17-03-18 02:59:51.824 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 02:59:51.824 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 02:59:51.824 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 02:59:51.824 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:59:51.834 -07 000000502 INF: FPGA: Recv YRDPOS 153256
17-03-18 02:59:51.834 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 02:59:51.834 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:59:51.834 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 02:59:51.834 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 02:59:51.834 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 02:59:51.944 -07 000000467 INF: FPGA: Recv YMVTO 154378 877
17-03-18 02:59:51.944 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 108 ms to get response, and 117 ms overall
17-03-18 02:59:51.944 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm)
17-03-18 02:59:51.944 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 877 steps (0.548 mm). Slippage = 0.000 mm (0.00%).
17-03-18 02:59:51.944 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 117 ms, distance = 0.549 mm, average velocity = 4.688 mm/sec
17-03-18 02:59:53.604 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.012614,
17-03-18 02:59:54.944 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:59:54.944 -07 000000462 INF: FPGA: Recv YRDPOS 154386
17-03-18 02:59:54.954 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:59:54.954 -07 000000610 INF: Y Motor: Encoder = 154386 = motor step 120614.1 = 75.3838 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:59:54.984 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003209, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:59:54.984 -07 000000610 INF: Y Motor: Position error after settling = 7 encoder counts (0.003 mm), Delta during settling = 8 counts (0.004 mm)
17-03-18 02:59:54.984 -07 000000610 INF: Y Motor: Moved to 75.3838 after 3157 ms
17-03-18 02:59:54.994 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 60° ===================
17-03-18 02:59:54.994 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 02:59:54.994 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 02:59:54.994 -07 000000618 INF: FPGA: Recv TEC2TEMP 
17-03-18 02:59:55.004 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:59:55.004 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 02:59:55.004 -07 000000579 INF: FPGA: Recv TEC2EN 
17-03-18 02:59:55.014 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:59:55.014 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 60° ===================
17-03-18 02:59:55.014 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 02:59:55.014 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 02:59:55.014 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:59:55.044 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 02:59:55.044 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 02:59:55.044 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 02:59:55.344 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:59:55.364 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 02:59:55.364 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 02:59:55.414 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:59:55.434 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:59:55.434 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:59:55.534 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 02:59:55.534 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 02:59:55.534 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:59:55.564 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 02:59:55.564 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 02:59:55.564 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:59:55.694 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 02:59:55.734 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:59:56.534 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:59:56.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1570, R2=1634, Total=3204. Warn if over 250 bubbles per interval.
17-03-18 02:59:58.864 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:59:58.894 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:59:58.964 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.988112,
17-03-18 02:59:59.314 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:59:59.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:59:59.764 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:59:59.794 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:59:59.794 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 02:59:59.794 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 02:59:59.924 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:59:59.954 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:59:59.954 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:00:00.084 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:00.114 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:00:00.114 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:00:00.114 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:00:00.244 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:00:00.274 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:00.704 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:00.734 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:00.734 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:00:00.734 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:01.534 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:00:01.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1571, R2=1635, Total=3206. Warn if over 250 bubbles per interval.
17-03-18 03:00:01.954 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:00:01.954 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:00:01.954 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:01.974 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:00:01.974 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:00:01.974 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:00:02.104 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:00:02.124 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:00:02.124 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:00:02.174 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:02.194 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:00:02.194 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:00:02.294 -07 000000610 INF: =================== Cycle #107, Pumping Reagent CMS (4) ===================
17-03-18 03:00:02.294 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:00:02.294 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:02.324 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:00:02.324 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:00:02.324 -07 000000610 INF: =================== Cycle #107, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:00:02.454 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:00:02.494 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:03.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:03.964 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:04.324 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.988112,
17-03-18 03:00:04.384 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:04.414 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:04.414 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:00:04.414 -07 000000610 INF: =================== Cycle #107, Pumping Reagent CMS (4) ===================
17-03-18 03:00:04.544 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:04.574 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:00:04.574 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:00:04.704 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:04.734 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:00:04.734 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:00:04.734 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:00:04.864 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:00:04.894 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:05.324 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:05.354 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:05.354 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:00:05.354 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:06.534 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:06.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1571, R2=1635, Total=3206. Warn if over 250 bubbles per interval.
17-03-18 03:00:06.574 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:00:06.574 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:00:06.574 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:06.594 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:00:06.594 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:00:06.594 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:00:06.744 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:00:06.764 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:00:06.764 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:00:06.814 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:06.834 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:00:06.834 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:00:06.934 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:00:06.934 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:00:06.934 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:06.964 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:00:06.964 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:00:06.964 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:00:07.094 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:00:07.134 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:08.004 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:08.034 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:08.034 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:00:08.034 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:00:08.164 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:08.194 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:00:08.194 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:00:08.324 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:08.354 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:00:08.354 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:00:08.354 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:00:08.484 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:00:08.514 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:08.944 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:08.974 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:08.974 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:00:08.974 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:08.974 -07 000000512 INF: WaitCommand(10000) start
17-03-18 03:00:08.974 -07 000000467 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:00:08.974 -07 000000467 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:00:09.684 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.996267,
17-03-18 03:00:10.194 -07 000000467 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:00:10.194 -07 000000467 INF: LanePump: Xmit /1?\r
17-03-18 03:00:10.224 -07 000000467 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:00:10.224 -07 000000467 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:00:10.354 -07 000000467 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:00:10.394 -07 000000467 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:11.534 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:11.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1571, R2=1635, Total=3206. Warn if over 250 bubbles per interval.
17-03-18 03:00:11.924 -07 000000467 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:11.954 -07 000000467 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:12.374 -07 000000467 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:12.404 -07 000000467 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:12.404 -07 000000467 INF: LanePump: Waited 2010 ms for pump motion to complete
17-03-18 03:00:12.404 -07 000000467 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:00:12.404 -07 000000467 INF: ===================  ===================
17-03-18 03:00:15.044 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.983999,
17-03-18 03:00:16.534 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:16.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1571, R2=1635, Total=3206. Warn if over 250 bubbles per interval.
17-03-18 03:00:18.984 -07 000000512 INF: WaitCommand(10000) end
17-03-18 03:00:18.984 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:00:18.984 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:00:18.984 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:19.014 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:00:19.014 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:00:19.014 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:00:19.144 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:00:19.184 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:20.404 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.003063,
17-03-18 03:00:21.534 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:00:21.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1572, R2=1636, Total=3208. Warn if over 250 bubbles per interval.
17-03-18 03:00:25.314 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:25.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:25.764 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:25.764 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.975845,
17-03-18 03:00:25.794 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:26.214 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:26.244 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:26.534 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:00:26.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1636, Total=3209. Warn if over 250 bubbles per interval.
17-03-18 03:00:26.664 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:26.694 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:27.114 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:27.144 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:27.144 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:00:27.144 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:00:27.274 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:27.304 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:00:27.304 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:00:27.434 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:27.464 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:00:27.464 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:00:27.464 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:00:27.594 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:00:27.624 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:28.054 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:28.084 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:28.084 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:00:28.084 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:29.304 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 03:00:29.304 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:00:29.304 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:29.324 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:00:29.324 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:00:29.324 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:00:29.534 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:00:29.554 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:00:29.554 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:00:29.604 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:29.624 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:00:29.624 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:00:29.724 -07 000000610 INF: =================== Cycle #107, Pumping Reagent IMT (1) ===================
17-03-18 03:00:29.724 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:00:29.724 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:29.754 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:00:29.754 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:00:29.754 -07 000000610 INF: =================== Cycle #107, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:00:29.884 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:00:29.924 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:31.124 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.979922,
17-03-18 03:00:31.364 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:31.394 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:31.534 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:00:31.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:00:31.814 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:31.844 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:31.844 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:00:31.844 -07 000000610 INF: =================== Cycle #107, Pumping Reagent IMT (1) ===================
17-03-18 03:00:31.974 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:32.004 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:00:32.004 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:00:32.134 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:32.164 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:00:32.164 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:00:32.164 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:00:32.294 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:00:32.324 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:32.754 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:32.784 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:32.784 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:00:32.784 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:34.004 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:00:34.004 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:00:34.004 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:34.024 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:00:34.024 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:00:34.024 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:00:34.254 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:00:34.274 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:00:34.274 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:00:34.324 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:00:34.344 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:00:34.344 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:00:34.444 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:00:34.444 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:00:34.444 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:34.474 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:00:34.474 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:00:34.474 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:00:34.604 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:00:34.644 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:00:35.514 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:35.544 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:35.544 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:00:35.544 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:00:35.674 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:35.704 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:00:35.704 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:00:35.834 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:00:35.864 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:00:35.864 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:00:35.864 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:00:35.994 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:00:36.024 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:36.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:00:36.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:00:36.484 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:00:36.484 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:36.484 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.994908,
17-03-18 03:00:36.484 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 65° ===================
17-03-18 03:00:36.484 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:00:36.504 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 03:00:36.504 -07 000000444 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:00:36.514 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:00:36.534 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:00:36.534 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:36.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:00:36.534 -07 000000462 INF: FPGA: Recv TEC2EN 
17-03-18 03:00:36.544 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:00:36.544 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 65° ===================
17-03-18 03:00:36.544 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:00:36.544 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:00:41.534 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:41.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:00:41.854 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.996267,
17-03-18 03:00:46.534 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:46.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:00:47.214 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.996267,
17-03-18 03:00:51.534 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:51.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:00:52.574 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.001704,
17-03-18 03:00:56.534 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:00:56.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:00:57.934 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.990831,
17-03-18 03:01:01.534 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:01.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:03.294 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.001704,
17-03-18 03:01:06.534 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:06.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:06.554 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:01:06.554 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:01:06.554 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:01:06.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:06.644 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:01:06.644 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:01:06.644 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:01:06.774 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:01:06.814 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:07.354 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:07.384 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:07.384 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 03:01:07.384 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:01:07.514 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:07.544 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:01:07.544 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:01:07.674 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:07.704 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:01:07.704 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:01:07.704 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:01:07.834 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:01:07.864 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:08.294 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:08.324 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:08.324 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:01:08.324 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:01:08.324 -07 000000606 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:01:08.324 -07 000000606 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:01:08.324 -07 000000430 INF: WaitCommand(30000) start
17-03-18 03:01:08.654 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.96762,
17-03-18 03:01:09.544 -07 000000606 INF: AsyncDelayTimer waited 1213ms
17-03-18 03:01:09.544 -07 000000606 INF: LanePump: Xmit /1?\r
17-03-18 03:01:09.574 -07 000000606 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:01:09.574 -07 000000606 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:01:09.704 -07 000000606 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:01:09.744 -07 000000606 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:11.534 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:11.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:12.084 -07 000000606 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:12.114 -07 000000606 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:12.534 -07 000000606 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:12.564 -07 000000606 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:12.564 -07 000000606 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 03:01:12.564 -07 000000606 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:01:12.564 -07 000000606 INF: ===================  ===================
17-03-18 03:01:14.014 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.975845,
17-03-18 03:01:16.534 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:16.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:19.374 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.989471,
17-03-18 03:01:21.534 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:21.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:24.734 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.996267,
17-03-18 03:01:26.534 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:26.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:30.094 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.997626,
17-03-18 03:01:31.534 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:31.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:35.454 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.015368,
17-03-18 03:01:36.534 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:36.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1573, R2=1637, Total=3210. Warn if over 250 bubbles per interval.
17-03-18 03:01:38.334 -07 000000430 INF: WaitCommand(30000) end
17-03-18 03:01:38.334 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 22° ===================
17-03-18 03:01:38.334 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:01:38.334 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:01:38.344 -07 000000590 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:01:38.344 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:01:38.344 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:01:38.344 -07 000000502 INF: FPGA: Recv TEC2EN 
17-03-18 03:01:38.354 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:01:38.354 -07 000000610 INF: =================== Cycle #107, Flow Cell Temp 22° ===================
17-03-18 03:01:38.354 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:01:38.354 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:01:38.354 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:01:38.354 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:38.394 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:01:38.394 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:01:38.394 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:01:38.524 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:01:38.564 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:40.814 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.996267,
17-03-18 03:01:41.534 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-18 03:01:41.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1575, R2=1639, Total=3214. Warn if over 250 bubbles per interval.
17-03-18 03:01:41.694 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:41.724 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:42.144 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:42.174 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:42.594 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:42.624 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:42.624 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:01:42.624 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:01:42.754 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:42.784 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:01:42.784 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:01:42.914 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:42.944 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:01:42.944 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:01:42.944 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:01:43.074 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:01:43.104 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:43.534 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:43.564 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:43.564 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:01:43.564 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:01:44.784 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:01:44.784 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:01:44.784 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:01:44.804 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:01:44.804 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:01:44.804 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:01:44.954 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:01:44.974 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:01:44.974 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:01:45.024 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:01:45.044 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:01:45.044 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:01:45.144 -07 000000610 INF: =================== Cycle #107, Pumping Reagent USM (2) ===================
17-03-18 03:01:45.144 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:01:45.144 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:45.174 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:01:45.174 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:01:45.174 -07 000000610 INF: =================== Cycle #107, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:01:45.304 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:01:45.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:46.174 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.970374,
17-03-18 03:01:46.534 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 3
17-03-18 03:01:46.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=3, R2=3, Total=6. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1642, Total=3220. Warn if over 250 bubbles per interval.
17-03-18 03:01:46.784 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:46.814 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:47.234 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:47.264 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:47.264 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:01:47.264 -07 000000610 INF: =================== Cycle #107, Pumping Reagent USM (2) ===================
17-03-18 03:01:47.394 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:47.424 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:01:47.424 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:01:47.554 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:47.584 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:01:47.584 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:01:47.584 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:01:47.714 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:01:47.744 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:48.174 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:48.204 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:48.204 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:01:48.204 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:01:49.424 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:01:49.424 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:01:49.424 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:01:49.444 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:01:49.444 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:01:49.444 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:01:49.594 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:01:49.614 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:01:49.614 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:01:49.664 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:01:49.684 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:01:49.684 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:01:49.784 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:01:49.784 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:01:49.784 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:49.814 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:01:49.814 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:01:49.814 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:01:49.944 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:01:49.984 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:50.854 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:50.884 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:50.884 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:01:50.884 -07 000000610 INF: =================== Cycle #107, Pumping Reagent PR2 (3) ===================
17-03-18 03:01:51.014 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:51.044 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:01:51.044 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:01:51.174 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:01:51.204 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:01:51.204 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:01:51.204 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:01:51.334 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:01:51.364 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:51.534 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.997626,
17-03-18 03:01:51.534 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:51.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1642, Total=3220. Warn if over 250 bubbles per interval.
17-03-18 03:01:51.794 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:51.824 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:51.824 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:01:51.824 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:01:51.824 -07 000000579 INF: WaitCommand(10000) start
17-03-18 03:01:51.824 -07 000000590 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:01:51.824 -07 000000590 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:01:53.044 -07 000000590 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:01:53.044 -07 000000590 INF: LanePump: Xmit /1?\r
17-03-18 03:01:53.074 -07 000000590 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:01:53.074 -07 000000590 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:01:53.204 -07 000000590 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:01:53.244 -07 000000590 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:54.774 -07 000000590 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:54.804 -07 000000590 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:01:55.224 -07 000000590 INF: LanePump: Xmit /1Q\r
17-03-18 03:01:55.254 -07 000000590 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:01:55.254 -07 000000590 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:01:55.254 -07 000000590 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:01:55.254 -07 000000590 INF: ===================  ===================
17-03-18 03:01:56.534 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:01:56.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1642, Total=3220. Warn if over 250 bubbles per interval.
17-03-18 03:01:56.894 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.985358,
17-03-18 03:02:01.534 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:02:01.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:01.834 -07 000000579 INF: WaitCommand(10000) end
17-03-18 03:02:01.834 -07 000000610 INF: =================== Cycle #107, Imaging ===================
17-03-18 03:02:01.834 -07 000000610 INF: Imaging Cycle 107: ScanTilesCommand Cycle 107 time start.
17-03-18 03:02:01.844 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:02:01.844 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:02:01.864 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:02:01.864 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:02:01.864 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:02:02.164 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:02:02.184 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:02:02.184 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:02:02.234 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:02:02.254 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:02:02.254 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.997626,
17-03-18 03:02:02.254 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:02.254 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:02.254 -07 000000626 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:02:02.254 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:02.274 -07 000000626 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:02:02.274 -07 000000444 INF: FPGA: Recv EXLED1ON 
17-03-18 03:02:02.284 -07 000000626 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:02:02.304 -07 000000626 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:02:02.304 -07 000000455 INF: FPGA: Recv EXLED1ADCR 22874
17-03-18 03:02:02.314 -07 000000626 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:02:02.314 -07 000000626 INF: RedLED: Using Red data: Photodiode ADC 22874 --> 7.3 mW (old method), or 202.9 mW (new method). Difference = 195.5 mW
17-03-18 03:02:02.314 -07 000000626 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:02:02.314 -07 000000430 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:02:02.324 -07 000000626 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:02.324 -07 000000626 INF: RedLED: LED was on for 39 ms
17-03-18 03:02:02.324 -07 000000626 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 65 ms.
17-03-18 03:02:02.324 -07 000000626 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:02:02.324 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:02.324 -07 000000626 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:02:02.324 -07 000000512 INF: FPGA: Recv EXLED2ON 
17-03-18 03:02:02.334 -07 000000626 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:02:02.334 -07 000000626 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:02:02.334 -07 000000455 INF: FPGA: Recv EXLED1ADCR 2101
17-03-18 03:02:02.344 -07 000000626 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:02.344 -07 000000626 INF: GreenLED: Using Green data: Photodiode ADC 2101 --> 0.9 mW (old method), or 182.5 mW (new method). Difference = 181.6 mW
17-03-18 03:02:02.344 -07 000000626 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:02:02.344 -07 000000569 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:02:02.354 -07 000000626 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:02.354 -07 000000626 INF: GreenLED: LED was on for 18 ms
17-03-18 03:02:02.354 -07 000000626 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 27 ms.
17-03-18 03:02:02.354 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:02:02.354 -07 000000444 INF: FPGA: Recv EMCUR 
17-03-18 03:02:02.364 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:02.364 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:02:02.864 -07 000000430 INF: FPGA: Recv EMOUT
17-03-18 03:02:02.864 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:02:02.864 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:02:02.864 -07 000000501 INF: FPGA: Recv EMCUR 
17-03-18 03:02:02.874 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:02.874 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:02:02.874 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.3837890625, Z-Position -0.12654198936436. ------
17-03-18 03:02:02.874 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:02.874 -07 000000576 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17849 mm
17-03-18 03:02:02.874 -07 000000576 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:02.884 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 38992, sync = True, waitForSettling = False)
17-03-18 03:02:02.884 -07 000000561 INF: Z Motor: Moving to -0.178494 mm, started at -0.126542 mm, distance = -51.95 um
17-03-18 03:02:02.884 -07 000000561 INF: FPGA: Xmit ZDACW 38992\n [Z Motor]
17-03-18 03:02:02.884 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:02:02.884 -07 000000606 INF: Y Motor: Moving to 59.9126 mm, started at 75.3838 mm, delta = -15.4712 mm
17-03-18 03:02:02.884 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:02.884 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-18 03:02:02.884 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:02:02.894 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:02.894 -07 000000561 INF: FPGA: 'ZDACW 38992' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:02.894 -07 000000430 INF: FPGA: Recv YRDPOS 154386
17-03-18 03:02:02.904 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:02:02.904 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:02.904 -07 000000606 INF: Y Motor: Encoder = 154386 = motor step 120614.1 = 75.3838 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:02.904 -07 000000606 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:02:02.904 -07 000000606 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:02:02.914 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:02.914 -07 000000590 INF: FPGA: Recv ZDACR 38992
17-03-18 03:02:02.924 -07 000000606 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:02:02.924 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:02:02.924 -07 000000561 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 03:02:03.104 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:02:03.104 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 219 ms overall
17-03-18 03:02:04.604 -07 000000444 INF: FPGA: Recv YMVTO 122703 24781
17-03-18 03:02:04.604 -07 000000606 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1705 ms overall
17-03-18 03:02:04.604 -07 000000606 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:02:04.604 -07 000000606 INF: Y Motor: To move from 75.384 to 59.913 (-15.471 mm) should take 24754 steps, but required 24781 steps (15.488 mm). Slippage = 0.017 mm (0.00%).
17-03-18 03:02:04.604 -07 000000606 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1705 ms, distance = 15.471 mm, average velocity = 9.074 mm/sec
17-03-18 03:02:06.534 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:06.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:07.454 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:07.454 -07 000000455 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:02:07.464 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.464 -07 000000606 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:07.494 -07 000000606 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:07.494 -07 000000606 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:02:07.494 -07 000000606 INF: Y Motor: Moved to 59.9106 after 4612 ms
17-03-18 03:02:07.494 -07 000000576 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178494 mm (DAC = 38992)
17-03-18 03:02:07.494 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.504 -07 000000501 INF: FPGA: Recv ZSGSRD 37075
17-03-18 03:02:07.504 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:02:07.504 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.504 -07 000000590 INF: FPGA: Recv ZSGSRD 37078
17-03-18 03:02:07.514 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.514 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.514 -07 000000569 INF: FPGA: Recv ZSGSRD 37073
17-03-18 03:02:07.524 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.524 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.524 -07 000000430 INF: FPGA: Recv ZSGSRD 37071
17-03-18 03:02:07.534 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.534 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.534 -07 000000629 INF: FPGA: Recv ZSGSRD 37077
17-03-18 03:02:07.544 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.544 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.544 -07 000000430 INF: FPGA: Recv ZSGSRD 37075
17-03-18 03:02:07.554 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.554 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.554 -07 000000444 INF: FPGA: Recv ZSGSRD 37079
17-03-18 03:02:07.564 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.564 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.564 -07 000000467 INF: FPGA: Recv ZSGSRD 37075
17-03-18 03:02:07.574 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.574 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.574 -07 000000455 INF: FPGA: Recv ZSGSRD 37072
17-03-18 03:02:07.584 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.584 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:07.584 -07 000000626 INF: FPGA: Recv ZSGSRD 37074
17-03-18 03:02:07.594 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.594 -07 000000576 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:07.594 -07 000000606 INF: FPGA: Recv ZPIEZORD 33339
17-03-18 03:02:07.604 -07 000000576 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:07.604 -07 000000576 INF: Z Motor: Piezo is near 51.2 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.950 V. Piezo Error = -8.3 V.
17-03-18 03:02:07.604 -07 000000576 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.5 um, Read 10 ADC samples: Avg = 37075 (-177.6 uncal um), Error = 0.9 uncal um, Median = 37075 (-177.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 37071 (-177.6 uncal um), Max = 37079 (-177.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:02:07.604 -07 000000576 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37075, posNoise = 4, negNoise = 4
17-03-18 03:02:07.604 -07 000000576 INF: Z Motor: After move to -0.178494, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:07.604 -07 000000576 INF: Z Motor: Settle wait time = 4616 ms, measure time = 104 ms (allowed 150 ms), total time = 4720 ms
17-03-18 03:02:07.604 -07 000000576 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:07.624 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.983999,
17-03-18 03:02:07.654 -07 000000576 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4773 ms
17-03-18 03:02:07.654 -07 000000576 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:07.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:07.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:07.654 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:07.654 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:07.654 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:02:07.654 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:07.664 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:07.664 -07 000000579 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:02:07.684 -07 000000579 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 20 ms.
17-03-18 03:02:07.684 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:02:07.684 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:07.684 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:02:07.694 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:02:07.694 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 31 ms.
17-03-18 03:02:07.694 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:02:07.734 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:02:08.034 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:02:08.034 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:02:08.034 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:02:08.044 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 609218240, 0x0, 559484976) start.
17-03-18 03:02:08.074 -07 000000561 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:02:08.074 -07 000000430 INF: FPGA: Recv CAMSNAP
17-03-18 03:02:08.074 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 03:02:08.154 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 609218240, 0x0, 559484976) end. Duration was 113 ms.
17-03-18 03:02:08.154 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:08.154 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:02:08.154 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 116 ms.
17-03-18 03:02:08.174 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:08.174 -07 000000569 INF: Image SNR check: start
17-03-18 03:02:08.174 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:08.184 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:08.184 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:02:08.184 -07 000000569 INF: Image SNR check: pass  [peak (Max-Min)=141.02]
17-03-18 03:02:08.194 -07 000000569 INF: Autofocus start
17-03-18 03:02:08.194 -07 000000569 INF: MeasureProfile start
17-03-18 03:02:08.204 -07 000000569 INF: MeasureProfile done
17-03-18 03:02:08.204 -07 000000569 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:02:08.204 -07 000000569 INF: Autofocus finished
17-03-18 03:02:08.384 -07 000000576 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:02:08.384 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 03:02:08.384 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.178501017166922. ----------
17-03-18 03:02:08.394 -07 000000610 INF: Cycle	107	Tile	1	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:08.394 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37525, sync = True, waitForSettling = True)
17-03-18 03:02:08.394 -07 000000610 INF: Z Motor: Moving to -0.171778 mm, started at -0.178501 mm, distance = 6.72 um
17-03-18 03:02:08.394 -07 000000610 INF: FPGA: Xmit ZDACW 37525\n [Z Motor]
17-03-18 03:02:08.394 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:02:08.404 -07 000000610 INF: FPGA: 'ZDACW 37525' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:02:08.404 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:08.404 -07 000000455 INF: FPGA: Recv ZDACR 37525
17-03-18 03:02:08.414 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.414 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:08.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.564 -07 000000462 INF: FPGA: Recv ZSGSRD 36024
17-03-18 03:02:08.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.574 -07 000000590 INF: FPGA: Recv ZSGSRD 36035
17-03-18 03:02:08.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.584 -07 000000467 INF: FPGA: Recv ZSGSRD 36032
17-03-18 03:02:08.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.594 -07 000000618 INF: FPGA: Recv ZSGSRD 36028
17-03-18 03:02:08.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.604 -07 000000579 INF: FPGA: Recv ZSGSRD 36029
17-03-18 03:02:08.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.614 -07 000000561 INF: FPGA: Recv ZSGSRD 36030
17-03-18 03:02:08.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.624 -07 000000569 INF: FPGA: Recv ZSGSRD 36031
17-03-18 03:02:08.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.634 -07 000000576 INF: FPGA: Recv ZSGSRD 36031
17-03-18 03:02:08.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.644 -07 000000618 INF: FPGA: Recv ZSGSRD 36027
17-03-18 03:02:08.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:08.654 -07 000000576 INF: FPGA: Recv ZSGSRD 36031
17-03-18 03:02:08.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.664 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:08.664 -07 000000461 INF: FPGA: Recv ZPIEZORD 31927
17-03-18 03:02:08.674 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:08.674 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.726 V. Piezo Error = -9.1 V.
17-03-18 03:02:08.674 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36030 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36030 (-170.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36024 (-170.9 uncal um), Max = 36035 (-170.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:08.674 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36030, posNoise = 5, negNoise = 6
17-03-18 03:02:08.674 -07 000000610 INF: Z Motor: After move to -0.171778, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:08.674 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 03:02:08.674 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:08.674 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:08.674 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:08.674 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:08.674 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:08.674 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:08.674 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:08.674 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:08.674 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:02:08.674 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:02:08.674 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:02:08.674 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:08.684 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:08.684 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:08.694 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:02:08.694 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:08.694 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:02:08.694 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:08.704 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:02:08.704 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:08.704 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:02:08.704 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-18 03:02:08.714 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37702 150\n [Camera]
17-03-18 03:02:08.914 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:09.314 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:09.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:09.314 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:09.314 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:09.314 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:02:09.314 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:09.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:09.314 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:09.314 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:09.314 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:09.504 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37702 786
17-03-18 03:02:09.654 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:09.694 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:02:09.694 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:02:09.694 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:09.694 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:02:09.694 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:02:09.694 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:09.704 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:02:09.704 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:02:09.704 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:02:09.704 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:02:09.844 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:09.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:09.844 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:09.974 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:09.974 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:09.984 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:09.984 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:09.984 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-18 03:02:09.994 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:09.994 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:10.044 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:10.044 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:10.044 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37702 150' command took 2 ms to send, 1321 ms to get response, and 1328 ms overall
17-03-18 03:02:10.044 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172097
17-03-18 03:02:10.044 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17210 mm
17-03-18 03:02:10.044 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:10.044 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:02:10.044 -07 000000569 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:02:10.044 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:10.044 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 37595, sync = True, waitForSettling = False)
17-03-18 03:02:10.044 -07 000000462 INF: Z Motor: Moving to -0.172099 mm, started at -0.171788 mm, distance = -0.31 um
17-03-18 03:02:10.044 -07 000000590 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:02:10.054 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:10.054 -07 000000569 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:10.054 -07 000000462 INF: FPGA: Xmit ZDACW 37595\n [Z Motor]
17-03-18 03:02:10.054 -07 000000569 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:10.054 -07 000000569 INF: Y Motor: Moving 1331 steps2
17-03-18 03:02:10.054 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:02:10.064 -07 000000462 INF: FPGA: 'ZDACW 37595' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:02:10.064 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:10.074 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:10.074 -07 000000606 INF: FPGA: Recv ZDACR 37595
17-03-18 03:02:10.084 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:10.084 -07 000000462 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 03:02:10.364 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:02:10.364 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:02:10.364 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:10.364 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:02:10.364 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:02:10.364 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:10.364 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:10.364 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 516 ms.
17-03-18 03:02:10.364 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:10.374 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:02:10.434 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:02:10.434 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:02:10.474 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:10.484 -07 000000561 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:02:10.484 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:02:10.484 -07 000000569 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:10.484 -07 000000569 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:02:10.484 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.144 mm/sec
17-03-18 03:02:11.434 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:11.434 -07 000000512 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:02:11.444 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:11.444 -07 000000569 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:11.474 -07 000000569 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:11.474 -07 000000569 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:11.474 -07 000000569 INF: Y Motor: Moved to 60.7329 after 1428 ms (table move)
17-03-18 03:02:11.474 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172099 mm (DAC = 37595)
17-03-18 03:02:11.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.474 -07 000000501 INF: FPGA: Recv ZSGSRD 36075
17-03-18 03:02:11.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:11.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.484 -07 000000618 INF: FPGA: Recv ZSGSRD 36066
17-03-18 03:02:11.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.494 -07 000000430 INF: FPGA: Recv ZSGSRD 36080
17-03-18 03:02:11.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.504 -07 000000561 INF: FPGA: Recv ZSGSRD 36083
17-03-18 03:02:11.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.514 -07 000000461 INF: FPGA: Recv ZSGSRD 36080
17-03-18 03:02:11.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.524 -07 000000501 INF: FPGA: Recv ZSGSRD 36077
17-03-18 03:02:11.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.534 -07 000000461 INF: FPGA: Recv ZSGSRD 36080
17-03-18 03:02:11.534 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:11.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:11.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.544 -07 000000502 INF: FPGA: Recv ZSGSRD 36079
17-03-18 03:02:11.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.554 -07 000000569 INF: FPGA: Recv ZSGSRD 36075
17-03-18 03:02:11.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.564 -07 000000501 INF: FPGA: Recv ZSGSRD 36077
17-03-18 03:02:11.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:11.574 -07 000000569 INF: FPGA: Recv ZPIEZORD 32028
17-03-18 03:02:11.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.584 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.737 V. Piezo Error = -8.9 V.
17-03-18 03:02:11.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36077 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36078 (-171.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 36066 (-171.1 uncal um), Max = 36083 (-171.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:02:11.584 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36077, posNoise = 6, negNoise = 11
17-03-18 03:02:11.584 -07 000000610 INF: Z Motor: After move to -0.172099, error = 0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:11.584 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 105 ms (allowed 150 ms), total time = 1535 ms
17-03-18 03:02:11.584 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:11.634 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-18 03:02:11.634 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:11.634 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.172089653449445. ----------
17-03-18 03:02:11.634 -07 000000610 INF: Cycle	107	Tile	2	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:11.634 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37418, sync = True, waitForSettling = True)
17-03-18 03:02:11.634 -07 000000610 INF: Z Motor: Moving to -0.171289 mm, started at -0.172090 mm, distance = 0.80 um
17-03-18 03:02:11.634 -07 000000610 INF: FPGA: Xmit ZDACW 37418\n [Z Motor]
17-03-18 03:02:11.644 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:02:11.644 -07 000000610 INF: FPGA: 'ZDACW 37418' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:02:11.644 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:11.644 -07 000000467 INF: FPGA: Recv ZDACR 37418
17-03-18 03:02:11.654 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:11.654 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:11.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.804 -07 000000606 INF: FPGA: Recv ZSGSRD 35949
17-03-18 03:02:11.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.814 -07 000000618 INF: FPGA: Recv ZSGSRD 35959
17-03-18 03:02:11.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.824 -07 000000512 INF: FPGA: Recv ZSGSRD 35954
17-03-18 03:02:11.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.834 -07 000000618 INF: FPGA: Recv ZSGSRD 35955
17-03-18 03:02:11.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.844 -07 000000424 INF: FPGA: Recv ZSGSRD 35949
17-03-18 03:02:11.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.854 -07 000000444 INF: FPGA: Recv ZSGSRD 35958
17-03-18 03:02:11.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.864 -07 000000462 INF: FPGA: Recv ZSGSRD 35951
17-03-18 03:02:11.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.874 -07 000000561 INF: FPGA: Recv ZSGSRD 35948
17-03-18 03:02:11.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.884 -07 000000629 INF: FPGA: Recv ZSGSRD 35950
17-03-18 03:02:11.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:11.894 -07 000000590 INF: FPGA: Recv ZSGSRD 35959
17-03-18 03:02:11.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:11.904 -07 000000502 INF: FPGA: Recv ZPIEZORD 31840
17-03-18 03:02:11.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:11.914 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.710 V. Piezo Error = -9.1 V.
17-03-18 03:02:11.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35953 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35952 (-170.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35948 (-170.4 uncal um), Max = 35959 (-170.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:02:11.914 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35953, posNoise = 6, negNoise = 5
17-03-18 03:02:11.914 -07 000000610 INF: Z Motor: After move to -0.171289, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:11.914 -07 000000610 INF: Z Motor: MoveAbsStepped took 272 ms)
17-03-18 03:02:11.914 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:11.914 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:11.914 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:11.914 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:11.914 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:11.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:11.914 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:02:11.914 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:11.914 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:11.914 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:11.924 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:11.924 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:11.924 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:11.924 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:11.924 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:02:11.924 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:11.934 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:02:11.934 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:02:11.934 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:02:11.934 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:02:11.934 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37595 150\n [Camera]
17-03-18 03:02:12.134 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:12.534 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:12.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:12.534 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:12.534 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:12.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:12.534 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:12.544 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:12.544 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:02:12.544 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:12.544 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:12.724 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37595 786
17-03-18 03:02:12.874 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:12.914 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 365 ms.
17-03-18 03:02:12.914 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 365 ms.
17-03-18 03:02:12.914 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:12.914 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:12.914 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:02:12.914 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:02:12.914 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:12.924 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:12.924 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:02:12.924 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:02:12.984 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.003063,
17-03-18 03:02:13.074 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:13.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:13.074 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:13.074 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:13.074 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:02:13.074 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:13.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:13.074 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:13.194 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:13.194 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 03:02:13.264 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:02:13.264 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:13.264 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37595 150' command took 2 ms to send, 1324 ms to get response, and 1329 ms overall
17-03-18 03:02:13.264 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171949
17-03-18 03:02:13.264 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17195 mm
17-03-18 03:02:13.264 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:13.264 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:02:13.264 -07 000000606 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:02:13.264 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:13.274 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 37562, sync = True, waitForSettling = False)
17-03-18 03:02:13.274 -07 000000467 INF: Z Motor: Moving to -0.171948 mm, started at -0.171293 mm, distance = -0.65 um
17-03-18 03:02:13.274 -07 000000467 INF: FPGA: Xmit ZDACW 37562\n [Z Motor]
17-03-18 03:02:13.274 -07 000000424 INF: FPGA: Recv YRDPOS 124382
17-03-18 03:02:13.274 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:02:13.274 -07 000000606 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:13.274 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:02:13.274 -07 000000606 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:13.274 -07 000000606 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:02:13.284 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:13.284 -07 000000467 INF: FPGA: 'ZDACW 37562' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:13.294 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:13.294 -07 000000424 INF: FPGA: Recv ZDACR 37562
17-03-18 03:02:13.304 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:13.304 -07 000000467 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:02:13.454 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:02:13.454 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:02:13.454 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:13.454 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:13.454 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:02:13.574 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:02:13.574 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:02:13.574 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:13.574 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:13.584 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 506 ms.
17-03-18 03:02:13.664 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:02:13.664 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 382 ms overall
17-03-18 03:02:13.714 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:13.714 -07 000000461 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:02:13.724 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:13.724 -07 000000606 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:13.724 -07 000000606 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:02:13.724 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.840 mm, average velocity = 2.198 mm/sec
17-03-18 03:02:14.674 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:14.674 -07 000000455 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:02:14.684 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:14.684 -07 000000606 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:14.714 -07 000000606 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:14.714 -07 000000606 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:14.714 -07 000000606 INF: Y Motor: Moved to 61.5640 after 1441 ms (table move)
17-03-18 03:02:14.714 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171948 mm (DAC = 37562)
17-03-18 03:02:14.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.714 -07 000000590 INF: FPGA: Recv ZSGSRD 36064
17-03-18 03:02:14.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:02:14.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.724 -07 000000569 INF: FPGA: Recv ZSGSRD 36065
17-03-18 03:02:14.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.734 -07 000000462 INF: FPGA: Recv ZSGSRD 36054
17-03-18 03:02:14.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.744 -07 000000579 INF: FPGA: Recv ZSGSRD 36044
17-03-18 03:02:14.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.754 -07 000000455 INF: FPGA: Recv ZSGSRD 36054
17-03-18 03:02:14.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.764 -07 000000590 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:02:14.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.774 -07 000000461 INF: FPGA: Recv ZSGSRD 36062
17-03-18 03:02:14.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.784 -07 000000590 INF: FPGA: Recv ZSGSRD 36042
17-03-18 03:02:14.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:14.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.794 -07 000000444 INF: FPGA: Recv ZSGSRD 36055
17-03-18 03:02:14.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:14.804 -07 000000606 INF: FPGA: Recv ZSGSRD 36069
17-03-18 03:02:14.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.814 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:14.814 -07 000000467 INF: FPGA: Recv ZPIEZORD 32009
17-03-18 03:02:14.824 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.824 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.732 V. Piezo Error = -8.9 V.
17-03-18 03:02:14.824 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36056 (-171.1 uncal um), Error = 0.9 uncal um, Median = 36055 (-171.1 uncal um), StdDev = 9 (0.1 uncal um), Range = 27 (0.2 uncal um), Min = 36042 (-171.0 uncal um), Max = 36069 (-171.2 uncal um), Pos Noise = 13 (0.1 uncal um), Neg Noise = 14 (0.1 uncal um)
17-03-18 03:02:14.824 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36056, posNoise = 13, negNoise = 14
17-03-18 03:02:14.824 -07 000000610 INF: Z Motor: After move to -0.171948, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:14.824 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 107 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:02:14.824 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:14.874 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:02:14.874 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:14.874 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.171954744994468. ----------
17-03-18 03:02:14.874 -07 000000610 INF: Cycle	107	Tile	3	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:14.874 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37385, sync = True, waitForSettling = True)
17-03-18 03:02:14.874 -07 000000610 INF: Z Motor: Moving to -0.171138 mm, started at -0.171955 mm, distance = 0.82 um
17-03-18 03:02:14.874 -07 000000610 INF: FPGA: Xmit ZDACW 37385\n [Z Motor]
17-03-18 03:02:14.874 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:02:14.884 -07 000000610 INF: FPGA: 'ZDACW 37385' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:14.884 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:14.884 -07 000000576 INF: FPGA: Recv ZDACR 37385
17-03-18 03:02:14.894 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:14.894 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:15.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.044 -07 000000569 INF: FPGA: Recv ZSGSRD 35928
17-03-18 03:02:15.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:15.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.054 -07 000000606 INF: FPGA: Recv ZSGSRD 35938
17-03-18 03:02:15.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:15.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.064 -07 000000626 INF: FPGA: Recv ZSGSRD 35930
17-03-18 03:02:15.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.074 -07 000000606 INF: FPGA: Recv ZSGSRD 35923
17-03-18 03:02:15.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.084 -07 000000512 INF: FPGA: Recv ZSGSRD 35923
17-03-18 03:02:15.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.094 -07 000000569 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:02:15.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.104 -07 000000502 INF: FPGA: Recv ZSGSRD 35932
17-03-18 03:02:15.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.114 -07 000000467 INF: FPGA: Recv ZSGSRD 35931
17-03-18 03:02:15.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.124 -07 000000561 INF: FPGA: Recv ZSGSRD 35929
17-03-18 03:02:15.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:15.134 -07 000000501 INF: FPGA: Recv ZSGSRD 35933
17-03-18 03:02:15.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:15.144 -07 000000455 INF: FPGA: Recv ZPIEZORD 31795
17-03-18 03:02:15.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:15.154 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.705 V. Piezo Error = -9.1 V.
17-03-18 03:02:15.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35930 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35930 (-170.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35923 (-170.2 uncal um), Max = 35938 (-170.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:02:15.154 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35930, posNoise = 8, negNoise = 7
17-03-18 03:02:15.154 -07 000000610 INF: Z Motor: After move to -0.171138, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:15.154 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:02:15.154 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:15.154 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:15.154 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:15.154 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:15.154 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:15.154 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:15.154 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:15.154 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:15.154 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:15.154 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:15.154 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:15.154 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:15.154 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:02:15.154 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:15.154 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:15.154 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:15.164 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:02:15.164 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:15.174 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:02:15.174 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:02:15.174 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37562 150\n [Camera]
17-03-18 03:02:15.374 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:15.774 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:15.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:15.774 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:15.774 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:15.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:15.774 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:15.774 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:15.774 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:02:15.784 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:15.784 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:02:15.964 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37562 786
17-03-18 03:02:16.114 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:16.144 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 365 ms.
17-03-18 03:02:16.144 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 365 ms.
17-03-18 03:02:16.144 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:16.154 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:02:16.154 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:02:16.154 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:16.154 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:16.154 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:16.154 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:02:16.164 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:02:16.304 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:16.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:16.304 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:16.314 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:16.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:16.314 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:16.314 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:16.314 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-18 03:02:16.314 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:16.314 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:02:16.504 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:16.504 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:16.504 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37562 150' command took 2 ms to send, 1321 ms to get response, and 1328 ms overall
17-03-18 03:02:16.504 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:02:16.504 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.171145294264606. ------
17-03-18 03:02:16.504 -07 000000461 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17747 mm
17-03-18 03:02:16.504 -07 000000461 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:16.504 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:16.504 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:02:16.504 -07 000000430 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:02:16.514 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:16.514 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 38767, sync = True, waitForSettling = False)
17-03-18 03:02:16.514 -07 000000629 INF: Z Motor: Moving to -0.177464 mm, started at -0.171145 mm, distance = -6.32 um
17-03-18 03:02:16.514 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:16.514 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:16.514 -07 000000618 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:02:16.524 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:16.524 -07 000000430 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:16.524 -07 000000430 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:16.524 -07 000000430 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:02:16.524 -07 000000629 INF: FPGA: Xmit ZDACW 38767\n [Z Motor]
17-03-18 03:02:16.524 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:02:16.534 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:02:16.534 -07 000000629 INF: FPGA: 'ZDACW 38767' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:16.534 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:16.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:16.544 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:16.554 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:16.554 -07 000000579 INF: FPGA: Recv ZDACR 38767
17-03-18 03:02:16.564 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:02:16.564 -07 000000629 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:02:16.694 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:02:16.694 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:02:16.694 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:16.694 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:02:16.694 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:02:16.694 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:16.704 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:02:16.704 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:02:16.704 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:16.714 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:02:16.734 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:02:16.734 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-18 03:02:16.914 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:02:16.914 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:02:16.964 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:16.964 -07 000000512 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:02:16.974 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:16.974 -07 000000430 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:16.974 -07 000000430 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:02:16.974 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.107 mm/sec
17-03-18 03:02:17.924 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:17.924 -07 000000512 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:02:17.934 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:17.934 -07 000000430 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:17.954 -07 000000430 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:17.964 -07 000000430 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:17.964 -07 000000430 INF: Y Motor: Moved to 62.3955 after 1450 ms (table move)
17-03-18 03:02:17.964 -07 000000461 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177464 mm (DAC = 38767)
17-03-18 03:02:17.964 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:17.964 -07 000000576 INF: FPGA: Recv ZSGSRD 36921
17-03-18 03:02:17.974 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:17.974 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:17.974 -07 000000626 INF: FPGA: Recv ZSGSRD 36913
17-03-18 03:02:17.984 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:17.984 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:17.984 -07 000000455 INF: FPGA: Recv ZSGSRD 36910
17-03-18 03:02:17.994 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:17.994 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:17.994 -07 000000606 INF: FPGA: Recv ZSGSRD 36916
17-03-18 03:02:18.004 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.004 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:18.004 -07 000000430 INF: FPGA: Recv ZSGSRD 36918
17-03-18 03:02:18.014 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.014 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:18.014 -07 000000462 INF: FPGA: Recv ZSGSRD 36913
17-03-18 03:02:18.024 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.034 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:18.034 -07 000000606 INF: FPGA: Recv ZSGSRD 36915
17-03-18 03:02:18.044 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:18.044 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:18.044 -07 000000467 INF: FPGA: Recv ZSGSRD 36915
17-03-18 03:02:18.054 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.054 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:18.054 -07 000000455 INF: FPGA: Recv ZSGSRD 36915
17-03-18 03:02:18.064 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.064 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:18.064 -07 000000629 INF: FPGA: Recv ZSGSRD 36919
17-03-18 03:02:18.074 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.074 -07 000000461 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:18.074 -07 000000591 INF: FPGA: Recv ZPIEZORD 33125
17-03-18 03:02:18.084 -07 000000461 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.084 -07 000000461 INF: Z Motor: Piezo is near 50.8 V (nominally 0 to 100 V), expect near 59.2 V, since DAC is at 5.915 V. Piezo Error = -8.4 V.
17-03-18 03:02:18.084 -07 000000461 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.5 um, Read 10 ADC samples: Avg = 36916 (-176.6 uncal um), Error = 0.9 uncal um, Median = 36915 (-176.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36910 (-176.5 uncal um), Max = 36921 (-176.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:18.084 -07 000000461 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36916, posNoise = 5, negNoise = 6
17-03-18 03:02:18.084 -07 000000461 INF: Z Motor: After move to -0.177464, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:18.084 -07 000000461 INF: Z Motor: Settle wait time = 1453 ms, measure time = 117 ms (allowed 150 ms), total time = 1570 ms
17-03-18 03:02:18.084 -07 000000461 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:18.124 -07 000000461 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:02:18.124 -07 000000461 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:18.124 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:18.124 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:18.124 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:02:18.124 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:18.124 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:18.124 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:18.134 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:18.134 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:02:18.134 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:02:18.134 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:02:18.144 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-18 03:02:18.144 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 03:02:18.144 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:02:18.184 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:02:18.344 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.978563,
17-03-18 03:02:18.484 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:02:18.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:02:18.484 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:02:18.494 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) start.
17-03-18 03:02:18.524 -07 000000501 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:02:18.524 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-18 03:02:18.524 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 385 ms overall
17-03-18 03:02:18.614 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) end. Duration was 120 ms.
17-03-18 03:02:18.614 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:18.614 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:02:18.614 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 125 ms.
17-03-18 03:02:18.624 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:18.624 -07 000000591 INF: Autofocus start
17-03-18 03:02:18.624 -07 000000591 INF: MeasureProfile start
17-03-18 03:02:18.624 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:18.634 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:18.634 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:02:18.634 -07 000000591 INF: MeasureProfile done
17-03-18 03:02:18.634 -07 000000591 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:02:18.634 -07 000000591 INF: Autofocus finished
17-03-18 03:02:18.834 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:02:18.834 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:02:18.834 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.177479567436382. ----------
17-03-18 03:02:18.834 -07 000000610 INF: Cycle	107	Tile	4	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:18.844 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37264, sync = True, waitForSettling = True)
17-03-18 03:02:18.844 -07 000000610 INF: Z Motor: Moving to -0.170584 mm, started at -0.177480 mm, distance = 6.90 um
17-03-18 03:02:18.844 -07 000000610 INF: FPGA: Xmit ZDACW 37264\n [Z Motor]
17-03-18 03:02:18.844 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:02:18.854 -07 000000610 INF: FPGA: 'ZDACW 37264' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.854 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:18.854 -07 000000590 INF: FPGA: Recv ZDACR 37264
17-03-18 03:02:18.864 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:18.864 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:19.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.014 -07 000000579 INF: FPGA: Recv ZSGSRD 35847
17-03-18 03:02:19.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:19.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.024 -07 000000502 INF: FPGA: Recv ZSGSRD 35846
17-03-18 03:02:19.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.034 -07 000000590 INF: FPGA: Recv ZSGSRD 35838
17-03-18 03:02:19.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.044 -07 000000424 INF: FPGA: Recv ZSGSRD 35845
17-03-18 03:02:19.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.054 -07 000000569 INF: FPGA: Recv ZSGSRD 35842
17-03-18 03:02:19.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.064 -07 000000461 INF: FPGA: Recv ZSGSRD 35838
17-03-18 03:02:19.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.074 -07 000000561 INF: FPGA: Recv ZSGSRD 35838
17-03-18 03:02:19.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.084 -07 000000461 INF: FPGA: Recv ZSGSRD 35842
17-03-18 03:02:19.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.094 -07 000000591 INF: FPGA: Recv ZSGSRD 35849
17-03-18 03:02:19.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:19.104 -07 000000569 INF: FPGA: Recv ZSGSRD 35843
17-03-18 03:02:19.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.114 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:19.114 -07 000000579 INF: FPGA: Recv ZPIEZORD 31682
17-03-18 03:02:19.124 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:19.124 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.686 V. Piezo Error = -9.2 V.
17-03-18 03:02:19.124 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35843 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35842 (-169.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35838 (-169.7 uncal um), Max = 35849 (-169.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:02:19.124 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35843, posNoise = 6, negNoise = 5
17-03-18 03:02:19.124 -07 000000610 INF: Z Motor: After move to -0.170584, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:19.124 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:02:19.124 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:19.124 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:19.124 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:19.124 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:19.124 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:19.124 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:19.124 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:19.124 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:19.124 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:19.124 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:19.124 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:02:19.124 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:19.124 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:19.124 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:19.124 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:19.124 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:19.134 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:02:19.134 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:19.144 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:02:19.144 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:02:19.144 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37441 150\n [Camera]
17-03-18 03:02:19.344 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:19.744 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:19.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:19.744 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:19.744 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:19.744 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-18 03:02:19.744 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:19.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:19.744 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:19.744 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:19.744 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:02:19.934 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37441 786
17-03-18 03:02:20.084 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:02:20.124 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:02:20.124 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:02:20.124 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:20.124 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:02:20.124 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:02:20.124 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:20.124 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:20.124 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:20.124 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:02:20.134 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:20.284 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:20.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:20.284 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:20.284 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:20.284 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:02:20.284 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:20.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:20.284 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:20.284 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:20.284 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start.
17-03-18 03:02:20.474 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:02:20.474 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:20.474 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37441 150' command took 2 ms to send, 1321 ms to get response, and 1328 ms overall
17-03-18 03:02:20.594 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171073
17-03-18 03:02:20.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17107 mm
17-03-18 03:02:20.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:20.604 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 37371, sync = True, waitForSettling = False)
17-03-18 03:02:20.604 -07 000000576 INF: Z Motor: Moving to -0.171073 mm, started at -0.170586 mm, distance = -0.49 um
17-03-18 03:02:20.604 -07 000000576 INF: FPGA: Xmit ZDACW 37371\n [Z Motor]
17-03-18 03:02:20.604 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:02:20.604 -07 000000467 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:02:20.604 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:02:20.614 -07 000000576 INF: FPGA: 'ZDACW 37371' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:20.614 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:20.614 -07 000000455 INF: FPGA: Recv ZDACR 37371
17-03-18 03:02:20.624 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:20.624 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:20.624 -07 000000576 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 03:02:20.624 -07 000000424 INF: FPGA: Recv YRDPOS 127787
17-03-18 03:02:20.634 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:02:20.634 -07 000000467 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:20.634 -07 000000467 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:20.634 -07 000000467 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:02:20.634 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:20.674 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:02:20.674 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:02:20.674 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:20.674 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:02:20.674 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:02:20.674 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:20.674 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:20.684 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:02:20.684 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:02:20.684 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:02:21.014 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:02:21.014 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 378 ms overall
17-03-18 03:02:21.054 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:21.064 -07 000000444 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:02:21.064 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:02:21.064 -07 000000467 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:21.064 -07 000000467 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:02:21.064 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.837 mm, average velocity = 2.215 mm/sec
17-03-18 03:02:21.534 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:21.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:22.014 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:22.014 -07 000000502 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:02:22.024 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:22.024 -07 000000467 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:22.044 -07 000000467 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:22.044 -07 000000467 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:22.044 -07 000000467 INF: Y Motor: Moved to 63.2241 after 1447 ms (table move)
17-03-18 03:02:22.054 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171073 mm (DAC = 37371)
17-03-18 03:02:22.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.054 -07 000000606 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:02:22.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:02:22.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.064 -07 000000501 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:02:22.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.074 -07 000000462 INF: FPGA: Recv ZSGSRD 35915
17-03-18 03:02:22.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.084 -07 000000626 INF: FPGA: Recv ZSGSRD 35917
17-03-18 03:02:22.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.094 -07 000000591 INF: FPGA: Recv ZSGSRD 35922
17-03-18 03:02:22.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.104 -07 000000462 INF: FPGA: Recv ZSGSRD 35924
17-03-18 03:02:22.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.114 -07 000000606 INF: FPGA: Recv ZSGSRD 35927
17-03-18 03:02:22.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.124 -07 000000591 INF: FPGA: Recv ZSGSRD 35923
17-03-18 03:02:22.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.134 -07 000000502 INF: FPGA: Recv ZSGSRD 35913
17-03-18 03:02:22.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.144 -07 000000512 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:02:22.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:22.154 -07 000000618 INF: FPGA: Recv ZPIEZORD 31838
17-03-18 03:02:22.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.164 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.702 V. Piezo Error = -9.0 V.
17-03-18 03:02:22.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35920 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35921 (-170.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35913 (-170.2 uncal um), Max = 35927 (-170.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:02:22.164 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35920, posNoise = 7, negNoise = 7
17-03-18 03:02:22.164 -07 000000610 INF: Z Motor: After move to -0.171073, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:22.164 -07 000000610 INF: Z Motor: Settle wait time = 1451 ms, measure time = 108 ms (allowed 150 ms), total time = 1559 ms
17-03-18 03:02:22.164 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:22.214 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:02:22.214 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:22.214 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.171081052143189. ----------
17-03-18 03:02:22.214 -07 000000610 INF: Cycle	107	Tile	5	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:22.214 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37194, sync = True, waitForSettling = True)
17-03-18 03:02:22.214 -07 000000610 INF: Z Motor: Moving to -0.170263 mm, started at -0.171081 mm, distance = 0.82 um
17-03-18 03:02:22.214 -07 000000610 INF: FPGA: Xmit ZDACW 37194\n [Z Motor]
17-03-18 03:02:22.214 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:02:22.224 -07 000000610 INF: FPGA: 'ZDACW 37194' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:22.224 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:22.224 -07 000000430 INF: FPGA: Recv ZDACR 37194
17-03-18 03:02:22.234 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.234 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:22.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.384 -07 000000626 INF: FPGA: Recv ZSGSRD 35791
17-03-18 03:02:22.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:22.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.394 -07 000000444 INF: FPGA: Recv ZSGSRD 35796
17-03-18 03:02:22.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.404 -07 000000455 INF: FPGA: Recv ZSGSRD 35792
17-03-18 03:02:22.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.414 -07 000000569 INF: FPGA: Recv ZSGSRD 35795
17-03-18 03:02:22.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.424 -07 000000591 INF: FPGA: Recv ZSGSRD 35795
17-03-18 03:02:22.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.434 -07 000000629 INF: FPGA: Recv ZSGSRD 35796
17-03-18 03:02:22.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.444 -07 000000444 INF: FPGA: Recv ZSGSRD 35796
17-03-18 03:02:22.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.454 -07 000000502 INF: FPGA: Recv ZSGSRD 35788
17-03-18 03:02:22.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.464 -07 000000569 INF: FPGA: Recv ZSGSRD 35791
17-03-18 03:02:22.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:22.474 -07 000000590 INF: FPGA: Recv ZSGSRD 35793
17-03-18 03:02:22.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:22.484 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:22.484 -07 000000455 INF: FPGA: Recv ZPIEZORD 31647
17-03-18 03:02:22.494 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:22.494 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.675 V. Piezo Error = -9.1 V.
17-03-18 03:02:22.494 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35793 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35794 (-169.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35788 (-169.4 uncal um), Max = 35796 (-169.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:02:22.494 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35793, posNoise = 3, negNoise = 5
17-03-18 03:02:22.494 -07 000000610 INF: Z Motor: After move to -0.170263, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:22.494 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:02:22.494 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:22.494 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:22.494 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:22.494 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:22.494 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:22.494 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:22.494 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:22.494 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:22.494 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:22.494 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:22.494 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:22.494 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:22.494 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:02:22.494 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:22.494 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:22.494 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:22.504 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:02:22.504 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:02:22.504 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:02:22.504 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:02:22.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37371 150\n [Camera]
17-03-18 03:02:22.714 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:23.114 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:23.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:23.114 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:23.114 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:23.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:23.114 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:23.114 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:23.114 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:02:23.124 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:23.124 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:23.304 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37371 786
17-03-18 03:02:23.454 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:23.494 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 368 ms.
17-03-18 03:02:23.494 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:02:23.494 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:23.494 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:02:23.494 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:02:23.494 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:23.494 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:23.494 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:23.494 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:02:23.504 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:23.644 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:23.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:23.644 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:23.654 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:23.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:23.654 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:23.654 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:23.654 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:02:23.654 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:23.654 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:23.704 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.988112,
17-03-18 03:02:23.834 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:02:23.844 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:23.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37371 150' command took 2 ms to send, 1320 ms to get response, and 1328 ms overall
17-03-18 03:02:23.844 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170738
17-03-18 03:02:23.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17074 mm
17-03-18 03:02:23.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:23.844 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:02:23.844 -07 000000430 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:02:23.844 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37298, sync = True, waitForSettling = False)
17-03-18 03:02:23.844 -07 000000502 INF: Z Motor: Moving to -0.170739 mm, started at -0.170265 mm, distance = -0.47 um
17-03-18 03:02:23.844 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:23.854 -07 000000467 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:02:23.854 -07 000000502 INF: FPGA: Xmit ZDACW 37298\n [Z Motor]
17-03-18 03:02:23.854 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:23.854 -07 000000430 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:23.854 -07 000000430 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:23.854 -07 000000430 INF: Y Motor: Moving 1342 steps-17
17-03-18 03:02:23.854 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:02:23.864 -07 000000502 INF: FPGA: 'ZDACW 37298' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:02:23.864 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:23.874 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:23.874 -07 000000455 INF: FPGA: Recv ZDACR 37298
17-03-18 03:02:23.884 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:23.884 -07 000000502 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:02:24.044 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:02:24.044 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:02:24.044 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:24.044 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:02:24.044 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:02:24.044 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:24.044 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:24.044 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:02:24.044 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:24.054 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:02:24.244 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:02:24.244 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 389 ms overall
17-03-18 03:02:24.284 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:24.284 -07 000000606 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:02:24.294 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:24.294 -07 000000430 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:24.294 -07 000000430 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-18 03:02:24.294 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.838 mm, average velocity = 2.155 mm/sec
17-03-18 03:02:25.244 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:25.244 -07 000000444 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:02:25.254 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:25.254 -07 000000430 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:25.274 -07 000000430 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:25.274 -07 000000430 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:02:25.274 -07 000000430 INF: Y Motor: Moved to 64.0571 after 1428 ms (table move)
17-03-18 03:02:25.274 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170739 mm (DAC = 37298)
17-03-18 03:02:25.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.284 -07 000000569 INF: FPGA: Recv ZSGSRD 35864
17-03-18 03:02:25.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:02:25.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.284 -07 000000502 INF: FPGA: Recv ZSGSRD 35874
17-03-18 03:02:25.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.294 -07 000000461 INF: FPGA: Recv ZSGSRD 35869
17-03-18 03:02:25.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.304 -07 000000455 INF: FPGA: Recv ZSGSRD 35866
17-03-18 03:02:25.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.314 -07 000000430 INF: FPGA: Recv ZSGSRD 35869
17-03-18 03:02:25.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.324 -07 000000606 INF: FPGA: Recv ZSGSRD 35864
17-03-18 03:02:25.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.334 -07 000000626 INF: FPGA: Recv ZSGSRD 35870
17-03-18 03:02:25.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.344 -07 000000579 INF: FPGA: Recv ZSGSRD 35870
17-03-18 03:02:25.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.354 -07 000000590 INF: FPGA: Recv ZSGSRD 35874
17-03-18 03:02:25.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.364 -07 000000430 INF: FPGA: Recv ZSGSRD 35862
17-03-18 03:02:25.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.374 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:25.374 -07 000000576 INF: FPGA: Recv ZPIEZORD 31737
17-03-18 03:02:25.384 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.384 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.691 V. Piezo Error = -9.1 V.
17-03-18 03:02:25.384 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.7 um, Read 10 ADC samples: Avg = 35868 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35869 (-169.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35862 (-169.8 uncal um), Max = 35874 (-169.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:25.384 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35868, posNoise = 6, negNoise = 6
17-03-18 03:02:25.384 -07 000000610 INF: Z Motor: After move to -0.170739, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:25.384 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 103 ms (allowed 150 ms), total time = 1533 ms
17-03-18 03:02:25.384 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:25.434 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-18 03:02:25.434 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:25.434 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.170746993111817. ----------
17-03-18 03:02:25.434 -07 000000610 INF: Cycle	107	Tile	6	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:25.434 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37121, sync = True, waitForSettling = True)
17-03-18 03:02:25.434 -07 000000610 INF: Z Motor: Moving to -0.169929 mm, started at -0.170747 mm, distance = 0.82 um
17-03-18 03:02:25.434 -07 000000610 INF: FPGA: Xmit ZDACW 37121\n [Z Motor]
17-03-18 03:02:25.434 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:02:25.444 -07 000000610 INF: FPGA: 'ZDACW 37121' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:25.444 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:25.444 -07 000000629 INF: FPGA: Recv ZDACR 37121
17-03-18 03:02:25.454 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.454 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:25.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.604 -07 000000606 INF: FPGA: Recv ZSGSRD 35742
17-03-18 03:02:25.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:25.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.614 -07 000000467 INF: FPGA: Recv ZSGSRD 35740
17-03-18 03:02:25.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.624 -07 000000569 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:02:25.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.634 -07 000000501 INF: FPGA: Recv ZSGSRD 35741
17-03-18 03:02:25.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.644 -07 000000629 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:02:25.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.654 -07 000000455 INF: FPGA: Recv ZSGSRD 35738
17-03-18 03:02:25.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.664 -07 000000561 INF: FPGA: Recv ZSGSRD 35731
17-03-18 03:02:25.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.674 -07 000000576 INF: FPGA: Recv ZSGSRD 35744
17-03-18 03:02:25.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.684 -07 000000502 INF: FPGA: Recv ZSGSRD 35739
17-03-18 03:02:25.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:25.694 -07 000000579 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:02:25.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.704 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:25.704 -07 000000444 INF: FPGA: Recv ZPIEZORD 31530
17-03-18 03:02:25.714 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:25.714 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.664 V. Piezo Error = -9.3 V.
17-03-18 03:02:25.714 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35741 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35742 (-169.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35731 (-169.0 uncal um), Max = 35745 (-169.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:02:25.714 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35741, posNoise = 4, negNoise = 10
17-03-18 03:02:25.714 -07 000000610 INF: Z Motor: After move to -0.169929, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:25.714 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:02:25.714 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:25.714 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:25.714 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:25.714 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:25.714 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:25.714 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:25.714 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:25.714 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:25.714 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:02:25.714 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:25.714 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:25.714 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:25.724 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:25.724 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:25.724 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:02:25.724 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:25.734 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:02:25.734 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:02:25.734 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:02:25.734 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:02:25.734 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37298 150\n [Camera]
17-03-18 03:02:25.934 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:26.344 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:26.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:26.344 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:26.344 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:26.344 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:26.344 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:26.344 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:26.344 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:02:26.344 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:26.344 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:02:26.534 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37298 786
17-03-18 03:02:26.534 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:26.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:26.684 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:26.724 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:02:26.724 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:02:26.724 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:26.724 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:26.724 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:02:26.724 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:02:26.724 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:26.734 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:26.734 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:02:26.844 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 501 ms.
17-03-18 03:02:26.874 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:26.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:26.874 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:26.874 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:26.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:26.884 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:26.884 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:26.884 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:02:26.884 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:26.884 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:27.064 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:27.064 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:27.064 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37298 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:02:27.064 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170385
17-03-18 03:02:27.074 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17038 mm
17-03-18 03:02:27.074 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:27.074 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:02:27.074 -07 000000424 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:02:27.074 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:27.074 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37221, sync = True, waitForSettling = False)
17-03-18 03:02:27.074 -07 000000618 INF: Z Motor: Moving to -0.170387 mm, started at -0.169931 mm, distance = -0.46 um
17-03-18 03:02:27.074 -07 000000512 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:02:27.084 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:27.084 -07 000000424 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:27.084 -07 000000424 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:27.084 -07 000000424 INF: Y Motor: Moving 1337 steps-12
17-03-18 03:02:27.084 -07 000000618 INF: FPGA: Xmit ZDACW 37221\n [Z Motor]
17-03-18 03:02:27.084 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:02:27.094 -07 000000618 INF: FPGA: 'ZDACW 37221' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:02:27.094 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:27.094 -07 000000561 INF: FPGA: Recv ZDACR 37221
17-03-18 03:02:27.104 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:27.104 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:27.104 -07 000000618 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:02:27.254 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:02:27.254 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:02:27.254 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:27.254 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:02:27.254 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:02:27.254 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:27.264 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:27.264 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:02:27.264 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:27.274 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:02:27.474 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:02:27.474 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:02:27.524 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:27.524 -07 000000512 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:02:27.534 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:02:27.534 -07 000000424 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:27.534 -07 000000424 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:02:27.534 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.835 mm, average velocity = 2.104 mm/sec
17-03-18 03:02:28.484 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:28.484 -07 000000579 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:02:28.494 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.494 -07 000000424 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:28.524 -07 000000424 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:28.524 -07 000000424 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:28.524 -07 000000424 INF: Y Motor: Moved to 64.8789 after 1446 ms (table move)
17-03-18 03:02:28.524 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170387 mm (DAC = 37221)
17-03-18 03:02:28.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.534 -07 000000512 INF: FPGA: Recv ZSGSRD 35809
17-03-18 03:02:28.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:02:28.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.544 -07 000000629 INF: FPGA: Recv ZSGSRD 35819
17-03-18 03:02:28.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.564 -07 000000512 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:02:28.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:28.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.574 -07 000000501 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:02:28.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.594 -07 000000512 INF: FPGA: Recv ZSGSRD 35817
17-03-18 03:02:28.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:28.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.604 -07 000000455 INF: FPGA: Recv ZSGSRD 35806
17-03-18 03:02:28.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.614 -07 000000467 INF: FPGA: Recv ZSGSRD 35817
17-03-18 03:02:28.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.624 -07 000000626 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:02:28.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.634 -07 000000590 INF: FPGA: Recv ZSGSRD 35817
17-03-18 03:02:28.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.644 -07 000000569 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:02:28.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.654 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:28.654 -07 000000455 INF: FPGA: Recv ZPIEZORD 31656
17-03-18 03:02:28.664 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.664 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.680 V. Piezo Error = -9.2 V.
17-03-18 03:02:28.664 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35815 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35816 (-169.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35806 (-169.5 uncal um), Max = 35819 (-169.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:02:28.664 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35815, posNoise = 4, negNoise = 9
17-03-18 03:02:28.664 -07 000000610 INF: Z Motor: After move to -0.170387, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:28.664 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 136 ms (allowed 150 ms), total time = 1586 ms
17-03-18 03:02:28.664 -07 000000610 INF: Z Motor: Waiting extra 14 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:28.684 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-18 03:02:28.684 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:28.684 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.170406509868304. ----------
17-03-18 03:02:28.684 -07 000000610 INF: Cycle	107	Tile	7	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:28.684 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37044, sync = True, waitForSettling = True)
17-03-18 03:02:28.684 -07 000000610 INF: Z Motor: Moving to -0.169577 mm, started at -0.170407 mm, distance = 0.83 um
17-03-18 03:02:28.684 -07 000000610 INF: FPGA: Xmit ZDACW 37044\n [Z Motor]
17-03-18 03:02:28.694 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:02:28.694 -07 000000610 INF: FPGA: 'ZDACW 37044' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:28.694 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:28.694 -07 000000512 INF: FPGA: Recv ZDACR 37044
17-03-18 03:02:28.704 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.704 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:28.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.854 -07 000000455 INF: FPGA: Recv ZSGSRD 35685
17-03-18 03:02:28.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.864 -07 000000606 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:02:28.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.874 -07 000000561 INF: FPGA: Recv ZSGSRD 35691
17-03-18 03:02:28.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.884 -07 000000629 INF: FPGA: Recv ZSGSRD 35683
17-03-18 03:02:28.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.894 -07 000000502 INF: FPGA: Recv ZSGSRD 35688
17-03-18 03:02:28.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.904 -07 000000455 INF: FPGA: Recv ZSGSRD 35689
17-03-18 03:02:28.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.914 -07 000000462 INF: FPGA: Recv ZSGSRD 35690
17-03-18 03:02:28.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.924 -07 000000424 INF: FPGA: Recv ZSGSRD 35679
17-03-18 03:02:28.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.934 -07 000000579 INF: FPGA: Recv ZSGSRD 35685
17-03-18 03:02:28.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:28.944 -07 000000444 INF: FPGA: Recv ZSGSRD 35695
17-03-18 03:02:28.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:28.954 -07 000000455 INF: FPGA: Recv ZPIEZORD 31489
17-03-18 03:02:28.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:28.964 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.653 V. Piezo Error = -9.3 V.
17-03-18 03:02:28.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35688 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35688 (-168.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35679 (-168.7 uncal um), Max = 35695 (-168.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:02:28.964 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35688, posNoise = 7, negNoise = 9
17-03-18 03:02:28.964 -07 000000610 INF: Z Motor: After move to -0.169577, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:28.964 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:02:28.964 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:28.964 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:28.964 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:28.964 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:28.964 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:28.964 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:28.964 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:28.964 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:28.964 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:02:28.964 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:28.964 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:02:28.964 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:28.974 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:28.974 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:28.974 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:28.974 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:28.984 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:02:28.984 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:02:28.984 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:02:28.984 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:02:28.984 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37221 150\n [Camera]
17-03-18 03:02:29.064 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.020806,
17-03-18 03:02:29.194 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 196
17-03-18 03:02:29.594 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 596
17-03-18 03:02:29.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 596
17-03-18 03:02:29.594 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:29.594 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 596
17-03-18 03:02:29.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 596
17-03-18 03:02:29.594 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:29.594 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:29.594 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:02:29.604 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:29.604 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:29.784 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37221 786
17-03-18 03:02:29.934 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:29.974 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:02:29.974 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:02:29.974 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:29.974 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:02:29.974 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:02:29.974 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:29.974 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:29.974 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:02:29.974 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:29.984 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:30.124 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:30.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:30.124 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:30.124 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:30.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:30.134 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:30.134 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:30.134 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:02:30.134 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:30.134 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:30.314 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:02:30.314 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:30.314 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37221 150' command took 2 ms to send, 1317 ms to get response, and 1328 ms overall
17-03-18 03:02:30.324 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:02:30.324 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.1695906349263. ------
17-03-18 03:02:30.324 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:30.324 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17602 mm
17-03-18 03:02:30.324 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:30.324 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:30.324 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 38451, sync = True, waitForSettling = False)
17-03-18 03:02:30.324 -07 000000430 INF: Z Motor: Moving to -0.176017 mm, started at -0.169591 mm, distance = -6.43 um
17-03-18 03:02:30.324 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:02:30.324 -07 000000576 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:02:30.334 -07 000000430 INF: FPGA: Xmit ZDACW 38451\n [Z Motor]
17-03-18 03:02:30.334 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:30.334 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:02:30.344 -07 000000430 INF: FPGA: 'ZDACW 38451' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:02:30.344 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:30.344 -07 000000618 INF: FPGA: Recv ZDACR 38451
17-03-18 03:02:30.354 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:30.354 -07 000000430 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:02:30.354 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:30.354 -07 000000606 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:02:30.364 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 32 ms overall
17-03-18 03:02:30.364 -07 000000576 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:30.364 -07 000000576 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:30.364 -07 000000576 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:02:30.364 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:02:30.374 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:30.514 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:02:30.514 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:02:30.514 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:30.514 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:02:30.514 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:02:30.514 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:30.524 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:30.524 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:02:30.524 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:30.524 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:02:30.564 -07 000000461 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:02:30.564 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 196 ms to get response, and 234 ms overall
17-03-18 03:02:30.744 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:02:30.744 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:02:30.794 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:30.794 -07 000000455 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:02:30.804 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:30.804 -07 000000576 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:30.804 -07 000000576 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:02:30.804 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-18 03:02:31.534 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:31.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:31.754 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:31.754 -07 000000467 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:02:31.764 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:31.764 -07 000000576 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:31.794 -07 000000576 INF: Y Motor: After move to 65.722610, error = -0.008743, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:31.794 -07 000000576 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:31.794 -07 000000576 INF: Y Motor: Moved to 65.7139 after 1465 ms (table move)
17-03-18 03:02:31.794 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176017 mm (DAC = 38451)
17-03-18 03:02:31.794 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.794 -07 000000626 INF: FPGA: Recv ZSGSRD 36690
17-03-18 03:02:31.804 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:31.804 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.804 -07 000000501 INF: FPGA: Recv ZSGSRD 36697
17-03-18 03:02:31.814 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.814 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.814 -07 000000561 INF: FPGA: Recv ZSGSRD 36690
17-03-18 03:02:31.824 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.824 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.824 -07 000000626 INF: FPGA: Recv ZSGSRD 36690
17-03-18 03:02:31.834 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.834 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.834 -07 000000461 INF: FPGA: Recv ZSGSRD 36687
17-03-18 03:02:31.844 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.844 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.844 -07 000000629 INF: FPGA: Recv ZSGSRD 36683
17-03-18 03:02:31.854 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.854 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.854 -07 000000444 INF: FPGA: Recv ZSGSRD 36687
17-03-18 03:02:31.864 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.864 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.864 -07 000000606 INF: FPGA: Recv ZSGSRD 36685
17-03-18 03:02:31.874 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.874 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.874 -07 000000430 INF: FPGA: Recv ZSGSRD 36689
17-03-18 03:02:31.884 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.884 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:31.884 -07 000000579 INF: FPGA: Recv ZSGSRD 36694
17-03-18 03:02:31.894 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.894 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:31.894 -07 000000462 INF: FPGA: Recv ZPIEZORD 32814
17-03-18 03:02:31.904 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:31.904 -07 000000502 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.7 V, since DAC is at 5.867 V. Piezo Error = -8.6 V.
17-03-18 03:02:31.904 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.0 um, Read 10 ADC samples: Avg = 36689 (-175.1 uncal um), Error = 0.9 uncal um, Median = 36690 (-175.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36683 (-175.1 uncal um), Max = 36697 (-175.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:31.904 -07 000000502 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36689, posNoise = 8, negNoise = 6
17-03-18 03:02:31.904 -07 000000502 INF: Z Motor: After move to -0.176017, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:31.904 -07 000000502 INF: Z Motor: Settle wait time = 1469 ms, measure time = 104 ms (allowed 150 ms), total time = 1573 ms
17-03-18 03:02:31.904 -07 000000502 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:31.954 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1626 ms
17-03-18 03:02:31.954 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:31.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:31.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:31.954 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:31.954 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:31.954 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:02:31.954 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:31.954 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:31.954 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:02:31.964 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:31.964 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:02:31.974 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:02:31.974 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:02:31.974 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:02:32.024 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:02:32.324 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:02:32.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:02:32.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:02:32.324 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start.
17-03-18 03:02:32.354 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:02:32.364 -07 000000430 INF: FPGA: Recv CAMSNAP
17-03-18 03:02:32.364 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:02:32.444 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:02:32.444 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:32.454 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:02:32.454 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:02:32.464 -07 000000629 INF: Autofocus start
17-03-18 03:02:32.464 -07 000000629 INF: MeasureProfile start
17-03-18 03:02:32.464 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:32.464 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:32.474 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:32.474 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:02:32.474 -07 000000629 INF: MeasureProfile done
17-03-18 03:02:32.474 -07 000000629 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:02:32.474 -07 000000629 INF: Autofocus finished
17-03-18 03:02:32.674 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:02:32.674 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:02:32.674 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.7138671875, Z-position -0.176021271280203. ----------
17-03-18 03:02:32.674 -07 000000610 INF: Cycle	107	Tile	8	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:32.684 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36984, sync = True, waitForSettling = True)
17-03-18 03:02:32.684 -07 000000610 INF: Z Motor: Moving to -0.169302 mm, started at -0.176021 mm, distance = 6.72 um
17-03-18 03:02:32.684 -07 000000610 INF: FPGA: Xmit ZDACW 36984\n [Z Motor]
17-03-18 03:02:32.684 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:02:32.694 -07 000000610 INF: FPGA: 'ZDACW 36984' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:32.694 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:32.694 -07 000000430 INF: FPGA: Recv ZDACR 36984
17-03-18 03:02:32.704 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.704 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:32.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.854 -07 000000561 INF: FPGA: Recv ZSGSRD 35644
17-03-18 03:02:32.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:32.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.864 -07 000000424 INF: FPGA: Recv ZSGSRD 35647
17-03-18 03:02:32.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.874 -07 000000576 INF: FPGA: Recv ZSGSRD 35643
17-03-18 03:02:32.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.884 -07 000000590 INF: FPGA: Recv ZSGSRD 35640
17-03-18 03:02:32.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.894 -07 000000626 INF: FPGA: Recv ZSGSRD 35640
17-03-18 03:02:32.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.904 -07 000000561 INF: FPGA: Recv ZSGSRD 35642
17-03-18 03:02:32.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.914 -07 000000629 INF: FPGA: Recv ZSGSRD 35648
17-03-18 03:02:32.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.924 -07 000000569 INF: FPGA: Recv ZSGSRD 35643
17-03-18 03:02:32.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.934 -07 000000462 INF: FPGA: Recv ZSGSRD 35646
17-03-18 03:02:32.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:32.944 -07 000000430 INF: FPGA: Recv ZSGSRD 35642
17-03-18 03:02:32.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:32.954 -07 000000501 INF: FPGA: Recv ZPIEZORD 31416
17-03-18 03:02:32.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:32.964 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.643 V. Piezo Error = -9.3 V.
17-03-18 03:02:32.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35644 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35643 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35640 (-168.4 uncal um), Max = 35648 (-168.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:02:32.964 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35644, posNoise = 4, negNoise = 4
17-03-18 03:02:32.964 -07 000000610 INF: Z Motor: After move to -0.169302, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:32.964 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:02:32.964 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:32.964 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:32.964 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:32.964 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:32.964 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:32.964 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:32.964 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:32.964 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:32.964 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:32.964 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:32.964 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:32.964 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:32.974 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:32.974 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:32.974 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:32.974 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:32.984 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:02:32.984 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 03:02:32.984 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:02:32.984 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:32.984 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37160 150\n [Camera]
17-03-18 03:02:33.184 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:33.584 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:33.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:33.584 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:33.594 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:33.594 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:02:33.594 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:33.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:33.594 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:33.594 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:33.594 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:33.784 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37160 786
17-03-18 03:02:33.924 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:33.964 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:02:33.964 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:02:33.964 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:33.974 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:02:33.974 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:02:33.974 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:33.974 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:02:33.974 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:33.974 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:02:33.984 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:02:34.124 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:34.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:34.124 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:34.124 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:34.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:34.124 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:34.134 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:34.134 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:02:34.144 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:34.144 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:02:34.314 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:02:34.314 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:34.314 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37160 150' command took 2 ms to send, 1325 ms to get response, and 1330 ms overall
17-03-18 03:02:34.314 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169785
17-03-18 03:02:34.314 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16979 mm
17-03-18 03:02:34.314 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:34.314 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:02:34.314 -07 000000618 INF: Y Motor: Moving to 66.5526 mm, started at 65.7139 mm, delta = 0.8387 mm
17-03-18 03:02:34.314 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:34.324 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 37090, sync = True, waitForSettling = False)
17-03-18 03:02:34.324 -07 000000424 INF: Z Motor: Moving to -0.169787 mm, started at -0.169308 mm, distance = -0.48 um
17-03-18 03:02:34.324 -07 000000462 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:02:34.334 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:34.334 -07 000000618 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:34.334 -07 000000424 INF: FPGA: Xmit ZDACW 37090\n [Z Motor]
17-03-18 03:02:34.334 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:02:34.464 -07 000000424 INF: FPGA: 'ZDACW 37090' command took 0 ms to send, 0 ms to get response, and 141 ms overall
17-03-18 03:02:34.464 -07 000000618 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:34.464 -07 000000618 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:02:34.474 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:34.474 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.015368,
17-03-18 03:02:34.474 -07 000000579 INF: FPGA: Recv ZDACR 37090
17-03-18 03:02:34.484 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:34.484 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:02:34.484 -07 000000424 INF: Z Motor: MoveAbsStepped took 160 ms (did NOT wait for settling yet))
17-03-18 03:02:34.514 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:02:34.514 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:02:34.514 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:34.514 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:02:34.514 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:02:34.514 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:34.524 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:34.524 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:02:34.524 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:34.524 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:02:34.854 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:02:34.854 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-18 03:02:34.904 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:34.904 -07 000000569 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:02:34.914 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:34.914 -07 000000618 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:34.914 -07 000000618 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:02:34.914 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.839 mm, average velocity = 2.134 mm/sec
17-03-18 03:02:35.864 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:35.864 -07 000000626 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:02:35.874 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:35.874 -07 000000618 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:35.894 -07 000000618 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:35.894 -07 000000618 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:35.894 -07 000000618 INF: Y Motor: Moved to 66.5391 after 1580 ms (table move)
17-03-18 03:02:35.904 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169787 mm (DAC = 37090)
17-03-18 03:02:35.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.904 -07 000000444 INF: FPGA: Recv ZSGSRD 35718
17-03-18 03:02:35.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:02:35.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.914 -07 000000502 INF: FPGA: Recv ZSGSRD 35720
17-03-18 03:02:35.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.924 -07 000000629 INF: FPGA: Recv ZSGSRD 35727
17-03-18 03:02:35.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.934 -07 000000626 INF: FPGA: Recv ZSGSRD 35722
17-03-18 03:02:35.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.944 -07 000000462 INF: FPGA: Recv ZSGSRD 35718
17-03-18 03:02:35.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.954 -07 000000576 INF: FPGA: Recv ZSGSRD 35719
17-03-18 03:02:35.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.964 -07 000000430 INF: FPGA: Recv ZSGSRD 35717
17-03-18 03:02:35.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.974 -07 000000444 INF: FPGA: Recv ZSGSRD 35721
17-03-18 03:02:35.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.984 -07 000000606 INF: FPGA: Recv ZSGSRD 35716
17-03-18 03:02:35.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:35.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:35.994 -07 000000618 INF: FPGA: Recv ZSGSRD 35723
17-03-18 03:02:36.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.004 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:36.004 -07 000000455 INF: FPGA: Recv ZPIEZORD 31531
17-03-18 03:02:36.014 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.014 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.660 V. Piezo Error = -9.2 V.
17-03-18 03:02:36.014 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35720 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35720 (-168.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35716 (-168.9 uncal um), Max = 35727 (-169.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:02:36.014 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35720, posNoise = 7, negNoise = 4
17-03-18 03:02:36.014 -07 000000610 INF: Z Motor: After move to -0.169787, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:36.014 -07 000000610 INF: Z Motor: Settle wait time = 1581 ms, measure time = 109 ms (allowed 150 ms), total time = 1690 ms
17-03-18 03:02:36.014 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:36.064 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1742 ms
17-03-18 03:02:36.064 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:36.064 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.169796209714836. ----------
17-03-18 03:02:36.064 -07 000000610 INF: Cycle	107	Tile	9	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:36.064 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36913, sync = True, waitForSettling = True)
17-03-18 03:02:36.064 -07 000000610 INF: Z Motor: Moving to -0.168977 mm, started at -0.169796 mm, distance = 0.82 um
17-03-18 03:02:36.064 -07 000000610 INF: FPGA: Xmit ZDACW 36913\n [Z Motor]
17-03-18 03:02:36.064 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:02:36.074 -07 000000610 INF: FPGA: 'ZDACW 36913' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:36.074 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:36.074 -07 000000461 INF: FPGA: Recv ZDACR 36913
17-03-18 03:02:36.084 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.084 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:36.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.234 -07 000000444 INF: FPGA: Recv ZSGSRD 35597
17-03-18 03:02:36.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:36.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.244 -07 000000618 INF: FPGA: Recv ZSGSRD 35593
17-03-18 03:02:36.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.254 -07 000000461 INF: FPGA: Recv ZSGSRD 35597
17-03-18 03:02:36.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.264 -07 000000591 INF: FPGA: Recv ZSGSRD 35592
17-03-18 03:02:36.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.274 -07 000000606 INF: FPGA: Recv ZSGSRD 35592
17-03-18 03:02:36.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.284 -07 000000462 INF: FPGA: Recv ZSGSRD 35592
17-03-18 03:02:36.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.294 -07 000000502 INF: FPGA: Recv ZSGSRD 35596
17-03-18 03:02:36.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.304 -07 000000590 INF: FPGA: Recv ZSGSRD 35599
17-03-18 03:02:36.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.314 -07 000000626 INF: FPGA: Recv ZSGSRD 35588
17-03-18 03:02:36.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:36.324 -07 000000561 INF: FPGA: Recv ZSGSRD 35595
17-03-18 03:02:36.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:36.334 -07 000000455 INF: FPGA: Recv ZPIEZORD 31374
17-03-18 03:02:36.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:36.344 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.633 V. Piezo Error = -9.3 V.
17-03-18 03:02:36.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35594 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35594 (-168.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35588 (-168.1 uncal um), Max = 35599 (-168.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:36.344 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35594, posNoise = 5, negNoise = 6
17-03-18 03:02:36.344 -07 000000610 INF: Z Motor: After move to -0.168977, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:36.344 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:02:36.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:36.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:36.344 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:36.344 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:36.344 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:36.344 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:36.344 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:36.344 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:36.344 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:36.344 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:36.344 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:36.344 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:36.354 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:02:36.354 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:36.354 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:36.354 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:36.364 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:02:36.364 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:36.364 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:02:36.364 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:36.364 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37090 150\n [Camera]
17-03-18 03:02:36.534 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:36.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:36.564 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:36.964 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:36.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:36.964 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:36.964 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:36.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:36.964 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:36.974 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:02:36.974 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:36.974 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:36.974 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:37.154 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37090 786
17-03-18 03:02:37.304 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:37.344 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:02:37.344 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:02:37.344 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:37.354 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:02:37.354 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:02:37.354 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:37.354 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:37.354 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:02:37.354 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:37.364 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:02:37.504 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:37.504 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:37.504 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:37.504 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:37.504 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:37.504 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:37.504 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:37.504 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:02:37.514 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:37.514 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:37.694 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1324
17-03-18 03:02:37.694 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:37.694 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37090 150' command took 2 ms to send, 1324 ms to get response, and 1331 ms overall
17-03-18 03:02:37.694 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169818
17-03-18 03:02:37.694 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16982 mm
17-03-18 03:02:37.694 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:37.694 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:02:37.694 -07 000000569 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:02:37.694 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:37.694 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 37097, sync = True, waitForSettling = False)
17-03-18 03:02:37.694 -07 000000606 INF: Z Motor: Moving to -0.169819 mm, started at -0.168987 mm, distance = -0.83 um
17-03-18 03:02:37.704 -07 000000606 INF: FPGA: Xmit ZDACW 37097\n [Z Motor]
17-03-18 03:02:37.704 -07 000000501 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:02:37.704 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 5 ms to get response, and 6 ms overall
17-03-18 03:02:37.704 -07 000000569 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:37.704 -07 000000569 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:37.704 -07 000000569 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:02:37.704 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:02:37.714 -07 000000606 INF: FPGA: 'ZDACW 37097' command took 3 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:37.714 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:37.714 -07 000000591 INF: FPGA: Recv ZDACR 37097
17-03-18 03:02:37.724 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:37.724 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:37.724 -07 000000606 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:02:37.884 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:02:37.884 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:02:37.884 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:37.884 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:02:37.884 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:02:37.884 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:37.894 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:37.894 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:02:37.894 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:37.904 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:02:38.094 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:02:38.094 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-18 03:02:38.144 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:38.144 -07 000000462 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:02:38.154 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:02:38.154 -07 000000569 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:38.154 -07 000000569 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:02:38.154 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.844 mm, average velocity = 2.146 mm/sec
17-03-18 03:02:39.104 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:39.104 -07 000000579 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:02:39.114 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:39.114 -07 000000569 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:39.134 -07 000000569 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:39.134 -07 000000569 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:39.134 -07 000000569 INF: Y Motor: Moved to 67.3721 after 1440 ms (table move)
17-03-18 03:02:39.144 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169819 mm (DAC = 37097)
17-03-18 03:02:39.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.144 -07 000000461 INF: FPGA: Recv ZSGSRD 35723
17-03-18 03:02:39.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:39.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.154 -07 000000444 INF: FPGA: Recv ZSGSRD 35725
17-03-18 03:02:39.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.164 -07 000000576 INF: FPGA: Recv ZSGSRD 35721
17-03-18 03:02:39.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.174 -07 000000462 INF: FPGA: Recv ZSGSRD 35731
17-03-18 03:02:39.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.184 -07 000000501 INF: FPGA: Recv ZSGSRD 35722
17-03-18 03:02:39.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.194 -07 000000590 INF: FPGA: Recv ZSGSRD 35731
17-03-18 03:02:39.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.204 -07 000000444 INF: FPGA: Recv ZSGSRD 35722
17-03-18 03:02:39.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.214 -07 000000629 INF: FPGA: Recv ZSGSRD 35725
17-03-18 03:02:39.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.224 -07 000000462 INF: FPGA: Recv ZSGSRD 35727
17-03-18 03:02:39.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.234 -07 000000576 INF: FPGA: Recv ZSGSRD 35720
17-03-18 03:02:39.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.244 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:39.244 -07 000000629 INF: FPGA: Recv ZPIEZORD 31554
17-03-18 03:02:39.254 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.254 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.661 V. Piezo Error = -9.2 V.
17-03-18 03:02:39.254 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35725 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35724 (-168.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35720 (-168.9 uncal um), Max = 35731 (-169.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:02:39.254 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35725, posNoise = 6, negNoise = 5
17-03-18 03:02:39.254 -07 000000610 INF: Z Motor: After move to -0.169819, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:39.254 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 110 ms (allowed 150 ms), total time = 1551 ms
17-03-18 03:02:39.254 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:39.294 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:02:39.294 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:39.294 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.169828330775545. ----------
17-03-18 03:02:39.294 -07 000000610 INF: Cycle	107	Tile	10	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:39.294 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36920, sync = True, waitForSettling = True)
17-03-18 03:02:39.294 -07 000000610 INF: Z Motor: Moving to -0.169009 mm, started at -0.169828 mm, distance = 0.82 um
17-03-18 03:02:39.314 -07 000000610 INF: FPGA: Xmit ZDACW 36920\n [Z Motor]
17-03-18 03:02:39.314 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:02:39.324 -07 000000610 INF: FPGA: 'ZDACW 36920' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:02:39.324 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:39.324 -07 000000455 INF: FPGA: Recv ZDACR 36920
17-03-18 03:02:39.334 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.334 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:39.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.484 -07 000000606 INF: FPGA: Recv ZSGSRD 35602
17-03-18 03:02:39.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.494 -07 000000576 INF: FPGA: Recv ZSGSRD 35613
17-03-18 03:02:39.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.504 -07 000000579 INF: FPGA: Recv ZSGSRD 35601
17-03-18 03:02:39.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.514 -07 000000467 INF: FPGA: Recv ZSGSRD 35597
17-03-18 03:02:39.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.524 -07 000000461 INF: FPGA: Recv ZSGSRD 35600
17-03-18 03:02:39.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.544 -07 000000501 INF: FPGA: Recv ZSGSRD 35597
17-03-18 03:02:39.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:39.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.554 -07 000000569 INF: FPGA: Recv ZSGSRD 35595
17-03-18 03:02:39.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.564 -07 000000626 INF: FPGA: Recv ZSGSRD 35598
17-03-18 03:02:39.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.574 -07 000000444 INF: FPGA: Recv ZSGSRD 35606
17-03-18 03:02:39.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:39.584 -07 000000629 INF: FPGA: Recv ZSGSRD 35598
17-03-18 03:02:39.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.594 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:39.594 -07 000000430 INF: FPGA: Recv ZPIEZORD 31376
17-03-18 03:02:39.604 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:39.604 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.634 V. Piezo Error = -9.3 V.
17-03-18 03:02:39.604 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35601 (-168.2 uncal um), Error = 0.8 uncal um, Median = 35599 (-168.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35595 (-168.1 uncal um), Max = 35613 (-168.2 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:39.604 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35601, posNoise = 12, negNoise = 6
17-03-18 03:02:39.604 -07 000000610 INF: Z Motor: After move to -0.169009, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:39.604 -07 000000610 INF: Z Motor: MoveAbsStepped took 304 ms)
17-03-18 03:02:39.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:39.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:39.604 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:39.604 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:39.604 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:39.604 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:39.604 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:39.604 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:39.604 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:39.604 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:39.604 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:02:39.604 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:39.614 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:39.614 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:39.614 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:39.614 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:39.624 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:02:39.624 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:02:39.624 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:02:39.624 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:02:39.634 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 37097 150\n [Camera]
17-03-18 03:02:39.834 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:39.854 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.027603,
17-03-18 03:02:40.234 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:40.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:40.234 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:40.234 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:40.234 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:02:40.234 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:40.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:40.234 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:40.234 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:40.234 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-18 03:02:40.424 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37097 786
17-03-18 03:02:40.574 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:40.604 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:02:40.604 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:02:40.604 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:40.614 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:02:40.614 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:02:40.614 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:40.614 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:40.614 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:02:40.614 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:40.624 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:40.764 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:40.764 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:40.774 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:40.774 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:40.774 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-18 03:02:40.774 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:40.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:40.774 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:40.774 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:40.774 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:02:40.954 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:40.954 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:40.954 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 37097 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:02:40.964 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169310
17-03-18 03:02:40.964 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16931 mm
17-03-18 03:02:40.964 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:40.964 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 36986, sync = True, waitForSettling = False)
17-03-18 03:02:40.964 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:02:40.964 -07 000000629 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 03:02:40.964 -07 000000501 INF: Z Motor: Moving to -0.169311 mm, started at -0.169032 mm, distance = -0.28 um
17-03-18 03:02:40.964 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:40.964 -07 000000467 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:02:40.974 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:02:40.974 -07 000000629 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:40.974 -07 000000629 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:40.974 -07 000000629 INF: Y Motor: Moving 1345 steps-22
17-03-18 03:02:40.974 -07 000000501 INF: FPGA: Xmit ZDACW 36986\n [Z Motor]
17-03-18 03:02:40.974 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:02:40.984 -07 000000501 INF: FPGA: 'ZDACW 36986' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:02:40.984 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:40.984 -07 000000618 INF: FPGA: Recv ZDACR 36986
17-03-18 03:02:40.994 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:40.994 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:40.994 -07 000000501 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 03:02:41.154 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:02:41.154 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:02:41.154 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:41.154 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:02:41.154 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:02:41.154 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:41.154 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:41.164 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:41.164 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:02:41.164 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:02:41.364 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:02:41.364 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 2 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 03:02:41.414 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:41.424 -07 000000576 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:02:41.424 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:02:41.424 -07 000000629 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:41.424 -07 000000629 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:02:41.424 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.841 mm, average velocity = 2.107 mm/sec
17-03-18 03:02:41.534 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:41.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:42.374 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:42.374 -07 000000606 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:02:42.384 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.384 -07 000000629 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:42.404 -07 000000629 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:42.404 -07 000000629 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:42.404 -07 000000629 INF: Y Motor: Moved to 68.2051 after 1444 ms (table move)
17-03-18 03:02:42.414 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169311 mm (DAC = 36986)
17-03-18 03:02:42.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.414 -07 000000430 INF: FPGA: Recv ZSGSRD 35646
17-03-18 03:02:42.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:42.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.424 -07 000000576 INF: FPGA: Recv ZSGSRD 35647
17-03-18 03:02:42.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.434 -07 000000591 INF: FPGA: Recv ZSGSRD 35653
17-03-18 03:02:42.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.444 -07 000000501 INF: FPGA: Recv ZSGSRD 35647
17-03-18 03:02:42.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.454 -07 000000629 INF: FPGA: Recv ZSGSRD 35646
17-03-18 03:02:42.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.464 -07 000000444 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:02:42.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.474 -07 000000461 INF: FPGA: Recv ZSGSRD 35641
17-03-18 03:02:42.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.484 -07 000000467 INF: FPGA: Recv ZSGSRD 35655
17-03-18 03:02:42.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.494 -07 000000618 INF: FPGA: Recv ZSGSRD 35636
17-03-18 03:02:42.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.504 -07 000000502 INF: FPGA: Recv ZSGSRD 35650
17-03-18 03:02:42.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:42.514 -07 000000501 INF: FPGA: Recv ZPIEZORD 31443
17-03-18 03:02:42.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.524 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.644 V. Piezo Error = -9.3 V.
17-03-18 03:02:42.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35646 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35646 (-168.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 35636 (-168.4 uncal um), Max = 35655 (-168.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:02:42.524 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35646, posNoise = 9, negNoise = 10
17-03-18 03:02:42.524 -07 000000610 INF: Z Motor: After move to -0.169311, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:42.524 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 107 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:02:42.524 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:42.574 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 03:02:42.574 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:42.574 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.169320818016346. ----------
17-03-18 03:02:42.574 -07 000000610 INF: Cycle	107	Tile	11	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:42.574 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36809, sync = True, waitForSettling = True)
17-03-18 03:02:42.574 -07 000000610 INF: Z Motor: Moving to -0.168501 mm, started at -0.169321 mm, distance = 0.82 um
17-03-18 03:02:42.574 -07 000000610 INF: FPGA: Xmit ZDACW 36809\n [Z Motor]
17-03-18 03:02:42.574 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:02:42.584 -07 000000610 INF: FPGA: 'ZDACW 36809' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:42.584 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:42.584 -07 000000444 INF: FPGA: Recv ZDACR 36809
17-03-18 03:02:42.594 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.594 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:42.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.744 -07 000000461 INF: FPGA: Recv ZSGSRD 35521
17-03-18 03:02:42.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:42.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.754 -07 000000590 INF: FPGA: Recv ZSGSRD 35525
17-03-18 03:02:42.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.764 -07 000000576 INF: FPGA: Recv ZSGSRD 35522
17-03-18 03:02:42.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.774 -07 000000512 INF: FPGA: Recv ZSGSRD 35524
17-03-18 03:02:42.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.784 -07 000000430 INF: FPGA: Recv ZSGSRD 35520
17-03-18 03:02:42.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.794 -07 000000467 INF: FPGA: Recv ZSGSRD 35522
17-03-18 03:02:42.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.804 -07 000000569 INF: FPGA: Recv ZSGSRD 35526
17-03-18 03:02:42.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.814 -07 000000618 INF: FPGA: Recv ZSGSRD 35521
17-03-18 03:02:42.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.824 -07 000000461 INF: FPGA: Recv ZSGSRD 35527
17-03-18 03:02:42.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:42.834 -07 000000462 INF: FPGA: Recv ZSGSRD 35519
17-03-18 03:02:42.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.844 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:42.844 -07 000000579 INF: FPGA: Recv ZPIEZORD 31286
17-03-18 03:02:42.854 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:42.854 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.617 V. Piezo Error = -9.3 V.
17-03-18 03:02:42.854 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35523 (-167.7 uncal um), Error = 0.8 uncal um, Median = 35522 (-167.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35519 (-167.6 uncal um), Max = 35527 (-167.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:02:42.854 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35523, posNoise = 4, negNoise = 4
17-03-18 03:02:42.854 -07 000000610 INF: Z Motor: After move to -0.168501, error = -0.000030, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:42.854 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:02:42.854 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:42.854 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:42.854 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:42.854 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:42.854 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:42.854 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:42.854 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:42.854 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:42.854 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:42.854 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:42.854 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:42.854 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:42.854 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:42.864 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:42.864 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:02:42.864 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:42.874 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:02:42.874 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:02:42.874 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:02:42.874 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:02:42.874 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36986 150\n [Camera]
17-03-18 03:02:43.074 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:43.484 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:43.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:43.484 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:43.484 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:43.484 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:02:43.484 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:43.484 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:43.484 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:43.484 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:43.484 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:02:43.674 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36986 786
17-03-18 03:02:43.824 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:43.854 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:02:43.854 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:02:43.854 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:02:43.854 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:43.854 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:02:43.854 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:43.864 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:43.864 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:43.864 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:02:43.874 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:44.014 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:44.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:44.014 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:44.144 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:44.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:44.144 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:44.144 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:44.144 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:02:44.144 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:44.144 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:44.204 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:02:44.204 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:44.204 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36986 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:02:44.214 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:02:44.214 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.205078125, Z-Position -0.168530639922909. ------
17-03-18 03:02:44.214 -07 000000462 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17516 mm
17-03-18 03:02:44.214 -07 000000462 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:44.214 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:44.214 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:44.214 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:02:44.214 -07 000000579 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-18 03:02:44.224 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 38263, sync = True, waitForSettling = False)
17-03-18 03:02:44.224 -07 000000576 INF: Z Motor: Moving to -0.175157 mm, started at -0.168531 mm, distance = -6.63 um
17-03-18 03:02:44.224 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:44.224 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:44.224 -07 000000561 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:02:44.234 -07 000000579 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:44.234 -07 000000579 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:44.234 -07 000000576 INF: FPGA: Xmit ZDACW 38263\n [Z Motor]
17-03-18 03:02:44.234 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:02:44.234 -07 000000579 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:44.234 -07 000000579 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:02:44.244 -07 000000424 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:02:44.244 -07 000000576 INF: FPGA: 'ZDACW 38263' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:44.254 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:44.264 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:44.264 -07 000000561 INF: FPGA: Recv ZDACR 38263
17-03-18 03:02:44.274 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:02:44.274 -07 000000576 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-18 03:02:44.444 -07 000000430 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:02:44.444 -07 000000424 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-18 03:02:44.524 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:02:44.524 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:02:44.524 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:44.524 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:02:44.524 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:02:44.524 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:44.534 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:44.534 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 513 ms.
17-03-18 03:02:44.534 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:44.534 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:02:44.624 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:02:44.624 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall
17-03-18 03:02:44.674 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:44.684 -07 000000467 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:02:44.684 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:02:44.684 -07 000000579 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:44.684 -07 000000579 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:02:44.684 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.838 mm, average velocity = 2.142 mm/sec
17-03-18 03:02:45.214 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.020806,
17-03-18 03:02:45.634 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:45.634 -07 000000618 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:02:45.644 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:45.644 -07 000000579 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:45.664 -07 000000579 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:45.664 -07 000000579 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:45.664 -07 000000579 INF: Y Motor: Moved to 69.0273 after 1448 ms (table move)
17-03-18 03:02:45.674 -07 000000462 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175157 mm (DAC = 38263)
17-03-18 03:02:45.674 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.674 -07 000000626 INF: FPGA: Recv ZSGSRD 36553
17-03-18 03:02:45.684 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:45.684 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.684 -07 000000430 INF: FPGA: Recv ZSGSRD 36559
17-03-18 03:02:45.694 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.694 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.694 -07 000000467 INF: FPGA: Recv ZSGSRD 36555
17-03-18 03:02:45.704 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.704 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.704 -07 000000591 INF: FPGA: Recv ZSGSRD 36558
17-03-18 03:02:45.714 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.714 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.714 -07 000000444 INF: FPGA: Recv ZSGSRD 36554
17-03-18 03:02:45.724 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.724 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.724 -07 000000424 INF: FPGA: Recv ZSGSRD 36559
17-03-18 03:02:45.734 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.734 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.734 -07 000000606 INF: FPGA: Recv ZSGSRD 36555
17-03-18 03:02:45.744 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.744 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.744 -07 000000467 INF: FPGA: Recv ZSGSRD 36553
17-03-18 03:02:45.754 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.754 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.754 -07 000000430 INF: FPGA: Recv ZSGSRD 36555
17-03-18 03:02:45.764 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.764 -07 000000462 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:45.764 -07 000000444 INF: FPGA: Recv ZSGSRD 36554
17-03-18 03:02:45.774 -07 000000462 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.774 -07 000000462 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:45.774 -07 000000502 INF: FPGA: Recv ZPIEZORD 32656
17-03-18 03:02:45.784 -07 000000462 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:45.784 -07 000000462 INF: Z Motor: Piezo is near 49.8 V (nominally 0 to 100 V), expect near 58.4 V, since DAC is at 5.839 V. Piezo Error = -8.6 V.
17-03-18 03:02:45.784 -07 000000462 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.2 um, Read 10 ADC samples: Avg = 36556 (-174.3 uncal um), Error = 0.9 uncal um, Median = 36555 (-174.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 36553 (-174.3 uncal um), Max = 36559 (-174.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:02:45.784 -07 000000462 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36556, posNoise = 3, negNoise = 3
17-03-18 03:02:45.784 -07 000000462 INF: Z Motor: After move to -0.175157, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:45.784 -07 000000462 INF: Z Motor: Settle wait time = 1451 ms, measure time = 109 ms (allowed 150 ms), total time = 1560 ms
17-03-18 03:02:45.784 -07 000000462 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:45.834 -07 000000462 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms
17-03-18 03:02:45.834 -07 000000462 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:45.834 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:45.834 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:45.834 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:45.834 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:45.834 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:02:45.834 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:45.834 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:45.834 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:02:45.844 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:45.844 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:02:45.854 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:02:45.854 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 03:02:45.854 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:02:45.894 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:02:46.194 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:02:46.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:02:46.194 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:02:46.204 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start.
17-03-18 03:02:46.234 -07 000000576 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:02:46.234 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 03:02:46.234 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 03:02:46.324 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:02:46.324 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:46.324 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:02:46.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:02:46.434 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:46.434 -07 000000462 INF: Autofocus start
17-03-18 03:02:46.434 -07 000000462 INF: MeasureProfile start
17-03-18 03:02:46.434 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:46.444 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:46.444 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:02:46.444 -07 000000462 INF: MeasureProfile done
17-03-18 03:02:46.444 -07 000000462 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:02:46.444 -07 000000462 INF: Autofocus finished
17-03-18 03:02:46.534 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:46.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:46.644 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:02:46.644 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:02:46.644 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.175166851065348. ----------
17-03-18 03:02:46.644 -07 000000610 INF: Cycle	107	Tile	12	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:46.654 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36760, sync = True, waitForSettling = True)
17-03-18 03:02:46.654 -07 000000610 INF: Z Motor: Moving to -0.168276 mm, started at -0.175167 mm, distance = 6.89 um
17-03-18 03:02:46.654 -07 000000610 INF: FPGA: Xmit ZDACW 36760\n [Z Motor]
17-03-18 03:02:46.654 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:02:46.664 -07 000000610 INF: FPGA: 'ZDACW 36760' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:46.664 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:46.664 -07 000000561 INF: FPGA: Recv ZDACR 36760
17-03-18 03:02:46.674 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.674 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:46.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.824 -07 000000424 INF: FPGA: Recv ZSGSRD 35486
17-03-18 03:02:46.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:46.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.834 -07 000000467 INF: FPGA: Recv ZSGSRD 35483
17-03-18 03:02:46.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.844 -07 000000591 INF: FPGA: Recv ZSGSRD 35488
17-03-18 03:02:46.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.854 -07 000000629 INF: FPGA: Recv ZSGSRD 35485
17-03-18 03:02:46.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.864 -07 000000590 INF: FPGA: Recv ZSGSRD 35483
17-03-18 03:02:46.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.874 -07 000000462 INF: FPGA: Recv ZSGSRD 35487
17-03-18 03:02:46.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.884 -07 000000512 INF: FPGA: Recv ZSGSRD 35486
17-03-18 03:02:46.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.894 -07 000000430 INF: FPGA: Recv ZSGSRD 35484
17-03-18 03:02:46.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.904 -07 000000502 INF: FPGA: Recv ZSGSRD 35483
17-03-18 03:02:46.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:46.914 -07 000000561 INF: FPGA: Recv ZSGSRD 35484
17-03-18 03:02:46.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.924 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:46.924 -07 000000424 INF: FPGA: Recv ZPIEZORD 31264
17-03-18 03:02:46.934 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:46.934 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.609 V. Piezo Error = -9.3 V.
17-03-18 03:02:46.934 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.3 um, Read 10 ADC samples: Avg = 35485 (-167.4 uncal um), Error = 0.9 uncal um, Median = 35484 (-167.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 35483 (-167.4 uncal um), Max = 35488 (-167.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:02:46.934 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35485, posNoise = 3, negNoise = 2
17-03-18 03:02:46.934 -07 000000610 INF: Z Motor: After move to -0.168276, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:46.934 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:02:46.934 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:46.934 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:46.934 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:46.934 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:46.934 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:46.934 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:46.934 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:46.934 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:46.934 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:46.934 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:46.934 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:46.934 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:46.944 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:46.944 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:46.944 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:46.944 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:46.954 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:02:46.954 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:02:46.954 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:02:46.954 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:02:46.954 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36937 150\n [Camera]
17-03-18 03:02:47.154 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:47.564 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:47.564 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:47.564 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:47.564 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:47.564 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:47.564 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:47.564 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:47.564 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:02:47.564 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:47.564 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:47.754 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36937 786
17-03-18 03:02:47.904 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:47.934 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:02:47.934 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:02:47.934 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:02:47.934 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:02:47.934 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:47.934 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:47.944 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:47.944 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:02:47.944 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:47.954 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:48.094 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:02:48.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:02:48.094 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:48.104 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:02:48.104 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:02:48.104 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:48.104 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:48.104 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:02:48.104 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:48.104 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:02:48.284 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:48.284 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:48.284 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36937 150' command took 2 ms to send, 1318 ms to get response, and 1329 ms overall
17-03-18 03:02:48.294 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168616
17-03-18 03:02:48.294 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16862 mm
17-03-18 03:02:48.294 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:48.304 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:02:48.304 -07 000000626 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:02:48.304 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:48.304 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 36834, sync = True, waitForSettling = False)
17-03-18 03:02:48.304 -07 000000444 INF: Z Motor: Moving to -0.168615 mm, started at -0.168287 mm, distance = -0.33 um
17-03-18 03:02:48.304 -07 000000455 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:02:48.314 -07 000000444 INF: FPGA: Xmit ZDACW 36834\n [Z Motor]
17-03-18 03:02:48.314 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:48.314 -07 000000626 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:48.314 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:02:48.314 -07 000000626 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:48.314 -07 000000626 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:02:48.324 -07 000000444 INF: FPGA: 'ZDACW 36834' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:02:48.324 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:48.324 -07 000000455 INF: FPGA: Recv ZDACR 36834
17-03-18 03:02:48.334 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:48.334 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:48.334 -07 000000444 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:02:48.494 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:02:48.494 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:02:48.494 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:48.494 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:02:48.494 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:02:48.494 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:48.494 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:48.494 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:02:48.494 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:48.504 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 03:02:48.704 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:02:48.704 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-18 03:02:48.754 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:48.754 -07 000000512 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:02:48.764 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:02:48.764 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:48.764 -07 000000626 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:02:48.764 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.845 mm, average velocity = 2.156 mm/sec
17-03-18 03:02:49.714 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:49.714 -07 000000467 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:02:49.724 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.724 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:49.754 -07 000000626 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:49.754 -07 000000626 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:49.754 -07 000000626 INF: Y Motor: Moved to 69.8633 after 1452 ms (table move)
17-03-18 03:02:49.754 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168615 mm (DAC = 36834)
17-03-18 03:02:49.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.754 -07 000000501 INF: FPGA: Recv ZSGSRD 35531
17-03-18 03:02:49.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:49.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.764 -07 000000591 INF: FPGA: Recv ZSGSRD 35539
17-03-18 03:02:49.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.774 -07 000000455 INF: FPGA: Recv ZSGSRD 35544
17-03-18 03:02:49.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.784 -07 000000590 INF: FPGA: Recv ZSGSRD 35537
17-03-18 03:02:49.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.794 -07 000000618 INF: FPGA: Recv ZSGSRD 35536
17-03-18 03:02:49.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.804 -07 000000579 INF: FPGA: Recv ZSGSRD 35537
17-03-18 03:02:49.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.814 -07 000000467 INF: FPGA: Recv ZSGSRD 35529
17-03-18 03:02:49.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.824 -07 000000455 INF: FPGA: Recv ZSGSRD 35534
17-03-18 03:02:49.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.834 -07 000000502 INF: FPGA: Recv ZSGSRD 35538
17-03-18 03:02:49.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:49.844 -07 000000606 INF: FPGA: Recv ZSGSRD 35543
17-03-18 03:02:49.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.854 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:49.854 -07 000000590 INF: FPGA: Recv ZPIEZORD 31352
17-03-18 03:02:49.864 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.864 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.621 V. Piezo Error = -9.2 V.
17-03-18 03:02:49.864 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35537 (-167.7 uncal um), Error = 0.9 uncal um, Median = 35537 (-167.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35529 (-167.7 uncal um), Max = 35544 (-167.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:02:49.864 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35537, posNoise = 7, negNoise = 8
17-03-18 03:02:49.864 -07 000000610 INF: Z Motor: After move to -0.168615, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:49.864 -07 000000610 INF: Z Motor: Settle wait time = 1454 ms, measure time = 104 ms (allowed 150 ms), total time = 1558 ms
17-03-18 03:02:49.864 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:49.914 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:02:49.914 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:49.914 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.168620578892894. ----------
17-03-18 03:02:49.914 -07 000000610 INF: Cycle	107	Tile	13	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:49.914 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36657, sync = True, waitForSettling = True)
17-03-18 03:02:49.914 -07 000000610 INF: Z Motor: Moving to -0.167805 mm, started at -0.168621 mm, distance = 0.82 um
17-03-18 03:02:49.914 -07 000000610 INF: FPGA: Xmit ZDACW 36657\n [Z Motor]
17-03-18 03:02:49.914 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:02:49.924 -07 000000610 INF: FPGA: 'ZDACW 36657' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:02:49.924 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:49.924 -07 000000455 INF: FPGA: Recv ZDACR 36657
17-03-18 03:02:49.934 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:49.934 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:50.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.084 -07 000000591 INF: FPGA: Recv ZSGSRD 35412
17-03-18 03:02:50.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:50.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.094 -07 000000467 INF: FPGA: Recv ZSGSRD 35401
17-03-18 03:02:50.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.104 -07 000000590 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:02:50.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.114 -07 000000444 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:02:50.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.124 -07 000000455 INF: FPGA: Recv ZSGSRD 35412
17-03-18 03:02:50.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.134 -07 000000502 INF: FPGA: Recv ZSGSRD 35410
17-03-18 03:02:50.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.144 -07 000000618 INF: FPGA: Recv ZSGSRD 35412
17-03-18 03:02:50.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.154 -07 000000430 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:02:50.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.164 -07 000000444 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:02:50.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:50.174 -07 000000561 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:02:50.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.184 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:50.184 -07 000000512 INF: FPGA: Recv ZPIEZORD 31187
17-03-18 03:02:50.194 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:50.194 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.594 V. Piezo Error = -9.3 V.
17-03-18 03:02:50.194 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35412 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35412 (-166.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35401 (-166.9 uncal um), Max = 35414 (-167.0 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:02:50.194 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35412, posNoise = 2, negNoise = 11
17-03-18 03:02:50.194 -07 000000610 INF: Z Motor: After move to -0.167805, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:50.194 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:02:50.194 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:50.194 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:50.194 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:50.194 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:50.194 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:50.194 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:50.194 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:50.194 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:50.194 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:02:50.194 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:50.194 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:50.194 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:50.204 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:50.204 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:50.204 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:50.204 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:50.204 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:02:50.204 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:02:50.214 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:02:50.214 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:02:50.214 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36834 150\n [Camera]
17-03-18 03:02:50.414 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:50.574 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.018051,
17-03-18 03:02:50.814 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:50.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:50.814 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:50.814 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:50.814 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:50.814 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:50.814 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:50.814 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-18 03:02:50.824 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:50.824 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:02:51.004 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36834 786
17-03-18 03:02:51.154 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:51.194 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:02:51.194 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:02:51.194 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:51.204 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:02:51.204 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:02:51.204 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:51.204 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:51.204 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:02:51.204 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:51.214 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:02:51.354 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:51.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:51.354 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:51.354 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:51.354 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:02:51.354 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:51.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:51.354 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:51.474 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:51.474 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:02:51.534 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:51.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:51.544 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:51.544 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:51.544 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36834 150' command took 2 ms to send, 1323 ms to get response, and 1328 ms overall
17-03-18 03:02:51.544 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167750
17-03-18 03:02:51.544 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16775 mm
17-03-18 03:02:51.544 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:51.544 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:02:51.544 -07 000000467 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 03:02:51.544 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:51.544 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 36645, sync = True, waitForSettling = False)
17-03-18 03:02:51.544 -07 000000618 INF: Z Motor: Moving to -0.167750 mm, started at -0.167818 mm, distance = 0.07 um
17-03-18 03:02:51.554 -07 000000455 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:02:51.554 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:02:51.554 -07 000000467 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:51.554 -07 000000467 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:51.554 -07 000000467 INF: Y Motor: Moving 1343 steps-19
17-03-18 03:02:51.554 -07 000000618 INF: FPGA: Xmit ZDACW 36645\n [Z Motor]
17-03-18 03:02:51.554 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:02:51.564 -07 000000618 INF: FPGA: 'ZDACW 36645' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:02:51.564 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:51.564 -07 000000626 INF: FPGA: Recv ZDACR 36645
17-03-18 03:02:51.574 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:51.574 -07 000000618 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:02:51.574 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:51.734 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:02:51.734 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:02:51.734 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:51.744 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:51.744 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:02:51.854 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:02:51.864 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:02:51.864 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:51.864 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:02:51.874 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 03:02:51.944 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:02:51.944 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 03:02:51.994 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:51.994 -07 000000561 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:02:52.004 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:52.004 -07 000000467 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:52.004 -07 000000467 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:02:52.004 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.114 mm/sec
17-03-18 03:02:52.954 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:52.954 -07 000000462 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:02:52.964 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:52.964 -07 000000467 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:52.984 -07 000000467 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:52.984 -07 000000467 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:52.984 -07 000000467 INF: Y Motor: Moved to 70.6885 after 1441 ms (table move)
17-03-18 03:02:52.994 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167750 mm (DAC = 36645)
17-03-18 03:02:52.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:52.994 -07 000000569 INF: FPGA: Recv ZSGSRD 35408
17-03-18 03:02:53.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:53.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.004 -07 000000430 INF: FPGA: Recv ZSGSRD 35404
17-03-18 03:02:53.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.014 -07 000000590 INF: FPGA: Recv ZSGSRD 35407
17-03-18 03:02:53.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.024 -07 000000462 INF: FPGA: Recv ZSGSRD 35405
17-03-18 03:02:53.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.034 -07 000000461 INF: FPGA: Recv ZSGSRD 35408
17-03-18 03:02:53.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:53.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.044 -07 000000629 INF: FPGA: Recv ZSGSRD 35402
17-03-18 03:02:53.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.054 -07 000000569 INF: FPGA: Recv ZSGSRD 35401
17-03-18 03:02:53.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.064 -07 000000591 INF: FPGA: Recv ZSGSRD 35396
17-03-18 03:02:53.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.074 -07 000000502 INF: FPGA: Recv ZSGSRD 35403
17-03-18 03:02:53.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.084 -07 000000424 INF: FPGA: Recv ZSGSRD 35405
17-03-18 03:02:53.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.094 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:53.094 -07 000000606 INF: FPGA: Recv ZPIEZORD 31129
17-03-18 03:02:53.104 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.104 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.592 V. Piezo Error = -9.4 V.
17-03-18 03:02:53.104 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35404 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35404 (-166.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35396 (-166.8 uncal um), Max = 35408 (-166.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:02:53.104 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35404, posNoise = 4, negNoise = 8
17-03-18 03:02:53.104 -07 000000610 INF: Z Motor: After move to -0.167750, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:53.104 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 110 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:02:53.104 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:53.144 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:02:53.144 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:53.144 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.16776615867804. ----------
17-03-18 03:02:53.144 -07 000000610 INF: Cycle	107	Tile	14	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:53.144 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36468, sync = True, waitForSettling = True)
17-03-18 03:02:53.144 -07 000000610 INF: Z Motor: Moving to -0.166940 mm, started at -0.167766 mm, distance = 0.83 um
17-03-18 03:02:53.144 -07 000000610 INF: FPGA: Xmit ZDACW 36468\n [Z Motor]
17-03-18 03:02:53.144 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:02:53.154 -07 000000610 INF: FPGA: 'ZDACW 36468' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:53.154 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:53.154 -07 000000579 INF: FPGA: Recv ZDACR 36468
17-03-18 03:02:53.164 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.164 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:53.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.314 -07 000000561 INF: FPGA: Recv ZSGSRD 35280
17-03-18 03:02:53.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:53.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.324 -07 000000467 INF: FPGA: Recv ZSGSRD 35282
17-03-18 03:02:53.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.334 -07 000000502 INF: FPGA: Recv ZSGSRD 35277
17-03-18 03:02:53.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.344 -07 000000424 INF: FPGA: Recv ZSGSRD 35274
17-03-18 03:02:53.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.354 -07 000000606 INF: FPGA: Recv ZSGSRD 35281
17-03-18 03:02:53.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.364 -07 000000569 INF: FPGA: Recv ZSGSRD 35272
17-03-18 03:02:53.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.374 -07 000000626 INF: FPGA: Recv ZSGSRD 35277
17-03-18 03:02:53.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.384 -07 000000576 INF: FPGA: Recv ZSGSRD 35277
17-03-18 03:02:53.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.394 -07 000000462 INF: FPGA: Recv ZSGSRD 35274
17-03-18 03:02:53.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:53.404 -07 000000444 INF: FPGA: Recv ZSGSRD 35280
17-03-18 03:02:53.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.414 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:53.414 -07 000000629 INF: FPGA: Recv ZPIEZORD 30997
17-03-18 03:02:53.424 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:53.424 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.565 V. Piezo Error = -9.4 V.
17-03-18 03:02:53.424 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.9 um, Read 10 ADC samples: Avg = 35277 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35277 (-166.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35272 (-166.1 uncal um), Max = 35282 (-166.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:02:53.424 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35277, posNoise = 5, negNoise = 5
17-03-18 03:02:53.424 -07 000000610 INF: Z Motor: After move to -0.166940, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:53.424 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:02:53.424 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:53.424 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:53.424 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:53.424 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:53.424 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:53.424 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:53.424 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:53.424 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:53.424 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:53.424 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:53.424 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:53.424 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:53.424 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:02:53.434 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:53.434 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:53.434 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:53.444 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:02:53.444 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:02:53.444 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:02:53.444 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:02:53.454 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36645 150\n [Camera]
17-03-18 03:02:53.644 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:54.054 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:54.054 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:54.054 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:54.054 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:54.054 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:54.054 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:54.054 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:54.054 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:02:54.054 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:54.064 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-18 03:02:54.244 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36645 786
17-03-18 03:02:54.394 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:54.434 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:02:54.434 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:02:54.434 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:54.444 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:02:54.444 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:02:54.444 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:54.444 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:54.444 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:02:54.444 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:54.454 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:02:54.584 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:54.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:54.584 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:54.584 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:54.594 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:54.594 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:54.594 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:54.594 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:54.594 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:02:54.594 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-18 03:02:54.774 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:54.774 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:54.774 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36645 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:02:54.784 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167671
17-03-18 03:02:54.784 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16767 mm
17-03-18 03:02:54.784 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:54.784 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:02:54.784 -07 000000629 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:02:54.784 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:54.784 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 36628, sync = True, waitForSettling = False)
17-03-18 03:02:54.784 -07 000000512 INF: Z Motor: Moving to -0.167672 mm, started at -0.166950 mm, distance = -0.72 um
17-03-18 03:02:54.784 -07 000000561 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:02:54.794 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:54.794 -07 000000629 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:54.794 -07 000000629 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:54.794 -07 000000629 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:02:54.794 -07 000000512 INF: FPGA: Xmit ZDACW 36628\n [Z Motor]
17-03-18 03:02:54.794 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:02:54.804 -07 000000512 INF: FPGA: 'ZDACW 36628' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:02:54.804 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:54.804 -07 000000444 INF: FPGA: Recv ZDACR 36628
17-03-18 03:02:54.814 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:54.814 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:54.814 -07 000000512 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:02:54.964 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:02:54.964 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:02:54.964 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:54.974 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:02:54.974 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:02:54.974 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:54.974 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:54.974 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:02:54.974 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:02:54.984 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:02:55.184 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:02:55.184 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:02:55.234 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:55.234 -07 000000606 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:02:55.244 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:55.244 -07 000000629 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:55.244 -07 000000629 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:02:55.244 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.121 mm/sec
17-03-18 03:02:55.934 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.030322,
17-03-18 03:02:56.194 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:56.194 -07 000000501 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:02:56.204 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:56.204 -07 000000629 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:56.224 -07 000000629 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:56.224 -07 000000629 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:56.224 -07 000000629 INF: Y Motor: Moved to 71.5186 after 1443 ms (table move)
17-03-18 03:02:56.234 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167672 mm (DAC = 36628)
17-03-18 03:02:56.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.234 -07 000000618 INF: FPGA: Recv ZSGSRD 35389
17-03-18 03:02:56.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:56.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.244 -07 000000626 INF: FPGA: Recv ZSGSRD 35386
17-03-18 03:02:56.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.254 -07 000000561 INF: FPGA: Recv ZSGSRD 35396
17-03-18 03:02:56.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.264 -07 000000591 INF: FPGA: Recv ZSGSRD 35393
17-03-18 03:02:56.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.274 -07 000000579 INF: FPGA: Recv ZSGSRD 35388
17-03-18 03:02:56.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.284 -07 000000462 INF: FPGA: Recv ZSGSRD 35396
17-03-18 03:02:56.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.294 -07 000000455 INF: FPGA: Recv ZSGSRD 35389
17-03-18 03:02:56.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.304 -07 000000424 INF: FPGA: Recv ZSGSRD 35387
17-03-18 03:02:56.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.314 -07 000000561 INF: FPGA: Recv ZSGSRD 35388
17-03-18 03:02:56.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.324 -07 000000590 INF: FPGA: Recv ZSGSRD 35392
17-03-18 03:02:56.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.334 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:56.334 -07 000000576 INF: FPGA: Recv ZPIEZORD 31144
17-03-18 03:02:56.344 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.344 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.589 V. Piezo Error = -9.4 V.
17-03-18 03:02:56.344 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.7 um, Read 10 ADC samples: Avg = 35390 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35389 (-166.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35386 (-166.8 uncal um), Max = 35396 (-166.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:02:56.344 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35390, posNoise = 6, negNoise = 4
17-03-18 03:02:56.344 -07 000000610 INF: Z Motor: After move to -0.167672, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:56.344 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 109 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:02:56.344 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:56.394 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:02:56.394 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:56.394 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.167676219708055. ----------
17-03-18 03:02:56.394 -07 000000610 INF: Cycle	107	Tile	15	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:02:56.394 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36451, sync = True, waitForSettling = True)
17-03-18 03:02:56.394 -07 000000610 INF: Z Motor: Moving to -0.166862 mm, started at -0.167676 mm, distance = 0.81 um
17-03-18 03:02:56.394 -07 000000610 INF: FPGA: Xmit ZDACW 36451\n [Z Motor]
17-03-18 03:02:56.394 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:02:56.404 -07 000000610 INF: FPGA: 'ZDACW 36451' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:02:56.404 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:56.404 -07 000000502 INF: FPGA: Recv ZDACR 36451
17-03-18 03:02:56.414 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.414 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:02:56.534 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:02:56.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:02:56.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.564 -07 000000626 INF: FPGA: Recv ZSGSRD 35265
17-03-18 03:02:56.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.574 -07 000000629 INF: FPGA: Recv ZSGSRD 35271
17-03-18 03:02:56.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.584 -07 000000591 INF: FPGA: Recv ZSGSRD 35273
17-03-18 03:02:56.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.594 -07 000000467 INF: FPGA: Recv ZSGSRD 35262
17-03-18 03:02:56.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.604 -07 000000561 INF: FPGA: Recv ZSGSRD 35265
17-03-18 03:02:56.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.614 -07 000000501 INF: FPGA: Recv ZSGSRD 35262
17-03-18 03:02:56.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.624 -07 000000461 INF: FPGA: Recv ZSGSRD 35265
17-03-18 03:02:56.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.634 -07 000000606 INF: FPGA: Recv ZSGSRD 35263
17-03-18 03:02:56.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.644 -07 000000501 INF: FPGA: Recv ZSGSRD 35259
17-03-18 03:02:56.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:02:56.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:56.654 -07 000000430 INF: FPGA: Recv ZSGSRD 35265
17-03-18 03:02:56.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.664 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:56.664 -07 000000561 INF: FPGA: Recv ZPIEZORD 30969
17-03-18 03:02:56.674 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:56.674 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.562 V. Piezo Error = -9.5 V.
17-03-18 03:02:56.674 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.9 um, Read 10 ADC samples: Avg = 35265 (-166.0 uncal um), Error = 0.9 uncal um, Median = 35265 (-166.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35259 (-166.0 uncal um), Max = 35273 (-166.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:02:56.674 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35265, posNoise = 8, negNoise = 6
17-03-18 03:02:56.674 -07 000000610 INF: Z Motor: After move to -0.166862, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:56.674 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:02:56.674 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:56.674 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:56.674 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:56.674 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:56.674 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:02:56.674 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:56.674 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:02:56.674 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:02:56.674 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:56.674 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:02:56.674 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:02:56.674 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:02:56.684 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:02:56.684 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:02:56.684 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:02:56.684 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:02:56.694 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:02:56.694 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:02:56.694 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:02:56.694 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:02:56.704 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36628 150\n [Camera]
17-03-18 03:02:56.904 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:02:57.304 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:02:57.304 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:02:57.304 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:57.304 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:57.304 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-18 03:02:57.304 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:02:57.304 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:02:57.304 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:57.304 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:57.304 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:02:57.494 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36628 786
17-03-18 03:02:57.644 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:02:57.704 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:02:57.704 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:02:57.704 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:57.704 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:02:57.704 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:02:57.704 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:57.704 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:57.704 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:02:57.704 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:02:57.714 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:02:57.834 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:02:57.834 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:02:57.834 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:02:57.834 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:02:57.834 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:02:57.844 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:02:57.844 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:02:57.844 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:02:57.844 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:02:57.844 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:02:58.024 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:02:58.024 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:02:58.024 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36628 150' command took 2 ms to send, 1319 ms to get response, and 1328 ms overall
17-03-18 03:02:58.034 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:02:58.034 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.5185546875, Z-Position -0.166873193190335. ------
17-03-18 03:02:58.034 -07 000000606 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17327 mm
17-03-18 03:02:58.034 -07 000000606 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:02:58.034 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:02:58.034 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:02:58.034 -07 000000512 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm
17-03-18 03:02:58.044 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 37851, sync = True, waitForSettling = False)
17-03-18 03:02:58.044 -07 000000591 INF: Z Motor: Moving to -0.173271 mm, started at -0.166873 mm, distance = -6.40 um
17-03-18 03:02:58.044 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:58.044 -07 000000629 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:02:58.044 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:58.044 -07 000000579 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:02:58.054 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:58.054 -07 000000512 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:58.054 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:02:58.054 -07 000000512 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:02:58.054 -07 000000512 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:02:58.064 -07 000000591 INF: FPGA: Xmit ZDACW 37851\n [Z Motor]
17-03-18 03:02:58.064 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:02:58.074 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:02:58.074 -07 000000591 INF: FPGA: 'ZDACW 37851' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:02:58.084 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:02:58.084 -07 000000561 INF: FPGA: Recv ZDACR 37851
17-03-18 03:02:58.094 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:02:58.094 -07 000000591 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-18 03:02:58.224 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:02:58.224 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:02:58.224 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:02:58.224 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:58.224 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:02:58.224 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:02:58.234 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:58.234 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:02:58.234 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:02:58.244 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:02:58.254 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:02:58.254 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:02:58.444 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:02:58.444 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 393 ms overall
17-03-18 03:02:58.494 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:58.494 -07 000000455 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:02:58.504 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:02:58.504 -07 000000512 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:58.504 -07 000000512 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:02:58.504 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.844 mm, average velocity = 2.148 mm/sec
17-03-18 03:02:59.454 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:02:59.454 -07 000000467 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:02:59.464 -07 000000512 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:02:59.464 -07 000000512 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:02:59.484 -07 000000512 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:02:59.494 -07 000000512 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:02:59.494 -07 000000512 INF: Y Motor: Moved to 72.3496 after 1450 ms (table move)
17-03-18 03:02:59.494 -07 000000606 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173271 mm (DAC = 37851)
17-03-18 03:02:59.494 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.494 -07 000000424 INF: FPGA: Recv ZSGSRD 36259
17-03-18 03:02:59.504 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:02:59.504 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.504 -07 000000455 INF: FPGA: Recv ZSGSRD 36267
17-03-18 03:02:59.514 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.514 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.514 -07 000000444 INF: FPGA: Recv ZSGSRD 36259
17-03-18 03:02:59.524 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.524 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.524 -07 000000501 INF: FPGA: Recv ZSGSRD 36269
17-03-18 03:02:59.534 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.534 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.534 -07 000000430 INF: FPGA: Recv ZSGSRD 36264
17-03-18 03:02:59.544 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.544 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.544 -07 000000561 INF: FPGA: Recv ZSGSRD 36260
17-03-18 03:02:59.554 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.554 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.554 -07 000000576 INF: FPGA: Recv ZSGSRD 36264
17-03-18 03:02:59.564 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.564 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.564 -07 000000461 INF: FPGA: Recv ZSGSRD 36262
17-03-18 03:02:59.574 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.574 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.574 -07 000000626 INF: FPGA: Recv ZSGSRD 36259
17-03-18 03:02:59.584 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.584 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:02:59.584 -07 000000502 INF: FPGA: Recv ZSGSRD 36266
17-03-18 03:02:59.594 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.594 -07 000000606 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:02:59.594 -07 000000591 INF: FPGA: Recv ZPIEZORD 32333
17-03-18 03:02:59.604 -07 000000606 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:02:59.604 -07 000000606 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.776 V. Piezo Error = -8.7 V.
17-03-18 03:02:59.604 -07 000000606 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.3 um, Read 10 ADC samples: Avg = 36263 (-172.4 uncal um), Error = 0.9 uncal um, Median = 36263 (-172.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36259 (-172.4 uncal um), Max = 36269 (-172.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:02:59.604 -07 000000606 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36263, posNoise = 6, negNoise = 4
17-03-18 03:02:59.604 -07 000000606 INF: Z Motor: After move to -0.173271, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:02:59.604 -07 000000606 INF: Z Motor: Settle wait time = 1453 ms, measure time = 107 ms (allowed 150 ms), total time = 1560 ms
17-03-18 03:02:59.604 -07 000000606 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:02:59.654 -07 000000606 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:02:59.654 -07 000000606 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:02:59.654 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:02:59.654 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:02:59.654 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:02:59.654 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:02:59.654 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:02:59.654 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:02:59.654 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:02:59.654 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:02:59.664 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:02:59.664 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:02:59.664 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-18 03:02:59.664 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-18 03:02:59.674 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:02:59.714 -07 000000455 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:03:00.014 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:03:00.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:03:00.014 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:03:00.134 -07 000000455 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:03:00.134 -07 000000455 INF: FPGA: Recv CAMSNAP
17-03-18 03:03:00.134 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start.
17-03-18 03:03:00.134 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 457 ms to get response, and 466 ms overall
17-03-18 03:03:00.264 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 124 ms.
17-03-18 03:03:00.264 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:00.264 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:03:00.264 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 246 ms.
17-03-18 03:03:00.334 -07 000000579 INF: Autofocus start
17-03-18 03:03:00.334 -07 000000579 INF: MeasureProfile start
17-03-18 03:03:00.334 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:00.334 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:00.344 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 4 ms to get response, and 10 ms overall
17-03-18 03:03:00.344 -07 000000461 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:03:00.344 -07 000000579 INF: MeasureProfile done
17-03-18 03:03:00.344 -07 000000579 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:03:00.344 -07 000000579 INF: Autofocus finished
17-03-18 03:03:00.544 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:03:00.544 -07 000000461 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 198 ms to get response, and 202 ms overall
17-03-18 03:03:00.554 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.173284556907813. ----------
17-03-18 03:03:00.554 -07 000000610 INF: Cycle	107	Tile	16	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:00.554 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36366, sync = True, waitForSettling = True)
17-03-18 03:03:00.554 -07 000000610 INF: Z Motor: Moving to -0.166473 mm, started at -0.173285 mm, distance = 6.81 um
17-03-18 03:03:00.554 -07 000000610 INF: FPGA: Xmit ZDACW 36366\n [Z Motor]
17-03-18 03:03:00.554 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:03:00.564 -07 000000610 INF: FPGA: 'ZDACW 36366' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:03:00.564 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:00.564 -07 000000579 INF: FPGA: Recv ZDACR 36366
17-03-18 03:03:00.574 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.574 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:00.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.724 -07 000000618 INF: FPGA: Recv ZSGSRD 35208
17-03-18 03:03:00.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.734 -07 000000591 INF: FPGA: Recv ZSGSRD 35206
17-03-18 03:03:00.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.764 -07 000000424 INF: FPGA: Recv ZSGSRD 35206
17-03-18 03:03:00.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:00.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.784 -07 000000502 INF: FPGA: Recv ZSGSRD 35204
17-03-18 03:03:00.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:00.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.794 -07 000000424 INF: FPGA: Recv ZSGSRD 35204
17-03-18 03:03:00.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.804 -07 000000444 INF: FPGA: Recv ZSGSRD 35203
17-03-18 03:03:00.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.814 -07 000000462 INF: FPGA: Recv ZSGSRD 35202
17-03-18 03:03:00.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.824 -07 000000569 INF: FPGA: Recv ZSGSRD 35203
17-03-18 03:03:00.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.834 -07 000000467 INF: FPGA: Recv ZSGSRD 35206
17-03-18 03:03:00.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:00.844 -07 000000626 INF: FPGA: Recv ZSGSRD 35200
17-03-18 03:03:00.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.854 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:00.854 -07 000000502 INF: FPGA: Recv ZPIEZORD 30924
17-03-18 03:03:00.864 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:00.864 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.549 V. Piezo Error = -9.4 V.
17-03-18 03:03:00.864 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.5 um, Read 10 ADC samples: Avg = 35204 (-165.6 uncal um), Error = 0.9 uncal um, Median = 35204 (-165.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35200 (-165.6 uncal um), Max = 35208 (-165.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:03:00.864 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35204, posNoise = 4, negNoise = 4
17-03-18 03:03:00.864 -07 000000610 INF: Z Motor: After move to -0.166473, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:00.864 -07 000000610 INF: Z Motor: MoveAbsStepped took 303 ms)
17-03-18 03:03:00.864 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:00.864 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:00.864 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:00.864 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:00.864 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:00.864 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:00.864 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:00.864 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:00.864 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:00.864 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:03:00.864 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:00.864 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:00.874 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:00.874 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:00.874 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:00.874 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:00.884 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:03:00.884 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:03:00.884 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:03:00.884 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:03:00.884 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36542 150\n [Camera]
17-03-18 03:03:01.084 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:01.294 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.027603,
17-03-18 03:03:01.484 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:01.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:01.494 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:01.494 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:01.494 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:01.494 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:01.494 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:01.494 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:03:01.494 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:01.494 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-18 03:03:01.534 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:01.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:01.684 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36542 786
17-03-18 03:03:01.834 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:01.874 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:03:01.874 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:03:01.874 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:01.874 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:01.874 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:03:01.874 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:01.884 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:01.884 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:03:01.884 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:03:01.894 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:03:02.024 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:02.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:02.024 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:02.024 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:02.024 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:02.024 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:02.034 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:02.034 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:03:02.144 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:02.144 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:03:02.214 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:02.214 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:02.214 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36542 150' command took 2 ms to send, 1317 ms to get response, and 1328 ms overall
17-03-18 03:03:02.214 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.166979
17-03-18 03:03:02.224 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16698 mm
17-03-18 03:03:02.224 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:02.224 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:03:02.224 -07 000000462 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:03:02.224 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:02.224 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36477, sync = True, waitForSettling = False)
17-03-18 03:03:02.224 -07 000000606 INF: Z Motor: Moving to -0.166981 mm, started at -0.166481 mm, distance = -0.50 um
17-03-18 03:03:02.224 -07 000000502 INF: FPGA: Recv YRDPOS 148173
17-03-18 03:03:02.234 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:02.234 -07 000000462 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:02.234 -07 000000606 INF: FPGA: Xmit ZDACW 36477\n [Z Motor]
17-03-18 03:03:02.234 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:03:02.244 -07 000000606 INF: FPGA: 'ZDACW 36477' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:03:02.244 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:02.244 -07 000000462 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:02.244 -07 000000462 INF: Y Motor: Moving 1348 steps-27
17-03-18 03:03:02.244 -07 000000502 INF: FPGA: Recv ZDACR 36477
17-03-18 03:03:02.254 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:02.254 -07 000000606 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:03:02.254 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:02.404 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:03:02.404 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:03:02.404 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:02.404 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:02.414 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:03:02.524 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:03:02.524 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:03:02.524 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:02.524 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:02.524 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms.
17-03-18 03:03:02.624 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:03:02.624 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:03:02.674 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:02.674 -07 000000430 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:03:02.684 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:02.684 -07 000000462 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:02.684 -07 000000462 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:03:02.684 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.843 mm, average velocity = 2.178 mm/sec
17-03-18 03:03:03.634 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:03.634 -07 000000444 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:03:03.644 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:03.644 -07 000000462 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:03.664 -07 000000462 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:03.664 -07 000000462 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:03.664 -07 000000462 INF: Y Motor: Moved to 73.1763 after 1444 ms (table move)
17-03-18 03:03:03.674 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166981 mm (DAC = 36477)
17-03-18 03:03:03.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.674 -07 000000626 INF: FPGA: Recv ZSGSRD 35285
17-03-18 03:03:03.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:03.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.684 -07 000000501 INF: FPGA: Recv ZSGSRD 35285
17-03-18 03:03:03.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.694 -07 000000606 INF: FPGA: Recv ZSGSRD 35288
17-03-18 03:03:03.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.704 -07 000000569 INF: FPGA: Recv ZSGSRD 35292
17-03-18 03:03:03.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.714 -07 000000590 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:03:03.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.724 -07 000000579 INF: FPGA: Recv ZSGSRD 35289
17-03-18 03:03:03.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.734 -07 000000591 INF: FPGA: Recv ZSGSRD 35277
17-03-18 03:03:03.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.744 -07 000000606 INF: FPGA: Recv ZSGSRD 35276
17-03-18 03:03:03.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.754 -07 000000569 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:03:03.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:03.764 -07 000000424 INF: FPGA: Recv ZSGSRD 35292
17-03-18 03:03:03.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.774 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:03.774 -07 000000444 INF: FPGA: Recv ZPIEZORD 30997
17-03-18 03:03:03.784 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.784 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.566 V. Piezo Error = -9.4 V.
17-03-18 03:03:03.784 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35285 (-166.1 uncal um), Error = 0.8 uncal um, Median = 35285 (-166.1 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35276 (-166.1 uncal um), Max = 35292 (-166.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:03:03.784 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35285, posNoise = 7, negNoise = 9
17-03-18 03:03:03.784 -07 000000610 INF: Z Motor: After move to -0.166981, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:03.784 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:03:03.784 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:03.834 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-18 03:03:03.834 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:03.834 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.16700167743317. ----------
17-03-18 03:03:03.834 -07 000000610 INF: Cycle	107	Tile	17	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:03.834 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36300, sync = True, waitForSettling = True)
17-03-18 03:03:03.834 -07 000000610 INF: Z Motor: Moving to -0.166171 mm, started at -0.167002 mm, distance = 0.83 um
17-03-18 03:03:03.834 -07 000000610 INF: FPGA: Xmit ZDACW 36300\n [Z Motor]
17-03-18 03:03:03.834 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:03:03.844 -07 000000610 INF: FPGA: 'ZDACW 36300' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:03.844 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:03.844 -07 000000591 INF: FPGA: Recv ZDACR 36300
17-03-18 03:03:03.854 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:03.854 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:04.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.004 -07 000000455 INF: FPGA: Recv ZSGSRD 35162
17-03-18 03:03:04.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:04.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.014 -07 000000576 INF: FPGA: Recv ZSGSRD 35159
17-03-18 03:03:04.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.024 -07 000000430 INF: FPGA: Recv ZSGSRD 35160
17-03-18 03:03:04.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.034 -07 000000462 INF: FPGA: Recv ZSGSRD 35157
17-03-18 03:03:04.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.044 -07 000000501 INF: FPGA: Recv ZSGSRD 35154
17-03-18 03:03:04.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.054 -07 000000444 INF: FPGA: Recv ZSGSRD 35157
17-03-18 03:03:04.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.064 -07 000000576 INF: FPGA: Recv ZSGSRD 35156
17-03-18 03:03:04.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.074 -07 000000430 INF: FPGA: Recv ZSGSRD 35158
17-03-18 03:03:04.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.084 -07 000000424 INF: FPGA: Recv ZSGSRD 35160
17-03-18 03:03:04.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:04.094 -07 000000561 INF: FPGA: Recv ZSGSRD 35156
17-03-18 03:03:04.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:04.104 -07 000000455 INF: FPGA: Recv ZPIEZORD 30861
17-03-18 03:03:04.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:04.114 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.539 V. Piezo Error = -9.5 V.
17-03-18 03:03:04.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.2 um, Read 10 ADC samples: Avg = 35158 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35158 (-165.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35154 (-165.3 uncal um), Max = 35162 (-165.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:03:04.114 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35158, posNoise = 4, negNoise = 4
17-03-18 03:03:04.114 -07 000000610 INF: Z Motor: After move to -0.166171, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:04.114 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:04.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:04.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:04.114 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:04.114 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:04.114 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:04.114 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:04.114 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:04.114 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:04.114 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:04.114 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:04.114 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:03:04.114 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:04.124 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:03:04.124 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:04.124 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:03:04.124 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:04.134 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:03:04.134 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:03:04.134 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:03:04.134 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:04.134 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36477 150\n [Camera]
17-03-18 03:03:04.334 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:04.734 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:04.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:04.744 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:04.744 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:04.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:04.744 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:04.744 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:04.744 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:03:04.744 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:04.744 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:03:04.934 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36477 786
17-03-18 03:03:05.084 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:05.114 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:03:05.114 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:03:05.114 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:05.114 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:03:05.114 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:03:05.114 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:05.124 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:05.124 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:03:05.124 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:05.134 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:03:05.274 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1131
17-03-18 03:03:05.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1131
17-03-18 03:03:05.274 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:05.274 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:05.274 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-18 03:03:05.284 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1131
17-03-18 03:03:05.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1131
17-03-18 03:03:05.284 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:05.284 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:05.284 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-18 03:03:05.464 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:05.464 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:05.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36477 150' command took 2 ms to send, 1317 ms to get response, and 1328 ms overall
17-03-18 03:03:05.464 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166608
17-03-18 03:03:05.474 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16661 mm
17-03-18 03:03:05.474 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:05.474 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:03:05.474 -07 000000590 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:03:05.474 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:05.474 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 36396, sync = True, waitForSettling = False)
17-03-18 03:03:05.474 -07 000000462 INF: Z Motor: Moving to -0.166610 mm, started at -0.166186 mm, distance = -0.42 um
17-03-18 03:03:05.474 -07 000000591 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:03:05.484 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:05.484 -07 000000590 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:05.484 -07 000000590 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:05.484 -07 000000590 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:03:05.484 -07 000000462 INF: FPGA: Xmit ZDACW 36396\n [Z Motor]
17-03-18 03:03:05.484 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:03:05.494 -07 000000462 INF: FPGA: 'ZDACW 36396' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:03:05.494 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:05.494 -07 000000424 INF: FPGA: Recv ZDACR 36396
17-03-18 03:03:05.504 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:05.504 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:05.504 -07 000000462 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:03:05.664 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:03:05.664 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:03:05.664 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:05.674 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 03:03:05.674 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:03:05.674 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:05.674 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:05.674 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:03:05.674 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:05.684 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:03:05.874 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:03:05.874 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:03:05.924 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:05.934 -07 000000561 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:03:05.934 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:03:05.934 -07 000000590 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:05.934 -07 000000590 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:03:05.934 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.846 mm, average velocity = 2.126 mm/sec
17-03-18 03:03:06.534 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:06.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:06.654 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.009895,
17-03-18 03:03:06.884 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:06.884 -07 000000502 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:03:06.894 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:06.894 -07 000000590 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:06.914 -07 000000590 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:06.914 -07 000000590 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:03:06.914 -07 000000590 INF: Y Motor: Moved to 74.0083 after 1438 ms (table move)
17-03-18 03:03:06.914 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166610 mm (DAC = 36396)
17-03-18 03:03:06.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.924 -07 000000430 INF: FPGA: Recv ZSGSRD 35228
17-03-18 03:03:06.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:03:06.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.924 -07 000000444 INF: FPGA: Recv ZSGSRD 35226
17-03-18 03:03:06.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:06.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.934 -07 000000424 INF: FPGA: Recv ZSGSRD 35228
17-03-18 03:03:06.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:06.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.944 -07 000000579 INF: FPGA: Recv ZSGSRD 35225
17-03-18 03:03:06.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:06.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.954 -07 000000430 INF: FPGA: Recv ZSGSRD 35228
17-03-18 03:03:06.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:06.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.964 -07 000000576 INF: FPGA: Recv ZSGSRD 35230
17-03-18 03:03:06.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:06.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.974 -07 000000512 INF: FPGA: Recv ZSGSRD 35224
17-03-18 03:03:06.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:06.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.984 -07 000000569 INF: FPGA: Recv ZSGSRD 35218
17-03-18 03:03:06.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:06.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:06.994 -07 000000618 INF: FPGA: Recv ZSGSRD 35224
17-03-18 03:03:07.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.004 -07 000000561 INF: FPGA: Recv ZSGSRD 35228
17-03-18 03:03:07.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.014 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:07.014 -07 000000502 INF: FPGA: Recv ZPIEZORD 30961
17-03-18 03:03:07.024 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.024 -07 000000610 INF: Z Motor: Piezo is near 46.1 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.554 V. Piezo Error = -9.4 V.
17-03-18 03:03:07.024 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35226 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35227 (-165.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35218 (-165.7 uncal um), Max = 35230 (-165.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:07.024 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35226, posNoise = 4, negNoise = 8
17-03-18 03:03:07.024 -07 000000610 INF: Z Motor: After move to -0.166610, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:07.024 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 107 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:03:07.024 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:07.074 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-18 03:03:07.074 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:07.074 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.166622648916806. ----------
17-03-18 03:03:07.074 -07 000000610 INF: Cycle	107	Tile	18	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:07.074 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36219, sync = True, waitForSettling = True)
17-03-18 03:03:07.074 -07 000000610 INF: Z Motor: Moving to -0.165800 mm, started at -0.166623 mm, distance = 0.82 um
17-03-18 03:03:07.074 -07 000000610 INF: FPGA: Xmit ZDACW 36219\n [Z Motor]
17-03-18 03:03:07.074 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:03:07.084 -07 000000610 INF: FPGA: 'ZDACW 36219' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:07.084 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:07.084 -07 000000606 INF: FPGA: Recv ZDACR 36219
17-03-18 03:03:07.094 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.094 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:07.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.244 -07 000000591 INF: FPGA: Recv ZSGSRD 35099
17-03-18 03:03:07.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.254 -07 000000512 INF: FPGA: Recv ZSGSRD 35106
17-03-18 03:03:07.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.264 -07 000000590 INF: FPGA: Recv ZSGSRD 35091
17-03-18 03:03:07.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.274 -07 000000462 INF: FPGA: Recv ZSGSRD 35091
17-03-18 03:03:07.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.284 -07 000000430 INF: FPGA: Recv ZSGSRD 35102
17-03-18 03:03:07.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.294 -07 000000591 INF: FPGA: Recv ZSGSRD 35104
17-03-18 03:03:07.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.304 -07 000000629 INF: FPGA: Recv ZSGSRD 35103
17-03-18 03:03:07.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.314 -07 000000569 INF: FPGA: Recv ZSGSRD 35089
17-03-18 03:03:07.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.324 -07 000000501 INF: FPGA: Recv ZSGSRD 35103
17-03-18 03:03:07.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:07.334 -07 000000424 INF: FPGA: Recv ZSGSRD 35094
17-03-18 03:03:07.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.344 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:07.344 -07 000000606 INF: FPGA: Recv ZPIEZORD 30809
17-03-18 03:03:07.354 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:07.354 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.527 V. Piezo Error = -9.5 V.
17-03-18 03:03:07.354 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35098 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35100 (-164.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35089 (-164.9 uncal um), Max = 35106 (-165.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:03:07.354 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35098, posNoise = 8, negNoise = 9
17-03-18 03:03:07.354 -07 000000610 INF: Z Motor: After move to -0.165800, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:07.354 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:03:07.354 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:07.354 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:07.354 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:07.354 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:07.354 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:07.354 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:07.354 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:07.354 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:07.354 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:07.354 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:07.354 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:07.354 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:07.354 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:03:07.354 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:07.364 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:03:07.364 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:07.374 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:03:07.374 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 03:03:07.374 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:03:07.374 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:03:07.374 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36396 150\n [Camera]
17-03-18 03:03:07.574 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 03:03:07.974 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:07.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:07.974 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:07.974 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:07.974 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:03:07.984 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:03:07.984 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:03:07.984 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:07.984 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:07.984 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:03:08.174 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36396 786
17-03-18 03:03:08.324 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:08.354 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:03:08.354 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:03:08.354 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:08.354 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:03:08.354 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:03:08.354 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:08.364 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:08.364 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:03:08.364 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:08.374 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:03:08.514 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:08.514 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:08.514 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:08.514 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:08.514 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:03:08.514 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:08.514 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:08.514 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:08.514 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:08.514 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:03:08.704 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:08.704 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:08.704 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36396 150' command took 2 ms to send, 1326 ms to get response, and 1328 ms overall
17-03-18 03:03:08.704 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165642
17-03-18 03:03:08.704 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16564 mm
17-03-18 03:03:08.704 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:08.714 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:03:08.714 -07 000000430 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:03:08.714 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:08.714 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 36184, sync = True, waitForSettling = False)
17-03-18 03:03:08.714 -07 000000561 INF: Z Motor: Moving to -0.165640 mm, started at -0.165800 mm, distance = 0.16 um
17-03-18 03:03:08.714 -07 000000606 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:03:08.724 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:08.724 -07 000000561 INF: FPGA: Xmit ZDACW 36184\n [Z Motor]
17-03-18 03:03:08.724 -07 000000430 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:08.724 -07 000000430 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:08.724 -07 000000430 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:03:08.724 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:03:08.734 -07 000000561 INF: FPGA: 'ZDACW 36184' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:03:08.734 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:08.734 -07 000000455 INF: FPGA: Recv ZDACR 36184
17-03-18 03:03:08.744 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:08.744 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:08.744 -07 000000561 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 03:03:08.894 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:03:08.894 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:03:08.894 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:08.894 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:08.894 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:03:08.894 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:08.894 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:08.894 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:03:08.904 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:08.904 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:03:09.114 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:03:09.114 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:03:09.144 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:09.154 -07 000000501 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:03:09.154 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:03:09.154 -07 000000430 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:09.154 -07 000000430 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:03:09.154 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.127 mm/sec
17-03-18 03:03:10.104 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:10.104 -07 000000467 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:03:10.114 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:10.114 -07 000000430 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:10.124 -07 000000430 INF: Y Motor: After move to 74.852608, error = -0.021065, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:10.124 -07 000000430 INF: Y Motor: Position error after settling (table move) = -43 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:10.124 -07 000000430 INF: Y Motor: Moved to 74.8315 after 1418 ms (table move)
17-03-18 03:03:10.134 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165640 mm (DAC = 36184)
17-03-18 03:03:10.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.134 -07 000000629 INF: FPGA: Recv ZSGSRD 35079
17-03-18 03:03:10.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:10.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.144 -07 000000591 INF: FPGA: Recv ZSGSRD 35071
17-03-18 03:03:10.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.154 -07 000000444 INF: FPGA: Recv ZSGSRD 35068
17-03-18 03:03:10.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.164 -07 000000502 INF: FPGA: Recv ZSGSRD 35070
17-03-18 03:03:10.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.174 -07 000000590 INF: FPGA: Recv ZSGSRD 35074
17-03-18 03:03:10.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.184 -07 000000629 INF: FPGA: Recv ZSGSRD 35074
17-03-18 03:03:10.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.194 -07 000000590 INF: FPGA: Recv ZSGSRD 35080
17-03-18 03:03:10.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.204 -07 000000444 INF: FPGA: Recv ZSGSRD 35081
17-03-18 03:03:10.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.214 -07 000000561 INF: FPGA: Recv ZSGSRD 35075
17-03-18 03:03:10.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.224 -07 000000576 INF: FPGA: Recv ZSGSRD 35070
17-03-18 03:03:10.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.234 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:10.234 -07 000000629 INF: FPGA: Recv ZPIEZORD 30792
17-03-18 03:03:10.244 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.244 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.521 V. Piezo Error = -9.4 V.
17-03-18 03:03:10.244 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.6 um, Read 10 ADC samples: Avg = 35074 (-164.8 uncal um), Error = 0.9 uncal um, Median = 35074 (-164.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35068 (-164.7 uncal um), Max = 35081 (-164.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:10.244 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35074, posNoise = 7, negNoise = 6
17-03-18 03:03:10.244 -07 000000610 INF: Z Motor: After move to -0.165640, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:10.244 -07 000000610 INF: Z Motor: Settle wait time = 1420 ms, measure time = 109 ms (allowed 150 ms), total time = 1529 ms
17-03-18 03:03:10.244 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:10.294 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms
17-03-18 03:03:10.294 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:10.294 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83154296875, Z-position -0.165646168671259. ----------
17-03-18 03:03:10.294 -07 000000610 INF: Cycle	107	Tile	19	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:10.294 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36008, sync = True, waitForSettling = True)
17-03-18 03:03:10.294 -07 000000610 INF: Z Motor: Moving to -0.164834 mm, started at -0.165646 mm, distance = 0.81 um
17-03-18 03:03:10.294 -07 000000610 INF: FPGA: Xmit ZDACW 36008\n [Z Motor]
17-03-18 03:03:10.304 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:03:10.304 -07 000000610 INF: FPGA: 'ZDACW 36008' command took 0 ms to send, 1 ms to get response, and 6 ms overall
17-03-18 03:03:10.304 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:10.304 -07 000000626 INF: FPGA: Recv ZDACR 36008
17-03-18 03:03:10.314 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:10.314 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:10.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.464 -07 000000462 INF: FPGA: Recv ZSGSRD 34943
17-03-18 03:03:10.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:10.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.474 -07 000000626 INF: FPGA: Recv ZSGSRD 34951
17-03-18 03:03:10.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.484 -07 000000579 INF: FPGA: Recv ZSGSRD 34942
17-03-18 03:03:10.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.494 -07 000000576 INF: FPGA: Recv ZSGSRD 34947
17-03-18 03:03:10.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.504 -07 000000561 INF: FPGA: Recv ZSGSRD 34955
17-03-18 03:03:10.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.514 -07 000000502 INF: FPGA: Recv ZSGSRD 34947
17-03-18 03:03:10.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.524 -07 000000461 INF: FPGA: Recv ZSGSRD 34953
17-03-18 03:03:10.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.534 -07 000000424 INF: FPGA: Recv ZSGSRD 34948
17-03-18 03:03:10.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.544 -07 000000606 INF: FPGA: Recv ZSGSRD 34945
17-03-18 03:03:10.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:10.554 -07 000000467 INF: FPGA: Recv ZSGSRD 34949
17-03-18 03:03:10.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:10.564 -07 000000618 INF: FPGA: Recv ZPIEZORD 30597
17-03-18 03:03:10.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:10.574 -07 000000610 INF: Z Motor: Piezo is near 45.4 V (nominally 0 to 100 V), expect near 54.9 V, since DAC is at 5.494 V. Piezo Error = -9.6 V.
17-03-18 03:03:10.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.8 um, Read 10 ADC samples: Avg = 34948 (-164.0 uncal um), Error = 0.9 uncal um, Median = 34948 (-164.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 34942 (-163.9 uncal um), Max = 34955 (-164.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:10.574 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34948, posNoise = 7, negNoise = 6
17-03-18 03:03:10.574 -07 000000610 INF: Z Motor: After move to -0.164834, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:10.574 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:10.574 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:10.574 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:10.574 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:10.574 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:10.574 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:10.574 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:10.574 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:10.574 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:10.574 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:03:10.574 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:10.574 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:10.574 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:10.574 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:10.574 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:10.574 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:03:10.574 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:10.594 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-18 03:03:10.594 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:10.594 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 03:03:10.594 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:10.594 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 36184 150\n [Camera]
17-03-18 03:03:10.804 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:11.204 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:11.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:11.204 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:11.204 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:11.204 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:03:11.204 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:11.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:11.204 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:11.204 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:11.204 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:03:11.394 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36184 786
17-03-18 03:03:11.534 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:11.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:11.544 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:11.594 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:03:11.594 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:03:11.594 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:11.594 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 03:03:11.594 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:03:11.594 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:11.594 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:11.594 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:03:11.604 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:11.604 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:03:11.734 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:11.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:11.734 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:11.734 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:11.734 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:03:11.734 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:11.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:11.744 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:11.744 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:11.744 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:03:11.924 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:11.924 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:11.924 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 36184 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:03:12.014 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.99219,
17-03-18 03:03:12.114 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:03:12.114 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:03:12.114 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:12.114 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:12.114 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:03:12.114 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:12.124 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:12.124 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:03:12.124 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:03:12.124 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:12.134 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:03:12.164 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:03:12.164 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:03:12.204 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:03:12.204 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:03:12.214 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:03:12.214 -07 000000430 INF: FPGA: Recv EMCUR 
17-03-18 03:03:12.224 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:12.224 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:03:12.724 -07 000000467 INF: FPGA: Recv EMIN
17-03-18 03:03:12.724 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 03:03:12.724 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:03:12.724 -07 000000561 INF: FPGA: Recv EMCUR 
17-03-18 03:03:12.734 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:12.734 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:03:12.734 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83154296875, Z-Position -0.164836717941397. ------
17-03-18 03:03:12.734 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13940 mm
17-03-18 03:03:12.734 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:12.734 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:12.744 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:03:12.744 -07 000000467 INF: Y Motor: Moving to 59.9126 mm, started at 74.8315 mm, delta = -14.9189 mm
17-03-18 03:03:12.744 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:12.744 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:12.744 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:12.744 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 30452, sync = True, waitForSettling = False)
17-03-18 03:03:12.744 -07 000000455 INF: Z Motor: Moving to -0.139400 mm, started at -0.164837 mm, distance = 25.44 um
17-03-18 03:03:12.744 -07 000000569 INF: FPGA: Recv YRDPOS 153257
17-03-18 03:03:12.754 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:12.754 -07 000000467 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:12.754 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:03:12.754 -07 000000467 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:03:12.754 -07 000000467 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:03:12.764 -07 000000455 INF: FPGA: Xmit ZDACW 30452\n [Z Motor]
17-03-18 03:03:12.764 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:03:12.774 -07 000000455 INF: FPGA: 'ZDACW 30452' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:03:12.774 -07 000000467 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:03:12.784 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:12.784 -07 000000576 INF: FPGA: Recv ZDACR 30452
17-03-18 03:03:12.794 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:12.794 -07 000000455 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:03:12.954 -07 000000606 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:03:12.954 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:03:14.394 -07 000000502 INF: FPGA: Recv YMVTO 122703 23904
17-03-18 03:03:14.394 -07 000000467 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1642 ms overall
17-03-18 03:03:14.394 -07 000000467 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:03:14.394 -07 000000467 INF: Y Motor: To move from 74.833 to 59.913 (-14.919 mm) should take 23872 steps, but required 23904 steps (14.940 mm). Slippage = 0.020 mm (0.00%).
17-03-18 03:03:14.394 -07 000000467 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1643 ms, distance = 14.919 mm, average velocity = 9.080 mm/sec
17-03-18 03:03:16.534 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:16.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:17.244 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:17.244 -07 000000455 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:03:17.254 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:17.254 -07 000000467 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:17.284 -07 000000467 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:17.284 -07 000000467 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:03:17.284 -07 000000467 INF: Y Motor: Moved to 59.9106 after 4548 ms
17-03-18 03:03:17.294 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139400 mm (DAC = 30452)
17-03-18 03:03:17.294 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.294 -07 000000512 INF: FPGA: Recv ZSGSRD 30984
17-03-18 03:03:17.304 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:17.304 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.304 -07 000000591 INF: FPGA: Recv ZSGSRD 30986
17-03-18 03:03:17.314 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.314 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.314 -07 000000501 INF: FPGA: Recv ZSGSRD 30993
17-03-18 03:03:17.324 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.324 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.324 -07 000000618 INF: FPGA: Recv ZSGSRD 30987
17-03-18 03:03:17.334 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.334 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.334 -07 000000569 INF: FPGA: Recv ZSGSRD 30986
17-03-18 03:03:17.344 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.344 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.344 -07 000000561 INF: FPGA: Recv ZSGSRD 30990
17-03-18 03:03:17.354 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.354 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.354 -07 000000591 INF: FPGA: Recv ZSGSRD 30994
17-03-18 03:03:17.364 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.374 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.374 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.977204,
17-03-18 03:03:17.374 -07 000000444 INF: FPGA: Recv ZSGSRD 30987
17-03-18 03:03:17.384 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:17.404 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.404 -07 000000590 INF: FPGA: Recv ZSGSRD 30988
17-03-18 03:03:17.414 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:17.424 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:17.424 -07 000000591 INF: FPGA: Recv ZSGSRD 30990
17-03-18 03:03:17.434 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:17.434 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:17.434 -07 000000462 INF: FPGA: Recv ZPIEZORD 26483
17-03-18 03:03:17.444 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:17.444 -07 000000430 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.647 V. Piezo Error = -9.9 V.
17-03-18 03:03:17.444 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.4 um, Read 10 ADC samples: Avg = 30988 (-138.6 uncal um), Error = 0.8 uncal um, Median = 30988 (-138.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30984 (-138.6 uncal um), Max = 30994 (-138.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:03:17.444 -07 000000430 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30988, posNoise = 6, negNoise = 4
17-03-18 03:03:17.444 -07 000000430 INF: Z Motor: After move to -0.139400, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:17.444 -07 000000430 INF: Z Motor: Settle wait time = 4550 ms, measure time = 149 ms (allowed 150 ms), total time = 4699 ms
17-03-18 03:03:17.444 -07 000000430 INF: Z Motor: Waiting extra 1 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:17.454 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4712 ms
17-03-18 03:03:17.454 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:17.454 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:17.454 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:17.454 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:17.454 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:17.454 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:03:17.454 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:17.454 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:17.454 -07 000000579 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:03:17.484 -07 000000579 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 24 ms.
17-03-18 03:03:17.484 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:03:17.484 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:03:17.484 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:03:17.494 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:03:17.494 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 03:03:17.504 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:03:17.544 -07 000000455 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:03:17.844 -07 000000591 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:03:17.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:03:17.844 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:03:17.854 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) start.
17-03-18 03:03:17.884 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:03:17.884 -07 000000444 INF: FPGA: Recv CAMSNAP
17-03-18 03:03:17.884 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 03:03:17.964 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) end. Duration was 117 ms.
17-03-18 03:03:17.964 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:17.974 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 03:03:17.974 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 121 ms.
17-03-18 03:03:17.984 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:17.984 -07 000000590 INF: Image SNR check: start
17-03-18 03:03:17.984 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:17.994 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:17.994 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:03:17.994 -07 000000590 INF: Image SNR check: pass  [peak (Max-Min)=127.47]
17-03-18 03:03:17.994 -07 000000590 INF: Autofocus start
17-03-18 03:03:17.994 -07 000000590 INF: MeasureProfile start
17-03-18 03:03:18.014 -07 000000590 INF: MeasureProfile done
17-03-18 03:03:18.014 -07 000000590 INF: X=32  Z correction [um]=0.1299841
17-03-18 03:03:18.014 -07 000000590 INF: Autofocus finished
17-03-18 03:03:18.194 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:03:18.194 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:03:18.194 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139396837860024. ----------
17-03-18 03:03:18.194 -07 000000610 INF: Cycle	107	Tile	1	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:18.204 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28993, sync = True, waitForSettling = True)
17-03-18 03:03:18.204 -07 000000610 INF: Z Motor: Moving to -0.132721 mm, started at -0.139397 mm, distance = 6.68 um
17-03-18 03:03:18.204 -07 000000610 INF: FPGA: Xmit ZDACW 28993\n [Z Motor]
17-03-18 03:03:18.204 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:03:18.214 -07 000000610 INF: FPGA: 'ZDACW 28993' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.214 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:18.214 -07 000000467 INF: FPGA: Recv ZDACR 28993
17-03-18 03:03:18.224 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.224 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:18.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.374 -07 000000561 INF: FPGA: Recv ZSGSRD 29956
17-03-18 03:03:18.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:18.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.384 -07 000000462 INF: FPGA: Recv ZSGSRD 29952
17-03-18 03:03:18.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.394 -07 000000579 INF: FPGA: Recv ZSGSRD 29947
17-03-18 03:03:18.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.404 -07 000000591 INF: FPGA: Recv ZSGSRD 29944
17-03-18 03:03:18.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.414 -07 000000444 INF: FPGA: Recv ZSGSRD 29951
17-03-18 03:03:18.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.424 -07 000000561 INF: FPGA: Recv ZSGSRD 29950
17-03-18 03:03:18.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.434 -07 000000606 INF: FPGA: Recv ZSGSRD 29952
17-03-18 03:03:18.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.444 -07 000000467 INF: FPGA: Recv ZSGSRD 29948
17-03-18 03:03:18.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.454 -07 000000590 INF: FPGA: Recv ZSGSRD 29951
17-03-18 03:03:18.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:18.464 -07 000000626 INF: FPGA: Recv ZSGSRD 29947
17-03-18 03:03:18.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:18.474 -07 000000591 INF: FPGA: Recv ZPIEZORD 25353
17-03-18 03:03:18.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:18.484 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.424 V. Piezo Error = -10.1 V.
17-03-18 03:03:18.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29950 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29950 (-131.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29944 (-131.9 uncal um), Max = 29956 (-132.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:18.484 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29950, posNoise = 6, negNoise = 6
17-03-18 03:03:18.484 -07 000000610 INF: Z Motor: After move to -0.132721, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:18.484 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:03:18.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:18.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:18.484 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:18.484 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:18.484 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:18.484 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:18.484 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:18.484 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:18.484 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:18.484 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:18.484 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:18.484 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:03:18.484 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:18.494 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:18.504 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:03:18.504 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:03:18.504 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:03:18.504 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:18.504 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:03:18.504 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:18.514 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:03:18.514 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-18 03:03:18.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 29169 150\n [Camera]
17-03-18 03:03:18.714 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:19.124 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:19.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:19.124 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:19.124 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:19.124 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 03:03:19.124 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:19.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:19.124 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:19.124 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:19.124 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 03:03:19.314 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29169 786
17-03-18 03:03:19.464 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:19.504 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:03:19.504 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:03:19.504 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:19.504 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:19.504 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:03:19.504 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:19.504 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:19.504 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:03:19.504 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:19.514 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:03:19.654 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:19.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:19.654 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:19.654 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:19.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:19.654 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:19.664 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 03:03:19.664 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:19.664 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:19.664 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 03:03:19.844 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:19.844 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:19.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 29169 150' command took 2 ms to send, 1318 ms to get response, and 1329 ms overall
17-03-18 03:03:19.854 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133194
17-03-18 03:03:19.854 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13319 mm
17-03-18 03:03:19.854 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:19.854 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:03:19.854 -07 000000424 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:03:19.854 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:19.854 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 29096, sync = True, waitForSettling = False)
17-03-18 03:03:19.854 -07 000000629 INF: Z Motor: Moving to -0.133193 mm, started at -0.132729 mm, distance = -0.46 um
17-03-18 03:03:19.854 -07 000000626 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:03:19.864 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:19.864 -07 000000424 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:19.864 -07 000000424 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:19.864 -07 000000424 INF: Y Motor: Moving 1331 steps2
17-03-18 03:03:19.864 -07 000000629 INF: FPGA: Xmit ZDACW 29096\n [Z Motor]
17-03-18 03:03:19.864 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:03:19.874 -07 000000629 INF: FPGA: 'ZDACW 29096' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:03:19.874 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:19.874 -07 000000618 INF: FPGA: Recv ZDACR 29096
17-03-18 03:03:19.884 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:19.884 -07 000000629 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:03:19.884 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:20.064 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 406 ms.
17-03-18 03:03:20.064 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:03:20.074 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:20.074 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 407 ms.
17-03-18 03:03:20.074 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-18 03:03:20.074 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:20.074 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:20.074 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:20.074 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 417 ms.
17-03-18 03:03:20.084 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 03:03:20.254 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:03:20.254 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:03:20.294 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:20.294 -07 000000461 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:03:20.304 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:20.304 -07 000000424 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:20.304 -07 000000424 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:03:20.304 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.832 mm, average velocity = 2.090 mm/sec
17-03-18 03:03:21.254 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:21.254 -07 000000501 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:03:21.264 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:21.264 -07 000000424 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:21.294 -07 000000424 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:21.294 -07 000000424 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:21.294 -07 000000424 INF: Y Motor: Moved to 60.7329 after 1438 ms (table move)
17-03-18 03:03:21.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133193 mm (DAC = 29096)
17-03-18 03:03:21.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.294 -07 000000561 INF: FPGA: Recv ZSGSRD 30025
17-03-18 03:03:21.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:21.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.304 -07 000000444 INF: FPGA: Recv ZSGSRD 30015
17-03-18 03:03:21.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.314 -07 000000618 INF: FPGA: Recv ZSGSRD 30029
17-03-18 03:03:21.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.324 -07 000000502 INF: FPGA: Recv ZSGSRD 30027
17-03-18 03:03:21.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.334 -07 000000606 INF: FPGA: Recv ZSGSRD 30024
17-03-18 03:03:21.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.344 -07 000000430 INF: FPGA: Recv ZSGSRD 30025
17-03-18 03:03:21.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.354 -07 000000626 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:03:21.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.364 -07 000000618 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:03:21.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.374 -07 000000455 INF: FPGA: Recv ZSGSRD 30017
17-03-18 03:03:21.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.384 -07 000000576 INF: FPGA: Recv ZSGSRD 30027
17-03-18 03:03:21.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:21.394 -07 000000561 INF: FPGA: Recv ZPIEZORD 25511
17-03-18 03:03:21.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.404 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.440 V. Piezo Error = -9.9 V.
17-03-18 03:03:21.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30022 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30024 (-132.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30015 (-132.4 uncal um), Max = 30029 (-132.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:03:21.404 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30022, posNoise = 7, negNoise = 7
17-03-18 03:03:21.404 -07 000000610 INF: Z Motor: After move to -0.133193, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:21.404 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 106 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:03:21.404 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:21.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 03:03:21.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:21.454 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.133191048931082. ----------
17-03-18 03:03:21.454 -07 000000610 INF: Cycle	107	Tile	2	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:21.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28920, sync = True, waitForSettling = True)
17-03-18 03:03:21.454 -07 000000610 INF: Z Motor: Moving to -0.132387 mm, started at -0.133191 mm, distance = 0.80 um
17-03-18 03:03:21.454 -07 000000610 INF: FPGA: Xmit ZDACW 28920\n [Z Motor]
17-03-18 03:03:21.454 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:03:21.464 -07 000000610 INF: FPGA: 'ZDACW 28920' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:21.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:21.464 -07 000000467 INF: FPGA: Recv ZDACR 28920
17-03-18 03:03:21.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:21.534 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:21.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:21.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.624 -07 000000501 INF: FPGA: Recv ZSGSRD 29908
17-03-18 03:03:21.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:21.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.634 -07 000000467 INF: FPGA: Recv ZSGSRD 29904
17-03-18 03:03:21.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.644 -07 000000579 INF: FPGA: Recv ZSGSRD 29894
17-03-18 03:03:21.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.654 -07 000000424 INF: FPGA: Recv ZSGSRD 29895
17-03-18 03:03:21.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.664 -07 000000561 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:03:21.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.674 -07 000000590 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:03:21.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.684 -07 000000461 INF: FPGA: Recv ZSGSRD 29896
17-03-18 03:03:21.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.694 -07 000000444 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:03:21.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.704 -07 000000626 INF: FPGA: Recv ZSGSRD 29892
17-03-18 03:03:21.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:21.714 -07 000000579 INF: FPGA: Recv ZSGSRD 29902
17-03-18 03:03:21.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:21.724 -07 000000569 INF: FPGA: Recv ZPIEZORD 25311
17-03-18 03:03:21.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:21.734 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.413 V. Piezo Error = -10.1 V.
17-03-18 03:03:21.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29899 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29898 (-131.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29892 (-131.6 uncal um), Max = 29908 (-131.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:03:21.734 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29899, posNoise = 9, negNoise = 7
17-03-18 03:03:21.734 -07 000000610 INF: Z Motor: After move to -0.132387, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:21.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:03:21.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:21.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:21.734 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:21.734 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:21.734 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:21.734 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:21.734 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:21.734 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:21.734 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:21.734 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:21.734 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:21.734 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:21.744 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:03:21.744 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:21.744 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:03:21.744 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:21.754 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:03:21.754 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:21.754 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:03:21.754 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:03:21.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 29096 150\n [Camera]
17-03-18 03:03:21.954 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:22.364 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:22.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:22.364 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:22.364 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:22.364 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 03:03:22.364 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:22.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:22.364 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:22.364 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:22.364 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 03:03:22.554 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29096 786
17-03-18 03:03:22.704 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:22.764 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:03:22.764 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:03:22.764 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:22.764 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:22.764 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:03:22.764 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 03:03:22.764 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:03:22.764 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:22.764 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:22.774 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.009895,
17-03-18 03:03:22.774 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 03:03:22.894 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:22.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:22.894 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:22.894 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:22.894 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 03:03:22.894 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:22.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:22.904 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:22.904 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:22.904 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 03:03:23.084 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:23.084 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:23.084 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 29096 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:03:23.094 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133104
17-03-18 03:03:23.094 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13310 mm
17-03-18 03:03:23.094 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:23.094 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:03:23.094 -07 000000502 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:03:23.094 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:23.094 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 29076, sync = True, waitForSettling = False)
17-03-18 03:03:23.094 -07 000000467 INF: Z Motor: Moving to -0.133101 mm, started at -0.132401 mm, distance = -0.70 um
17-03-18 03:03:23.094 -07 000000629 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:03:23.104 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:23.104 -07 000000502 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:23.104 -07 000000502 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:23.104 -07 000000502 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:03:23.104 -07 000000467 INF: FPGA: Xmit ZDACW 29076\n [Z Motor]
17-03-18 03:03:23.104 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:03:23.114 -07 000000467 INF: FPGA: 'ZDACW 29076' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:03:23.114 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:23.114 -07 000000606 INF: FPGA: Recv ZDACR 29076
17-03-18 03:03:23.124 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:23.124 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:23.124 -07 000000467 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:03:23.284 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:03:23.284 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:03:23.284 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:23.284 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 03:03:23.284 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:03:23.284 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:23.284 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:23.294 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:23.294 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:03:23.294 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:03:23.494 -07 000000629 INF: FPGA: Recv YMVTILE
17-03-18 03:03:23.494 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:03:23.544 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:23.544 -07 000000512 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:03:23.554 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:23.554 -07 000000502 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:23.554 -07 000000502 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:03:23.554 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-18 03:03:24.504 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:24.504 -07 000000462 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:03:24.514 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.514 -07 000000502 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:24.534 -07 000000502 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:24.534 -07 000000502 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:03:24.534 -07 000000502 INF: Y Motor: Moved to 61.5640 after 1445 ms (table move)
17-03-18 03:03:24.544 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133101 mm (DAC = 29076)
17-03-18 03:03:24.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.544 -07 000000569 INF: FPGA: Recv ZSGSRD 30010
17-03-18 03:03:24.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:24.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.554 -07 000000444 INF: FPGA: Recv ZSGSRD 30009
17-03-18 03:03:24.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.564 -07 000000618 INF: FPGA: Recv ZSGSRD 30008
17-03-18 03:03:24.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.574 -07 000000462 INF: FPGA: Recv ZSGSRD 30019
17-03-18 03:03:24.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.584 -07 000000424 INF: FPGA: Recv ZSGSRD 30018
17-03-18 03:03:24.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.594 -07 000000579 INF: FPGA: Recv ZSGSRD 30010
17-03-18 03:03:24.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.604 -07 000000501 INF: FPGA: Recv ZSGSRD 30008
17-03-18 03:03:24.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.614 -07 000000561 INF: FPGA: Recv ZSGSRD 30007
17-03-18 03:03:24.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.624 -07 000000512 INF: FPGA: Recv ZSGSRD 30010
17-03-18 03:03:24.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.634 -07 000000502 INF: FPGA: Recv ZSGSRD 30010
17-03-18 03:03:24.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:24.644 -07 000000629 INF: FPGA: Recv ZPIEZORD 25512
17-03-18 03:03:24.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.654 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.437 V. Piezo Error = -9.9 V.
17-03-18 03:03:24.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30011 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30010 (-132.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30007 (-132.3 uncal um), Max = 30019 (-132.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:03:24.654 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30011, posNoise = 8, negNoise = 4
17-03-18 03:03:24.654 -07 000000610 INF: Z Motor: After move to -0.133101, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:24.654 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:03:24.654 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:24.704 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 03:03:24.704 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:24.704 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133120382597523. ----------
17-03-18 03:03:24.704 -07 000000610 INF: Cycle	107	Tile	3	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:24.704 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28900, sync = True, waitForSettling = True)
17-03-18 03:03:24.704 -07 000000610 INF: Z Motor: Moving to -0.132296 mm, started at -0.133120 mm, distance = 0.82 um
17-03-18 03:03:24.704 -07 000000610 INF: FPGA: Xmit ZDACW 28900\n [Z Motor]
17-03-18 03:03:24.704 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:03:24.714 -07 000000610 INF: FPGA: 'ZDACW 28900' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:03:24.714 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:24.714 -07 000000618 INF: FPGA: Recv ZDACR 28900
17-03-18 03:03:24.724 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.724 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:24.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.874 -07 000000467 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:03:24.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:24.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.884 -07 000000444 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:03:24.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.894 -07 000000629 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:03:24.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.904 -07 000000501 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:03:24.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.914 -07 000000430 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:03:24.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.924 -07 000000462 INF: FPGA: Recv ZSGSRD 29878
17-03-18 03:03:24.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.934 -07 000000590 INF: FPGA: Recv ZSGSRD 29881
17-03-18 03:03:24.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.944 -07 000000579 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:03:24.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.954 -07 000000512 INF: FPGA: Recv ZSGSRD 29887
17-03-18 03:03:24.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:24.964 -07 000000606 INF: FPGA: Recv ZSGSRD 29886
17-03-18 03:03:24.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.974 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:24.974 -07 000000467 INF: FPGA: Recv ZPIEZORD 25360
17-03-18 03:03:24.984 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:24.984 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.410 V. Piezo Error = -9.9 V.
17-03-18 03:03:24.984 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29884 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29886 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29878 (-131.5 uncal um), Max = 29887 (-131.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:24.984 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29884, posNoise = 3, negNoise = 6
17-03-18 03:03:24.984 -07 000000610 INF: Z Motor: After move to -0.132296, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:24.984 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:03:24.984 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:24.984 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:24.984 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:24.984 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:24.984 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:24.984 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:24.984 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:24.984 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:24.984 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 03:03:24.984 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:24.984 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:24.984 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:24.994 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:24.994 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:24.994 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:24.994 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:25.004 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:03:25.004 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:25.004 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:03:25.004 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:03:25.004 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 29076 150\n [Camera]
17-03-18 03:03:25.204 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:25.614 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:25.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:25.614 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:25.614 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:25.614 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 03:03:25.614 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:25.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:25.614 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:25.614 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:25.614 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 03:03:25.804 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29076 786
17-03-18 03:03:25.954 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:26.014 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:03:26.014 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:03:26.014 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:26.014 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 03:03:26.014 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:03:26.014 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:26.014 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:26.014 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:03:26.014 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:26.024 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:03:26.144 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:26.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:26.144 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:26.144 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:26.144 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 03:03:26.144 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:26.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:26.154 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:26.294 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:26.294 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:03:26.334 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:26.334 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:26.334 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 29076 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:03:26.344 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:03:26.344 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.132304507655519. ------
17-03-18 03:03:26.344 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:26.344 -07 000000461 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13870 mm
17-03-18 03:03:26.344 -07 000000461 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:26.344 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 30298, sync = True, waitForSettling = False)
17-03-18 03:03:26.344 -07 000000590 INF: Z Motor: Moving to -0.138695 mm, started at -0.132305 mm, distance = -6.39 um
17-03-18 03:03:26.344 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:03:26.344 -07 000000629 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:03:26.344 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:26.354 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:26.354 -07 000000590 INF: FPGA: Xmit ZDACW 30298\n [Z Motor]
17-03-18 03:03:26.364 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:03:26.374 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:26.374 -07 000000590 INF: FPGA: 'ZDACW 30298' command took 12 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 03:03:26.374 -07 000000591 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:03:26.384 -07 000000430 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:03:26.384 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 32 ms overall
17-03-18 03:03:26.384 -07 000000629 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:26.384 -07 000000629 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:26.384 -07 000000629 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:03:26.394 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:26.394 -07 000000591 INF: FPGA: Recv ZDACR 30298
17-03-18 03:03:26.404 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:26.404 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:26.404 -07 000000590 INF: Z Motor: MoveAbsStepped took 56 ms (did NOT wait for settling yet))
17-03-18 03:03:26.534 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:26.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:26.544 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:03:26.544 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 03:03:26.544 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:26.544 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:26.544 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:03:26.584 -07 000000462 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:03:26.584 -07 000000430 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:03:26.674 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:03:26.674 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:03:26.674 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:26.674 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:26.674 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 529 ms.
17-03-18 03:03:26.784 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:03:26.784 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 3 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 03:03:26.824 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:26.834 -07 000000626 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:03:26.844 -07 000000629 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:26.844 -07 000000629 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:26.844 -07 000000629 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:03:26.844 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.839 mm, average velocity = 2.097 mm/sec
17-03-18 03:03:27.794 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:27.794 -07 000000591 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:03:27.804 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:27.804 -07 000000629 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:27.824 -07 000000629 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:27.824 -07 000000629 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:27.834 -07 000000629 INF: Y Motor: Moved to 62.3955 after 1482 ms (table move)
17-03-18 03:03:27.834 -07 000000461 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138695 mm (DAC = 30298)
17-03-18 03:03:27.834 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.834 -07 000000467 INF: FPGA: Recv ZSGSRD 30883
17-03-18 03:03:27.844 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:27.844 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.844 -07 000000455 INF: FPGA: Recv ZSGSRD 30879
17-03-18 03:03:27.854 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.854 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.854 -07 000000430 INF: FPGA: Recv ZSGSRD 30884
17-03-18 03:03:27.864 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.864 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.864 -07 000000591 INF: FPGA: Recv ZSGSRD 30878
17-03-18 03:03:27.874 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.874 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.874 -07 000000501 INF: FPGA: Recv ZSGSRD 30887
17-03-18 03:03:27.884 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.884 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.884 -07 000000618 INF: FPGA: Recv ZSGSRD 30882
17-03-18 03:03:27.894 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.894 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.894 -07 000000629 INF: FPGA: Recv ZSGSRD 30883
17-03-18 03:03:27.904 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.904 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.904 -07 000000569 INF: FPGA: Recv ZSGSRD 30875
17-03-18 03:03:27.914 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.914 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.914 -07 000000576 INF: FPGA: Recv ZSGSRD 30880
17-03-18 03:03:27.924 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.924 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:27.924 -07 000000501 INF: FPGA: Recv ZSGSRD 30876
17-03-18 03:03:27.934 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.934 -07 000000461 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:27.934 -07 000000467 INF: FPGA: Recv ZPIEZORD 26659
17-03-18 03:03:27.944 -07 000000461 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:27.944 -07 000000461 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.623 V. Piezo Error = -9.3 V.
17-03-18 03:03:27.944 -07 000000461 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.7 um, Read 10 ADC samples: Avg = 30881 (-137.9 uncal um), Error = 0.8 uncal um, Median = 30881 (-137.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30875 (-137.9 uncal um), Max = 30887 (-137.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:27.944 -07 000000461 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30881, posNoise = 6, negNoise = 6
17-03-18 03:03:27.944 -07 000000461 INF: Z Motor: After move to -0.138695, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:27.944 -07 000000461 INF: Z Motor: Settle wait time = 1486 ms, measure time = 107 ms (allowed 150 ms), total time = 1593 ms
17-03-18 03:03:27.944 -07 000000461 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:27.994 -07 000000461 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1645 ms
17-03-18 03:03:27.994 -07 000000461 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:27.994 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:27.994 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:27.994 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:27.994 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:27.994 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:03:27.994 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:27.994 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:27.994 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:03:28.004 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:28.004 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:03:28.014 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:03:28.014 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:03:28.014 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:03:28.064 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:03:28.134 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.024884,
17-03-18 03:03:28.364 -07 000000579 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:03:28.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:03:28.364 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:03:28.364 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 03:03:28.404 -07 000000606 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:03:28.404 -07 000000444 INF: FPGA: Recv CAMSNAP
17-03-18 03:03:28.404 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:03:28.484 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:03:28.484 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:28.494 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:03:28.494 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-18 03:03:28.504 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:28.504 -07 000000424 INF: Autofocus start
17-03-18 03:03:28.504 -07 000000424 INF: MeasureProfile start
17-03-18 03:03:28.504 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:28.514 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:28.514 -07 000000462 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:03:28.514 -07 000000424 INF: MeasureProfile done
17-03-18 03:03:28.514 -07 000000424 INF: X=-32  Z correction [um]=-0.1591732
17-03-18 03:03:28.514 -07 000000424 INF: Autofocus finished
17-03-18 03:03:28.714 -07 000000591 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:03:28.714 -07 000000462 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:03:28.714 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.138709447160855. ----------
17-03-18 03:03:28.714 -07 000000610 INF: Cycle	107	Tile	4	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:28.724 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28776, sync = True, waitForSettling = True)
17-03-18 03:03:28.724 -07 000000610 INF: Z Motor: Moving to -0.131728 mm, started at -0.138709 mm, distance = 6.98 um
17-03-18 03:03:28.724 -07 000000610 INF: FPGA: Xmit ZDACW 28776\n [Z Motor]
17-03-18 03:03:28.724 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:03:28.734 -07 000000610 INF: FPGA: 'ZDACW 28776' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.734 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:28.734 -07 000000461 INF: FPGA: Recv ZDACR 28776
17-03-18 03:03:28.744 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.744 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:28.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.894 -07 000000501 INF: FPGA: Recv ZSGSRD 29795
17-03-18 03:03:28.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:28.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.904 -07 000000629 INF: FPGA: Recv ZSGSRD 29798
17-03-18 03:03:28.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.914 -07 000000591 INF: FPGA: Recv ZSGSRD 29790
17-03-18 03:03:28.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.924 -07 000000618 INF: FPGA: Recv ZSGSRD 29792
17-03-18 03:03:28.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.934 -07 000000502 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:03:28.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.944 -07 000000569 INF: FPGA: Recv ZSGSRD 29799
17-03-18 03:03:28.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.954 -07 000000424 INF: FPGA: Recv ZSGSRD 29798
17-03-18 03:03:28.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.964 -07 000000462 INF: FPGA: Recv ZSGSRD 29790
17-03-18 03:03:28.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.974 -07 000000467 INF: FPGA: Recv ZSGSRD 29798
17-03-18 03:03:28.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:28.984 -07 000000579 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:03:28.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:28.994 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:28.994 -07 000000501 INF: FPGA: Recv ZPIEZORD 25215
17-03-18 03:03:29.004 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:29.004 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.391 V. Piezo Error = -10.0 V.
17-03-18 03:03:29.004 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29795 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29794 (-130.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29790 (-130.9 uncal um), Max = 29799 (-131.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:03:29.004 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29795, posNoise = 4, negNoise = 5
17-03-18 03:03:29.004 -07 000000610 INF: Z Motor: After move to -0.131728, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:29.004 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:03:29.004 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:29.004 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:29.004 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:29.004 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:29.004 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:29.004 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:29.004 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:29.004 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:29.004 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:29.004 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:29.004 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:03:29.004 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:29.004 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:29.004 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:29.004 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:03:29.014 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:29.014 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:03:29.014 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:03:29.024 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:03:29.024 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:03:29.024 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28953 150\n [Camera]
17-03-18 03:03:29.224 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:29.624 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:29.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:29.624 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:29.624 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:29.624 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:29.634 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:29.634 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:29.634 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:03:29.634 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:29.634 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:03:29.814 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28953 786
17-03-18 03:03:29.964 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:30.004 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:03:30.004 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:03:30.004 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:30.004 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:03:30.014 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:03:30.014 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:30.014 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:30.014 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:30.014 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:03:30.014 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:03:30.164 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:30.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:30.164 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:30.274 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:30.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:30.274 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:30.274 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:30.274 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:03:30.274 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:30.284 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:03:30.354 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:30.354 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:30.354 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28953 150' command took 2 ms to send, 1323 ms to get response, and 1328 ms overall
17-03-18 03:03:30.354 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132380
17-03-18 03:03:30.354 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13238 mm
17-03-18 03:03:30.354 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:30.354 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:03:30.354 -07 000000430 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:03:30.354 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 28918, sync = True, waitForSettling = False)
17-03-18 03:03:30.354 -07 000000569 INF: Z Motor: Moving to -0.132378 mm, started at -0.131733 mm, distance = -0.65 um
17-03-18 03:03:30.354 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:30.364 -07 000000569 INF: FPGA: Xmit ZDACW 28918\n [Z Motor]
17-03-18 03:03:30.364 -07 000000502 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:03:30.364 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:03:30.364 -07 000000430 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:30.364 -07 000000430 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:30.364 -07 000000430 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:03:30.364 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:03:30.374 -07 000000569 INF: FPGA: 'ZDACW 28918' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:03:30.374 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:30.374 -07 000000629 INF: FPGA: Recv ZDACR 28918
17-03-18 03:03:30.384 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:30.384 -07 000000569 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:03:30.384 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:30.654 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:30.654 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:03:30.654 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:30.664 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:30.664 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:03:30.664 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:03:30.664 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:30.664 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:30.664 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 503 ms.
17-03-18 03:03:30.674 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:03:30.754 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:03:30.754 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-18 03:03:30.804 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:30.804 -07 000000569 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:03:30.814 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:30.814 -07 000000430 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:30.814 -07 000000430 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:03:30.814 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.837 mm, average velocity = 2.114 mm/sec
17-03-18 03:03:31.534 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:31.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:31.764 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:31.764 -07 000000591 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:03:31.774 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.774 -07 000000430 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:31.794 -07 000000430 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:31.794 -07 000000430 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:03:31.794 -07 000000430 INF: Y Motor: Moved to 63.2241 after 1440 ms (table move)
17-03-18 03:03:31.804 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132378 mm (DAC = 28918)
17-03-18 03:03:31.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.804 -07 000000626 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:03:31.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.814 -07 000000444 INF: FPGA: Recv ZSGSRD 29890
17-03-18 03:03:31.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:31.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.824 -07 000000502 INF: FPGA: Recv ZSGSRD 29902
17-03-18 03:03:31.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.834 -07 000000569 INF: FPGA: Recv ZSGSRD 29900
17-03-18 03:03:31.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.844 -07 000000618 INF: FPGA: Recv ZSGSRD 29896
17-03-18 03:03:31.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.854 -07 000000501 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:03:31.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.864 -07 000000576 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:03:31.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.874 -07 000000467 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:03:31.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.884 -07 000000626 INF: FPGA: Recv ZSGSRD 29888
17-03-18 03:03:31.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:31.894 -07 000000512 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:03:31.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:31.904 -07 000000579 INF: FPGA: Recv ZPIEZORD 25368
17-03-18 03:03:31.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.914 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.413 V. Piezo Error = -9.9 V.
17-03-18 03:03:31.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29896 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29897 (-131.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29888 (-131.5 uncal um), Max = 29902 (-131.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:31.914 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29896, posNoise = 6, negNoise = 8
17-03-18 03:03:31.914 -07 000000610 INF: Z Motor: After move to -0.132378, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:31.914 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 110 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:03:31.914 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:31.954 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:03:31.954 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:31.954 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.132381598201221. ----------
17-03-18 03:03:31.954 -07 000000610 INF: Cycle	107	Tile	5	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:31.954 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28742, sync = True, waitForSettling = True)
17-03-18 03:03:31.954 -07 000000610 INF: Z Motor: Moving to -0.131572 mm, started at -0.132382 mm, distance = 0.81 um
17-03-18 03:03:31.954 -07 000000610 INF: FPGA: Xmit ZDACW 28742\n [Z Motor]
17-03-18 03:03:31.954 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:03:31.964 -07 000000610 INF: FPGA: 'ZDACW 28742' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:31.964 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:31.964 -07 000000501 INF: FPGA: Recv ZDACR 28742
17-03-18 03:03:31.974 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:31.974 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:32.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.124 -07 000000576 INF: FPGA: Recv ZSGSRD 29770
17-03-18 03:03:32.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:32.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.134 -07 000000502 INF: FPGA: Recv ZSGSRD 29775
17-03-18 03:03:32.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.144 -07 000000606 INF: FPGA: Recv ZSGSRD 29773
17-03-18 03:03:32.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.154 -07 000000502 INF: FPGA: Recv ZSGSRD 29768
17-03-18 03:03:32.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.164 -07 000000629 INF: FPGA: Recv ZSGSRD 29772
17-03-18 03:03:32.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.174 -07 000000606 INF: FPGA: Recv ZSGSRD 29771
17-03-18 03:03:32.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.184 -07 000000467 INF: FPGA: Recv ZSGSRD 29772
17-03-18 03:03:32.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.194 -07 000000579 INF: FPGA: Recv ZSGSRD 29766
17-03-18 03:03:32.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.204 -07 000000444 INF: FPGA: Recv ZSGSRD 29774
17-03-18 03:03:32.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:32.214 -07 000000424 INF: FPGA: Recv ZSGSRD 29778
17-03-18 03:03:32.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:32.224 -07 000000461 INF: FPGA: Recv ZPIEZORD 25243
17-03-18 03:03:32.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:32.234 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.386 V. Piezo Error = -9.9 V.
17-03-18 03:03:32.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29772 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29772 (-130.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29766 (-130.8 uncal um), Max = 29778 (-130.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:32.234 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29772, posNoise = 6, negNoise = 6
17-03-18 03:03:32.234 -07 000000610 INF: Z Motor: After move to -0.131572, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:32.234 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:32.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:32.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:32.234 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:32.234 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:32.234 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:32.234 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:32.234 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:32.234 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:32.234 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:03:32.234 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:32.234 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:32.234 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:32.234 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:32.234 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:32.244 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:03:32.244 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:32.254 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:03:32.254 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:03:32.254 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:03:32.254 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:32.254 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28918 150\n [Camera]
17-03-18 03:03:32.454 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:32.864 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:32.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:32.864 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:32.864 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:32.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:32.864 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:32.864 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:32.864 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:03:32.864 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:32.874 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:03:33.054 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28918 786
17-03-18 03:03:33.204 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:33.234 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:03:33.234 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 03:03:33.234 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:33.234 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:03:33.234 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:03:33.234 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:33.244 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:33.244 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:33.244 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:03:33.254 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:03:33.394 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:33.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:33.394 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:33.394 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:33.394 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-18 03:03:33.394 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:33.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:33.404 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:33.404 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:33.404 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-18 03:03:33.494 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.047997,
17-03-18 03:03:33.584 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:33.584 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:33.584 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28918 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:03:33.594 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.131999
17-03-18 03:03:33.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13200 mm
17-03-18 03:03:33.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:33.594 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:03:33.594 -07 000000561 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:03:33.594 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:33.594 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28835, sync = True, waitForSettling = False)
17-03-18 03:03:33.594 -07 000000591 INF: Z Motor: Moving to -0.131998 mm, started at -0.131585 mm, distance = -0.41 um
17-03-18 03:03:33.594 -07 000000424 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:03:33.604 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:33.604 -07 000000561 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:33.604 -07 000000561 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:33.604 -07 000000561 INF: Y Motor: Moving 1342 steps-18
17-03-18 03:03:33.604 -07 000000591 INF: FPGA: Xmit ZDACW 28835\n [Z Motor]
17-03-18 03:03:33.604 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:03:33.614 -07 000000591 INF: FPGA: 'ZDACW 28835' command took 1 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:03:33.614 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:33.614 -07 000000606 INF: FPGA: Recv ZDACR 28835
17-03-18 03:03:33.624 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:33.624 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:33.624 -07 000000591 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 03:03:33.784 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:03:33.784 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:03:33.784 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:33.784 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:03:33.784 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:03:33.784 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:33.784 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:33.784 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:33.784 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:03:33.794 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:03:33.994 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 03:03:33.994 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:03:34.044 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:34.044 -07 000000591 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:03:34.054 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:34.054 -07 000000561 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:34.054 -07 000000561 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 03:03:34.054 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.107 mm/sec
17-03-18 03:03:35.004 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:35.004 -07 000000618 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:03:35.014 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:35.014 -07 000000561 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:35.034 -07 000000561 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:35.034 -07 000000561 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:35.034 -07 000000561 INF: Y Motor: Moved to 64.0571 after 1442 ms (table move)
17-03-18 03:03:35.034 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131998 mm (DAC = 28835)
17-03-18 03:03:35.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.044 -07 000000590 INF: FPGA: Recv ZSGSRD 29840
17-03-18 03:03:35.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:35.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.044 -07 000000576 INF: FPGA: Recv ZSGSRD 29831
17-03-18 03:03:35.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.054 -07 000000462 INF: FPGA: Recv ZSGSRD 29841
17-03-18 03:03:35.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.064 -07 000000618 INF: FPGA: Recv ZSGSRD 29841
17-03-18 03:03:35.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.074 -07 000000502 INF: FPGA: Recv ZSGSRD 29840
17-03-18 03:03:35.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.084 -07 000000569 INF: FPGA: Recv ZSGSRD 29840
17-03-18 03:03:35.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.094 -07 000000430 INF: FPGA: Recv ZSGSRD 29837
17-03-18 03:03:35.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.104 -07 000000629 INF: FPGA: Recv ZSGSRD 29840
17-03-18 03:03:35.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.114 -07 000000467 INF: FPGA: Recv ZSGSRD 29830
17-03-18 03:03:35.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.124 -07 000000561 INF: FPGA: Recv ZSGSRD 29838
17-03-18 03:03:35.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.134 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:35.134 -07 000000591 INF: FPGA: Recv ZPIEZORD 25316
17-03-18 03:03:35.144 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.144 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.400 V. Piezo Error = -9.9 V.
17-03-18 03:03:35.144 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29838 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29840 (-131.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29830 (-131.2 uncal um), Max = 29841 (-131.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:35.144 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29838, posNoise = 3, negNoise = 8
17-03-18 03:03:35.144 -07 000000610 INF: Z Motor: After move to -0.131998, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:35.144 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 104 ms (allowed 150 ms), total time = 1548 ms
17-03-18 03:03:35.144 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:35.194 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-18 03:03:35.194 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:35.194 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.132008993896998. ----------
17-03-18 03:03:35.194 -07 000000610 INF: Cycle	107	Tile	6	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:35.194 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28658, sync = True, waitForSettling = True)
17-03-18 03:03:35.194 -07 000000610 INF: Z Motor: Moving to -0.131188 mm, started at -0.132009 mm, distance = 0.82 um
17-03-18 03:03:35.194 -07 000000610 INF: FPGA: Xmit ZDACW 28658\n [Z Motor]
17-03-18 03:03:35.194 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:03:35.204 -07 000000610 INF: FPGA: 'ZDACW 28658' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:35.204 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:35.204 -07 000000626 INF: FPGA: Recv ZDACR 28658
17-03-18 03:03:35.214 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.214 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:35.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.364 -07 000000569 INF: FPGA: Recv ZSGSRD 29712
17-03-18 03:03:35.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:35.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.374 -07 000000512 INF: FPGA: Recv ZSGSRD 29715
17-03-18 03:03:35.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.384 -07 000000590 INF: FPGA: Recv ZSGSRD 29714
17-03-18 03:03:35.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.394 -07 000000424 INF: FPGA: Recv ZSGSRD 29709
17-03-18 03:03:35.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.404 -07 000000561 INF: FPGA: Recv ZSGSRD 29721
17-03-18 03:03:35.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.414 -07 000000618 INF: FPGA: Recv ZSGSRD 29709
17-03-18 03:03:35.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.424 -07 000000576 INF: FPGA: Recv ZSGSRD 29711
17-03-18 03:03:35.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.434 -07 000000462 INF: FPGA: Recv ZSGSRD 29712
17-03-18 03:03:35.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.444 -07 000000455 INF: FPGA: Recv ZSGSRD 29705
17-03-18 03:03:35.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:35.454 -07 000000629 INF: FPGA: Recv ZSGSRD 29718
17-03-18 03:03:35.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.464 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:35.464 -07 000000591 INF: FPGA: Recv ZPIEZORD 25169
17-03-18 03:03:35.474 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:35.474 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.373 V. Piezo Error = -10.0 V.
17-03-18 03:03:35.474 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29713 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29712 (-130.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29705 (-130.4 uncal um), Max = 29721 (-130.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:35.474 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29713, posNoise = 8, negNoise = 8
17-03-18 03:03:35.474 -07 000000610 INF: Z Motor: After move to -0.131188, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:35.474 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:35.474 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:35.474 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:35.474 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:35.474 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:35.474 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:35.474 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:35.474 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:35.474 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:35.474 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:35.474 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:35.474 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:35.474 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:35.484 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:35.484 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:35.484 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:03:35.484 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:35.494 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:03:35.494 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:03:35.494 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:03:35.494 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:35.504 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28835 150\n [Camera]
17-03-18 03:03:35.704 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:36.104 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:36.104 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:36.104 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:36.104 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:36.104 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:03:36.104 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:36.104 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:36.114 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:36.114 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:36.114 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:03:36.294 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28835 786
17-03-18 03:03:36.444 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:36.484 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:03:36.484 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:03:36.484 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:36.484 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:03:36.484 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:03:36.484 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:36.484 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:36.484 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:03:36.494 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:36.494 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:03:36.534 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:36.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:36.644 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:36.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:36.644 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:36.764 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:36.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:36.764 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:36.764 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:36.764 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:03:36.764 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:36.764 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:03:36.834 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:36.834 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:36.834 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28835 150' command took 2 ms to send, 1322 ms to get response, and 1331 ms overall
17-03-18 03:03:36.834 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131801
17-03-18 03:03:36.834 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13180 mm
17-03-18 03:03:36.834 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:36.834 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:03:36.834 -07 000000501 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:03:36.834 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:36.834 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28792, sync = True, waitForSettling = False)
17-03-18 03:03:36.834 -07 000000576 INF: Z Motor: Moving to -0.131801 mm, started at -0.131206 mm, distance = -0.60 um
17-03-18 03:03:36.844 -07 000000591 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:03:36.844 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:03:36.844 -07 000000501 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:36.844 -07 000000501 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:36.844 -07 000000501 INF: Y Motor: Moving 1337 steps-11
17-03-18 03:03:36.844 -07 000000576 INF: FPGA: Xmit ZDACW 28792\n [Z Motor]
17-03-18 03:03:36.844 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:03:36.854 -07 000000576 INF: FPGA: 'ZDACW 28792' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:03:36.854 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:36.864 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:36.864 -07 000000590 INF: FPGA: Recv ZDACR 28792
17-03-18 03:03:36.874 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:36.874 -07 000000576 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 03:03:37.144 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:03:37.144 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:03:37.144 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:37.144 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:03:37.144 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:03:37.144 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:37.154 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:37.154 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 512 ms.
17-03-18 03:03:37.154 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:37.164 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:03:37.224 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 03:03:37.224 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:03:37.284 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:37.284 -07 000000455 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:03:37.294 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:37.294 -07 000000501 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:37.294 -07 000000501 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:03:37.294 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.835 mm, average velocity = 2.159 mm/sec
17-03-18 03:03:38.244 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:38.244 -07 000000606 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:03:38.254 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:38.254 -07 000000501 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:38.284 -07 000000501 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:38.284 -07 000000501 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:38.284 -07 000000501 INF: Y Motor: Moved to 64.8789 after 1443 ms (table move)
17-03-18 03:03:38.284 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131801 mm (DAC = 28792)
17-03-18 03:03:38.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.304 -07 000000502 INF: FPGA: Recv ZSGSRD 29814
17-03-18 03:03:38.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:03:38.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.314 -07 000000461 INF: FPGA: Recv ZSGSRD 29807
17-03-18 03:03:38.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.324 -07 000000618 INF: FPGA: Recv ZSGSRD 29801
17-03-18 03:03:38.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.334 -07 000000579 INF: FPGA: Recv ZSGSRD 29805
17-03-18 03:03:38.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.344 -07 000000569 INF: FPGA: Recv ZSGSRD 29800
17-03-18 03:03:38.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.354 -07 000000424 INF: FPGA: Recv ZSGSRD 29809
17-03-18 03:03:38.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.364 -07 000000467 INF: FPGA: Recv ZSGSRD 29807
17-03-18 03:03:38.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.374 -07 000000629 INF: FPGA: Recv ZSGSRD 29810
17-03-18 03:03:38.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.384 -07 000000444 INF: FPGA: Recv ZSGSRD 29808
17-03-18 03:03:38.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.394 -07 000000512 INF: FPGA: Recv ZSGSRD 29805
17-03-18 03:03:38.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:38.404 -07 000000502 INF: FPGA: Recv ZPIEZORD 25321
17-03-18 03:03:38.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.414 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.393 V. Piezo Error = -9.8 V.
17-03-18 03:03:38.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29807 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29807 (-131.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29800 (-131.0 uncal um), Max = 29814 (-131.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:03:38.414 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29807, posNoise = 7, negNoise = 7
17-03-18 03:03:38.414 -07 000000610 INF: Z Motor: After move to -0.131801, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:38.414 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 126 ms (allowed 150 ms), total time = 1572 ms
17-03-18 03:03:38.414 -07 000000610 INF: Z Motor: Waiting extra 24 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:38.444 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:03:38.444 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:38.444 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.131809843320604. ----------
17-03-18 03:03:38.444 -07 000000610 INF: Cycle	107	Tile	7	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:38.444 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28615, sync = True, waitForSettling = True)
17-03-18 03:03:38.444 -07 000000610 INF: Z Motor: Moving to -0.130991 mm, started at -0.131810 mm, distance = 0.82 um
17-03-18 03:03:38.444 -07 000000610 INF: FPGA: Xmit ZDACW 28615\n [Z Motor]
17-03-18 03:03:38.444 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:03:38.454 -07 000000610 INF: FPGA: 'ZDACW 28615' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:38.454 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:38.454 -07 000000591 INF: FPGA: Recv ZDACR 28615
17-03-18 03:03:38.464 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.464 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:38.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.614 -07 000000591 INF: FPGA: Recv ZSGSRD 29684
17-03-18 03:03:38.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:38.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.624 -07 000000501 INF: FPGA: Recv ZSGSRD 29683
17-03-18 03:03:38.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.634 -07 000000576 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:03:38.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.644 -07 000000430 INF: FPGA: Recv ZSGSRD 29681
17-03-18 03:03:38.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.654 -07 000000512 INF: FPGA: Recv ZSGSRD 29680
17-03-18 03:03:38.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.664 -07 000000424 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:03:38.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.674 -07 000000590 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:03:38.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.684 -07 000000629 INF: FPGA: Recv ZSGSRD 29681
17-03-18 03:03:38.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.694 -07 000000579 INF: FPGA: Recv ZSGSRD 29683
17-03-18 03:03:38.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:38.704 -07 000000626 INF: FPGA: Recv ZSGSRD 29684
17-03-18 03:03:38.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.714 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:38.714 -07 000000591 INF: FPGA: Recv ZPIEZORD 25158
17-03-18 03:03:38.724 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:38.724 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.366 V. Piezo Error = -9.9 V.
17-03-18 03:03:38.724 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29681 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29681 (-130.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29679 (-130.2 uncal um), Max = 29684 (-130.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:03:38.724 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29681, posNoise = 3, negNoise = 2
17-03-18 03:03:38.724 -07 000000610 INF: Z Motor: After move to -0.130991, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:38.724 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:38.724 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:38.724 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:38.724 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:38.724 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:38.724 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:38.724 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:38.724 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:38.724 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:38.724 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:38.724 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:38.724 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:38.724 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:38.734 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:38.734 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:38.734 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:38.734 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:38.744 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:03:38.744 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:03:38.744 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:03:38.744 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:03:38.744 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28792 150\n [Camera]
17-03-18 03:03:38.854 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.011254,
17-03-18 03:03:38.944 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:39.344 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:39.344 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:39.354 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:39.354 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:39.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:39.354 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:39.354 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:39.354 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:03:39.354 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:39.354 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:03:39.544 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28792 786
17-03-18 03:03:39.694 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:39.734 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:03:39.734 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:03:39.734 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:39.734 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:03:39.734 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:39.734 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:03:39.734 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:39.734 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:39.734 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:03:39.744 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:03:39.884 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:03:39.884 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:03:39.884 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:39.994 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:03:39.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:03:40.004 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:40.004 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:40.004 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:03:40.004 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:40.004 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:03:40.074 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:40.074 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:40.074 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28792 150' command took 2 ms to send, 1317 ms to get response, and 1328 ms overall
17-03-18 03:03:40.074 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:03:40.074 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.131000392590742. ------
17-03-18 03:03:40.084 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:40.084 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13763 mm
17-03-18 03:03:40.084 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:40.084 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:40.084 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:03:40.084 -07 000000561 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:03:40.084 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 30065, sync = True, waitForSettling = False)
17-03-18 03:03:40.084 -07 000000629 INF: Z Motor: Moving to -0.137629 mm, started at -0.131000 mm, distance = -6.63 um
17-03-18 03:03:40.094 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:40.094 -07 000000629 INF: FPGA: Xmit ZDACW 30065\n [Z Motor]
17-03-18 03:03:40.094 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:03:40.104 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:40.104 -07 000000629 INF: FPGA: 'ZDACW 30065' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:03:40.104 -07 000000590 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:03:40.114 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:03:40.114 -07 000000561 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:40.114 -07 000000561 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:40.114 -07 000000561 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:03:40.114 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:03:40.124 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:40.124 -07 000000626 INF: FPGA: Recv ZDACR 30065
17-03-18 03:03:40.134 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:40.134 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:40.134 -07 000000629 INF: Z Motor: MoveAbsStepped took 43 ms (did NOT wait for settling yet))
17-03-18 03:03:40.314 -07 000000430 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:03:40.314 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 4 ms to send, 196 ms to get response, and 226 ms overall
17-03-18 03:03:40.374 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:03:40.374 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:03:40.374 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:40.384 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:03:40.384 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:03:40.384 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:40.384 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:40.384 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:40.384 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 498 ms.
17-03-18 03:03:40.384 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:03:40.504 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:03:40.504 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall
17-03-18 03:03:40.554 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:40.564 -07 000000502 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:03:40.564 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:40.564 -07 000000561 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:40.564 -07 000000561 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:03:40.564 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.844 mm, average velocity = 2.131 mm/sec
17-03-18 03:03:41.514 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:41.514 -07 000000462 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:03:41.524 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:41.524 -07 000000561 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:41.534 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:41.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:41.554 -07 000000561 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:41.554 -07 000000561 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:03:41.554 -07 000000561 INF: Y Motor: Moved to 65.7144 after 1465 ms (table move)
17-03-18 03:03:41.554 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137629 mm (DAC = 30065)
17-03-18 03:03:41.554 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.554 -07 000000502 INF: FPGA: Recv ZSGSRD 30714
17-03-18 03:03:41.564 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:41.564 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.564 -07 000000462 INF: FPGA: Recv ZSGSRD 30710
17-03-18 03:03:41.574 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.574 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.574 -07 000000512 INF: FPGA: Recv ZSGSRD 30721
17-03-18 03:03:41.584 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.584 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.584 -07 000000590 INF: FPGA: Recv ZSGSRD 30710
17-03-18 03:03:41.594 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.594 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.594 -07 000000618 INF: FPGA: Recv ZSGSRD 30714
17-03-18 03:03:41.604 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.604 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.604 -07 000000576 INF: FPGA: Recv ZSGSRD 30712
17-03-18 03:03:41.614 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.614 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.614 -07 000000430 INF: FPGA: Recv ZSGSRD 30716
17-03-18 03:03:41.624 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:41.624 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.624 -07 000000501 INF: FPGA: Recv ZSGSRD 30712
17-03-18 03:03:41.634 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.634 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.634 -07 000000618 INF: FPGA: Recv ZSGSRD 30717
17-03-18 03:03:41.644 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.644 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:41.644 -07 000000590 INF: FPGA: Recv ZSGSRD 30719
17-03-18 03:03:41.654 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.654 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:41.654 -07 000000629 INF: FPGA: Recv ZPIEZORD 26529
17-03-18 03:03:41.664 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:41.664 -07 000000424 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.588 V. Piezo Error = -9.2 V.
17-03-18 03:03:41.664 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.6 um, Read 10 ADC samples: Avg = 30714 (-136.8 uncal um), Error = 0.8 uncal um, Median = 30714 (-136.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30710 (-136.8 uncal um), Max = 30721 (-136.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:03:41.664 -07 000000424 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30714, posNoise = 7, negNoise = 4
17-03-18 03:03:41.664 -07 000000424 INF: Z Motor: After move to -0.137629, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:41.664 -07 000000424 INF: Z Motor: Settle wait time = 1468 ms, measure time = 105 ms (allowed 150 ms), total time = 1573 ms
17-03-18 03:03:41.664 -07 000000424 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:41.714 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1626 ms
17-03-18 03:03:41.714 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:41.714 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:41.714 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:41.714 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:41.714 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:03:41.714 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:41.714 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:41.714 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:41.714 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:03:41.714 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:41.714 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:03:41.734 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 03:03:41.734 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 03:03:41.734 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:03:41.774 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:03:42.074 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:03:42.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:03:42.074 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:03:42.074 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) start.
17-03-18 03:03:42.114 -07 000000430 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:03:42.114 -07 000000591 INF: FPGA: Recv CAMSNAP
17-03-18 03:03:42.114 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 377 ms to get response, and 384 ms overall
17-03-18 03:03:42.204 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:03:42.204 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:42.204 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:03:42.204 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:03:42.314 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:42.314 -07 000000606 INF: Autofocus start
17-03-18 03:03:42.314 -07 000000606 INF: MeasureProfile start
17-03-18 03:03:42.314 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:42.324 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:42.324 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:03:42.324 -07 000000606 INF: MeasureProfile done
17-03-18 03:03:42.324 -07 000000606 INF: X=32  Z correction [um]=0.1299841
17-03-18 03:03:42.324 -07 000000606 INF: Autofocus finished
17-03-18 03:03:42.524 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:03:42.524 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:03:42.524 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.137636603733181. ----------
17-03-18 03:03:42.524 -07 000000610 INF: Cycle	107	Tile	8	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:42.534 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28606, sync = True, waitForSettling = True)
17-03-18 03:03:42.534 -07 000000610 INF: Z Motor: Moving to -0.130950 mm, started at -0.137637 mm, distance = 6.69 um
17-03-18 03:03:42.534 -07 000000610 INF: FPGA: Xmit ZDACW 28606\n [Z Motor]
17-03-18 03:03:42.534 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:03:42.544 -07 000000610 INF: FPGA: 'ZDACW 28606' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:42.544 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:42.544 -07 000000444 INF: FPGA: Recv ZDACR 28606
17-03-18 03:03:42.554 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.554 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:42.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.704 -07 000000591 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:03:42.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:42.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.714 -07 000000629 INF: FPGA: Recv ZSGSRD 29673
17-03-18 03:03:42.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.724 -07 000000424 INF: FPGA: Recv ZSGSRD 29678
17-03-18 03:03:42.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.734 -07 000000618 INF: FPGA: Recv ZSGSRD 29671
17-03-18 03:03:42.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.744 -07 000000576 INF: FPGA: Recv ZSGSRD 29666
17-03-18 03:03:42.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.754 -07 000000591 INF: FPGA: Recv ZSGSRD 29682
17-03-18 03:03:42.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.764 -07 000000430 INF: FPGA: Recv ZSGSRD 29675
17-03-18 03:03:42.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.774 -07 000000455 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:03:42.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.784 -07 000000606 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:03:42.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:42.794 -07 000000444 INF: FPGA: Recv ZSGSRD 29669
17-03-18 03:03:42.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.804 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:42.804 -07 000000590 INF: FPGA: Recv ZPIEZORD 25174
17-03-18 03:03:42.814 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:42.814 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.365 V. Piezo Error = -9.9 V.
17-03-18 03:03:42.814 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29674 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29674 (-130.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29666 (-130.1 uncal um), Max = 29682 (-130.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:42.814 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29674, posNoise = 8, negNoise = 8
17-03-18 03:03:42.814 -07 000000610 INF: Z Motor: After move to -0.130950, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:42.814 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:03:42.814 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:42.814 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:42.814 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:42.814 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:42.814 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:42.814 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:42.814 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:42.814 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:42.814 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:03:42.814 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:42.814 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:03:42.814 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:42.824 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:42.824 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:42.824 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:42.824 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:42.834 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:03:42.834 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:03:42.834 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:03:42.834 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:03:42.844 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28783 150\n [Camera]
17-03-18 03:03:43.034 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:43.444 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:43.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:43.444 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:43.444 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:43.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:43.444 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:43.444 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:43.444 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:03:43.444 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:43.444 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:03:43.634 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28783 786
17-03-18 03:03:43.784 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:43.814 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:03:43.814 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:03:43.814 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:43.824 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:03:43.824 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:03:43.824 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:43.824 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:43.824 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:03:43.824 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:43.834 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:03:43.974 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:43.974 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:43.974 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:43.974 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:43.984 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:43.984 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-18 03:03:43.984 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:43.984 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:43.984 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:43.984 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-18 03:03:44.164 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:03:44.164 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:44.164 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28783 150' command took 2 ms to send, 1318 ms to get response, and 1328 ms overall
17-03-18 03:03:44.174 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131284
17-03-18 03:03:44.174 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13128 mm
17-03-18 03:03:44.174 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:44.184 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 28679, sync = True, waitForSettling = False)
17-03-18 03:03:44.184 -07 000000626 INF: Z Motor: Moving to -0.131284 mm, started at -0.130955 mm, distance = -0.33 um
17-03-18 03:03:44.184 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:03:44.184 -07 000000512 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 03:03:44.184 -07 000000626 INF: FPGA: Xmit ZDACW 28679\n [Z Motor]
17-03-18 03:03:44.184 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:03:44.194 -07 000000626 INF: FPGA: 'ZDACW 28679' command took 1 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:44.194 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:44.194 -07 000000455 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:03:44.204 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:03:44.204 -07 000000512 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:44.204 -07 000000512 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:44.204 -07 000000512 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:03:44.214 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:44.214 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.962185,
17-03-18 03:03:44.214 -07 000000461 INF: FPGA: Recv ZDACR 28679
17-03-18 03:03:44.224 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:44.224 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:44.224 -07 000000626 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:03:44.364 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:03:44.364 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:03:44.364 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:44.374 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:03:44.374 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:03:44.374 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:44.374 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:44.374 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:44.374 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:03:44.374 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:03:44.594 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:03:44.594 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 251 ms to get response, and 397 ms overall
17-03-18 03:03:44.644 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:44.644 -07 000000618 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:03:44.654 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:44.654 -07 000000512 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:44.654 -07 000000512 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:03:44.654 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec
17-03-18 03:03:45.604 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:45.604 -07 000000444 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:03:45.614 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:45.614 -07 000000512 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:45.644 -07 000000512 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:45.644 -07 000000512 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:45.644 -07 000000512 INF: Y Motor: Moved to 66.5391 after 1457 ms (table move)
17-03-18 03:03:45.644 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131284 mm (DAC = 28679)
17-03-18 03:03:45.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.644 -07 000000576 INF: FPGA: Recv ZSGSRD 29728
17-03-18 03:03:45.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:03:45.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.654 -07 000000430 INF: FPGA: Recv ZSGSRD 29730
17-03-18 03:03:45.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.664 -07 000000591 INF: FPGA: Recv ZSGSRD 29728
17-03-18 03:03:45.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.674 -07 000000424 INF: FPGA: Recv ZSGSRD 29729
17-03-18 03:03:45.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.684 -07 000000579 INF: FPGA: Recv ZSGSRD 29717
17-03-18 03:03:45.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.694 -07 000000590 INF: FPGA: Recv ZSGSRD 29718
17-03-18 03:03:45.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.704 -07 000000618 INF: FPGA: Recv ZSGSRD 29727
17-03-18 03:03:45.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.714 -07 000000569 INF: FPGA: Recv ZSGSRD 29724
17-03-18 03:03:45.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.724 -07 000000629 INF: FPGA: Recv ZSGSRD 29721
17-03-18 03:03:45.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.734 -07 000000501 INF: FPGA: Recv ZSGSRD 29730
17-03-18 03:03:45.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.744 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:45.744 -07 000000461 INF: FPGA: Recv ZPIEZORD 25291
17-03-18 03:03:45.754 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.754 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.7 V.
17-03-18 03:03:45.754 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29725 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29728 (-130.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29717 (-130.4 uncal um), Max = 29730 (-130.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:45.754 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29725, posNoise = 5, negNoise = 8
17-03-18 03:03:45.754 -07 000000610 INF: Z Motor: After move to -0.131284, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:45.754 -07 000000610 INF: Z Motor: Settle wait time = 1460 ms, measure time = 106 ms (allowed 150 ms), total time = 1566 ms
17-03-18 03:03:45.754 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:45.804 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1624 ms
17-03-18 03:03:45.804 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:45.804 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.131283057924979. ----------
17-03-18 03:03:45.804 -07 000000610 INF: Cycle	107	Tile	9	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:45.804 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28502, sync = True, waitForSettling = True)
17-03-18 03:03:45.804 -07 000000610 INF: Z Motor: Moving to -0.130474 mm, started at -0.131283 mm, distance = 0.81 um
17-03-18 03:03:45.804 -07 000000610 INF: FPGA: Xmit ZDACW 28502\n [Z Motor]
17-03-18 03:03:45.814 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:03:45.814 -07 000000610 INF: FPGA: 'ZDACW 28502' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:45.814 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:45.814 -07 000000462 INF: FPGA: Recv ZDACR 28502
17-03-18 03:03:45.824 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.824 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:45.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.974 -07 000000590 INF: FPGA: Recv ZSGSRD 29604
17-03-18 03:03:45.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:45.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.984 -07 000000467 INF: FPGA: Recv ZSGSRD 29601
17-03-18 03:03:45.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:45.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:45.994 -07 000000606 INF: FPGA: Recv ZSGSRD 29606
17-03-18 03:03:46.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.004 -07 000000629 INF: FPGA: Recv ZSGSRD 29596
17-03-18 03:03:46.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.014 -07 000000462 INF: FPGA: Recv ZSGSRD 29596
17-03-18 03:03:46.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.024 -07 000000590 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:03:46.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.034 -07 000000444 INF: FPGA: Recv ZSGSRD 29597
17-03-18 03:03:46.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.044 -07 000000569 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:03:46.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.054 -07 000000618 INF: FPGA: Recv ZSGSRD 29598
17-03-18 03:03:46.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:46.064 -07 000000579 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:03:46.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:46.074 -07 000000424 INF: FPGA: Recv ZPIEZORD 25116
17-03-18 03:03:46.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:46.084 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.349 V. Piezo Error = -9.8 V.
17-03-18 03:03:46.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29601 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29602 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29596 (-129.7 uncal um), Max = 29606 (-129.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:03:46.084 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29601, posNoise = 5, negNoise = 5
17-03-18 03:03:46.084 -07 000000610 INF: Z Motor: After move to -0.130474, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:46.084 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:03:46.084 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:46.084 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:46.084 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:46.084 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:46.084 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:46.084 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:46.084 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:03:46.084 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:46.084 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:46.084 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:46.084 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:46.084 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:46.094 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:46.094 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:46.094 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:03:46.094 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:46.104 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:03:46.104 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:03:46.104 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:03:46.104 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:03:46.104 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28679 150\n [Camera]
17-03-18 03:03:46.304 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:46.534 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:46.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:46.704 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:46.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:46.704 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:46.714 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:46.714 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:03:46.714 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:46.714 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:46.714 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:46.714 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:46.714 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:03:46.894 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28679 786
17-03-18 03:03:47.044 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:47.094 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:03:47.094 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:03:47.094 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:47.094 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:03:47.094 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:03:47.094 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:47.094 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:47.104 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:03:47.104 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:47.104 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:03:47.244 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:47.244 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:47.244 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:47.244 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:47.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:47.244 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:47.244 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:47.244 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:03:47.244 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:47.244 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:03:47.434 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:47.434 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:47.434 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28679 150' command took 2 ms to send, 1324 ms to get response, and 1329 ms overall
17-03-18 03:03:47.434 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131398
17-03-18 03:03:47.434 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13140 mm
17-03-18 03:03:47.434 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:47.434 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:03:47.434 -07 000000455 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:03:47.434 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:47.434 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28704, sync = True, waitForSettling = False)
17-03-18 03:03:47.434 -07 000000461 INF: Z Motor: Moving to -0.131398 mm, started at -0.130486 mm, distance = -0.91 um
17-03-18 03:03:47.444 -07 000000461 INF: FPGA: Xmit ZDACW 28704\n [Z Motor]
17-03-18 03:03:47.444 -07 000000590 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:03:47.444 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:03:47.444 -07 000000455 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:47.444 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:03:47.444 -07 000000455 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:47.444 -07 000000455 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:03:47.454 -07 000000461 INF: FPGA: 'ZDACW 28704' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:47.454 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:47.454 -07 000000561 INF: FPGA: Recv ZDACR 28704
17-03-18 03:03:47.464 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:47.464 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:47.464 -07 000000461 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:03:47.624 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:03:47.624 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:03:47.624 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:47.624 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:03:47.624 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:47.624 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:03:47.624 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:47.634 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:47.634 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:03:47.634 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:03:47.834 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:03:47.834 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 390 ms overall
17-03-18 03:03:47.884 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:47.884 -07 000000502 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:03:47.894 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:47.894 -07 000000455 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:47.894 -07 000000455 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:03:47.894 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.844 mm, average velocity = 2.157 mm/sec
17-03-18 03:03:48.844 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:48.844 -07 000000591 INF: FPGA: Recv YRDPOS 137979
17-03-18 03:03:48.854 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:48.854 -07 000000455 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:48.874 -07 000000455 INF: Y Motor: After move to 67.382607, error = -0.010048, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:48.874 -07 000000455 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:03:48.874 -07 000000455 INF: Y Motor: Moved to 67.3726 after 1439 ms (table move)
17-03-18 03:03:48.884 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131398 mm (DAC = 28704)
17-03-18 03:03:48.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.884 -07 000000626 INF: FPGA: Recv ZSGSRD 29749
17-03-18 03:03:48.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:48.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.894 -07 000000502 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:03:48.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.904 -07 000000467 INF: FPGA: Recv ZSGSRD 29746
17-03-18 03:03:48.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.914 -07 000000461 INF: FPGA: Recv ZSGSRD 29744
17-03-18 03:03:48.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.924 -07 000000576 INF: FPGA: Recv ZSGSRD 29744
17-03-18 03:03:48.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.934 -07 000000626 INF: FPGA: Recv ZSGSRD 29742
17-03-18 03:03:48.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.944 -07 000000502 INF: FPGA: Recv ZSGSRD 29743
17-03-18 03:03:48.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.954 -07 000000467 INF: FPGA: Recv ZSGSRD 29739
17-03-18 03:03:48.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.964 -07 000000579 INF: FPGA: Recv ZSGSRD 29745
17-03-18 03:03:48.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:48.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:48.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29750
17-03-18 03:03:48.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:49.014 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:49.014 -07 000000467 INF: FPGA: Recv ZPIEZORD 25304
17-03-18 03:03:49.024 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:49.024 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.380 V. Piezo Error = -9.7 V.
17-03-18 03:03:49.024 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29744 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29744 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29738 (-130.6 uncal um), Max = 29750 (-130.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:49.024 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29744, posNoise = 6, negNoise = 6
17-03-18 03:03:49.024 -07 000000610 INF: Z Motor: After move to -0.131398, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:49.024 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 138 ms (allowed 150 ms), total time = 1580 ms
17-03-18 03:03:49.024 -07 000000610 INF: Z Motor: Waiting extra 12 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:49.044 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:03:49.044 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:49.044 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37255859375, Z-position -0.131405117955673. ----------
17-03-18 03:03:49.044 -07 000000610 INF: Cycle	107	Tile	10	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:49.044 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28527, sync = True, waitForSettling = True)
17-03-18 03:03:49.044 -07 000000610 INF: Z Motor: Moving to -0.130588 mm, started at -0.131405 mm, distance = 0.82 um
17-03-18 03:03:49.044 -07 000000610 INF: FPGA: Xmit ZDACW 28527\n [Z Motor]
17-03-18 03:03:49.044 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:03:49.054 -07 000000610 INF: FPGA: 'ZDACW 28527' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:49.054 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:49.054 -07 000000444 INF: FPGA: Recv ZDACR 28527
17-03-18 03:03:49.064 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.064 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:49.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.214 -07 000000512 INF: FPGA: Recv ZSGSRD 29614
17-03-18 03:03:49.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:49.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.224 -07 000000606 INF: FPGA: Recv ZSGSRD 29626
17-03-18 03:03:49.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.234 -07 000000424 INF: FPGA: Recv ZSGSRD 29623
17-03-18 03:03:49.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.244 -07 000000569 INF: FPGA: Recv ZSGSRD 29619
17-03-18 03:03:49.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.254 -07 000000561 INF: FPGA: Recv ZSGSRD 29613
17-03-18 03:03:49.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.264 -07 000000462 INF: FPGA: Recv ZSGSRD 29617
17-03-18 03:03:49.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.274 -07 000000576 INF: FPGA: Recv ZSGSRD 29622
17-03-18 03:03:49.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.284 -07 000000626 INF: FPGA: Recv ZSGSRD 29618
17-03-18 03:03:49.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.294 -07 000000461 INF: FPGA: Recv ZSGSRD 29618
17-03-18 03:03:49.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:49.304 -07 000000444 INF: FPGA: Recv ZSGSRD 29621
17-03-18 03:03:49.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.314 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:49.314 -07 000000579 INF: FPGA: Recv ZPIEZORD 25115
17-03-18 03:03:49.324 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:49.324 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.353 V. Piezo Error = -9.9 V.
17-03-18 03:03:49.324 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29619 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29618 (-129.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29613 (-129.8 uncal um), Max = 29626 (-129.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:49.324 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29619, posNoise = 7, negNoise = 6
17-03-18 03:03:49.324 -07 000000610 INF: Z Motor: After move to -0.130588, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:49.324 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:49.324 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:49.324 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:49.324 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:49.324 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:49.324 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:49.324 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:49.324 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:49.324 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:49.324 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:03:49.324 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:49.324 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:49.324 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:49.334 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:49.334 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:49.334 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:49.334 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:49.344 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:03:49.344 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:03:49.344 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:03:49.344 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:03:49.344 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28704 150\n [Camera]
17-03-18 03:03:49.544 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:49.704 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.975845,
17-03-18 03:03:49.944 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:49.944 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:49.954 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:49.954 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:49.954 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:03:49.954 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:49.954 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:49.954 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:49.954 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:49.954 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:03:50.144 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28704 786
17-03-18 03:03:50.294 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:50.334 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:03:50.334 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:03:50.334 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:50.334 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:03:50.334 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:03:50.334 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:50.344 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:50.344 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:03:50.344 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:03:50.354 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:03:50.484 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:50.484 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:50.484 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:50.484 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:50.484 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:03:50.494 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:50.494 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:50.494 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:50.494 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:50.494 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:03:50.674 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:50.674 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:50.674 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28704 150' command took 2 ms to send, 1317 ms to get response, and 1328 ms overall
17-03-18 03:03:50.674 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130869
17-03-18 03:03:50.674 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13087 mm
17-03-18 03:03:50.674 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:50.684 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:03:50.684 -07 000000629 INF: Y Motor: Moving to 68.2126 mm, started at 67.3726 mm, delta = 0.8400 mm
17-03-18 03:03:50.684 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:50.684 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28588, sync = True, waitForSettling = False)
17-03-18 03:03:50.684 -07 000000606 INF: Z Motor: Moving to -0.130867 mm, started at -0.130602 mm, distance = -0.27 um
17-03-18 03:03:50.684 -07 000000569 INF: FPGA: Recv YRDPOS 137979
17-03-18 03:03:50.694 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:50.694 -07 000000606 INF: FPGA: Xmit ZDACW 28588\n [Z Motor]
17-03-18 03:03:50.694 -07 000000629 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:50.694 -07 000000629 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:50.694 -07 000000629 INF: Y Motor: Moving 1344 steps-22
17-03-18 03:03:50.694 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:03:50.704 -07 000000606 INF: FPGA: 'ZDACW 28588' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:03:50.704 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:50.704 -07 000000579 INF: FPGA: Recv ZDACR 28588
17-03-18 03:03:50.714 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:50.714 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:50.714 -07 000000606 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 03:03:50.864 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:03:50.864 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:03:50.864 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:50.874 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:50.874 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:03:50.874 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:50.874 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:50.874 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:03:50.874 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:50.884 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:03:51.084 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:03:51.084 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 03:03:51.134 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:51.144 -07 000000626 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:03:51.144 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:03:51.144 -07 000000629 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:51.144 -07 000000629 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-18 03:03:51.144 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-18 03:03:51.534 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:51.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:52.094 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:52.094 -07 000000444 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:03:52.104 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.104 -07 000000629 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:52.124 -07 000000629 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:52.124 -07 000000629 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:52.124 -07 000000629 INF: Y Motor: Moved to 68.2056 after 1444 ms (table move)
17-03-18 03:03:52.124 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130867 mm (DAC = 28588)
17-03-18 03:03:52.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.134 -07 000000467 INF: FPGA: Recv ZSGSRD 29669
17-03-18 03:03:52.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 03:03:52.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.134 -07 000000430 INF: FPGA: Recv ZSGSRD 29662
17-03-18 03:03:52.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:52.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.144 -07 000000502 INF: FPGA: Recv ZSGSRD 29667
17-03-18 03:03:52.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.154 -07 000000444 INF: FPGA: Recv ZSGSRD 29663
17-03-18 03:03:52.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.164 -07 000000590 INF: FPGA: Recv ZSGSRD 29662
17-03-18 03:03:52.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:03:52.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.174 -07 000000626 INF: FPGA: Recv ZSGSRD 29668
17-03-18 03:03:52.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.184 -07 000000569 INF: FPGA: Recv ZSGSRD 29662
17-03-18 03:03:52.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.194 -07 000000606 INF: FPGA: Recv ZSGSRD 29658
17-03-18 03:03:52.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.204 -07 000000569 INF: FPGA: Recv ZSGSRD 29657
17-03-18 03:03:52.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.214 -07 000000606 INF: FPGA: Recv ZSGSRD 29664
17-03-18 03:03:52.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:52.224 -07 000000455 INF: FPGA: Recv ZPIEZORD 25182
17-03-18 03:03:52.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.234 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.362 V. Piezo Error = -9.8 V.
17-03-18 03:03:52.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29663 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29662 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29657 (-130.1 uncal um), Max = 29669 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:52.234 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29663, posNoise = 6, negNoise = 6
17-03-18 03:03:52.234 -07 000000610 INF: Z Motor: After move to -0.130867, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:52.234 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 101 ms (allowed 150 ms), total time = 1547 ms
17-03-18 03:03:52.234 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:52.284 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 03:03:52.284 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:52.284 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.13088475677219. ----------
17-03-18 03:03:52.284 -07 000000610 INF: Cycle	107	Tile	11	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:52.284 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28412, sync = True, waitForSettling = True)
17-03-18 03:03:52.284 -07 000000610 INF: Z Motor: Moving to -0.130062 mm, started at -0.130885 mm, distance = 0.82 um
17-03-18 03:03:52.284 -07 000000610 INF: FPGA: Xmit ZDACW 28412\n [Z Motor]
17-03-18 03:03:52.284 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:03:52.294 -07 000000610 INF: FPGA: 'ZDACW 28412' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:52.294 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:52.294 -07 000000626 INF: FPGA: Recv ZDACR 28412
17-03-18 03:03:52.304 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.304 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:52.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.454 -07 000000462 INF: FPGA: Recv ZSGSRD 29544
17-03-18 03:03:52.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:52.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.464 -07 000000430 INF: FPGA: Recv ZSGSRD 29542
17-03-18 03:03:52.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.474 -07 000000455 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:03:52.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.484 -07 000000561 INF: FPGA: Recv ZSGSRD 29538
17-03-18 03:03:52.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.494 -07 000000501 INF: FPGA: Recv ZSGSRD 29534
17-03-18 03:03:52.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.504 -07 000000591 INF: FPGA: Recv ZSGSRD 29541
17-03-18 03:03:52.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.514 -07 000000579 INF: FPGA: Recv ZSGSRD 29530
17-03-18 03:03:52.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.524 -07 000000455 INF: FPGA: Recv ZSGSRD 29533
17-03-18 03:03:52.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.534 -07 000000461 INF: FPGA: Recv ZSGSRD 29535
17-03-18 03:03:52.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:52.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29539
17-03-18 03:03:52.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.554 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:52.554 -07 000000606 INF: FPGA: Recv ZPIEZORD 25057
17-03-18 03:03:52.564 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:52.564 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.335 V. Piezo Error = -9.8 V.
17-03-18 03:03:52.564 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29537 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29538 (-129.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29530 (-129.3 uncal um), Max = 29544 (-129.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:03:52.564 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29537, posNoise = 7, negNoise = 7
17-03-18 03:03:52.564 -07 000000610 INF: Z Motor: After move to -0.130062, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:52.564 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:03:52.564 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:52.564 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:52.564 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:52.564 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:52.564 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:52.564 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:52.564 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:52.564 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:52.564 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:52.564 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:52.564 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:52.564 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:52.564 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:52.564 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:52.574 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:52.574 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:52.584 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 03:03:52.584 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:03:52.584 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:03:52.584 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:03:52.584 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28588 150\n [Camera]
17-03-18 03:03:52.784 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:53.194 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:53.194 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:53.194 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:53.194 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:53.194 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:03:53.194 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:53.194 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:53.194 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:53.194 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:53.194 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:03:53.384 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28588 786
17-03-18 03:03:53.534 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:53.564 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:03:53.564 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:03:53.564 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:53.574 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:03:53.574 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:03:53.574 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:53.574 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:53.574 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:03:53.574 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:03:53.584 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:03:53.724 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:53.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:53.724 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:53.854 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:53.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:53.854 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:53.854 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:53.854 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:03:53.854 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:53.854 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:03:53.914 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:53.914 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:53.914 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28588 150' command took 2 ms to send, 1316 ms to get response, and 1328 ms overall
17-03-18 03:03:53.914 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:03:53.914 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.130075306042328. ------
17-03-18 03:03:53.924 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:53.924 -07 000000569 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13678 mm
17-03-18 03:03:53.924 -07 000000569 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:53.924 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:53.924 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:03:53.924 -07 000000467 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 03:03:53.924 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29879, sync = True, waitForSettling = False)
17-03-18 03:03:53.924 -07 000000626 INF: Z Motor: Moving to -0.136777 mm, started at -0.130075 mm, distance = -6.70 um
17-03-18 03:03:53.934 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:53.934 -07 000000626 INF: FPGA: Xmit ZDACW 29879\n [Z Motor]
17-03-18 03:03:53.934 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:03:53.944 -07 000000626 INF: FPGA: 'ZDACW 29879' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:53.944 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:53.944 -07 000000502 INF: FPGA: Recv ZDACR 29879
17-03-18 03:03:53.954 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:53.954 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:53.954 -07 000000626 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:03:53.954 -07 000000512 INF: FPGA: Recv YRDPOS 139685
17-03-18 03:03:53.964 -07 000000561 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:03:53.964 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 31 ms overall
17-03-18 03:03:53.964 -07 000000467 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:53.964 -07 000000467 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:53.964 -07 000000467 INF: Y Motor: Moving 1339 steps-14
17-03-18 03:03:53.974 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:54.164 -07 000000502 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:03:54.164 -07 000000561 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 232 ms overall
17-03-18 03:03:54.234 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:03:54.234 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:03:54.234 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:54.244 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:54.244 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:03:54.244 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:03:54.244 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:54.244 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:54.244 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 522 ms.
17-03-18 03:03:54.244 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:03:54.344 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:03:54.344 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 03:03:54.404 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:54.404 -07 000000618 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:03:54.414 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:54.414 -07 000000467 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:54.414 -07 000000467 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:03:54.414 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.837 mm, average velocity = 2.157 mm/sec
17-03-18 03:03:55.064 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.96762,
17-03-18 03:03:55.364 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:55.364 -07 000000430 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:03:55.374 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:03:55.374 -07 000000467 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:55.394 -07 000000467 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:55.394 -07 000000467 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:55.394 -07 000000467 INF: Y Motor: Moved to 69.0273 after 1470 ms (table move)
17-03-18 03:03:55.404 -07 000000569 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136777 mm (DAC = 29879)
17-03-18 03:03:55.404 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.404 -07 000000591 INF: FPGA: Recv ZSGSRD 30577
17-03-18 03:03:55.414 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:55.414 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.414 -07 000000430 INF: FPGA: Recv ZSGSRD 30584
17-03-18 03:03:55.424 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.424 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.424 -07 000000501 INF: FPGA: Recv ZSGSRD 30580
17-03-18 03:03:55.434 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.434 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.434 -07 000000629 INF: FPGA: Recv ZSGSRD 30578
17-03-18 03:03:55.444 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.444 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.444 -07 000000462 INF: FPGA: Recv ZSGSRD 30577
17-03-18 03:03:55.454 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.454 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.454 -07 000000501 INF: FPGA: Recv ZSGSRD 30583
17-03-18 03:03:55.464 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.464 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.464 -07 000000629 INF: FPGA: Recv ZSGSRD 30578
17-03-18 03:03:55.474 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.474 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.474 -07 000000512 INF: FPGA: Recv ZSGSRD 30580
17-03-18 03:03:55.484 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.484 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.484 -07 000000606 INF: FPGA: Recv ZSGSRD 30589
17-03-18 03:03:55.494 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.494 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:55.494 -07 000000579 INF: FPGA: Recv ZSGSRD 30583
17-03-18 03:03:55.504 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.504 -07 000000569 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:55.504 -07 000000462 INF: FPGA: Recv ZPIEZORD 26414
17-03-18 03:03:55.514 -07 000000569 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:55.514 -07 000000569 INF: Z Motor: Piezo is near 36.4 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.559 V. Piezo Error = -9.2 V.
17-03-18 03:03:55.514 -07 000000569 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.8 um, Read 10 ADC samples: Avg = 30581 (-136.0 uncal um), Error = 0.8 uncal um, Median = 30580 (-136.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30577 (-136.0 uncal um), Max = 30589 (-136.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:03:55.514 -07 000000569 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30581, posNoise = 8, negNoise = 4
17-03-18 03:03:55.514 -07 000000569 INF: Z Motor: After move to -0.136777, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:55.514 -07 000000569 INF: Z Motor: Settle wait time = 1472 ms, measure time = 109 ms (allowed 150 ms), total time = 1581 ms
17-03-18 03:03:55.514 -07 000000569 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:55.564 -07 000000569 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1636 ms
17-03-18 03:03:55.564 -07 000000569 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:55.564 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:55.564 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:55.564 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:55.564 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:55.564 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:03:55.564 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:55.564 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:03:55.564 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:03:55.574 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:55.574 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:03:55.584 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:03:55.584 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:03:55.584 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:03:55.634 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:03:55.934 -07 000000606 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:03:55.934 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:03:55.934 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:03:55.934 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) start.
17-03-18 03:03:55.974 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:03:55.974 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-18 03:03:55.974 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 387 ms overall
17-03-18 03:03:56.064 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:03:56.064 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:56.064 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:03:56.064 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:03:56.074 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:03:56.074 -07 000000579 INF: Autofocus start
17-03-18 03:03:56.074 -07 000000579 INF: MeasureProfile start
17-03-18 03:03:56.074 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:03:56.084 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:03:56.084 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:03:56.084 -07 000000579 INF: MeasureProfile done
17-03-18 03:03:56.084 -07 000000579 INF: X=-3  Z correction [um]=-0.01800644
17-03-18 03:03:56.084 -07 000000579 INF: Autofocus finished
17-03-18 03:03:56.284 -07 000000591 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:03:56.284 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:03:56.284 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.136782183518327. ----------
17-03-18 03:03:56.284 -07 000000610 INF: Cycle	107	Tile	12	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:56.304 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28388, sync = True, waitForSettling = True)
17-03-18 03:03:56.304 -07 000000610 INF: Z Motor: Moving to -0.129952 mm, started at -0.136782 mm, distance = 6.83 um
17-03-18 03:03:56.304 -07 000000610 INF: FPGA: Xmit ZDACW 28388\n [Z Motor]
17-03-18 03:03:56.304 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:03:56.314 -07 000000610 INF: FPGA: 'ZDACW 28388' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:03:56.314 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:56.314 -07 000000606 INF: FPGA: Recv ZDACR 28388
17-03-18 03:03:56.324 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.324 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:56.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.474 -07 000000462 INF: FPGA: Recv ZSGSRD 29517
17-03-18 03:03:56.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.484 -07 000000618 INF: FPGA: Recv ZSGSRD 29518
17-03-18 03:03:56.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.494 -07 000000561 INF: FPGA: Recv ZSGSRD 29516
17-03-18 03:03:56.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.504 -07 000000576 INF: FPGA: Recv ZSGSRD 29522
17-03-18 03:03:56.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.514 -07 000000590 INF: FPGA: Recv ZSGSRD 29518
17-03-18 03:03:56.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.524 -07 000000512 INF: FPGA: Recv ZSGSRD 29516
17-03-18 03:03:56.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.534 -07 000000444 INF: FPGA: Recv ZSGSRD 29520
17-03-18 03:03:56.534 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:03:56.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:03:56.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.544 -07 000000467 INF: FPGA: Recv ZSGSRD 29516
17-03-18 03:03:56.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.554 -07 000000618 INF: FPGA: Recv ZSGSRD 29518
17-03-18 03:03:56.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:56.564 -07 000000561 INF: FPGA: Recv ZSGSRD 29517
17-03-18 03:03:56.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.574 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:56.574 -07 000000576 INF: FPGA: Recv ZPIEZORD 24993
17-03-18 03:03:56.584 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:56.584 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.332 V. Piezo Error = -9.9 V.
17-03-18 03:03:56.584 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29518 (-129.2 uncal um), Error = 0.8 uncal um, Median = 29518 (-129.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29516 (-129.2 uncal um), Max = 29522 (-129.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:03:56.584 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29518, posNoise = 4, negNoise = 2
17-03-18 03:03:56.584 -07 000000610 INF: Z Motor: After move to -0.129952, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:56.584 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:03:56.584 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:56.584 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:56.584 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:56.584 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:56.584 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:56.584 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:56.584 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:56.584 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:56.584 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:03:56.584 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:56.584 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:56.584 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:56.594 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:03:56.594 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:56.594 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:03:56.594 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:56.604 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:03:56.604 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:03:56.604 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:03:56.604 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:03:56.604 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28565 150\n [Camera]
17-03-18 03:03:56.804 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:03:57.204 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:03:57.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:03:57.204 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:03:57.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:03:57.204 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:57.204 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:57.204 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:57.204 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:03:57.224 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:57.224 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:03:57.394 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28565 786
17-03-18 03:03:57.544 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:03:57.584 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:03:57.584 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:03:57.584 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:57.584 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:57.594 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:03:57.594 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 03:03:57.594 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 03:03:57.594 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:57.604 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:57.604 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:03:57.744 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:03:57.744 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:03:57.744 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:03:57.744 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:03:57.744 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:03:57.744 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:03:57.754 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:03:57.754 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:03:57.754 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:03:57.754 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:03:57.934 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:03:57.934 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:03:57.934 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28565 150' command took 2 ms to send, 1322 ms to get response, and 1328 ms overall
17-03-18 03:03:57.934 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130397
17-03-18 03:03:57.934 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13040 mm
17-03-18 03:03:57.934 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:03:57.934 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:03:57.934 -07 000000626 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:03:57.934 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28485, sync = True, waitForSettling = False)
17-03-18 03:03:57.934 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:57.934 -07 000000501 INF: Z Motor: Moving to -0.130396 mm, started at -0.129953 mm, distance = -0.44 um
17-03-18 03:03:57.944 -07 000000501 INF: FPGA: Xmit ZDACW 28485\n [Z Motor]
17-03-18 03:03:57.944 -07 000000591 INF: FPGA: Recv YRDPOS 141369
17-03-18 03:03:57.944 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:03:57.944 -07 000000626 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:57.944 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:03:57.944 -07 000000626 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:03:57.944 -07 000000626 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:03:57.954 -07 000000501 INF: FPGA: 'ZDACW 28485' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:03:57.954 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:57.954 -07 000000462 INF: FPGA: Recv ZDACR 28485
17-03-18 03:03:57.964 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:03:57.964 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:57.964 -07 000000501 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:03:58.124 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:03:58.124 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:03:58.124 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:58.124 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:03:58.124 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:03:58.124 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:03:58.124 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:58.134 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:03:58.134 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:03:58.134 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:03:58.334 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:03:58.334 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-18 03:03:58.384 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:58.394 -07 000000502 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:03:58.394 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 4 ms overall
17-03-18 03:03:58.394 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:58.394 -07 000000626 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:03:58.394 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.845 mm, average velocity = 2.140 mm/sec
17-03-18 03:03:59.344 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:03:59.344 -07 000000618 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:03:59.354 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.354 -07 000000626 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:03:59.384 -07 000000626 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:03:59.384 -07 000000626 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:03:59.384 -07 000000626 INF: Y Motor: Moved to 69.8633 after 1443 ms (table move)
17-03-18 03:03:59.384 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130396 mm (DAC = 28485)
17-03-18 03:03:59.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.384 -07 000000424 INF: FPGA: Recv ZSGSRD 29588
17-03-18 03:03:59.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:59.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.394 -07 000000502 INF: FPGA: Recv ZSGSRD 29594
17-03-18 03:03:59.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.414 -07 000000461 INF: FPGA: Recv ZSGSRD 29592
17-03-18 03:03:59.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:59.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.424 -07 000000444 INF: FPGA: Recv ZSGSRD 29586
17-03-18 03:03:59.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.434 -07 000000626 INF: FPGA: Recv ZSGSRD 29581
17-03-18 03:03:59.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.444 -07 000000424 INF: FPGA: Recv ZSGSRD 29586
17-03-18 03:03:59.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.454 -07 000000561 INF: FPGA: Recv ZSGSRD 29586
17-03-18 03:03:59.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.464 -07 000000455 INF: FPGA: Recv ZSGSRD 29590
17-03-18 03:03:59.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.474 -07 000000626 INF: FPGA: Recv ZSGSRD 29591
17-03-18 03:03:59.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.484 -07 000000629 INF: FPGA: Recv ZSGSRD 29592
17-03-18 03:03:59.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:59.494 -07 000000626 INF: FPGA: Recv ZPIEZORD 25114
17-03-18 03:03:59.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.504 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.347 V. Piezo Error = -9.8 V.
17-03-18 03:03:59.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29589 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29589 (-129.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29581 (-129.6 uncal um), Max = 29594 (-129.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:03:59.504 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29589, posNoise = 5, negNoise = 8
17-03-18 03:03:59.504 -07 000000610 INF: Z Motor: After move to -0.130396, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:59.504 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 116 ms (allowed 150 ms), total time = 1562 ms
17-03-18 03:03:59.504 -07 000000610 INF: Z Motor: Waiting extra 34 ms after reading position to reach expected total of 150 ms
17-03-18 03:03:59.544 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:03:59.544 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:03:59.544 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.1304093650737. ----------
17-03-18 03:03:59.544 -07 000000610 INF: Cycle	107	Tile	13	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:03:59.544 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28309, sync = True, waitForSettling = True)
17-03-18 03:03:59.544 -07 000000610 INF: Z Motor: Moving to -0.129590 mm, started at -0.130409 mm, distance = 0.82 um
17-03-18 03:03:59.544 -07 000000610 INF: FPGA: Xmit ZDACW 28309\n [Z Motor]
17-03-18 03:03:59.544 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:03:59.554 -07 000000610 INF: FPGA: 'ZDACW 28309' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:03:59.554 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:03:59.554 -07 000000606 INF: FPGA: Recv ZDACR 28309
17-03-18 03:03:59.564 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.564 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:03:59.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.734 -07 000000455 INF: FPGA: Recv ZSGSRD 29464
17-03-18 03:03:59.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:03:59.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.754 -07 000000576 INF: FPGA: Recv ZSGSRD 29457
17-03-18 03:03:59.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:59.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.764 -07 000000629 INF: FPGA: Recv ZSGSRD 29461
17-03-18 03:03:59.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.784 -07 000000561 INF: FPGA: Recv ZSGSRD 29463
17-03-18 03:03:59.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:59.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.804 -07 000000579 INF: FPGA: Recv ZSGSRD 29462
17-03-18 03:03:59.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:03:59.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.814 -07 000000461 INF: FPGA: Recv ZSGSRD 29460
17-03-18 03:03:59.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.824 -07 000000455 INF: FPGA: Recv ZSGSRD 29467
17-03-18 03:03:59.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.834 -07 000000462 INF: FPGA: Recv ZSGSRD 29455
17-03-18 03:03:59.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.844 -07 000000501 INF: FPGA: Recv ZSGSRD 29462
17-03-18 03:03:59.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:03:59.854 -07 000000512 INF: FPGA: Recv ZSGSRD 29461
17-03-18 03:03:59.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.864 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:03:59.864 -07 000000502 INF: FPGA: Recv ZPIEZORD 24938
17-03-18 03:03:59.874 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:03:59.874 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.320 V. Piezo Error = -9.9 V.
17-03-18 03:03:59.874 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29461 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29462 (-128.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29455 (-128.8 uncal um), Max = 29467 (-128.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:03:59.874 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29461, posNoise = 6, negNoise = 6
17-03-18 03:03:59.874 -07 000000610 INF: Z Motor: After move to -0.129590, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:03:59.874 -07 000000610 INF: Z Motor: MoveAbsStepped took 326 ms)
17-03-18 03:03:59.874 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:03:59.874 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:03:59.874 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:03:59.874 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:03:59.874 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:03:59.874 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:03:59.874 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:03:59.874 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:03:59.874 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:03:59.874 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:03:59.874 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:03:59.874 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:03:59.874 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:03:59.874 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:03:59.874 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:03:59.874 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:03:59.884 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:03:59.884 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:03:59.884 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:03:59.884 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:03:59.894 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28485 150\n [Camera]
17-03-18 03:04:00.094 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 194
17-03-18 03:04:00.424 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.026244,
17-03-18 03:04:00.544 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:04:00.544 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:04:00.544 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:04:00.544 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:04:00.544 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:00.544 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:00.554 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:00.554 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:04:00.554 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:00.554 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:04:00.684 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28485 786
17-03-18 03:04:00.834 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:04:00.924 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:04:00.924 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 03:04:00.924 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:00.924 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:00.924 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 03:04:00.924 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 03:04:00.924 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:00.934 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:00.934 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:04:00.934 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:04:01.024 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:01.024 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:01.024 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:01.034 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:01.034 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 03:04:01.034 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:01.034 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:01.034 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:01.154 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:01.154 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:04:01.214 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:04:01.224 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:01.224 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28485 150' command took 2 ms to send, 1320 ms to get response, and 1329 ms overall
17-03-18 03:04:01.224 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129524
17-03-18 03:04:01.224 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12952 mm
17-03-18 03:04:01.224 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:04:01.224 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:04:01.224 -07 000000579 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 03:04:01.224 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28294, sync = True, waitForSettling = False)
17-03-18 03:04:01.224 -07 000000576 INF: Z Motor: Moving to -0.129522 mm, started at -0.129587 mm, distance = 0.07 um
17-03-18 03:04:01.224 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:01.224 -07 000000461 INF: FPGA: Recv YRDPOS 143081
17-03-18 03:04:01.234 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:01.234 -07 000000579 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:01.234 -07 000000576 INF: FPGA: Xmit ZDACW 28294\n [Z Motor]
17-03-18 03:04:01.234 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:04:01.234 -07 000000579 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:04:01.234 -07 000000579 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:04:01.244 -07 000000576 INF: FPGA: 'ZDACW 28294' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:04:01.244 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:01.244 -07 000000444 INF: FPGA: Recv ZDACR 28294
17-03-18 03:04:01.254 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:04:01.254 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:01.254 -07 000000576 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:04:01.414 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:04:01.414 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:04:01.414 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:01.414 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:01.414 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:04:01.524 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:04:01.534 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:04:01.534 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:01.534 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:01.534 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:04:01.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:04:01.544 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms.
17-03-18 03:04:01.624 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:04:01.624 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 03:04:01.674 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:01.684 -07 000000501 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:04:01.684 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:04:01.684 -07 000000579 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:01.684 -07 000000579 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:04:01.684 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.839 mm, average velocity = 2.125 mm/sec
17-03-18 03:04:02.634 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:02.634 -07 000000629 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:04:02.644 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:02.644 -07 000000579 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:02.674 -07 000000579 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:04:02.674 -07 000000579 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:04:02.674 -07 000000579 INF: Y Motor: Moved to 70.6885 after 1446 ms (table move)
17-03-18 03:04:02.674 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129522 mm (DAC = 28294)
17-03-18 03:04:02.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.674 -07 000000461 INF: FPGA: Recv ZSGSRD 29449
17-03-18 03:04:02.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:04:02.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.684 -07 000000618 INF: FPGA: Recv ZSGSRD 29452
17-03-18 03:04:02.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.694 -07 000000626 INF: FPGA: Recv ZSGSRD 29449
17-03-18 03:04:02.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.704 -07 000000455 INF: FPGA: Recv ZSGSRD 29455
17-03-18 03:04:02.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.714 -07 000000444 INF: FPGA: Recv ZSGSRD 29450
17-03-18 03:04:02.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.724 -07 000000461 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:04:02.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.734 -07 000000569 INF: FPGA: Recv ZSGSRD 29448
17-03-18 03:04:02.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.744 -07 000000430 INF: FPGA: Recv ZSGSRD 29453
17-03-18 03:04:02.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.754 -07 000000591 INF: FPGA: Recv ZSGSRD 29453
17-03-18 03:04:02.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:02.764 -07 000000579 INF: FPGA: Recv ZSGSRD 29446
17-03-18 03:04:02.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.774 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:02.774 -07 000000512 INF: FPGA: Recv ZPIEZORD 24928
17-03-18 03:04:02.784 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.784 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.317 V. Piezo Error = -9.9 V.
17-03-18 03:04:02.784 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29451 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29450 (-128.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29446 (-128.7 uncal um), Max = 29455 (-128.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:04:02.784 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29451, posNoise = 4, negNoise = 5
17-03-18 03:04:02.784 -07 000000610 INF: Z Motor: After move to -0.129522, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:02.784 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 107 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:04:02.784 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:04:02.834 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:04:02.834 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:04:02.834 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.129522823798137. ----------
17-03-18 03:04:02.834 -07 000000610 INF: Cycle	107	Tile	14	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:04:02.834 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28118, sync = True, waitForSettling = True)
17-03-18 03:04:02.834 -07 000000610 INF: Z Motor: Moving to -0.128716 mm, started at -0.129523 mm, distance = 0.81 um
17-03-18 03:04:02.834 -07 000000610 INF: FPGA: Xmit ZDACW 28118\n [Z Motor]
17-03-18 03:04:02.834 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:04:02.844 -07 000000610 INF: FPGA: 'ZDACW 28118' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:02.844 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:02.844 -07 000000455 INF: FPGA: Recv ZDACR 28118
17-03-18 03:04:02.854 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:02.854 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:04:03.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.004 -07 000000430 INF: FPGA: Recv ZSGSRD 29328
17-03-18 03:04:03.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:03.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.014 -07 000000502 INF: FPGA: Recv ZSGSRD 29324
17-03-18 03:04:03.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.024 -07 000000430 INF: FPGA: Recv ZSGSRD 29323
17-03-18 03:04:03.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.034 -07 000000576 INF: FPGA: Recv ZSGSRD 29324
17-03-18 03:04:03.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.044 -07 000000424 INF: FPGA: Recv ZSGSRD 29328
17-03-18 03:04:03.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.054 -07 000000501 INF: FPGA: Recv ZSGSRD 29327
17-03-18 03:04:03.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.064 -07 000000461 INF: FPGA: Recv ZSGSRD 29328
17-03-18 03:04:03.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:04:03.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.074 -07 000000569 INF: FPGA: Recv ZSGSRD 29330
17-03-18 03:04:03.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.084 -07 000000590 INF: FPGA: Recv ZSGSRD 29327
17-03-18 03:04:03.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:03.094 -07 000000569 INF: FPGA: Recv ZSGSRD 29328
17-03-18 03:04:03.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:03.104 -07 000000501 INF: FPGA: Recv ZPIEZORD 24758
17-03-18 03:04:03.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:03.114 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.291 V. Piezo Error = -10.0 V.
17-03-18 03:04:03.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29327 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29328 (-128.0 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29323 (-127.9 uncal um), Max = 29330 (-128.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:04:03.114 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29327, posNoise = 3, negNoise = 4
17-03-18 03:04:03.114 -07 000000610 INF: Z Motor: After move to -0.128716, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:03.114 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:04:03.114 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:03.114 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:03.114 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:03.114 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:04:03.114 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:03.114 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:03.114 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:04:03.114 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:04:03.114 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:04:03.114 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:04:03.114 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:04:03.114 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:04:03.114 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:04:03.114 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:04:03.124 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:04:03.124 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:04:03.124 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:04:03.124 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:04:03.124 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:04:03.124 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:04:03.134 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28294 150\n [Camera]
17-03-18 03:04:03.334 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:04:03.734 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:04:03.734 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:04:03.734 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:03.734 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:04:03.734 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:04:03.734 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:03.744 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:03.744 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:04:03.744 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:03.744 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:04:03.924 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28294 786
17-03-18 03:04:04.074 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:04:04.114 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:04:04.114 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms.
17-03-18 03:04:04.114 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:04.114 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 03:04:04.114 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 03:04:04.114 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:04.114 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:04.114 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:04.114 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:04:04.124 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:04:04.274 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:04.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:04.274 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:04.274 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:04.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:04.274 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:04.274 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:04.274 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-18 03:04:04.274 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:04.274 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:04:04.464 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:04:04.464 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:04.464 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28294 150' command took 2 ms to send, 1322 ms to get response, and 1328 ms overall
17-03-18 03:04:04.464 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129372
17-03-18 03:04:04.464 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12937 mm
17-03-18 03:04:04.464 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:04:04.474 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:04:04.474 -07 000000467 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:04:04.474 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:04.474 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28261, sync = True, waitForSettling = False)
17-03-18 03:04:04.474 -07 000000591 INF: Z Motor: Moving to -0.129371 mm, started at -0.128726 mm, distance = -0.64 um
17-03-18 03:04:04.474 -07 000000579 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:04:04.484 -07 000000591 INF: FPGA: Xmit ZDACW 28261\n [Z Motor]
17-03-18 03:04:04.484 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:04:04.484 -07 000000467 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:04.484 -07 000000467 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:04:04.484 -07 000000467 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:04:04.484 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:04:04.494 -07 000000591 INF: FPGA: 'ZDACW 28261' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:04:04.494 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:04.494 -07 000000618 INF: FPGA: Recv ZDACR 28261
17-03-18 03:04:04.504 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:04:04.504 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:04.504 -07 000000591 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-18 03:04:04.644 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:04:04.654 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:04:04.654 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:04.654 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:04:04.654 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:04:04.654 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:04.654 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:04.654 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:04.654 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:04:04.664 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:04:04.874 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:04:04.874 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:04:04.924 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:04.924 -07 000000618 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:04:04.934 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:04:04.934 -07 000000467 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:04.934 -07 000000467 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:04:04.934 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.126 mm/sec
17-03-18 03:04:05.784 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.019446,
17-03-18 03:04:05.894 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:05.894 -07 000000444 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:04:05.904 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:05.904 -07 000000467 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:05.934 -07 000000467 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:04:05.934 -07 000000467 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:04:05.934 -07 000000467 INF: Y Motor: Moved to 71.5190 after 1460 ms (table move)
17-03-18 03:04:05.934 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129371 mm (DAC = 28261)
17-03-18 03:04:05.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.934 -07 000000629 INF: FPGA: Recv ZSGSRD 29430
17-03-18 03:04:05.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:04:05.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.944 -07 000000561 INF: FPGA: Recv ZSGSRD 29426
17-03-18 03:04:05.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:04:05.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.954 -07 000000455 INF: FPGA: Recv ZSGSRD 29436
17-03-18 03:04:05.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:05.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.964 -07 000000461 INF: FPGA: Recv ZSGSRD 29428
17-03-18 03:04:05.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:05.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.974 -07 000000430 INF: FPGA: Recv ZSGSRD 29426
17-03-18 03:04:05.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:05.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29431
17-03-18 03:04:05.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:05.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:05.994 -07 000000467 INF: FPGA: Recv ZSGSRD 29429
17-03-18 03:04:06.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.004 -07 000000455 INF: FPGA: Recv ZSGSRD 29422
17-03-18 03:04:06.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.014 -07 000000461 INF: FPGA: Recv ZSGSRD 29432
17-03-18 03:04:06.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.024 -07 000000576 INF: FPGA: Recv ZSGSRD 29436
17-03-18 03:04:06.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.034 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:06.034 -07 000000569 INF: FPGA: Recv ZPIEZORD 24960
17-03-18 03:04:06.044 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.044 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.312 V. Piezo Error = -9.8 V.
17-03-18 03:04:06.044 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29430 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29430 (-128.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29422 (-128.6 uncal um), Max = 29436 (-128.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:04:06.044 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29430, posNoise = 6, negNoise = 8
17-03-18 03:04:06.044 -07 000000610 INF: Z Motor: After move to -0.129371, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:06.044 -07 000000610 INF: Z Motor: Settle wait time = 1462 ms, measure time = 106 ms (allowed 150 ms), total time = 1568 ms
17-03-18 03:04:06.044 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:04:06.094 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms
17-03-18 03:04:06.094 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:04:06.094 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.12938791534316. ----------
17-03-18 03:04:06.094 -07 000000610 INF: Cycle	107	Tile	15	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:04:06.094 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28084, sync = True, waitForSettling = True)
17-03-18 03:04:06.094 -07 000000610 INF: Z Motor: Moving to -0.128560 mm, started at -0.129388 mm, distance = 0.83 um
17-03-18 03:04:06.094 -07 000000610 INF: FPGA: Xmit ZDACW 28084\n [Z Motor]
17-03-18 03:04:06.094 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:04:06.104 -07 000000610 INF: FPGA: 'ZDACW 28084' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:06.104 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:06.104 -07 000000579 INF: FPGA: Recv ZDACR 28084
17-03-18 03:04:06.114 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.114 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:04:06.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.264 -07 000000502 INF: FPGA: Recv ZSGSRD 29299
17-03-18 03:04:06.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:06.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.274 -07 000000579 INF: FPGA: Recv ZSGSRD 29308
17-03-18 03:04:06.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.284 -07 000000590 INF: FPGA: Recv ZSGSRD 29309
17-03-18 03:04:06.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.294 -07 000000424 INF: FPGA: Recv ZSGSRD 29295
17-03-18 03:04:06.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.304 -07 000000502 INF: FPGA: Recv ZSGSRD 29304
17-03-18 03:04:06.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.314 -07 000000576 INF: FPGA: Recv ZSGSRD 29305
17-03-18 03:04:06.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:04:06.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.324 -07 000000424 INF: FPGA: Recv ZSGSRD 29302
17-03-18 03:04:06.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.334 -07 000000576 INF: FPGA: Recv ZSGSRD 29303
17-03-18 03:04:06.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.344 -07 000000424 INF: FPGA: Recv ZSGSRD 29298
17-03-18 03:04:06.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:06.354 -07 000000561 INF: FPGA: Recv ZSGSRD 29308
17-03-18 03:04:06.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:06.364 -07 000000591 INF: FPGA: Recv ZPIEZORD 24768
17-03-18 03:04:06.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:06.374 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.285 V. Piezo Error = -9.9 V.
17-03-18 03:04:06.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29303 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29304 (-127.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29295 (-127.7 uncal um), Max = 29309 (-127.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:04:06.374 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29303, posNoise = 6, negNoise = 8
17-03-18 03:04:06.374 -07 000000610 INF: Z Motor: After move to -0.128560, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:06.374 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:04:06.374 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:06.374 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:06.374 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:06.374 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:06.374 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:04:06.374 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:04:06.374 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:06.374 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:04:06.374 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:04:06.374 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:04:06.374 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:04:06.374 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:04:06.384 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:04:06.384 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:04:06.384 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:04:06.384 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:04:06.384 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:04:06.384 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:04:06.394 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:04:06.394 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:04:06.394 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28261 150\n [Camera]
17-03-18 03:04:06.534 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:04:06.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:04:06.594 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 03:04:06.994 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:04:06.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:04:06.994 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:06.994 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:06.994 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-18 03:04:06.994 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:04:06.994 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:04:06.994 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:06.994 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:06.994 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:04:07.184 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28261 786
17-03-18 03:04:07.334 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:04:07.374 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:04:07.374 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:04:07.374 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:07.374 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:04:07.374 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:04:07.374 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:07.374 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:07.374 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:07.374 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:04:07.384 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:04:07.534 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:07.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:07.534 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:07.534 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:07.534 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 03:04:07.534 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:07.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:07.534 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:07.534 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:07.534 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 03:04:07.724 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:04:07.724 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:07.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28261 150' command took 2 ms to send, 1323 ms to get response, and 1328 ms overall
17-03-18 03:04:07.724 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:04:07.724 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.128572040401156. ------
17-03-18 03:04:07.724 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13490 mm
17-03-18 03:04:07.724 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:04:07.734 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:04:07.734 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 29470, sync = True, waitForSettling = False)
17-03-18 03:04:07.734 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:04:07.734 -07 000000576 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:04:07.734 -07 000000512 INF: Z Motor: Moving to -0.134905 mm, started at -0.128572 mm, distance = -6.33 um
17-03-18 03:04:07.734 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:04:07.744 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:07.744 -07 000000512 INF: FPGA: Xmit ZDACW 29470\n [Z Motor]
17-03-18 03:04:07.744 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:04:07.754 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:07.754 -07 000000512 INF: FPGA: 'ZDACW 29470' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:04:07.754 -07 000000590 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:04:07.764 -07 000000424 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:04:07.764 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:04:07.764 -07 000000576 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:07.764 -07 000000576 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:04:07.764 -07 000000576 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:04:07.774 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:07.774 -07 000000430 INF: FPGA: Recv ZDACR 29470
17-03-18 03:04:07.784 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:04:07.784 -07 000000512 INF: FPGA: 'ZDACR' command took 2 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:04:07.784 -07 000000512 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-18 03:04:07.914 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:04:07.914 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:04:07.914 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:07.914 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:07.914 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:04:07.914 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:04:07.914 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:04:07.914 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:07.924 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:07.934 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:04:07.964 -07 000000591 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:04:07.964 -07 000000424 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 03:04:08.154 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:04:08.154 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:04:08.204 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:08.214 -07 000000606 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:04:08.214 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:04:08.214 -07 000000576 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:08.214 -07 000000576 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:04:08.214 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-18 03:04:09.164 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:09.164 -07 000000455 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:04:09.174 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:09.174 -07 000000576 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:09.204 -07 000000576 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:04:09.204 -07 000000576 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:04:09.204 -07 000000576 INF: Y Motor: Moved to 72.3496 after 1468 ms (table move)
17-03-18 03:04:09.204 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134905 mm (DAC = 29470)
17-03-18 03:04:09.204 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.204 -07 000000444 INF: FPGA: Recv ZSGSRD 30289
17-03-18 03:04:09.214 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:09.214 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.214 -07 000000430 INF: FPGA: Recv ZSGSRD 30287
17-03-18 03:04:09.224 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.224 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.224 -07 000000591 INF: FPGA: Recv ZSGSRD 30288
17-03-18 03:04:09.234 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.234 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.234 -07 000000502 INF: FPGA: Recv ZSGSRD 30287
17-03-18 03:04:09.244 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.244 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.244 -07 000000569 INF: FPGA: Recv ZSGSRD 30299
17-03-18 03:04:09.254 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.254 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.254 -07 000000462 INF: FPGA: Recv ZSGSRD 30293
17-03-18 03:04:09.264 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.264 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.264 -07 000000590 INF: FPGA: Recv ZSGSRD 30294
17-03-18 03:04:09.274 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.274 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.274 -07 000000579 INF: FPGA: Recv ZSGSRD 30289
17-03-18 03:04:09.284 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.284 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.284 -07 000000626 INF: FPGA: Recv ZSGSRD 30290
17-03-18 03:04:09.294 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.294 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:09.294 -07 000000569 INF: FPGA: Recv ZSGSRD 30288
17-03-18 03:04:09.304 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.304 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:09.304 -07 000000501 INF: FPGA: Recv ZPIEZORD 26116
17-03-18 03:04:09.314 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:09.314 -07 000000561 INF: Z Motor: Piezo is near 35.8 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.497 V. Piezo Error = -9.2 V.
17-03-18 03:04:09.314 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.9 um, Read 10 ADC samples: Avg = 30290 (-134.1 uncal um), Error = 0.8 uncal um, Median = 30289 (-134.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30287 (-134.1 uncal um), Max = 30299 (-134.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:04:09.314 -07 000000561 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30290, posNoise = 9, negNoise = 3
17-03-18 03:04:09.314 -07 000000561 INF: Z Motor: After move to -0.134905, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:09.314 -07 000000561 INF: Z Motor: Settle wait time = 1471 ms, measure time = 105 ms (allowed 150 ms), total time = 1576 ms
17-03-18 03:04:09.314 -07 000000561 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 03:04:09.364 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms
17-03-18 03:04:09.364 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:04:09.364 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:09.364 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:09.364 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:09.364 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:09.374 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:04:09.374 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:09.374 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:04:09.374 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:04:09.374 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:04:09.374 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:04:09.384 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:04:09.384 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 03:04:09.384 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:04:09.424 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:04:09.724 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:04:09.724 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:04:09.724 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:04:09.864 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:04:09.864 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 03:04:09.864 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 471 ms to get response, and 476 ms overall
17-03-18 03:04:09.864 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) start.
17-03-18 03:04:09.974 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1476890328, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 03:04:09.974 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:09.974 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:04:09.974 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 247 ms.
17-03-18 03:04:10.064 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:04:10.064 -07 000000512 INF: Autofocus start
17-03-18 03:04:10.064 -07 000000512 INF: MeasureProfile start
17-03-18 03:04:10.064 -07 000000590 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:04:10.074 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:04:10.074 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:04:10.074 -07 000000512 INF: MeasureProfile done
17-03-18 03:04:10.074 -07 000000512 INF: X=16  Z correction [um]=0.0530179
17-03-18 03:04:10.074 -07 000000512 INF: Autofocus finished
17-03-18 03:04:10.274 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:04:10.274 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:04:10.274 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.134912737785074. ----------
17-03-18 03:04:10.274 -07 000000610 INF: Cycle	107	Tile	16	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:04:10.284 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27994, sync = True, waitForSettling = True)
17-03-18 03:04:10.284 -07 000000610 INF: Z Motor: Moving to -0.128148 mm, started at -0.134913 mm, distance = 6.76 um
17-03-18 03:04:10.284 -07 000000610 INF: FPGA: Xmit ZDACW 27994\n [Z Motor]
17-03-18 03:04:10.284 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:04:10.294 -07 000000610 INF: FPGA: 'ZDACW 27994' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.294 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:10.294 -07 000000455 INF: FPGA: Recv ZDACR 27994
17-03-18 03:04:10.304 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.304 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:04:10.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.454 -07 000000576 INF: FPGA: Recv ZSGSRD 29237
17-03-18 03:04:10.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:10.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.464 -07 000000430 INF: FPGA: Recv ZSGSRD 29243
17-03-18 03:04:10.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.484 -07 000000591 INF: FPGA: Recv ZSGSRD 29239
17-03-18 03:04:10.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:04:10.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.514 -07 000000591 INF: FPGA: Recv ZSGSRD 29234
17-03-18 03:04:10.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:04:10.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.524 -07 000000512 INF: FPGA: Recv ZSGSRD 29238
17-03-18 03:04:10.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.554 -07 000000606 INF: FPGA: Recv ZSGSRD 29238
17-03-18 03:04:10.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:04:10.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.564 -07 000000462 INF: FPGA: Recv ZSGSRD 29242
17-03-18 03:04:10.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.574 -07 000000618 INF: FPGA: Recv ZSGSRD 29239
17-03-18 03:04:10.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.584 -07 000000430 INF: FPGA: Recv ZSGSRD 29235
17-03-18 03:04:10.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:10.594 -07 000000502 INF: FPGA: Recv ZSGSRD 29240
17-03-18 03:04:10.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.604 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:10.604 -07 000000467 INF: FPGA: Recv ZPIEZORD 24732
17-03-18 03:04:10.614 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:10.614 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.272 V. Piezo Error = -9.9 V.
17-03-18 03:04:10.614 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29238 (-127.4 uncal um), Error = 0.8 uncal um, Median = 29238 (-127.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29234 (-127.4 uncal um), Max = 29243 (-127.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:04:10.614 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29238, posNoise = 5, negNoise = 4
17-03-18 03:04:10.614 -07 000000610 INF: Z Motor: After move to -0.128148, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:10.614 -07 000000610 INF: Z Motor: MoveAbsStepped took 330 ms)
17-03-18 03:04:10.614 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:10.614 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:10.614 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:10.614 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:10.614 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:04:10.614 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:04:10.614 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:04:10.614 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:10.614 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:04:10.614 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:04:10.614 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:04:10.614 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:04:10.624 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:04:10.624 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:04:10.624 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:04:10.624 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:04:10.634 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:04:10.634 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:04:10.634 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:04:10.634 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:04:10.634 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28171 150\n [Camera]
17-03-18 03:04:10.834 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:04:11.144 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 4.003063,
17-03-18 03:04:11.234 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:04:11.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:04:11.234 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:11.234 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:04:11.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:04:11.244 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:11.244 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:11.244 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:04:11.244 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:11.244 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:04:11.424 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28171 786
17-03-18 03:04:11.534 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:04:11.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:04:11.574 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:04:11.614 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 371 ms.
17-03-18 03:04:11.614 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:04:11.614 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:11.614 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:04:11.614 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:04:11.614 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:11.614 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:11.614 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:04:11.624 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:11.624 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:04:11.774 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:11.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:11.774 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:11.774 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:11.774 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:11.774 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:11.774 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:11.774 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 03:04:11.884 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:11.894 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:04:11.964 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:04:11.964 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:11.964 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28171 150' command took 2 ms to send, 1324 ms to get response, and 1329 ms overall
17-03-18 03:04:11.964 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128712
17-03-18 03:04:11.964 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12871 mm
17-03-18 03:04:11.964 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:04:11.964 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:04:11.964 -07 000000629 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:04:11.964 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28117, sync = True, waitForSettling = False)
17-03-18 03:04:11.964 -07 000000606 INF: Z Motor: Moving to -0.128711 mm, started at -0.128154 mm, distance = -0.56 um
17-03-18 03:04:11.964 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:11.974 -07 000000590 INF: FPGA: Recv YRDPOS 148173
17-03-18 03:04:11.984 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:11.984 -07 000000629 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:11.984 -07 000000606 INF: FPGA: Xmit ZDACW 28117\n [Z Motor]
17-03-18 03:04:11.984 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:04:11.984 -07 000000629 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:04:11.984 -07 000000629 INF: Y Motor: Moving 1348 steps-27
17-03-18 03:04:11.994 -07 000000606 INF: FPGA: 'ZDACW 28117' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:04:11.994 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:04:12.004 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:12.004 -07 000000461 INF: FPGA: Recv ZDACR 28117
17-03-18 03:04:12.014 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:04:12.014 -07 000000606 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 03:04:12.164 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 03:04:12.164 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:04:12.174 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:12.174 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:12.174 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:04:12.284 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:04:12.284 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:04:12.284 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:12.294 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:04:12.294 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 517 ms.
17-03-18 03:04:12.364 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 03:04:12.364 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 382 ms overall
17-03-18 03:04:12.414 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:12.414 -07 000000455 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:04:12.424 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:04:12.424 -07 000000629 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:12.424 -07 000000629 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 03:04:12.424 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.843 mm, average velocity = 2.207 mm/sec
17-03-18 03:04:13.374 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:13.374 -07 000000626 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:04:13.384 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.384 -07 000000629 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:13.404 -07 000000629 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:04:13.404 -07 000000629 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:04:13.404 -07 000000629 INF: Y Motor: Moved to 73.1763 after 1439 ms (table move)
17-03-18 03:04:13.414 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128711 mm (DAC = 28117)
17-03-18 03:04:13.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.424 -07 000000569 INF: FPGA: Recv ZSGSRD 29319
17-03-18 03:04:13.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:04:13.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.424 -07 000000455 INF: FPGA: Recv ZSGSRD 29335
17-03-18 03:04:13.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.434 -07 000000576 INF: FPGA: Recv ZSGSRD 29327
17-03-18 03:04:13.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.444 -07 000000430 INF: FPGA: Recv ZSGSRD 29329
17-03-18 03:04:13.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.454 -07 000000462 INF: FPGA: Recv ZSGSRD 29324
17-03-18 03:04:13.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.464 -07 000000590 INF: FPGA: Recv ZSGSRD 29331
17-03-18 03:04:13.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.474 -07 000000455 INF: FPGA: Recv ZSGSRD 29320
17-03-18 03:04:13.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.484 -07 000000576 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:04:13.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.494 -07 000000430 INF: FPGA: Recv ZSGSRD 29313
17-03-18 03:04:13.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.504 -07 000000502 INF: FPGA: Recv ZSGSRD 29332
17-03-18 03:04:13.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.514 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:13.514 -07 000000561 INF: FPGA: Recv ZPIEZORD 24864
17-03-18 03:04:13.524 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.524 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.290 V. Piezo Error = -9.8 V.
17-03-18 03:04:13.524 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29324 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29326 (-127.9 uncal um), StdDev = 8 (0.1 uncal um), Range = 22 (0.1 uncal um), Min = 29313 (-127.9 uncal um), Max = 29335 (-128.0 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 03:04:13.524 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29324, posNoise = 11, negNoise = 11
17-03-18 03:04:13.524 -07 000000610 INF: Z Motor: After move to -0.128711, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:13.524 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 109 ms (allowed 150 ms), total time = 1551 ms
17-03-18 03:04:13.524 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:04:13.574 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 03:04:13.574 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:04:13.574 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.128706948856133. ----------
17-03-18 03:04:13.574 -07 000000610 INF: Cycle	107	Tile	17	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:04:13.574 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27940, sync = True, waitForSettling = True)
17-03-18 03:04:13.574 -07 000000610 INF: Z Motor: Moving to -0.127901 mm, started at -0.128707 mm, distance = 0.81 um
17-03-18 03:04:13.574 -07 000000610 INF: FPGA: Xmit ZDACW 27940\n [Z Motor]
17-03-18 03:04:13.574 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:04:13.584 -07 000000610 INF: FPGA: 'ZDACW 27940' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:13.584 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:13.584 -07 000000576 INF: FPGA: Recv ZDACR 27940
17-03-18 03:04:13.594 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:04:13.594 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:04:13.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.744 -07 000000590 INF: FPGA: Recv ZSGSRD 29201
17-03-18 03:04:13.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:13.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.754 -07 000000629 INF: FPGA: Recv ZSGSRD 29202
17-03-18 03:04:13.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.764 -07 000000561 INF: FPGA: Recv ZSGSRD 29203
17-03-18 03:04:13.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.774 -07 000000444 INF: FPGA: Recv ZSGSRD 29201
17-03-18 03:04:13.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.784 -07 000000626 INF: FPGA: Recv ZSGSRD 29192
17-03-18 03:04:13.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.794 -07 000000512 INF: FPGA: Recv ZSGSRD 29196
17-03-18 03:04:13.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.804 -07 000000502 INF: FPGA: Recv ZSGSRD 29198
17-03-18 03:04:13.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.814 -07 000000501 INF: FPGA: Recv ZSGSRD 29205
17-03-18 03:04:13.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.824 -07 000000444 INF: FPGA: Recv ZSGSRD 29205
17-03-18 03:04:13.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:13.834 -07 000000467 INF: FPGA: Recv ZSGSRD 29202
17-03-18 03:04:13.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.844 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:13.844 -07 000000591 INF: FPGA: Recv ZPIEZORD 24694
17-03-18 03:04:13.854 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:13.854 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.263 V. Piezo Error = -9.9 V.
17-03-18 03:04:13.854 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29200 (-127.1 uncal um), Error = 0.8 uncal um, Median = 29202 (-127.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29192 (-127.1 uncal um), Max = 29205 (-127.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:04:13.854 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29200, posNoise = 5, negNoise = 8
17-03-18 03:04:13.854 -07 000000610 INF: Z Motor: After move to -0.127901, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:13.854 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:04:13.854 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:13.854 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:13.854 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:13.854 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:13.854 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:04:13.854 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:13.854 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:04:13.854 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:04:13.854 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:04:13.854 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:04:13.854 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:04:13.854 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:04:13.864 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:04:13.864 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:04:13.864 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 5 ms.
17-03-18 03:04:13.864 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:04:13.874 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:04:13.874 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:04:13.874 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:04:13.874 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:04:13.874 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28117 150\n [Camera]
17-03-18 03:04:14.074 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:04:14.474 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:04:14.474 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:04:14.474 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:14.474 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:04:14.474 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:04:14.474 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:14.484 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:14.484 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:04:14.484 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:14.484 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 03:04:14.664 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28117 786
17-03-18 03:04:14.824 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 939
17-03-18 03:04:14.864 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:04:14.864 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:04:14.864 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:14.864 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:04:14.864 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 03:04:14.864 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:14.874 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:04:14.874 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:04:14.874 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:04:14.884 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:04:15.014 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:15.014 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:15.014 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:15.014 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:15.014 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-18 03:04:15.014 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:15.014 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:15.014 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:15.014 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:15.014 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-18 03:04:15.204 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1321
17-03-18 03:04:15.204 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:15.204 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28117 150' command took 2 ms to send, 1323 ms to get response, and 1328 ms overall
17-03-18 03:04:15.204 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128258
17-03-18 03:04:15.204 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12826 mm
17-03-18 03:04:15.204 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:04:15.204 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:04:15.204 -07 000000467 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:04:15.204 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 28018, sync = True, waitForSettling = False)
17-03-18 03:04:15.204 -07 000000462 INF: Z Motor: Moving to -0.128258 mm, started at -0.127910 mm, distance = -0.35 um
17-03-18 03:04:15.204 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:15.214 -07 000000462 INF: FPGA: Xmit ZDACW 28018\n [Z Motor]
17-03-18 03:04:15.214 -07 000000629 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:04:15.214 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:04:15.214 -07 000000467 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:15.214 -07 000000467 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:04:15.214 -07 000000467 INF: Y Motor: Moving 1354 steps-33
17-03-18 03:04:15.214 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:04:15.224 -07 000000462 INF: FPGA: 'ZDACW 28018' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:04:15.224 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:04:15.234 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:15.234 -07 000000591 INF: FPGA: Recv ZDACR 28018
17-03-18 03:04:15.244 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:04:15.244 -07 000000462 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:04:15.394 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:04:15.394 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:04:15.394 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:15.394 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:04:15.394 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:04:15.394 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:15.394 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:15.394 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:04:15.394 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:15.404 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:04:15.594 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:04:15.594 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 03:04:15.634 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:15.634 -07 000000626 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:04:15.644 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:15.644 -07 000000467 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:15.644 -07 000000467 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:04:15.644 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.846 mm, average velocity = 2.187 mm/sec
17-03-18 03:04:16.504 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.978563,
17-03-18 03:04:16.534 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:04:16.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:04:16.594 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:16.594 -07 000000576 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:04:16.604 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:16.604 -07 000000467 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:16.624 -07 000000467 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:04:16.624 -07 000000467 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:04:16.624 -07 000000467 INF: Y Motor: Moved to 74.0083 after 1413 ms (table move)
17-03-18 03:04:16.624 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128258 mm (DAC = 28018)
17-03-18 03:04:16.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.624 -07 000000606 INF: FPGA: Recv ZSGSRD 29254
17-03-18 03:04:16.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:04:16.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.634 -07 000000629 INF: FPGA: Recv ZSGSRD 29255
17-03-18 03:04:16.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.644 -07 000000430 INF: FPGA: Recv ZSGSRD 29252
17-03-18 03:04:16.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.654 -07 000000618 INF: FPGA: Recv ZSGSRD 29261
17-03-18 03:04:16.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.664 -07 000000502 INF: FPGA: Recv ZSGSRD 29258
17-03-18 03:04:16.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.674 -07 000000501 INF: FPGA: Recv ZSGSRD 29256
17-03-18 03:04:16.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.684 -07 000000576 INF: FPGA: Recv ZSGSRD 29257
17-03-18 03:04:16.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.694 -07 000000444 INF: FPGA: Recv ZSGSRD 29254
17-03-18 03:04:16.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.704 -07 000000424 INF: FPGA: Recv ZSGSRD 29259
17-03-18 03:04:16.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.714 -07 000000590 INF: FPGA: Recv ZSGSRD 29250
17-03-18 03:04:16.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:16.724 -07 000000462 INF: FPGA: Recv ZPIEZORD 24767
17-03-18 03:04:16.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.734 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.275 V. Piezo Error = -9.8 V.
17-03-18 03:04:16.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29256 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29256 (-127.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29250 (-127.5 uncal um), Max = 29261 (-127.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:04:16.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29256, posNoise = 5, negNoise = 6
17-03-18 03:04:16.734 -07 000000610 INF: Z Motor: After move to -0.128258, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:16.734 -07 000000610 INF: Z Motor: Settle wait time = 1415 ms, measure time = 107 ms (allowed 150 ms), total time = 1522 ms
17-03-18 03:04:16.734 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:04:16.784 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms
17-03-18 03:04:16.784 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:04:16.784 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128270102430494. ----------
17-03-18 03:04:16.784 -07 000000610 INF: Cycle	107	Tile	18	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:04:16.784 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27841, sync = True, waitForSettling = True)
17-03-18 03:04:16.784 -07 000000610 INF: Z Motor: Moving to -0.127448 mm, started at -0.128270 mm, distance = 0.82 um
17-03-18 03:04:16.784 -07 000000610 INF: FPGA: Xmit ZDACW 27841\n [Z Motor]
17-03-18 03:04:16.784 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:04:16.794 -07 000000610 INF: FPGA: 'ZDACW 27841' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:04:16.794 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:16.794 -07 000000467 INF: FPGA: Recv ZDACR 27841
17-03-18 03:04:16.804 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.804 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:04:16.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.954 -07 000000629 INF: FPGA: Recv ZSGSRD 29135
17-03-18 03:04:16.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:16.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.964 -07 000000561 INF: FPGA: Recv ZSGSRD 29129
17-03-18 03:04:16.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.974 -07 000000424 INF: FPGA: Recv ZSGSRD 29126
17-03-18 03:04:16.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.984 -07 000000590 INF: FPGA: Recv ZSGSRD 29135
17-03-18 03:04:16.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:16.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:16.994 -07 000000430 INF: FPGA: Recv ZSGSRD 29129
17-03-18 03:04:17.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:17.004 -07 000000462 INF: FPGA: Recv ZSGSRD 29128
17-03-18 03:04:17.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:17.014 -07 000000502 INF: FPGA: Recv ZSGSRD 29124
17-03-18 03:04:17.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:17.024 -07 000000501 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:04:17.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:17.034 -07 000000512 INF: FPGA: Recv ZSGSRD 29133
17-03-18 03:04:17.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:17.044 -07 000000430 INF: FPGA: Recv ZSGSRD 29127
17-03-18 03:04:17.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.054 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:17.054 -07 000000606 INF: FPGA: Recv ZPIEZORD 24591
17-03-18 03:04:17.064 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:17.064 -07 000000610 INF: Z Motor: Piezo is near 32.5 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.248 V. Piezo Error = -9.9 V.
17-03-18 03:04:17.064 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.4 um, Read 10 ADC samples: Avg = 29130 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29129 (-126.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29124 (-126.6 uncal um), Max = 29135 (-126.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:04:17.064 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29130, posNoise = 5, negNoise = 6
17-03-18 03:04:17.064 -07 000000610 INF: Z Motor: After move to -0.127448, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:17.064 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:04:17.064 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:17.064 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:17.064 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:17.064 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:17.064 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:04:17.064 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:17.064 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:04:17.064 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:04:17.064 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:04:17.064 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:04:17.064 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:04:17.064 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:04:17.074 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:04:17.074 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:04:17.074 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:04:17.074 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:04:17.084 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:04:17.084 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:04:17.084 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:04:17.084 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:04:17.084 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 28018 150\n [Camera]
17-03-18 03:04:17.294 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:04:17.694 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:04:17.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:04:17.694 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:17.694 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:17.694 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:04:17.694 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:04:17.694 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:04:17.694 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:17.694 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:17.694 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 03:04:17.884 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28018 786
17-03-18 03:04:18.034 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:04:18.084 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 03:04:18.084 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:04:18.084 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:18.084 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:18.094 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:04:18.094 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 393 ms.
17-03-18 03:04:18.094 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:04:18.094 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:18.094 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:18.104 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:04:18.224 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:18.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:18.224 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:18.224 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:18.224 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 03:04:18.234 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:18.234 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:18.234 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:18.234 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:18.234 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:04:18.424 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:04:18.424 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:18.424 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 28018 150' command took 2 ms to send, 1321 ms to get response, and 1331 ms overall
17-03-18 03:04:18.424 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127456
17-03-18 03:04:18.424 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12746 mm
17-03-18 03:04:18.424 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:04:18.424 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:04:18.424 -07 000000455 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:04:18.424 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:18.424 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 27843, sync = True, waitForSettling = False)
17-03-18 03:04:18.424 -07 000000590 INF: Z Motor: Moving to -0.127457 mm, started at -0.127461 mm, distance = 0.00 um
17-03-18 03:04:18.434 -07 000000590 INF: FPGA: Xmit ZDACW 27843\n [Z Motor]
17-03-18 03:04:18.434 -07 000000444 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:04:18.434 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:04:18.434 -07 000000455 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:18.434 -07 000000455 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:04:18.434 -07 000000455 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:04:18.434 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:04:18.444 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:04:18.444 -07 000000590 INF: FPGA: 'ZDACW 27843' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:04:18.454 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:18.454 -07 000000629 INF: FPGA: Recv ZDACR 27843
17-03-18 03:04:18.464 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:04:18.464 -07 000000590 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:04:18.604 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:04:18.604 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:04:18.604 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:18.604 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:04:18.604 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:04:18.604 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:18.614 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:04:18.614 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:04:18.614 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:04:18.624 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:04:18.814 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:04:18.814 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 03:04:18.854 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:18.854 -07 000000576 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:04:18.864 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:18.864 -07 000000455 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:18.864 -07 000000455 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-18 03:04:18.864 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.176 mm/sec
17-03-18 03:04:19.814 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:04:19.814 -07 000000561 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:04:19.824 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:19.824 -07 000000455 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:04:19.834 -07 000000455 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:04:19.834 -07 000000455 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:04:19.834 -07 000000455 INF: Y Motor: Moved to 74.8320 after 1411 ms (table move)
17-03-18 03:04:19.844 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127457 mm (DAC = 27843)
17-03-18 03:04:19.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.844 -07 000000569 INF: FPGA: Recv ZSGSRD 29137
17-03-18 03:04:19.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:04:19.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.854 -07 000000591 INF: FPGA: Recv ZSGSRD 29128
17-03-18 03:04:19.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.864 -07 000000467 INF: FPGA: Recv ZSGSRD 29124
17-03-18 03:04:19.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.874 -07 000000502 INF: FPGA: Recv ZSGSRD 29128
17-03-18 03:04:19.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.884 -07 000000626 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:04:19.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.894 -07 000000629 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:04:19.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.904 -07 000000606 INF: FPGA: Recv ZSGSRD 29135
17-03-18 03:04:19.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.914 -07 000000467 INF: FPGA: Recv ZSGSRD 29132
17-03-18 03:04:19.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.924 -07 000000462 INF: FPGA: Recv ZSGSRD 29129
17-03-18 03:04:19.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:19.934 -07 000000590 INF: FPGA: Recv ZSGSRD 29133
17-03-18 03:04:19.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.944 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:19.944 -07 000000569 INF: FPGA: Recv ZPIEZORD 24628
17-03-18 03:04:19.954 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:19.954 -07 000000610 INF: Z Motor: Piezo is near 32.6 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.249 V. Piezo Error = -9.9 V.
17-03-18 03:04:19.954 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29131 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29132 (-126.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29124 (-126.6 uncal um), Max = 29137 (-126.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:04:19.954 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29131, posNoise = 6, negNoise = 7
17-03-18 03:04:19.954 -07 000000610 INF: Z Motor: After move to -0.127457, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:19.954 -07 000000610 INF: Z Motor: Settle wait time = 1413 ms, measure time = 109 ms (allowed 150 ms), total time = 1522 ms
17-03-18 03:04:19.954 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:04:20.004 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms
17-03-18 03:04:20.004 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:04:20.004 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.127467075912773. ----------
17-03-18 03:04:20.004 -07 000000610 INF: Cycle	107	Tile	19	Exposure Settings		A	401	G	193	T	193	C	401
17-03-18 03:04:20.004 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27666, sync = True, waitForSettling = True)
17-03-18 03:04:20.004 -07 000000610 INF: Z Motor: Moving to -0.126647 mm, started at -0.127467 mm, distance = 0.82 um
17-03-18 03:04:20.004 -07 000000610 INF: FPGA: Xmit ZDACW 27666\n [Z Motor]
17-03-18 03:04:20.004 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:04:20.014 -07 000000610 INF: FPGA: 'ZDACW 27666' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:04:20.014 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:04:20.014 -07 000000576 INF: FPGA: Recv ZDACR 27666
17-03-18 03:04:20.024 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.024 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:04:20.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.174 -07 000000629 INF: FPGA: Recv ZSGSRD 29004
17-03-18 03:04:20.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:04:20.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.184 -07 000000501 INF: FPGA: Recv ZSGSRD 29006
17-03-18 03:04:20.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.194 -07 000000569 INF: FPGA: Recv ZSGSRD 29002
17-03-18 03:04:20.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.204 -07 000000461 INF: FPGA: Recv ZSGSRD 29002
17-03-18 03:04:20.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.214 -07 000000576 INF: FPGA: Recv ZSGSRD 29007
17-03-18 03:04:20.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.224 -07 000000629 INF: FPGA: Recv ZSGSRD 29006
17-03-18 03:04:20.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.234 -07 000000591 INF: FPGA: Recv ZSGSRD 29002
17-03-18 03:04:20.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.244 -07 000000579 INF: FPGA: Recv ZSGSRD 29004
17-03-18 03:04:20.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.254 -07 000000606 INF: FPGA: Recv ZSGSRD 29000
17-03-18 03:04:20.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:04:20.264 -07 000000512 INF: FPGA: Recv ZSGSRD 29006
17-03-18 03:04:20.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.274 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:04:20.274 -07 000000561 INF: FPGA: Recv ZPIEZORD 24472
17-03-18 03:04:20.284 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:04:20.284 -07 000000610 INF: Z Motor: Piezo is near 32.3 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.222 V. Piezo Error = -9.9 V.
17-03-18 03:04:20.284 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.6 um, Read 10 ADC samples: Avg = 29004 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29004 (-125.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29000 (-125.9 uncal um), Max = 29007 (-125.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:04:20.284 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29004, posNoise = 3, negNoise = 4
17-03-18 03:04:20.284 -07 000000610 INF: Z Motor: After move to -0.126647, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:04:20.284 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:04:20.284 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:04:20.284 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:04:20.284 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:04:20.284 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:04:20.284 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:04:20.284 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:04:20.284 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:04:20.284 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:04:20.284 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:04:20.284 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:04:20.284 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:04:20.284 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:04:20.294 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:04:20.294 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:04:20.294 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:04:20.294 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:04:20.304 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:04:20.304 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:04:20.304 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:04:20.304 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:04:20.314 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 401 401 193 193 27843 150\n [Camera]
17-03-18 03:04:20.514 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:04:20.914 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 593
17-03-18 03:04:20.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 593
17-03-18 03:04:20.914 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 593
17-03-18 03:04:20.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 593
17-03-18 03:04:20.914 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:20.914 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:20.914 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:04:20.914 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:20.914 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:20.914 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:04:21.104 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27843 786
17-03-18 03:04:21.254 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 936
17-03-18 03:04:21.294 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:04:21.294 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:04:21.294 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:21.294 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:04:21.294 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:04:21.294 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:21.294 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:21.294 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:04:21.294 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:04:21.304 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:04:21.444 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1129
17-03-18 03:04:21.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1129
17-03-18 03:04:21.444 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:04:21.444 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:04:21.444 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:04:21.454 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1129
17-03-18 03:04:21.454 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1129
17-03-18 03:04:21.454 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:04:21.454 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:04:21.454 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 03:04:21.534 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:04:21.534 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 106. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1578, R2=1643, Total=3221. Warn if over 250 bubbles per interval.
17-03-18 03:04:21.634 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:04:21.644 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:04:21.644 -07 000000610 INF: FPGA: 'CAMDBLSNAP 401 401 193 193 27843 150' command took 2 ms to send, 1319 ms to get response, and 1328 ms overall
17-03-18 03:04:21.824 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:04:21.824 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:04:21.824 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:21.824 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:04:21.824 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:04:21.834 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:04:21.834 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:21.834 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:04:21.834 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:04:21.834 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:04:21.844 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:04:21.864 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.999021,
17-03-18 03:04:21.874 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:04:21.874 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:04:21.914 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-18 03:04:21.934 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:04:21.934 -07 000000610 INF: Imaging Cycle 107: ScanTilesCommand Cycle 107 time end. Duration was 140091 ms.
17-03-18 03:04:21.934 -07 000000610 INF: =================== Cycle #107 ===================
17-03-18 03:04:21.934 -07 000000610 INF: ===================  ===================
17-03-18 03:04:21.934 -07 000000629 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:04:21.944 -07 000000626 INF: FPGA: Recv EXLED1ADCR 26
17-03-18 03:04:21.944 -07 000000629 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:04:21.944 -07 000000629 INF: GreenLED: Using Green data: Photodiode ADC 26 --> 0.0 mW (old method), or 1.9 mW (new method). Difference = 1.9 mW
17-03-18 03:04:21.944 -07 000000629 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 107, FrontChillerTemperature: 3.999021, FrontChillerHeatSinkTemperature: 0.436892, AmbientTemperature: 18.66085, FlowCellCompartmentTemperature: 21.99981, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.5141, GreenLEDSensorTemperature: 24.93976, PhotodiodePowerAdcGreen: 26, PhotodiodePowerMwGreen: 1.927049
17-03-18 03:04:22.024 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.