 000000039 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:30:41.429 -08 000000102 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:41.429 -08 000000102 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:41.429 -08 000000102 INF: ===================Camera #0 Frame #272===================
17-02-28 20:30:41.446 -08 000000102 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:41.447 -08 000000102 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:41.453 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:41.589 -08 000000068 INF: Y Motor: Unshifted Position: 1025773
17-02-28 20:30:41.613 -08 000000102 INF: Camera #0 ReleaseBuffer
17-02-28 20:30:41.613 -08 000000106 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:41.613 -08 000000106 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:41.613 -08 000000106 INF: ===================Camera #2 Frame #272===================
17-02-28 20:30:41.613 -08 000000102 INF: ===================Camera TDI===================
17-02-28 20:30:41.625 -08 000000106 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:41.626 -08 000000106 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:41.639 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:41.646 -08 000000102 INF: ======================================
17-02-28 20:30:41.777 -08 000000029 INF: FPGA: Recv EX1MV
17-02-28 20:30:41.777 -08 000000029 INF: FPGA: Recv EX2MV
17-02-28 20:30:41.777 -08 000000044 INF: Excitation Filter 1: Moved 107 steps in 373.0985 ms
17-02-28 20:30:41.777 -08 000000044 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.2193 ms
17-02-28 20:30:41.777 -08 000000039 INF: Excitation Filter 2: Moved 107 steps in 373.0049 ms
17-02-28 20:30:41.777 -08 000000039 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.2015 ms
17-02-28 20:30:41.777 -08 000000044 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.2889 ms
17-02-28 20:30:41.777 -08 000000039 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.2787 ms
17-02-28 20:30:41.778 -08 000000044 INF: ======================================
17-02-28 20:30:41.778 -08 000000039 INF: ======================================
17-02-28 20:30:41.779 -08 000000068 INF: Y Motor: Unshifted Position: 992823
17-02-28 20:30:41.779 -08 000000068 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:41.779 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:41.779 -08 000000036 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:41.780 -08 000000036 INF: ======================================
17-02-28 20:30:41.823 -08 000000106 INF: Camera #2 ReleaseBuffer
17-02-28 20:30:41.823 -08 000000106 INF: ===================Camera TDI===================
17-02-28 20:30:41.841 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:30:41.841 -08 000000068 INF: Y Motor: Moved to 14.9282 after 7864 ms
17-02-28 20:30:41.841 -08 000000068 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:41.856 -08 000000106 INF: ======================================
17-02-28 20:30:41.857 -08 000000074 INF: ===================Camera TDI===================
17-02-28 20:30:41.858 -08 000000074 INF: ======================================
17-02-28 20:30:41.904 -08 000000068 INF: Y Motor: Recv v 4097\r
17-02-28 20:30:41.904 -08 000000068 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:41.904 -08 000000068 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:41.965 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:30:41.965 -08 000000068 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:41.965 -08 000000068 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:42.027 -08 000000068 INF: Y Motor: Recv v 134217728\r
17-02-28 20:30:42.027 -08 000000068 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:30:42.027 -08 000000068 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:42.027 -08 000000068 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:42.089 -08 000000068 INF: Y Motor: Recv v 0\r
17-02-28 20:30:42.089 -08 000000068 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:42.089 -08 000000068 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:42.089 -08 000000068 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:42.151 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:30:42.151 -08 000000068 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:42.151 -08 000000068 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:42.213 -08 000000068 INF: Y Motor: Recv ok\r
17-02-28 20:30:42.213 -08 000000068 INF: ======================================
17-02-28 20:30:42.214 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:42.215 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:42.216 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.216 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:30:42.276 -08 000000037 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:30:42.276 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:42.338 -08 000000091 INF: FPGA: Recv TDIYERD 1492823
17-02-28 20:30:42.338 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:30:42.400 -08 000000034 INF: FPGA: Recv ZADCR 22022
17-02-28 20:30:42.400 -08 000000042 INF: At scan end Y pos = 14.928 and Z pos = -0.085. Y moved -48.539 mm
17-02-28 20:30:42.400 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:30:42.462 -08 000000070 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:30:42.462 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:30:42.462 -08 000000042 INF: TDIScan finished after 11886.1957 ms
17-02-28 20:30:42.462 -08 000000042 INF: Image[0]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:30:42.462 -08 000000042 INF: Image[2]: Y should trigger at 63.467 mm, 2nd row was at 64.376 mm (error = 0.909 mm)
17-02-28 20:30:42.464 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.494 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.433 um
17-02-28 20:30:42.495 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.495 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:30:42.524 -08 000000038 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:30:42.524 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.525 -08 000000064 INF: ===================Dither Clean Up Command===================
17-02-28 20:30:42.525 -08 000000108 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:30:42.525 -08 000000091 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:30:42.525 -08 000000071 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:30:42.525 -08 000000071 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:30:42.526 -08 000000108 INF: ======================================
17-02-28 20:30:42.526 -08 000000071 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:30:42.526 -08 000000091 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:30:42.526 -08 000000091 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:30:42.526 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:42.526 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:42.527 -08 000000023 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:30:42.529 -08 000000029 INF: ===================LFT:Extracting coords===================
17-02-28 20:30:42.554 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:42.555 -08 000000029 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:30:42.556 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.556 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.556 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.556 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.556 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:42.556 -08 000000058 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:42.557 -08 000000033 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:42.557 -08 000000032 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:42.588 -08 000000070 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:42.588 -08 000000070 INF: FPGA: Recv ZSEL 
17-02-28 20:30:42.589 -08 000000023 INF: FPGA: Xmit ZDACW 26543\n
17-02-28 20:30:42.589 -08 000000071 INF: ======================================
17-02-28 20:30:42.591 -08 000000091 INF: Y Motor: Recv ok\r
17-02-28 20:30:42.591 -08 000000091 INF: ======================================
17-02-28 20:30:42.630 -08 000000078 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:42.631 -08 000000033 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:42.631 -08 000000032 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:42.631 -08 000000058 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:42.648 -08 000000038 INF: FPGA: Recv ZDACW 
17-02-28 20:30:42.648 -08 000000023 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:30:42.649 -08 000000023 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:30:42.710 -08 000000086 INF: FPGA: Recv TDIBB
17-02-28 20:30:42.710 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:42.711 -08 000000023 INF: ======================================
17-02-28 20:30:42.782 -08 000000078 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:30:42.782 -08 000000033 INF: LFT found best fwhm score 2.000083 in 151 ms
17-02-28 20:30:42.782 -08 000000033 INF: LFT found good score at index 7377 with fwhm value 2.000083. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:8,B
17-02-28 20:30:42.782 -08 000000032 INF: LFT found best fwhm score 2.000096 in 151 ms
17-02-28 20:30:42.782 -08 000000032 INF: LFT found good score at index 1001 with fwhm value 2.000096. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:8,B
17-02-28 20:30:42.782 -08 000000078 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0812568125934751 in the next cycle, cycle 4 FC:B, C:3,L:8,B
17-02-28 20:30:42.782 -08 000000032 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.782 -08 000000033 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.782 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.783 -08 000000032 INF: ======================================
17-02-28 20:30:42.783 -08 000000033 INF: ======================================
17-02-28 20:30:42.783 -08 000000078 INF: ======================================
17-02-28 20:30:42.785 -08 000000058 INF: LFT found best fwhm score 2.000046 in 154 ms
17-02-28 20:30:42.785 -08 000000058 INF: LFT found good score at index 2753 with fwhm value 2.000046. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:8,B
17-02-28 20:30:42.785 -08 000000058 INF: ===================LookupFocusTracking===================
17-02-28 20:30:42.785 -08 000000058 INF: ======================================
17-02-28 20:30:42.787 -08 000000029 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:42.788 -08 000000029 INF: LFT weighted average best Z for bottom surface is at -0.081mm FC:B, C:3,L:8,B
17-02-28 20:30:42.788 -08 000000029 INF: ======================================
17-02-28 20:30:42.789 -08 000000064 INF: ======================================
17-02-28 20:30:42.790 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:30:42.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:30:42.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:30:42.791 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:30:42.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:30:42.792 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:30:42.793 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:30:42.793 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module...===================
17-02-28 20:30:42.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:30:42.793 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 1 - X = 87.98318 Y = 39.78827===================
17-02-28 20:30:42.816 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:30:42.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:42.817 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:42.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:30:42.817 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:30:42.817 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:30:42.818 -08 000000042 INF: Transformed XStagePosition from 89.09118 mm to 89.0815188940614 mm.
17-02-28 20:30:42.898 -08 000000042 INF: Transformed StartingYStagePosition from 64.5782778015137 mm to 64.5782778015137 mm.
17-02-28 20:30:42.898 -08 000000042 INF: Transformed StartingYStageITFPosition from 64.3782778015137 mm to 64.3782778015137 mm.
17-02-28 20:30:42.898 -08 000000042 INF: Transformed TriggerYStagePosition from 63.4690278015137 mm to 63.4690278015137 mm.
17-02-28 20:30:42.902 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.902 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Populating image tags===================
17-02-28 20:30:42.902 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:42.902 -08 000000042 INF: TDIScan start: HighRes1x1, velocity = 6.5 mm/sec, clearing lines = 66, image lines = 139264, channels = A, G, T, C, TDI Z = -101.3 um, section = H_1
17-02-28 20:30:42.921 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2104 Request: {"Cycle":3,"Lane":8,"Tile":2104,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF251","HCSMMF201","HCSMMF176","HCSMMF238"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:42.940 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:42.942 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:42.947 -08 000000030 INF: ===================MoveEmissionFilters===================
17-02-28 20:30:42.951 -08 000000068 INF: ===================Move X,Y===================
17-02-28 20:30:42.952 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:42.953 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:42.953 -08 000000068 INF: ===================Move X,Y, Parallel===================
17-02-28 20:30:42.953 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor===================
17-02-28 20:30:42.953 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:42.954 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:42.954 -08 000000037 INF: Z Motor: Entering MoveAbsStepped
17-02-28 20:30:42.954 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:42.955 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:42.955 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:42.955 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet===================
17-02-28 20:30:42.955 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:42.956 -08 000000060 INF: ===================Move Emission Filter 41(sim) to IntoPath===================
17-02-28 20:30:43.001 -08 000000064 INF: ===================Move X Motor without settling===================
17-02-28 20:30:43.001 -08 000000077 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:43.001 -08 000000039 INF: ===================Move Emission Filter 31(sim) to OutOfPath===================
17-02-28 20:30:43.001 -08 000000064 INF: X Motor: Xmit PR VM\n
17-02-28 20:30:43.001 -08 000000077 INF: Y Motor: Moving to 64.5783 mm @25.000 mm/sec, started at 14.9282 mm
17-02-28 20:30:43.001 -08 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath===================
17-02-28 20:30:43.001 -08 000000077 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:43.001 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:43.002 -08 000000039 INF: ======================================
17-02-28 20:30:43.002 -08 000000060 INF: ======================================
17-02-28 20:30:43.003 -08 000000086 INF: ======================================
17-02-28 20:30:43.003 -08 000000102 INF: ===================Move Emission Filter 11(sim) to OutOfPath===================
17-02-28 20:30:43.003 -08 000000035 INF: ===================Move Emission Filter 32(sim) to IntoPath===================
17-02-28 20:30:43.003 -08 000000069 INF: ===================Move Emission Filter 12 to IntoPath===================
17-02-28 20:30:43.004 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm===================
17-02-28 20:30:43.004 -08 000000069 INF: Emission Filter 12: Remaining IntoPath
17-02-28 20:30:43.004 -08 000000102 INF: ======================================
17-02-28 20:30:43.005 -08 000000069 INF: ======================================
17-02-28 20:30:43.005 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet===================
17-02-28 20:30:43.005 -08 000000036 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'===================
17-02-28 20:30:43.005 -08 000000035 INF: ======================================
17-02-28 20:30:43.006 -08 000000108 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'===================
17-02-28 20:30:43.006 -08 000000036 INF: ======================================
17-02-28 20:30:43.006 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:30:43.007 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:43.007 -08 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath===================
17-02-28 20:30:43.008 -08 000000069 INF: ===================Camera Arm TDI===================
17-02-28 20:30:43.008 -08 000000036 INF: ===================Move Emission Filter 22(sim) to OutOfPath===================
17-02-28 20:30:43.008 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:30:43.008 -08 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'===================
17-02-28 20:30:43.009 -08 000000086 INF: ======================================
17-02-28 20:30:43.009 -08 000000108 INF: ======================================
17-02-28 20:30:43.009 -08 000000069 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:43.009 -08 000000036 INF: ======================================
17-02-28 20:30:43.010 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:43.010 -08 000000069 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:43.010 -08 000000102 INF: FPGA: Xmit ZSEL 3\n
17-02-28 20:30:43.012 -08 000000105 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'===================
17-02-28 20:30:43.012 -08 000000095 INF: ======================================
17-02-28 20:30:43.013 -08 000000105 INF: ======================================
17-02-28 20:30:43.015 -08 000000030 INF: ======================================
17-02-28 20:30:43.033 -08 000000106 INF: FPGA: Recv ZSEL 
17-02-28 20:30:43.035 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:43.035 -08 000000102 INF: FPGA: Xmit TDIBB 1\n
17-02-28 20:30:43.036 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:30:43.036 -08 000000077 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:43.036 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:43.037 -08 000000064 INF: X Motor: Recv PR VM\r\n6144\r\n>
17-02-28 20:30:43.037 -08 000000064 INF: X Motor: Xmit PR VI\n
17-02-28 20:30:43.040 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2109 Request: {"Cycle":3,"Lane":8,"Tile":2109,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF268","HCSMMF209","HCSMMF254","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.040 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2111 Request: {"Cycle":3,"Lane":8,"Tile":2111,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF262","HCSMMF246","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.041 -08 000000047 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2106 Request: {"Cycle":3,"Lane":8,"Tile":2106,"Channels":["T","C","A","G"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF183","HCSMMF198","HCSMMF180"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.042 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2115 Request: {"Cycle":3,"Lane":8,"Tile":2115,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF225","HCSMMF234","HCSMMF271"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.043 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2103 Request: {"Cycle":3,"Lane":8,"Tile":2103,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF203","HCSMMF266","HCSMMF223","HCSMMF261"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.044 -08 000000084 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2114 Request: {"Cycle":3,"Lane":8,"Tile":2114,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF280","HCSMMF264","HCSMMF229","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.044 -08 000000070 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2107 Request: {"Cycle":3,"Lane":8,"Tile":2107,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF236","HCSMMF181","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.045 -08 000000083 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2108 Request: {"Cycle":3,"Lane":8,"Tile":2108,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF256","HCSMMF213","HCSMMF210","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.046 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2110 Request: {"Cycle":3,"Lane":8,"Tile":2110,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF221","HCSMMF192","HCSMMF279"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.047 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2118 Request: {"Cycle":3,"Lane":8,"Tile":2118,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF255","HCSMMF284","HCSMMF287","HCSMMF206"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.048 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2101 Request: {"Cycle":3,"Lane":8,"Tile":2101,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF235","HCSMMF241","HCSMMF182","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.048 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2113 Request: {"Cycle":3,"Lane":8,"Tile":2113,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF272","HCSMMF281","HCSMMF245","HCSMMF249"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.049 -08 000000074 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2116 Request: {"Cycle":3,"Lane":8,"Tile":2116,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF227","HCSMMF188","HCSMMF220","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.050 -08 000000067 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2117 Request: {"Cycle":3,"Lane":8,"Tile":2117,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF233","HCSMMF239","HCSMMF237","HCSMMF258"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.051 -08 000000087 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2112 Request: {"Cycle":3,"Lane":8,"Tile":2112,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF244","HCSMMF191","HCSMMF260","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.052 -08 000000050 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2105 Request: {"Cycle":3,"Lane":8,"Tile":2105,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF217","HCSMMF286","HCSMMF202"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.053 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2102 Request: {"Cycle":3,"Lane":8,"Tile":2102,"Channels":["G","A","C","T"],"MemoryMappedFileNames":["HCSMMF275","HCSMMF278","HCSMMF276","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.054 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2119 Request: {"Cycle":3,"Lane":8,"Tile":2119,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF232","HCSMMF212","HCSMMF265","HCSMMF186"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.054 -08 000000062 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2120 Request: {"Cycle":3,"Lane":8,"Tile":2120,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF257","HCSMMF282","HCSMMF269","HCSMMF179"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.055 -08 000000032 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2121 Request: {"Cycle":3,"Lane":8,"Tile":2121,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF263","HCSMMF193","HCSMMF283","HCSMMF195"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.056 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2128 Request: {"Cycle":3,"Lane":8,"Tile":2128,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF178","HCSMMF219","HCSMMF231"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.057 -08 000000089 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2127 Request: {"Cycle":3,"Lane":8,"Tile":2127,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF204","HCSMMF196","HCSMMF222","HCSMMF240"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.057 -08 000000080 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2125 Request: {"Cycle":3,"Lane":8,"Tile":2125,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF228","HCSMMF215","HCSMMF248","HCSMMF197"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.058 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2123 Request: {"Cycle":3,"Lane":8,"Tile":2123,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF274","HCSMMF285","HCSMMF214","HCSMMF224"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.059 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2124 Request: {"Cycle":3,"Lane":8,"Tile":2124,"Channels":["A","C","G","T"],"MemoryMappedFileNames":["HCSMMF247","HCSMMF199","HCSMMF242","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.062 -08 000000051 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2122 Request: {"Cycle":3,"Lane":8,"Tile":2122,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF184","HCSMMF253","HCSMMF194","HCSMMF226"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.063 -08 000000090 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2126 Request: {"Cycle":3,"Lane":8,"Tile":2126,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF211","HCSMMF216","HCSMMF277","HCSMMF243"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:43.066 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:43.072 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:30:43.085 -08 000000052 INF: FPGA: Recv TDIBB
17-02-28 20:30:43.085 -08 000000102 INF: ===================Initializing FPGA for ITF Focus===================
17-02-28 20:30:43.087 -08 000000064 INF: X Motor: Recv PR VI\r\n410\r\n>
17-02-28 20:30:43.087 -08 000000064 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.000977 mm/sec), 'Velocity' property = 15 mm/sec
17-02-28 20:30:43.087 -08 000000064 INF: X Motor: Moving to 89.0815 mm @15.000 mm/sec, started at 87.9795 mm
17-02-28 20:30:43.087 -08 000000102 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus===================
17-02-28 20:30:43.087 -08 000000064 INF: X Motor: Xmit MA 12321\n
17-02-28 20:30:43.087 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:43.088 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:30:43.088 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:43.089 -08 000000102 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor===================
17-02-28 20:30:43.089 -08 000000102 INF: Z Motor: Set Z velocity to 1.391 mm/s / 1792263 16.16 format
17-02-28 20:30:43.089 -08 000000102 INF: FPGA: Xmit ZSTEP 1792263\n
17-02-28 20:30:43.148 -08 000000100 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:43.148 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:43.149 -08 000000064 INF: X Motor: Recv MA 12321\r\n>
17-02-28 20:30:43.149 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:30:43.149 -08 000000077 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:43.149 -08 000000064 INF: X Motor: WaitUntilStopped 60073
17-02-28 20:30:43.149 -08 000000077 INF: Y Motor: Set target position to 5957828 encoder counts
17-02-28 20:30:43.149 -08 000000077 INF: Y Motor: Xmit s r0xca 5957828\r
17-02-28 20:30:43.150 -08 000000102 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y===================
17-02-28 20:30:43.150 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:43.152 -08 000000102 INF: ===================TDI Scan Setup, Serial, Arm Z Motor===================
17-02-28 20:30:43.152 -08 000000102 INF: Z Motor: Entering ArmAbsStepped
17-02-28 20:30:43.152 -08 000000102 INF: Z Motor: Arming to move to -0.0613 mm
17-02-28 20:30:43.152 -08 000000102 INF: FPGA: Xmit ZYT 6437828 4\n
17-02-28 20:30:43.157 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:43.157 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:30:43.193 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:43.199 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:30:43.212 -08 000000090 INF: FPGA: Recv ZYT 
17-02-28 20:30:43.212 -08 000000102 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1492823 enc / 14.928 mm / ) = 6437828 enc / 64.378 mm
17-02-28 20:30:43.212 -08 000000102 INF: FPGA: Xmit ZARM 16058\n
17-02-28 20:30:43.214 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:30:43.214 -08 000000077 INF: Y Motor: Start the move command
17-02-28 20:30:43.214 -08 000000077 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:43.274 -08 000000105 INF: FPGA: Recv ZARM
17-02-28 20:30:43.274 -08 000000102 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8587 ms
17-02-28 20:30:43.274 -08 000000102 INF: Z Motor: ArmAbsStepped took 121.9337 ms
17-02-28 20:30:43.274 -08 000000102 INF: ===================TDI Scan Setup, Serial===================
17-02-28 20:30:43.276 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:30:43.276 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:30:43.276 -08 000000077 INF: Y Motor: WaitUntilStopped 61986
17-02-28 20:30:43.276 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:43.277 -08 000000102 INF: ===================TDI Scan Setup, FPGA Set Image Mode===================
17-02-28 20:30:43.278 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:30:43.279 -08 000000102 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger===================
17-02-28 20:30:43.280 -08 000000102 INF: ===================TDI Scan Setup===================
17-02-28 20:30:43.281 -08 000000102 INF: ======================================
17-02-28 20:30:43.316 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:43.322 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:30:43.400 -08 000000077 INF: Y Motor: Unshifted Position: 1074374
17-02-28 20:30:43.419 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:43.425 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:30:43.450 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:43.576 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:43.605 -08 000000069 INF: Camera #0 AttachBuffer (imageDataPtr = 60599242800 imgPtr = 60599242800 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:30:43.606 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 0 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:30:43.607 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:43.607 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 0... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:43.622 -08 000000069 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:43.624 -08 000000069 INF: ===================Camera Arm TDI, Serial, Camera TDI===================
17-02-28 20:30:43.713 -08 000000077 INF: Y Motor: Unshifted Position: 1774496
17-02-28 20:30:43.763 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:43.775 -08 000000064 INF: X Motor: Xmit PR ER\n
17-02-28 20:30:43.839 -08 000000064 INF: X Motor: Recv PR ER\r\n0\r\n>
17-02-28 20:30:43.839 -08 000000064 INF: X Motor: Moved to 89.0806 after 690 ms
17-02-28 20:30:43.839 -08 000000064 INF: ======================================
17-02-28 20:30:43.887 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:43.895 -08 000000049 INF: ===================Image Analysis Flow Cell B 01===================
17-02-28 20:30:44.023 -08 000000077 INF: Y Motor: Unshifted Position: 2557841
17-02-28 20:30:44.073 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:44.198 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:44.230 -08 000000069 INF: Camera #2 AttachBuffer (imageDataPtr = 62411182128 imgPtr = 63317151792 , attachBufferNumFrames = 544 , frameSize = 1638400,
17-02-28 20:30:44.230 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 2 (cameraMode TDI_1x1, ImageLines 139264
17-02-28 20:30:44.231 -08 000000069 INF: CameraArmTDI CameraBaseSensorPath: 2... SensorModeLineBundleHeight = 512, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 6400, VertSize = 64)
17-02-28 20:30:44.247 -08 000000069 INF: ===================Camera Arm TDI, Serial===================
17-02-28 20:30:44.249 -08 000000069 INF: ===================Camera Arm TDI===================
17-02-28 20:30:44.251 -08 000000069 INF: ======================================
17-02-28 20:30:44.252 -08 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA===================
17-02-28 20:30:44.254 -08 000000037 INF: ======================================
17-02-28 20:30:44.337 -08 000000077 INF: Y Motor: Unshifted Position: 3336118
17-02-28 20:30:44.387 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:44.511 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:44.649 -08 000000077 INF: Y Motor: Unshifted Position: 4118688
17-02-28 20:30:44.699 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:44.826 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:44.960 -08 000000077 INF: Y Motor: Unshifted Position: 4901129
17-02-28 20:30:45.010 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:45.135 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:45.271 -08 000000077 INF: Y Motor: Unshifted Position: 5678360
17-02-28 20:30:45.321 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:45.448 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:45.584 -08 000000077 INF: Y Motor: Unshifted Position: 5957832
17-02-28 20:30:45.584 -08 000000077 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:45.584 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:45.646 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:30:45.646 -08 000000077 INF: Y Motor: Moved to 64.5783 after 2370 ms
17-02-28 20:30:45.646 -08 000000077 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:45.710 -08 000000077 INF: Y Motor: Recv v 4096\r
17-02-28 20:30:45.710 -08 000000077 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:45.710 -08 000000077 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:45.770 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:30:45.770 -08 000000077 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:45.770 -08 000000077 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:45.832 -08 000000077 INF: Y Motor: Recv v 402653184\r
17-02-28 20:30:45.832 -08 000000077 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x18000000), Bit27=Trajectory running or not settled., Bit28=Velocity window exceeded.
17-02-28 20:30:45.832 -08 000000077 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:45.832 -08 000000077 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:45.897 -08 000000077 INF: Y Motor: Recv v 0\r
17-02-28 20:30:45.897 -08 000000077 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:45.897 -08 000000077 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:45.897 -08 000000077 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:45.959 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:30:45.959 -08 000000077 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:45.959 -08 000000077 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:46.021 -08 000000077 INF: Y Motor: Recv ok\r
17-02-28 20:30:46.021 -08 000000077 INF: ======================================
17-02-28 20:30:46.022 -08 000000068 INF: ===================Move X,Y===================
17-02-28 20:30:46.024 -08 000000068 INF: ======================================
17-02-28 20:30:46.025 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Moving motors===================
17-02-28 20:30:46.026 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:46.026 -08 000000042 INF: Y Motor: Set max velocity (6500000), unit is 0.1 counts/sec
17-02-28 20:30:46.026 -08 000000042 INF: Y Motor: Xmit s r0xcb 6500000\r
17-02-28 20:30:46.083 -08 000000042 INF: Y Motor: Recv ok\r
17-02-28 20:30:46.083 -08 000000042 INF: FPGA: Xmit ZFREQCL 2123\n
17-02-28 20:30:46.143 -08 000000092 INF: FPGA: Recv ZFREQCL
17-02-28 20:30:46.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Reporting Motor Positions===================
17-02-28 20:30:46.143 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:46.144 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:46.209 -08 000000104 INF: FPGA: Recv TDIYERD 6457829
17-02-28 20:30:46.210 -08 000000042 INF: Before scan, Y encoder from FPGA = 6457829 counts (64.578 mm)
17-02-28 20:30:46.210 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:46.211 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:46.211 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:30:46.212 -08 000000029 INF: ===================Set YMotor gains for scans===================
17-02-28 20:30:46.212 -08 000000029 INF: ======================================
17-02-28 20:30:46.212 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:46.213 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command===================
17-02-28 20:30:46.213 -08 000000077 INF: FPGA: Xmit TDIYPOS 6346903\n
17-02-28 20:30:46.269 -08 000000103 INF: FPGA: Recv TDIYPOS
17-02-28 20:30:46.269 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:46.271 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI===================
17-02-28 20:30:46.271 -08 000000077 INF: FPGA: Xmit TDIYARM3 139264 6437828 1 1\n
17-02-28 20:30:46.332 -08 000000058 INF: FPGA: Recv TDIYARM3
17-02-28 20:30:46.332 -08 000000077 INF: ===================TDI FPGA Arm, Arm FPGA===================
17-02-28 20:30:46.334 -08 000000077 INF: ===================TDI FPGA Arm===================
17-02-28 20:30:46.335 -08 000000077 INF: ======================================
17-02-28 20:30:46.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Arm Scan and Set YMotor Gain===================
17-02-28 20:30:46.336 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:46.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:46.337 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:46.338 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:46.338 -08 000000074 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'===================
17-02-28 20:30:46.338 -08 000000079 INF: ===================Move Excitation Filter 1 (G) to 'OD0.2'===================
17-02-28 20:30:46.339 -08 000000074 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2)
17-02-28 20:30:46.339 -08 000000074 INF: Excitation Filter 2: Moving to 225.0000 degrees
17-02-28 20:30:46.339 -08 000000074 INF: Excitation Filter 2: Moving -107 steps
17-02-28 20:30:46.339 -08 000000074 INF: FPGA: Xmit EX2MV -107\n
17-02-28 20:30:46.339 -08 000000079 INF: Excitation Filter 1: Moving 'G' to index 5 (OD0.2)
17-02-28 20:30:46.339 -08 000000079 INF: Excitation Filter 1: Moving to 225.0000 degrees
17-02-28 20:30:46.339 -08 000000079 INF: Excitation Filter 1: Moving -107 steps
17-02-28 20:30:46.340 -08 000000079 INF: FPGA: Xmit EX1MV -107\n
17-02-28 20:30:46.768 -08 000000103 INF: FPGA: Recv EX2MV
17-02-28 20:30:46.768 -08 000000103 INF: FPGA: Recv EX1MV
17-02-28 20:30:46.768 -08 000000079 INF: Excitation Filter 1: Moved -107 steps in 429.0593 ms
17-02-28 20:30:46.768 -08 000000079 INF: Excitation Filter 1: Moved to 224.7190 degrees (target was 225.0000) in 429.2441 ms
17-02-28 20:30:46.768 -08 000000079 INF: Excitation Filter 1: Moved 'G' to index 5 (OD0.2) in 429.3497 ms
17-02-28 20:30:46.768 -08 000000074 INF: Excitation Filter 2: Moved -107 steps in 429.2763 ms
17-02-28 20:30:46.768 -08 000000074 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 429.6892 ms
17-02-28 20:30:46.768 -08 000000074 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.7603 ms
17-02-28 20:30:46.768 -08 000000079 INF: ======================================
17-02-28 20:30:46.769 -08 000000074 INF: ======================================
17-02-28 20:30:46.770 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:46.771 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:46.772 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:30:46.772 -08 000000105 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:46.772 -08 000000104 INF: ===================FPGA Z Wait===================
17-02-28 20:30:46.772 -08 000000058 INF: ===================Move Y Motor without settling===================
17-02-28 20:30:46.772 -08 000000104 INF: FPGA: Xmit ZWAIT\n
17-02-28 20:30:46.772 -08 000000058 INF: Y Motor: Moving to 14.9299 mm @6.500 mm/sec, started at 64.5783 mm
17-02-28 20:30:46.772 -08 000000058 INF: Y Motor: Before move, after clearing latch: Clear latched fault status
17-02-28 20:30:46.772 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:46.772 -08 000000069 INF: ===================Camera TDI, Parallel===================
17-02-28 20:30:46.772 -08 000000105 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI===================
17-02-28 20:30:46.773 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:30:46.773 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:30:46.775 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:46.775 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:46.776 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:46.776 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:46.778 -08 000000105 INF: FPGA: Xmit TDIYWAIT\n
17-02-28 20:30:46.834 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:30:46.834 -08 000000058 INF: Y Motor: Clear latched amplifier status: Before move, after clearing latch
17-02-28 20:30:46.834 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:46.896 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:30:46.896 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:46.925 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:46.925 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:46.926 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:46.926 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:46.958 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:30:46.958 -08 000000058 INF: Y Motor: Before move, after clearing latch: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:46.958 -08 000000058 INF: Y Motor: Set target position to 992994 encoder counts
17-02-28 20:30:46.958 -08 000000058 INF: Y Motor: Xmit s r0xca 992994\r
17-02-28 20:30:47.020 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:30:47.020 -08 000000058 INF: Y Motor: Start the move command
17-02-28 20:30:47.020 -08 000000058 INF: Y Motor: Xmit t 1\r
17-02-28 20:30:47.075 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:47.075 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:47.076 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = -1, frameCount = 0.
17-02-28 20:30:47.076 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 0
17-02-28 20:30:47.082 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:30:47.082 -08 000000058 INF: Y Motor: WaitUntilStopped 67638
17-02-28 20:30:47.082 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:47.142 -08 000000050 INF: FPGA: Recv ZWAIT 
17-02-28 20:30:47.143 -08 000000104 INF: ======================================
17-02-28 20:30:47.208 -08 000000058 INF: Y Motor: Unshifted Position: 5895978
17-02-28 20:30:47.225 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:30:47.225 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:30:47.225 -08 000000052 INF: ===================Camera #2 Frame #5===================
17-02-28 20:30:47.226 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 4, frameCount = 5.
17-02-28 20:30:47.226 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 5
17-02-28 20:30:47.226 -08 000000039 INF: ===================Camera #0 Frame #5===================
17-02-28 20:30:47.258 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:47.382 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:47.398 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:30:47.398 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:30:47.398 -08 000000039 INF: ===================Camera #0 Frame #11===================
17-02-28 20:30:47.399 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 10, frameCount = 11.
17-02-28 20:30:47.399 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 11
17-02-28 20:30:47.399 -08 000000052 INF: ===================Camera #2 Frame #11===================
17-02-28 20:30:47.518 -08 000000058 INF: Y Motor: Unshifted Position: 5692960
17-02-28 20:30:47.568 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:47.570 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:30:47.570 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:30:47.570 -08 000000039 INF: ===================Camera #0 Frame #17===================
17-02-28 20:30:47.576 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 16, frameCount = 17.
17-02-28 20:30:47.576 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 17
17-02-28 20:30:47.576 -08 000000052 INF: ===================Camera #2 Frame #17===================
17-02-28 20:30:47.695 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:47.744 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:30:47.744 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:30:47.744 -08 000000039 INF: ===================Camera #0 Frame #24===================
17-02-28 20:30:47.754 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 23, frameCount = 24.
17-02-28 20:30:47.754 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 24
17-02-28 20:30:47.754 -08 000000052 INF: ===================Camera #2 Frame #24===================
17-02-28 20:30:47.831 -08 000000058 INF: Y Motor: Unshifted Position: 5489513
17-02-28 20:30:47.881 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:47.925 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 29, frameCount = 30.
17-02-28 20:30:47.925 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 30
17-02-28 20:30:47.925 -08 000000039 INF: ===================Camera #0 Frame #30===================
17-02-28 20:30:47.937 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 30, frameCount = 31.
17-02-28 20:30:47.937 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 31
17-02-28 20:30:47.937 -08 000000052 INF: ===================Camera #2 Frame #31===================
17-02-28 20:30:48.005 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.101 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:30:48.101 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:30:48.101 -08 000000039 INF: ===================Camera #0 Frame #37===================
17-02-28 20:30:48.110 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 36, frameCount = 37.
17-02-28 20:30:48.110 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 37
17-02-28 20:30:48.110 -08 000000052 INF: ===================Camera #2 Frame #37===================
17-02-28 20:30:48.144 -08 000000058 INF: Y Motor: Unshifted Position: 5285843
17-02-28 20:30:48.194 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.277 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 42, frameCount = 43.
17-02-28 20:30:48.277 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 43
17-02-28 20:30:48.277 -08 000000039 INF: ===================Camera #0 Frame #43===================
17-02-28 20:30:48.288 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 43, frameCount = 44.
17-02-28 20:30:48.288 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 44
17-02-28 20:30:48.288 -08 000000052 INF: ===================Camera #2 Frame #44===================
17-02-28 20:30:48.319 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.453 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:30:48.453 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:30:48.453 -08 000000039 INF: ===================Camera #0 Frame #50===================
17-02-28 20:30:48.455 -08 000000058 INF: Y Motor: Unshifted Position: 5083685
17-02-28 20:30:48.464 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 49, frameCount = 50.
17-02-28 20:30:48.464 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 50
17-02-28 20:30:48.464 -08 000000052 INF: ===================Camera #2 Frame #50===================
17-02-28 20:30:48.505 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.629 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.633 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:30:48.633 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:30:48.633 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 55, frameCount = 56.
17-02-28 20:30:48.633 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 56
17-02-28 20:30:48.633 -08 000000039 INF: ===================Camera #0 Frame #56===================
17-02-28 20:30:48.633 -08 000000052 INF: ===================Camera #2 Frame #56===================
17-02-28 20:30:48.768 -08 000000058 INF: Y Motor: Unshifted Position: 4880026
17-02-28 20:30:48.804 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:30:48.804 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:30:48.804 -08 000000039 INF: ===================Camera #0 Frame #63===================
17-02-28 20:30:48.805 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 62, frameCount = 63.
17-02-28 20:30:48.805 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 63
17-02-28 20:30:48.805 -08 000000052 INF: ===================Camera #2 Frame #63===================
17-02-28 20:30:48.818 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.942 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:48.979 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:30:48.979 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:30:48.979 -08 000000052 INF: ===================Camera #2 Frame #69===================
17-02-28 20:30:48.985 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 68, frameCount = 69.
17-02-28 20:30:48.985 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 69
17-02-28 20:30:48.985 -08 000000039 INF: ===================Camera #0 Frame #69===================
17-02-28 20:30:49.078 -08 000000058 INF: Y Motor: Unshifted Position: 4678529
17-02-28 20:30:49.128 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:49.157 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:30:49.157 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:30:49.157 -08 000000052 INF: ===================Camera #2 Frame #76===================
17-02-28 20:30:49.162 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 75, frameCount = 76.
17-02-28 20:30:49.162 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 76
17-02-28 20:30:49.162 -08 000000039 INF: ===================Camera #0 Frame #76===================
17-02-28 20:30:49.255 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:49.330 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:30:49.330 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:30:49.330 -08 000000052 INF: ===================Camera #2 Frame #82===================
17-02-28 20:30:49.341 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 81, frameCount = 82.
17-02-28 20:30:49.341 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 82
17-02-28 20:30:49.341 -08 000000039 INF: ===================Camera #0 Frame #82===================
17-02-28 20:30:49.393 -08 000000058 INF: Y Motor: Unshifted Position: 4474201
17-02-28 20:30:49.443 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:49.499 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 87, frameCount = 88.
17-02-28 20:30:49.499 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 88
17-02-28 20:30:49.499 -08 000000052 INF: ===================Camera #2 Frame #88===================
17-02-28 20:30:49.509 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 88, frameCount = 89.
17-02-28 20:30:49.509 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 89
17-02-28 20:30:49.509 -08 000000039 INF: ===================Camera #0 Frame #89===================
17-02-28 20:30:49.566 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:49.668 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 93, frameCount = 94.
17-02-28 20:30:49.668 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 94
17-02-28 20:30:49.668 -08 000000052 INF: ===================Camera #2 Frame #94===================
17-02-28 20:30:49.681 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 94, frameCount = 95.
17-02-28 20:30:49.681 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 95
17-02-28 20:30:49.681 -08 000000039 INF: ===================Camera #0 Frame #95===================
17-02-28 20:30:49.702 -08 000000058 INF: Y Motor: Unshifted Position: 4272698
17-02-28 20:30:49.752 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:49.837 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:30:49.837 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:30:49.837 -08 000000052 INF: ===================Camera #2 Frame #101===================
17-02-28 20:30:49.849 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 100, frameCount = 101.
17-02-28 20:30:49.849 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 101
17-02-28 20:30:49.849 -08 000000039 INF: ===================Camera #0 Frame #101===================
17-02-28 20:30:49.880 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.009 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:30:50.009 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:30:50.009 -08 000000052 INF: ===================Camera #2 Frame #107===================
17-02-28 20:30:50.015 -08 000000058 INF: Y Motor: Unshifted Position: 4069030
17-02-28 20:30:50.017 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 106, frameCount = 107.
17-02-28 20:30:50.017 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 107
17-02-28 20:30:50.017 -08 000000039 INF: ===================Camera #0 Frame #107===================
17-02-28 20:30:50.065 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.178 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 112, frameCount = 113.
17-02-28 20:30:50.178 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 113
17-02-28 20:30:50.178 -08 000000052 INF: ===================Camera #2 Frame #113===================
17-02-28 20:30:50.185 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 113, frameCount = 114.
17-02-28 20:30:50.185 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 114
17-02-28 20:30:50.185 -08 000000039 INF: ===================Camera #0 Frame #114===================
17-02-28 20:30:50.190 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.328 -08 000000058 INF: Y Motor: Unshifted Position: 3867530
17-02-28 20:30:50.347 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 118, frameCount = 119.
17-02-28 20:30:50.347 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 119
17-02-28 20:30:50.347 -08 000000052 INF: ===================Camera #2 Frame #119===================
17-02-28 20:30:50.356 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 119, frameCount = 120.
17-02-28 20:30:50.356 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 120
17-02-28 20:30:50.356 -08 000000039 INF: ===================Camera #0 Frame #120===================
17-02-28 20:30:50.378 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.503 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.518 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:30:50.518 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:30:50.518 -08 000000052 INF: ===================Camera #2 Frame #126===================
17-02-28 20:30:50.526 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 125, frameCount = 126.
17-02-28 20:30:50.526 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 126
17-02-28 20:30:50.526 -08 000000039 INF: ===================Camera #0 Frame #126===================
17-02-28 20:30:50.638 -08 000000058 INF: Y Motor: Unshifted Position: 3663859
17-02-28 20:30:50.688 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.691 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:30:50.691 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:30:50.691 -08 000000052 INF: ===================Camera #2 Frame #132===================
17-02-28 20:30:50.695 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 131, frameCount = 132.
17-02-28 20:30:50.695 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 132
17-02-28 20:30:50.695 -08 000000039 INF: ===================Camera #0 Frame #132===================
17-02-28 20:30:50.815 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:50.860 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:30:50.860 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:30:50.860 -08 000000052 INF: ===================Camera #2 Frame #138===================
17-02-28 20:30:50.863 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 137, frameCount = 138.
17-02-28 20:30:50.863 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 138
17-02-28 20:30:50.863 -08 000000039 INF: ===================Camera #0 Frame #138===================
17-02-28 20:30:50.951 -08 000000058 INF: Y Motor: Unshifted Position: 3460419
17-02-28 20:30:51.001 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:51.029 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:30:51.029 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:30:51.029 -08 000000052 INF: ===================Camera #2 Frame #145===================
17-02-28 20:30:51.031 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 144, frameCount = 145.
17-02-28 20:30:51.031 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 145
17-02-28 20:30:51.031 -08 000000039 INF: ===================Camera #0 Frame #145===================
17-02-28 20:30:51.127 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:51.201 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:30:51.201 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:30:51.201 -08 000000052 INF: ===================Camera #2 Frame #151===================
17-02-28 20:30:51.202 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 150, frameCount = 151.
17-02-28 20:30:51.202 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 151
17-02-28 20:30:51.202 -08 000000039 INF: ===================Camera #0 Frame #151===================
17-02-28 20:30:51.264 -08 000000058 INF: Y Motor: Unshifted Position: 3253926
17-02-28 20:30:51.314 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:51.370 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:30:51.370 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:30:51.370 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 156, frameCount = 157.
17-02-28 20:30:51.370 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 157
17-02-28 20:30:51.370 -08 000000039 INF: ===================Camera #0 Frame #157===================
17-02-28 20:30:51.370 -08 000000052 INF: ===================Camera #2 Frame #157===================
17-02-28 20:30:51.438 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:51.540 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:30:51.540 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 162, frameCount = 163.
17-02-28 20:30:51.540 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:30:51.540 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 163
17-02-28 20:30:51.540 -08 000000052 INF: ===================Camera #2 Frame #163===================
17-02-28 20:30:51.540 -08 000000039 INF: ===================Camera #0 Frame #163===================
17-02-28 20:30:51.574 -08 000000058 INF: Y Motor: Unshifted Position: 3055254
17-02-28 20:30:51.624 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:51.708 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:30:51.708 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:30:51.708 -08 000000039 INF: ===================Camera #0 Frame #170===================
17-02-28 20:30:51.709 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 169, frameCount = 170.
17-02-28 20:30:51.709 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 170
17-02-28 20:30:51.709 -08 000000052 INF: ===================Camera #2 Frame #170===================
17-02-28 20:30:51.751 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:51.879 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:30:51.879 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:30:51.879 -08 000000039 INF: ===================Camera #0 Frame #176===================
17-02-28 20:30:51.881 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 175, frameCount = 176.
17-02-28 20:30:51.881 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 176
17-02-28 20:30:51.881 -08 000000052 INF: ===================Camera #2 Frame #176===================
17-02-28 20:30:51.887 -08 000000058 INF: Y Motor: Unshifted Position: 2851582
17-02-28 20:30:51.937 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.047 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:30:52.047 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:30:52.047 -08 000000039 INF: ===================Camera #0 Frame #182===================
17-02-28 20:30:52.050 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 181, frameCount = 182.
17-02-28 20:30:52.050 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 182
17-02-28 20:30:52.050 -08 000000052 INF: ===================Camera #2 Frame #182===================
17-02-28 20:30:52.061 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.200 -08 000000058 INF: Y Motor: Unshifted Position: 2650092
17-02-28 20:30:52.215 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:30:52.215 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:30:52.215 -08 000000039 INF: ===================Camera #0 Frame #188===================
17-02-28 20:30:52.219 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 187, frameCount = 188.
17-02-28 20:30:52.219 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 188
17-02-28 20:30:52.219 -08 000000052 INF: ===================Camera #2 Frame #188===================
17-02-28 20:30:52.250 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.376 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.383 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 193, frameCount = 194.
17-02-28 20:30:52.383 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 194
17-02-28 20:30:52.383 -08 000000039 INF: ===================Camera #0 Frame #194===================
17-02-28 20:30:52.388 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 194, frameCount = 195.
17-02-28 20:30:52.388 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 195
17-02-28 20:30:52.388 -08 000000052 INF: ===================Camera #2 Frame #195===================
17-02-28 20:30:52.511 -08 000000058 INF: Y Motor: Unshifted Position: 2445778
17-02-28 20:30:52.551 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:30:52.551 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:30:52.551 -08 000000039 INF: ===================Camera #0 Frame #201===================
17-02-28 20:30:52.560 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 200, frameCount = 201.
17-02-28 20:30:52.560 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 201
17-02-28 20:30:52.560 -08 000000052 INF: ===================Camera #2 Frame #201===================
17-02-28 20:30:52.561 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.685 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.722 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:30:52.722 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:30:52.722 -08 000000039 INF: ===================Camera #0 Frame #207===================
17-02-28 20:30:52.729 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 206, frameCount = 207.
17-02-28 20:30:52.729 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 207
17-02-28 20:30:52.729 -08 000000052 INF: ===================Camera #2 Frame #207===================
17-02-28 20:30:52.825 -08 000000058 INF: Y Motor: Unshifted Position: 2244062
17-02-28 20:30:52.875 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:52.890 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:30:52.890 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:30:52.890 -08 000000039 INF: ===================Camera #0 Frame #213===================
17-02-28 20:30:52.898 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 212, frameCount = 213.
17-02-28 20:30:52.898 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 213
17-02-28 20:30:52.898 -08 000000052 INF: ===================Camera #2 Frame #213===================
17-02-28 20:30:52.998 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:53.058 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 218, frameCount = 219.
17-02-28 20:30:53.058 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 219
17-02-28 20:30:53.058 -08 000000039 INF: ===================Camera #0 Frame #219===================
17-02-28 20:30:53.067 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 219, frameCount = 220.
17-02-28 20:30:53.067 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 220
17-02-28 20:30:53.067 -08 000000052 INF: ===================Camera #2 Frame #220===================
17-02-28 20:30:53.134 -08 000000058 INF: Y Motor: Unshifted Position: 2040609
17-02-28 20:30:53.184 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:53.226 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 224, frameCount = 225.
17-02-28 20:30:53.226 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 225
17-02-28 20:30:53.226 -08 000000039 INF: ===================Camera #0 Frame #225===================
17-02-28 20:30:53.239 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 225, frameCount = 226.
17-02-28 20:30:53.239 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 226
17-02-28 20:30:53.239 -08 000000052 INF: ===================Camera #2 Frame #226===================
17-02-28 20:30:53.311 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:53.394 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:30:53.394 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:30:53.394 -08 000000039 INF: ===================Camera #0 Frame #232===================
17-02-28 20:30:53.408 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 231, frameCount = 232.
17-02-28 20:30:53.408 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 232
17-02-28 20:30:53.408 -08 000000052 INF: ===================Camera #2 Frame #232===================
17-02-28 20:30:53.448 -08 000000058 INF: Y Motor: Unshifted Position: 1838458
17-02-28 20:30:53.498 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:53.565 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:30:53.565 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:30:53.565 -08 000000039 INF: ===================Camera #0 Frame #238===================
17-02-28 20:30:53.577 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 237, frameCount = 238.
17-02-28 20:30:53.577 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 238
17-02-28 20:30:53.577 -08 000000052 INF: ===================Camera #2 Frame #238===================
17-02-28 20:30:53.622 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:53.733 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 243, frameCount = 244.
17-02-28 20:30:53.733 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 244
17-02-28 20:30:53.733 -08 000000039 INF: ===================Camera #0 Frame #244===================
17-02-28 20:30:53.746 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 244, frameCount = 245.
17-02-28 20:30:53.746 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 245
17-02-28 20:30:53.746 -08 000000052 INF: ===================Camera #2 Frame #245===================
17-02-28 20:30:53.758 -08 000000058 INF: Y Motor: Unshifted Position: 1633489
17-02-28 20:30:53.808 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:53.902 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 249, frameCount = 250.
17-02-28 20:30:53.902 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 250
17-02-28 20:30:53.902 -08 000000039 INF: ===================Camera #0 Frame #250===================
17-02-28 20:30:53.919 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 250, frameCount = 251.
17-02-28 20:30:53.919 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 251
17-02-28 20:30:53.919 -08 000000052 INF: ===================Camera #2 Frame #251===================
17-02-28 20:30:53.932 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:54.070 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:30:54.070 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:30:54.070 -08 000000039 INF: ===================Camera #0 Frame #257===================
17-02-28 20:30:54.072 -08 000000058 INF: Y Motor: Unshifted Position: 1432636
17-02-28 20:30:54.088 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 256, frameCount = 257.
17-02-28 20:30:54.088 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 257
17-02-28 20:30:54.088 -08 000000052 INF: ===================Camera #2 Frame #257===================
17-02-28 20:30:54.122 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:54.241 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:30:54.241 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:30:54.241 -08 000000039 INF: ===================Camera #0 Frame #263===================
17-02-28 20:30:54.246 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:54.257 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 262, frameCount = 263.
17-02-28 20:30:54.257 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 263
17-02-28 20:30:54.257 -08 000000052 INF: ===================Camera #2 Frame #263===================
17-02-28 20:30:54.386 -08 000000058 INF: Y Motor: Unshifted Position: 1229601
17-02-28 20:30:54.409 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 268, frameCount = 269.
17-02-28 20:30:54.409 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 269
17-02-28 20:30:54.409 -08 000000039 INF: ===================Camera #0 Frame #269===================
17-02-28 20:30:54.426 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 269, frameCount = 270.
17-02-28 20:30:54.426 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 270
17-02-28 20:30:54.426 -08 000000052 INF: ===================Camera #2 Frame #270===================
17-02-28 20:30:54.436 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:54.506 -08 000000035 INF: FPGA: Recv TDIYWAIT
17-02-28 20:30:54.506 -08 000000105 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:54.508 -08 000000105 INF: ===================Wait for frames then close excitation filters, Close excitation filters===================
17-02-28 20:30:54.509 -08 000000062 INF: ===================Move Excitation Filter 2 to 'BlockPosition'===================
17-02-28 20:30:54.509 -08 000000038 INF: ===================Move Excitation Filter 1 to 'BlockPosition'===================
17-02-28 20:30:54.509 -08 000000062 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition)
17-02-28 20:30:54.509 -08 000000062 INF: Excitation Filter 2: Moving to 0.0000 degrees
17-02-28 20:30:54.509 -08 000000062 INF: Excitation Filter 2: Moving 107 steps
17-02-28 20:30:54.509 -08 000000038 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition)
17-02-28 20:30:54.509 -08 000000062 INF: FPGA: Xmit EX2MV 107\n
17-02-28 20:30:54.509 -08 000000038 INF: Excitation Filter 1: Moving to 0.0000 degrees
17-02-28 20:30:54.509 -08 000000038 INF: Excitation Filter 1: Moving 107 steps
17-02-28 20:30:54.510 -08 000000038 INF: FPGA: Xmit EX1MV 107\n
17-02-28 20:30:54.558 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:54.577 -08 000000039 INF: Camera #0 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:54.577 -08 000000039 INF: Camera #0 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:54.577 -08 000000039 INF: ===================Camera #0 Frame #272===================
17-02-28 20:30:54.586 -08 000000039 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:54.587 -08 000000039 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:54.694 -08 000000058 INF: Y Motor: Unshifted Position: 1026166
17-02-28 20:30:54.717 -08 000000039 INF: Camera #0 ReleaseBuffer
17-02-28 20:30:54.717 -08 000000052 INF: Camera #2 called GetTransferInfo, newestFrameIndex = 271, frameCount = 272.
17-02-28 20:30:54.717 -08 000000052 INF: Camera #2 called GetCurrentFrameReceived, frameHasDataTotalFramesReceived = 272
17-02-28 20:30:54.717 -08 000000052 INF: ===================Camera #2 Frame #272===================
17-02-28 20:30:54.717 -08 000000039 INF: ===================Camera TDI===================
17-02-28 20:30:54.724 -08 000000052 INF: Camera complete - got 272 frames, processed 272 frames, expected 272 frames.
17-02-28 20:30:54.725 -08 000000052 INF: ===================CameraTDI Cleanup===================
17-02-28 20:30:54.744 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMoving
17-02-28 20:30:54.747 -08 000000039 INF: ======================================
17-02-28 20:30:54.882 -08 000000050 INF: FPGA: Recv EX2MV
17-02-28 20:30:54.882 -08 000000050 INF: FPGA: Recv EX1MV
17-02-28 20:30:54.882 -08 000000038 INF: Excitation Filter 1: Moved 107 steps in 373.2535 ms
17-02-28 20:30:54.882 -08 000000062 INF: Excitation Filter 2: Moved 107 steps in 373.4737 ms
17-02-28 20:30:54.882 -08 000000062 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 373.6307 ms
17-02-28 20:30:54.882 -08 000000062 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 373.7398 ms
17-02-28 20:30:54.883 -08 000000038 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 373.4441 ms
17-02-28 20:30:54.883 -08 000000038 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 373.8303 ms
17-02-28 20:30:54.883 -08 000000062 INF: ======================================
17-02-28 20:30:54.883 -08 000000038 INF: ======================================
17-02-28 20:30:54.884 -08 000000058 INF: Y Motor: Unshifted Position: 992995
17-02-28 20:30:54.884 -08 000000058 INF: Y Motor: Get amplifier status: UpdateMotorStatus
17-02-28 20:30:54.884 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:54.885 -08 000000105 INF: ===================Wait for frames then close excitation filters===================
17-02-28 20:30:54.886 -08 000000105 INF: ======================================
17-02-28 20:30:54.901 -08 000000052 INF: Camera #2 ReleaseBuffer
17-02-28 20:30:54.901 -08 000000052 INF: ===================Camera TDI===================
17-02-28 20:30:54.936 -08 000000052 INF: ======================================
17-02-28 20:30:54.937 -08 000000069 INF: ===================Camera TDI===================
17-02-28 20:30:54.939 -08 000000069 INF: ======================================
17-02-28 20:30:54.948 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:30:54.948 -08 000000058 INF: Y Motor: Moved to 14.9300 after 7866 ms
17-02-28 20:30:54.948 -08 000000058 INF: Y Motor: Xmit g r0xc9\r
17-02-28 20:30:55.008 -08 000000058 INF: Y Motor: Recv v 4097\r
17-02-28 20:30:55.008 -08 000000058 INF: Y Motor: Status After move finished OK:
17-02-28 20:30:55.008 -08 000000058 INF: Y Motor: Xmit g r0xa0\r
17-02-28 20:30:55.070 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:30:55.070 -08 000000058 INF: Y Motor: After move finished OK: The following amplifier status register (g r0xa0) bits are set (value = 0x00000000)
17-02-28 20:30:55.070 -08 000000058 INF: Y Motor: Xmit g r0xa1\r
17-02-28 20:30:55.132 -08 000000058 INF: Y Motor: Recv v 134217728\r
17-02-28 20:30:55.132 -08 000000058 INF: Y Motor: After move finished OK: The following latched amplifier status register (g r0xa1) bits are set (value = 0x08000000), Bit27=Trajectory running or not settled.
17-02-28 20:30:55.132 -08 000000058 INF: Y Motor: Get latched fault status: After move finished OK
17-02-28 20:30:55.132 -08 000000058 INF: Y Motor: Xmit g r0xa4\r
17-02-28 20:30:55.194 -08 000000058 INF: Y Motor: Recv v 0\r
17-02-28 20:30:55.194 -08 000000058 INF: Y Motor: After move finished OK: The following latched fault status register (0xa4) bits are set (value = 0x00000000)
17-02-28 20:30:55.194 -08 000000058 INF: Y Motor: After move finished OK: Clear latched fault status
17-02-28 20:30:55.194 -08 000000058 INF: Y Motor: Xmit s r0xa4 0xffff\r
17-02-28 20:30:55.256 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:30:55.256 -08 000000058 INF: Y Motor: Clear latched amplifier status: After move finished OK
17-02-28 20:30:55.256 -08 000000058 INF: Y Motor: Xmit s r0xa1 0xffffffff\r
17-02-28 20:30:55.320 -08 000000058 INF: Y Motor: Recv ok\r
17-02-28 20:30:55.320 -08 000000058 INF: ======================================
17-02-28 20:30:55.321 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:55.322 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, Scanning===================
17-02-28 20:30:55.323 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.323 -08 000000042 INF: FPGA: Xmit TDICLINES\n
17-02-28 20:30:55.380 -08 000000032 INF: FPGA: Recv TDICLINES 1023
17-02-28 20:30:55.380 -08 000000042 INF: FPGA: Xmit TDIYERD\n
17-02-28 20:30:55.442 -08 000000104 INF: FPGA: Recv TDIYERD 1492995
17-02-28 20:30:55.442 -08 000000042 INF: FPGA: Xmit ZADCR\n
17-02-28 20:30:55.504 -08 000000077 INF: FPGA: Recv ZADCR 22105
17-02-28 20:30:55.504 -08 000000042 INF: At scan end Y pos = 14.930 and Z pos = -0.085. Y moved -48.539 mm
17-02-28 20:30:55.504 -08 000000042 INF: FPGA: Xmit TDIPULSES\n
17-02-28 20:30:55.566 -08 000000045 INF: FPGA: Recv TDIPULSES 139265
17-02-28 20:30:55.566 -08 000000042 INF: The FPGA sent 139264 triggers to the camera ; expected 139264
17-02-28 20:30:55.566 -08 000000042 INF: TDIScan finished after 12747.9829 ms
17-02-28 20:30:55.566 -08 000000042 INF: Image[0]: Y should trigger at 63.469 mm, 2nd row was at 64.378 mm (error = 0.909 mm)
17-02-28 20:30:55.566 -08 000000042 INF: Image[2]: Y should trigger at 63.469 mm, 2nd row was at 64.378 mm (error = 0.909 mm)
17-02-28 20:30:55.568 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.603 -08 000000042 INF: Z jump check: There were 0/139264 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.464 um
17-02-28 20:30:55.603 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.604 -08 000000042 INF: FPGA: Xmit SWOOF_RDSTAT\n
17-02-28 20:30:55.628 -08 000000080 INF: FPGA: Recv SWOOF_RDSTAT 0
17-02-28 20:30:55.628 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.629 -08 000000104 INF: ===================Dither Clean Up Command===================
17-02-28 20:30:55.629 -08 000000089 INF: ===================Set YMotor gains for fast moves===================
17-02-28 20:30:55.629 -08 000000034 INF: ===================Set Y Motor Motor Velocity===================
17-02-28 20:30:55.629 -08 000000028 INF: ===================Set Z Motor Motor Velocity===================
17-02-28 20:30:55.630 -08 000000034 INF: Y Motor: Set max velocity (25000000), unit is 0.1 counts/sec
17-02-28 20:30:55.630 -08 000000034 INF: Y Motor: Xmit s r0xcb 25000000\r
17-02-28 20:30:55.630 -08 000000028 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format
17-02-28 20:30:55.630 -08 000000028 INF: FPGA: Xmit ZSTEP 1288471\n
17-02-28 20:30:55.630 -08 000000089 INF: ======================================
17-02-28 20:30:55.630 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:55.630 -08 000000052 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:55.631 -08 000000023 INF: FPGA: Xmit ZSEL 0\n
17-02-28 20:30:55.633 -08 000000052 INF: ===================LFT:Extracting coords===================
17-02-28 20:30:55.659 -08 000000052 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:55.659 -08 000000052 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand===================
17-02-28 20:30:55.660 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.660 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.661 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.661 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.661 -08 000000051 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:55.661 -08 000000078 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:55.661 -08 000000087 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:55.661 -08 000000069 INF: ===================Lookup Focus Tracking===================
17-02-28 20:30:55.691 -08 000000058 INF: FPGA: Recv ZSTEP 
17-02-28 20:30:55.691 -08 000000058 INF: FPGA: Recv ZSEL 
17-02-28 20:30:55.691 -08 000000023 INF: FPGA: Xmit ZDACW 26543\n
17-02-28 20:30:55.691 -08 000000028 INF: ======================================
17-02-28 20:30:55.692 -08 000000034 INF: Y Motor: Recv ok\r
17-02-28 20:30:55.692 -08 000000034 INF: ======================================
17-02-28 20:30:55.735 -08 000000051 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:55.735 -08 000000078 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:55.735 -08 000000087 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:55.735 -08 000000069 INF: FC:B, C:3,L:8, S:B - LFT will start at 3185 lines into the image buffer and analyze 10000 lines.
17-02-28 20:30:55.752 -08 000000032 INF: FPGA: Recv ZDACW 
17-02-28 20:30:55.752 -08 000000023 INF: ===================DitherPostSwathFocusCleanup, FPGA Bypass Data blocking===================
17-02-28 20:30:55.753 -08 000000023 INF: FPGA: Xmit TDIBB 0\n
17-02-28 20:30:55.818 -08 000000106 INF: FPGA: Recv TDIBB
17-02-28 20:30:55.818 -08 000000023 INF: ===================DitherPostSwathFocusCleanup===================
17-02-28 20:30:55.819 -08 000000023 INF: ======================================
17-02-28 20:30:55.886 -08 000000051 INF: LFT found best fwhm score 3.402823E+38 in 151 ms
17-02-28 20:30:55.886 -08 000000051 INF: LFT failed to find passing fwhm score. Highest score found is 3.402823E+38Best Z position will remain -0.0807786055223208 in the next cycle, cycle 4 FC:B, C:3,L:8,B
17-02-28 20:30:55.886 -08 000000078 INF: LFT found best fwhm score 2.000298 in 151 ms
17-02-28 20:30:55.886 -08 000000078 INF: LFT found good score at index 913 with fwhm value 2.000298. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:8,B
17-02-28 20:30:55.887 -08 000000051 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.887 -08 000000078 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.887 -08 000000069 INF: LFT found best fwhm score 2.000029 in 152 ms
17-02-28 20:30:55.887 -08 000000069 INF: LFT found good score at index 6465 with fwhm value 2.000029. Next cycle, cycle 4 starting Z position for bottom surface is at -0.080 mm FC:B, C:3,L:8,B
17-02-28 20:30:55.887 -08 000000051 INF: ======================================
17-02-28 20:30:55.887 -08 000000078 INF: ======================================
17-02-28 20:30:55.887 -08 000000069 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.887 -08 000000069 INF: ======================================
17-02-28 20:30:55.888 -08 000000087 INF: LFT found best fwhm score 2.000787 in 153 ms
17-02-28 20:30:55.888 -08 000000087 INF: LFT found good score at index 833 with fwhm value 2.000787. Next cycle, cycle 4 starting Z position for bottom surface is at -0.081 mm FC:B, C:3,L:8,B
17-02-28 20:30:55.889 -08 000000087 INF: ===================LookupFocusTracking===================
17-02-28 20:30:55.889 -08 000000087 INF: ======================================
17-02-28 20:30:55.890 -08 000000052 INF: ===================LookupFocusTrackingCleanup===================
17-02-28 20:30:55.891 -08 000000052 INF: LFT weighted average best Z for bottom surface is at -0.081mm FC:B, C:3,L:8,B
17-02-28 20:30:55.891 -08 000000052 INF: ======================================
17-02-28 20:30:55.893 -08 000000104 INF: ======================================
17-02-28 20:30:55.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.894 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(A)===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(G)===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(T)===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C, HandleImage(C)===================
17-02-28 20:30:55.895 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Channels A, G, T, C===================
17-02-28 20:30:55.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:30:55.896 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:30:55.897 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module..., Waiting for image analysis===================
17-02-28 20:30:55.897 -08 000000042 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module...===================
17-02-28 20:30:55.897 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827, Waiting for image analysis===================
17-02-28 20:30:55.897 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8, Swath 2 - X = 89.09118 Y = 39.78827===================
17-02-28 20:30:55.920 -08 000000042 INF: Waited 23 ms to submit image to image processing queue.  Lock wait time: 0, thread wait time 0, buffer wait time 0
17-02-28 20:30:55.920 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:55.920 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:55.920 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:55.921 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing, MemoryMappedTransfer===================
17-02-28 20:30:55.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface, Lane 8===================
17-02-28 20:30:55.921 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging, Bottom Surface===================
17-02-28 20:30:55.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:30:55.922 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:30:55.922 -08 000000042 INF: EjectButton: EjectButton LED On
17-02-28 20:30:55.922 -08 000000042 INF: FPGA: Xmit LEDMODEPB 1\n
17-02-28 20:30:55.990 -08 000000095 INF: FPGA: Recv LEDMODEPB
17-02-28 20:30:55.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:30:55.991 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.991 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:30:55.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for analysis...===================
17-02-28 20:30:55.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.992 -08 000000042 INF: LaserShutterArbiter: Request to Close; lock count was 0, will be 1
17-02-28 20:30:55.992 -08 000000042 INF: LaserShutter: Closing laser shutter
17-02-28 20:30:55.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for user to shut the door...===================
17-02-28 20:30:55.992 -08 000000042 INF: FPGA: Xmit SWLSRSHUT 0\n
17-02-28 20:30:55.992 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module to allow resumeChemistry...===================
17-02-28 20:30:55.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.993 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for imaging module...===================
17-02-28 20:30:55.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for analysis...===================
17-02-28 20:30:55.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Waiting for user to shut the door...===================
17-02-28 20:30:55.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.994 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:55.994 -08 000000018 INF: EjectButton: EjectButton LED Off
17-02-28 20:30:55.995 -08 000000018 INF: FPGA: Xmit LEDMODEPB 0\n
17-02-28 20:30:56.002 -08 000000098 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2205 Request: {"Cycle":3,"Lane":8,"Tile":2205,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF180","HCSMMF247","HCSMMF244","HCSMMF188"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.127 -08 000000087 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:30:56.128 -08 000000087 INF: FPGA: Recv LEDMODEPB
17-02-28 20:30:56.130 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:56.132 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:56.133 -08 000000058 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2203 Request: {"Cycle":3,"Lane":8,"Tile":2203,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF285","HCSMMF253","HCSMMF242","HCSMMF214"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.172 -08 000000056 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2204 Request: {"Cycle":3,"Lane":8,"Tile":2204,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF224","HCSMMF199","HCSMMF198","HCSMMF218"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.177 -08 000000079 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2210 Request: {"Cycle":3,"Lane":8,"Tile":2210,"Channels":["A","G","C","T"],"MemoryMappedFileNames":["HCSMMF276","HCSMMF221","HCSMMF279","HCSMMF187"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.180 -08 000000091 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2207 Request: {"Cycle":3,"Lane":8,"Tile":2207,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF192","HCSMMF229","HCSMMF264","HCSMMF260"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.184 -08 000000072 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2211 Request: {"Cycle":3,"Lane":8,"Tile":2211,"Channels":["C","A","G","T"],"MemoryMappedFileNames":["HCSMMF197","HCSMMF275","HCSMMF239","HCSMMF207"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.187 -08 000000049 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2201 Request: {"Cycle":3,"Lane":8,"Tile":2201,"Channels":["G","T","A","C"],"MemoryMappedFileNames":["HCSMMF226","HCSMMF216","HCSMMF243","HCSMMF211"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.188 -08 000000054 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2213 Request: {"Cycle":3,"Lane":8,"Tile":2213,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF215","HCSMMF248","HCSMMF280","HCSMMF257"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.189 -08 000000082 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2216 Request: {"Cycle":3,"Lane":8,"Tile":2216,"Channels":["T","C","G","A"],"MemoryMappedFileNames":["HCSMMF270","HCSMMF225","HCSMMF265","HCSMMF189"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.190 -08 000000034 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2209 Request: {"Cycle":3,"Lane":8,"Tile":2209,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF183","HCSMMF278","HCSMMF227","HCSMMF250"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.191 -08 000000078 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2218 Request: {"Cycle":3,"Lane":8,"Tile":2218,"Channels":["T","A","G","C"],"MemoryMappedFileNames":["HCSMMF234","HCSMMF219","HCSMMF186","HCSMMF286"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.192 -08 000000071 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2206 Request: {"Cycle":3,"Lane":8,"Tile":2206,"Channels":["T","G","C","A"],"MemoryMappedFileNames":["HCSMMF208","HCSMMF282","HCSMMF269","HCSMMF274"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.193 -08 000000023 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2208 Request: {"Cycle":3,"Lane":8,"Tile":2208,"Channels":["G","A","T","C"],"MemoryMappedFileNames":["HCSMMF267","HCSMMF191","HCSMMF258","HCSMMF237"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.194 -08 000000045 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2202 Request: {"Cycle":3,"Lane":8,"Tile":2202,"Channels":["C","A","T","G"],"MemoryMappedFileNames":["HCSMMF194","HCSMMF277","HCSMMF184","HCSMMF259"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.195 -08 000000104 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2224 Request: {"Cycle":3,"Lane":8,"Tile":2224,"Channels":["G","C","A","T"],"MemoryMappedFileNames":["HCSMMF266","HCSMMF251","HCSMMF281","HCSMMF204"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.196 -08 000000064 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2222 Request: {"Cycle":3,"Lane":8,"Tile":2222,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF205","HCSMMF245","HCSMMF240","HCSMMF252"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.197 -08 000000095 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2223 Request: {"Cycle":3,"Lane":8,"Tile":2223,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF249","HCSMMF272","HCSMMF256","HCSMMF190"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.198 -08 000000033 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2226 Request: {"Cycle":3,"Lane":8,"Tile":2226,"Channels":["A","T","G","C"],"MemoryMappedFileNames":["HCSMMF196","HCSMMF283","HCSMMF268","HCSMMF263"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.199 -08 000000038 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2215 Request: {"Cycle":3,"Lane":8,"Tile":2215,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF231","HCSMMF246","HCSMMF233","HCSMMF287"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.200 -08 000000044 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2217 Request: {"Cycle":3,"Lane":8,"Tile":2217,"Channels":["C","T","A","G"],"MemoryMappedFileNames":["HCSMMF176","HCSMMF178","HCSMMF262","HCSMMF182"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.201 -08 000000028 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2221 Request: {"Cycle":3,"Lane":8,"Tile":2221,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF230","HCSMMF238","HCSMMF213","HCSMMF201"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.201 -08 000000073 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2219 Request: {"Cycle":3,"Lane":8,"Tile":2219,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF271","HCSMMF232","HCSMMF212","HCSMMF255"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.202 -08 000000035 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2214 Request: {"Cycle":3,"Lane":8,"Tile":2214,"Channels":["A","C","T","G"],"MemoryMappedFileNames":["HCSMMF185","HCSMMF181","HCSMMF202","HCSMMF236"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.203 -08 000000060 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2212 Request: {"Cycle":3,"Lane":8,"Tile":2212,"Channels":["G","T","C","A"],"MemoryMappedFileNames":["HCSMMF217","HCSMMF228","HCSMMF179","HCSMMF220"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.205 -08 000000055 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2227 Request: {"Cycle":3,"Lane":8,"Tile":2227,"Channels":["A","G","T","C"],"MemoryMappedFileNames":["HCSMMF195","HCSMMF209","HCSMMF223","HCSMMF254"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.206 -08 000000030 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2220 Request: {"Cycle":3,"Lane":8,"Tile":2220,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF200","HCSMMF206","HCSMMF284","HCSMMF177"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.207 -08 000000052 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2225 Request: {"Cycle":3,"Lane":8,"Tile":2225,"Channels":["A","T","C","G"],"MemoryMappedFileNames":["HCSMMF222","HCSMMF210","HCSMMF241","HCSMMF235"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.209 -08 000000102 INF: Notifying RTA to Process Multi MMF for Lane: 8 Cycle: 3 Tile: 2228 Request: {"Cycle":3,"Lane":8,"Tile":2228,"Channels":["T","A","C","G"],"MemoryMappedFileNames":["HCSMMF261","HCSMMF193","HCSMMF203","HCSMMF273"],"Size":30770576,"Width":3188,"Height":4826} 
17-02-28 20:30:56.212 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:56.218 -08 000000049 INF: ===================Saving Thumbnail Image Channel A===================
17-02-28 20:30:56.228 -08 000000018 INF: LaserShutterArbiter: Request to Open; lock count was 1, will be 0
17-02-28 20:30:56.228 -08 000000018 INF: LaserShutter: Opening laser shutter
17-02-28 20:30:56.228 -08 000000018 INF: FPGA: Xmit SWLSRSHUT 1\n
17-02-28 20:30:56.228 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:30:56.228 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3, Imaging===================
17-02-28 20:30:56.241 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX), Cycle #3===================
17-02-28 20:30:56.242 -08 000000042 INF: ===================Flow Cell B (HHGTLBBXX)===================
17-02-28 20:30:56.252 -08 000000099 INF: FPGA: Recv SWLSRSHUT
17-02-28 20:30:56.309 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:56.309 -08 000000049 INF: ===================Saving Zprofile for Image Channel A===================
17-02-28 20:30:56.351 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:56.353 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging===================
17-02-28 20:30:56.357 -08 000000049 INF: ===================Saving Thumbnail Image Channel T===================
17-02-28 20:30:56.359 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface===================
17-02-28 20:30:56.359 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface===================
17-02-28 20:30:56.359 -08 000000018 INF: Compensator: Moving IntoPath
17-02-28 20:30:56.359 -08 000000018 INF: FPGA: Xmit MIOCOMPF\n
17-02-28 20:30:56.445 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:56.450 -08 000000049 INF: ===================Saving Thumbnail Image Channel C===================
17-02-28 20:30:56.547 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:56.553 -08 000000049 INF: ===================Saving Thumbnail Image Channel G===================
17-02-28 20:30:56.645 -08 000000049 INF: ===================Image Analysis Flow Cell B 01, MMFProcessing===================
17-02-28 20:30:56.753 -08 000000099 INF: FPGA: Recv MIOCOMPF
17-02-28 20:30:56.753 -08 000000018 INF: Compensator: Moved IntoPath in 393 ms
17-02-28 20:30:56.753 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface===================
17-02-28 20:30:56.754 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface===================
17-02-28 20:30:56.754 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface, Aligning===================
17-02-28 20:30:56.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface, Aligning===================
17-02-28 20:30:56.755 -08 000000018 INF: ===================Flow Cell A (HHHWNBBXX), Cycle #4, Imaging, Top Surface, Aligning===================
17-02-28 20:30:56.756 -08 000000106 INF: ===================Move Tilt Motor 2===================
17-02-28 20:30:56.756 -08 000000087 INF: ===================Move Tilt Motor 1===================
17-02-28 20:30:56.756 -08 000000106 INF: Tilt Motor 2: Moving to 5.2428 mm, started at 5.4531 mm, delta = -0.2103 mm
17-02-28 20:30:56.756 -08 000000106 INF: FPGA: Xmit T2RD\n
17-02-28 20:30:56.756 -08 000000056 INF: ===================Move Tilt Motor 3===================
17-02-28 20:30:56.756 -08 000000087 INF: Tilt Motor 1: Moving to 5.1796 mm, started at 4.9792 mm, delta = 0.2004 mm
17-02-28 20:30:56.756 -08 000000056 INF: Tilt Motor 3: Moving to 5.2695 mm, started at 5.3985 mm, delta = -0.1290 mm
17-02-28 20:30:56.759 -08 000000087 INF: FPGA: Xmit T1RD\n
17-02-28 20:30:56.760 -08 000000056 INF: FPGA: Xmit T3RD\n
17-02-28 20:30:56.816 -08 000000080 INF: FPGA: Recv T2RD 21469
17-02-28 20:30:56.816 -08 000000080 INF: FPGA: Recv T1RD 19602
17-02-28 20:30:56.816 -08 000000080 INF: FPGA: Recv T3RD 21254
17-02-28 20:30:56.816 -08 000000056 INF: Tilt Motor 3: Encoder: at motor step 3542 + 2/6
17-02-28 20:30:56.816 -08 000000106 INF: Tilt Motor 2: Encoder: at motor step 3578 + 1/6
17-02-28 20:30:56.816 -08 000000106 INF: Tilt Motor 2: Moving to 20641 encoder counts
17-02-28 20:30:56.816 -08 000000106 INF: FPGA: Xmit T2MOVETO 20641\n
17-02-28 20:30:56.816 -08 000000056 INF: Tilt Motor 3: Moving to 20746 encoder counts
17-02-28 20:30:56.817 -08 000000056 INF: FPGA: Xmit T3MOVETO 20746\n
17-02-28 20:30:56.817 -08 000000087 INF: Tilt Motor 1: Encoder: at motor step 3267 + 0/6
17-02-28 20:30:56.817 -08 000000087 INF: Tilt Motor 1: Moving to 20392 encoder counts
17-02-28 20:30:56.818 -08 000000087 INF: FPGA: Xmit T1MOVETO 20392\n