17-03-18 03:08:53.544 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:08:53.544 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 03:08:53.544 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 03:08:53.544 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:08:53.554 -07 000000430 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:08:53.554 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:08:53.554 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:08:53.554 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 03:08:53.554 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 03:08:53.554 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 03:08:53.664 -07 000000606 INF: FPGA: Recv YMVTO 154379 878
17-03-18 03:08:53.664 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 108 ms to get response, and 117 ms overall
17-03-18 03:08:53.664 -07 000000610 INF: Y Motor: Position error before settling = 0 encoder counts (0.000 mm)
17-03-18 03:08:53.664 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 878 steps (0.549 mm). Slippage = 0.001 mm (0.00%).
17-03-18 03:08:53.664 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.549 mm, average velocity = 4.649 mm/sec
17-03-18 03:08:55.394 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.003063,
17-03-18 03:08:56.544 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:08:56.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1590, R2=1656, Total=3246. Warn if over 250 bubbles per interval.
17-03-18 03:08:56.664 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:08:56.664 -07 000000626 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:08:56.674 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:08:56.674 -07 000000610 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:08:56.694 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:08:56.694 -07 000000610 INF: Y Motor: Position error after settling = 8 encoder counts (0.004 mm), Delta during settling = 8 counts (0.004 mm)
17-03-18 03:08:56.694 -07 000000610 INF: Y Motor: Moved to 75.3843 after 3151 ms
17-03-18 03:08:56.704 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 60° ===================
17-03-18 03:08:56.704 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 03:08:56.704 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 03:08:56.704 -07 000000576 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:08:56.714 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:08:56.714 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:08:56.714 -07 000000467 INF: FPGA: Recv TEC2EN 
17-03-18 03:08:56.724 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:08:56.724 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 60° ===================
17-03-18 03:08:56.724 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:08:56.724 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:08:56.724 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:08:56.744 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:08:56.744 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 03:08:56.744 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:08:57.044 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:08:57.064 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:08:57.064 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:08:57.114 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:08:57.134 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:08:57.134 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:08:57.234 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:08:57.234 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:08:57.234 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:08:57.264 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:08:57.264 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:08:57.264 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:08:57.394 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:08:57.434 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:00.564 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:00.594 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:00.754 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.981281,
17-03-18 03:09:01.014 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:01.044 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:01.464 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:01.494 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:01.494 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:09:01.494 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:01.544 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 03:09:01.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1591, R2=1657, Total=3248. Warn if over 250 bubbles per interval.
17-03-18 03:09:01.624 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:01.654 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:09:01.654 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:09:01.784 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:01.814 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:09:01.814 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:09:01.814 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:09:01.944 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:09:01.974 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:02.404 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:02.434 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:02.434 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:09:02.434 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:03.654 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 03:09:03.654 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 03:09:03.654 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:03.674 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:09:03.674 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 03:09:03.674 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 03:09:03.804 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:09:03.824 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 03:09:03.824 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 03:09:03.874 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:03.894 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:09:03.894 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:09:03.994 -07 000000610 INF: =================== Cycle #109, Pumping Reagent CMS (4) ===================
17-03-18 03:09:03.994 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:09:03.994 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:04.024 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:09:04.024 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:09:04.024 -07 000000610 INF: =================== Cycle #109, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 03:09:04.154 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:09:04.194 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:05.634 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:05.664 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:06.084 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:06.114 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:06.114 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-18 03:09:06.114 -07 000000610 INF: =================== Cycle #109, Pumping Reagent CMS (4) ===================
17-03-18 03:09:06.114 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.981281,
17-03-18 03:09:06.244 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:06.274 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:09:06.274 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:09:06.404 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:06.434 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:09:06.434 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:09:06.434 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:09:06.544 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:06.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1591, R2=1657, Total=3248. Warn if over 250 bubbles per interval.
17-03-18 03:09:06.564 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:09:06.594 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:07.024 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:07.054 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:07.054 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:09:07.054 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:08.274 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:09:08.274 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:09:08.274 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:08.294 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 03:09:08.294 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 03:09:08.294 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 03:09:08.444 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:09:08.464 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 03:09:08.464 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 03:09:08.514 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:08.534 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:09:08.534 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:09:08.634 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:08.634 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:09:08.634 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:08.664 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:09:08.664 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:09:08.664 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:09:08.794 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:09:08.834 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:09.704 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:09.734 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:09.734 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:09:09.734 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:09.864 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:09.894 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:09:09.894 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:09:10.024 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:10.054 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:09:10.054 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:09:10.054 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:09:10.184 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:09:10.214 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:10.644 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:10.674 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:10.674 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:09:10.674 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:10.674 -07 000000629 INF: WaitCommand(10000) start
17-03-18 03:09:10.674 -07 000000579 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:09:10.674 -07 000000579 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:09:11.474 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.005817,
17-03-18 03:09:11.544 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:11.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1591, R2=1657, Total=3248. Warn if over 250 bubbles per interval.
17-03-18 03:09:11.894 -07 000000579 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:09:11.894 -07 000000579 INF: LanePump: Xmit /1?\r
17-03-18 03:09:11.924 -07 000000579 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:09:11.924 -07 000000579 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:09:12.054 -07 000000579 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:09:12.094 -07 000000579 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:13.624 -07 000000579 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:13.654 -07 000000579 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:14.074 -07 000000579 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:14.104 -07 000000579 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:14.104 -07 000000579 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:09:14.104 -07 000000579 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:09:14.104 -07 000000579 INF: ===================  ===================
17-03-18 03:09:16.544 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:16.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1591, R2=1657, Total=3248. Warn if over 250 bubbles per interval.
17-03-18 03:09:16.834 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.977204,
17-03-18 03:09:20.684 -07 000000629 INF: WaitCommand(10000) end
17-03-18 03:09:20.684 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:20.684 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 03:09:20.684 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:20.714 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:09:20.714 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:09:20.714 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:09:20.844 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 03:09:20.884 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:21.544 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:21.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1591, R2=1657, Total=3248. Warn if over 250 bubbles per interval.
17-03-18 03:09:22.194 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.973092,
17-03-18 03:09:26.544 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:26.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1591, R2=1657, Total=3248. Warn if over 250 bubbles per interval.
17-03-18 03:09:27.014 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:27.044 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:27.464 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:27.494 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:27.554 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.99219,
17-03-18 03:09:27.914 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:27.944 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:28.364 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:28.394 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:28.814 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:28.844 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:28.844 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 03:09:28.844 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:28.974 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:29.004 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:09:29.004 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:09:29.134 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:29.164 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:09:29.164 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:09:29.164 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:09:29.294 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:09:29.324 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:29.754 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:29.784 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:29.784 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:09:29.784 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:31.004 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 03:09:31.004 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 03:09:31.004 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:31.024 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:09:31.024 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 03:09:31.024 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 03:09:31.234 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:09:31.254 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 03:09:31.254 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 03:09:31.304 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:31.324 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:09:31.324 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:09:31.424 -07 000000610 INF: =================== Cycle #109, Pumping Reagent IMT (1) ===================
17-03-18 03:09:31.424 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:09:31.424 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:31.454 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 03:09:31.454 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 03:09:31.454 -07 000000610 INF: =================== Cycle #109, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 03:09:31.544 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 2
17-03-18 03:09:31.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=2, R2=1, Total=3. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1593, R2=1658, Total=3251. Warn if over 250 bubbles per interval.
17-03-18 03:09:31.584 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:09:31.624 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:32.914 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.999021,
17-03-18 03:09:33.064 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:33.094 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:33.514 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:33.544 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:33.544 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:09:33.544 -07 000000610 INF: =================== Cycle #109, Pumping Reagent IMT (1) ===================
17-03-18 03:09:33.674 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:33.704 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:09:33.704 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:09:33.834 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:33.864 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:09:33.864 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:09:33.864 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:09:33.994 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:09:34.024 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:34.454 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:34.484 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:34.484 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:09:34.484 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:35.704 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:09:35.704 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:09:35.704 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:35.724 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 03:09:35.724 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 03:09:35.724 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:09:35.954 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:09:35.974 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 03:09:35.974 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 03:09:36.024 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:09:36.044 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:09:36.044 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:09:36.144 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:36.144 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:09:36.144 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:36.174 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 03:09:36.174 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 03:09:36.174 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:09:36.304 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:09:36.344 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:09:36.544 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:09:36.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1593, R2=1659, Total=3252. Warn if over 250 bubbles per interval.
17-03-18 03:09:37.214 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:37.244 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:37.244 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 03:09:37.244 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:09:37.374 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:37.404 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:09:37.404 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:09:37.534 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:09:37.564 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:09:37.564 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:09:37.564 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:09:37.694 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:09:37.724 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:38.154 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:09:38.184 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:09:38.184 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:09:38.184 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:38.184 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 65° ===================
17-03-18 03:09:38.184 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 03:09:38.184 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 03:09:38.184 -07 000000502 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:09:38.194 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:09:38.194 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:09:38.194 -07 000000606 INF: FPGA: Recv TEC2EN 
17-03-18 03:09:38.204 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:09:38.204 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 65° ===================
17-03-18 03:09:38.204 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:09:38.204 -07 000000610 INF: WaitCommand(30000) start
17-03-18 03:09:38.274 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.997626,
17-03-18 03:09:41.544 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:09:41.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1659, Total=3253. Warn if over 250 bubbles per interval.
17-03-18 03:09:43.634 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.974486,
17-03-18 03:09:46.544 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 03:09:46.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:09:48.994 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.975845,
17-03-18 03:09:51.544 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:51.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:09:54.354 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.019446,
17-03-18 03:09:56.544 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:09:56.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:09:59.714 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.016692,
17-03-18 03:10:01.544 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:01.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:05.074 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.008536,
17-03-18 03:10:06.544 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:06.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:08.214 -07 000000610 INF: WaitCommand(30000) end
17-03-18 03:10:08.214 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:10:08.214 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 03:10:08.314 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:08.344 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 03:10:08.344 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 03:10:08.344 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:10:08.474 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 03:10:08.514 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:09.054 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:09.084 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:09.084 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 03:10:09.084 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:10:09.214 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:09.244 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:10:09.244 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:10:09.374 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:09.404 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:10:09.404 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:10:09.404 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:10:09.534 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:10:09.564 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:09.994 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:10.024 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:10.024 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 03:10:10.024 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:10:10.024 -07 000000579 INF: WaitCommand(30000) start
17-03-18 03:10:10.024 -07 000000444 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:10:10.024 -07 000000444 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:10:10.434 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.004458,
17-03-18 03:10:11.244 -07 000000444 INF: AsyncDelayTimer waited 1216ms
17-03-18 03:10:11.244 -07 000000444 INF: LanePump: Xmit /1?\r
17-03-18 03:10:11.274 -07 000000444 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 03:10:11.274 -07 000000444 INF: LanePump: Current Position of Pump is: 1920
17-03-18 03:10:11.404 -07 000000444 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:10:11.444 -07 000000444 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:11.544 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:11.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:13.784 -07 000000444 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:13.814 -07 000000444 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:14.234 -07 000000444 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:14.264 -07 000000444 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:14.264 -07 000000444 INF: LanePump: Waited 2820 ms for pump motion to complete
17-03-18 03:10:14.264 -07 000000444 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:10:14.264 -07 000000444 INF: ===================  ===================
17-03-18 03:10:15.794 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.994908,
17-03-18 03:10:16.544 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:16.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:21.154 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.996267,
17-03-18 03:10:21.544 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:21.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:26.514 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.016692,
17-03-18 03:10:26.544 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:26.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:31.544 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:31.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:31.874 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.037119,
17-03-18 03:10:36.544 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:36.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1594, R2=1660, Total=3254. Warn if over 250 bubbles per interval.
17-03-18 03:10:37.234 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.011254,
17-03-18 03:10:40.034 -07 000000579 INF: WaitCommand(30000) end
17-03-18 03:10:40.034 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 22° ===================
17-03-18 03:10:40.034 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 03:10:40.034 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 03:10:40.044 -07 000000606 INF: FPGA: Recv TEC2TEMP 
17-03-18 03:10:40.044 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:10:40.044 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 03:10:40.044 -07 000000424 INF: FPGA: Recv TEC2EN 
17-03-18 03:10:40.054 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:10:40.054 -07 000000610 INF: =================== Cycle #109, Flow Cell Temp 22° ===================
17-03-18 03:10:40.054 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:10:40.054 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:10:40.054 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 03:10:40.054 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:40.094 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 03:10:40.094 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 03:10:40.094 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:10:40.224 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 03:10:40.264 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:41.544 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-18 03:10:41.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1595, R2=1660, Total=3255. Warn if over 250 bubbles per interval.
17-03-18 03:10:42.594 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.978563,
17-03-18 03:10:43.394 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:43.424 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:43.844 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:43.874 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:44.294 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:44.324 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:44.324 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 03:10:44.324 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:10:44.454 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:44.484 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:10:44.484 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:10:44.614 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:44.644 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:10:44.644 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:10:44.644 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:10:44.774 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:10:44.804 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:45.234 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:45.264 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:45.264 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:10:45.264 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:10:46.484 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 03:10:46.484 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 03:10:46.484 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:10:46.504 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:10:46.504 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 03:10:46.504 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 03:10:46.544 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 8 R1 6
17-03-18 03:10:46.544 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=6, R2=8, Total=14. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:10:46.654 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:10:46.674 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:10:46.674 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:10:46.724 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:10:46.744 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:10:46.744 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:10:46.844 -07 000000610 INF: =================== Cycle #109, Pumping Reagent USM (2) ===================
17-03-18 03:10:46.844 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 03:10:46.844 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:46.874 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 03:10:46.874 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 03:10:46.874 -07 000000610 INF: =================== Cycle #109, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 03:10:47.004 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 03:10:47.044 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:47.954 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.997626,
17-03-18 03:10:48.484 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:48.514 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:48.934 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:48.964 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:48.964 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 03:10:48.964 -07 000000610 INF: =================== Cycle #109, Pumping Reagent USM (2) ===================
17-03-18 03:10:49.094 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:49.124 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:10:49.124 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:10:49.254 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:49.284 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:10:49.284 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:10:49.284 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:10:49.414 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:10:49.444 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:49.874 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:49.904 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:49.904 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:10:49.904 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:10:51.124 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-18 03:10:51.124 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 03:10:51.124 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:10:51.144 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 03:10:51.144 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 03:10:51.144 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 03:10:51.294 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:10:51.314 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 03:10:51.314 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 03:10:51.364 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:10:51.384 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:10:51.384 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 03:10:51.484 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:10:51.484 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 03:10:51.484 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:51.514 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 03:10:51.514 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 03:10:51.514 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 03:10:51.544 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:10:51.644 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 03:10:51.684 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:52.554 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:52.584 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:52.584 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-18 03:10:52.584 -07 000000610 INF: =================== Cycle #109, Pumping Reagent PR2 (3) ===================
17-03-18 03:10:52.714 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:52.744 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:10:52.744 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:10:52.874 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 03:10:52.904 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:10:52.904 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:10:52.904 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 03:10:53.034 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 03:10:53.064 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:53.314 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.978563,
17-03-18 03:10:53.494 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:53.524 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:53.524 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 03:10:53.524 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:10:53.524 -07 000000424 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:10:53.524 -07 000000502 INF: WaitCommand(10000) start
17-03-18 03:10:53.524 -07 000000424 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 03:10:54.744 -07 000000424 INF: AsyncDelayTimer waited 1214ms
17-03-18 03:10:54.744 -07 000000424 INF: LanePump: Xmit /1?\r
17-03-18 03:10:54.774 -07 000000424 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 03:10:54.774 -07 000000424 INF: LanePump: Current Position of Pump is: 1110
17-03-18 03:10:54.904 -07 000000424 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 03:10:54.944 -07 000000424 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:56.474 -07 000000424 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:56.504 -07 000000424 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 03:10:56.544 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:10:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:10:56.924 -07 000000424 INF: LanePump: Xmit /1Q\r
17-03-18 03:10:56.954 -07 000000424 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 03:10:56.954 -07 000000424 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 03:10:56.954 -07 000000424 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 03:10:56.954 -07 000000424 INF: ===================  ===================
17-03-18 03:10:58.674 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.000345,
17-03-18 03:11:01.544 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:03.534 -07 000000502 INF: WaitCommand(10000) end
17-03-18 03:11:03.534 -07 000000610 INF: =================== Cycle #109, Imaging ===================
17-03-18 03:11:03.534 -07 000000610 INF: Imaging Cycle 109: ScanTilesCommand Cycle 109 time start.
17-03-18 03:11:03.534 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 03:11:03.534 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:11:03.564 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 03:11:03.564 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 03:11:03.564 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 03:11:03.864 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 03:11:03.884 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 03:11:03.884 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 03:11:03.934 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 03:11:03.954 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 03:11:03.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:03.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:03.954 -07 000000502 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 03:11:03.954 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:03.954 -07 000000502 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 03:11:03.954 -07 000000455 INF: FPGA: Recv EXLED1ON 
17-03-18 03:11:03.964 -07 000000502 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:11:03.964 -07 000000502 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 03:11:03.964 -07 000000629 INF: FPGA: Recv EXLED1ADCR 23201
17-03-18 03:11:03.974 -07 000000502 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:03.974 -07 000000502 INF: RedLED: Using Red data: Photodiode ADC 23201 --> 7.5 mW (old method), or 205.6 mW (new method). Difference = 198.2 mW
17-03-18 03:11:03.974 -07 000000502 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 03:11:03.974 -07 000000561 INF: FPGA: Recv EXLED1OFF 
17-03-18 03:11:03.984 -07 000000502 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:03.984 -07 000000502 INF: RedLED: LED was on for 20 ms
17-03-18 03:11:03.984 -07 000000502 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-18 03:11:03.984 -07 000000502 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 03:11:03.984 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:03.984 -07 000000502 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 03:11:03.984 -07 000000467 INF: FPGA: Recv EXLED2ON 
17-03-18 03:11:03.994 -07 000000502 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:11:03.994 -07 000000502 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:11:03.994 -07 000000618 INF: FPGA: Recv EXLED1ADCR 2099
17-03-18 03:11:04.004 -07 000000502 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:04.004 -07 000000502 INF: GreenLED: Using Green data: Photodiode ADC 2099 --> 0.9 mW (old method), or 182.4 mW (new method). Difference = 181.5 mW
17-03-18 03:11:04.004 -07 000000502 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 03:11:04.004 -07 000000591 INF: FPGA: Recv EXLED2OFF 
17-03-18 03:11:04.014 -07 000000502 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:04.014 -07 000000502 INF: GreenLED: LED was on for 19 ms
17-03-18 03:11:04.014 -07 000000502 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 03:11:04.014 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:11:04.014 -07 000000590 INF: FPGA: Recv EMCUR 
17-03-18 03:11:04.024 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:04.034 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 03:11:04.034 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.007176,
17-03-18 03:11:04.534 -07 000000455 INF: FPGA: Recv EMOUT
17-03-18 03:11:04.534 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 492 ms to get response, and 512 ms overall
17-03-18 03:11:04.534 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 03:11:04.534 -07 000000502 INF: FPGA: Recv EMCUR 
17-03-18 03:11:04.544 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:04.544 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:11:04.544 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38427734375, Z-Position -0.126535565152218. ------
17-03-18 03:11:04.544 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:04.544 -07 000000467 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17859 mm
17-03-18 03:11:04.544 -07 000000467 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:04.544 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:11:04.544 -07 000000461 INF: Y Motor: Moving to 59.9126 mm, started at 75.3843 mm, delta = -15.4717 mm
17-03-18 03:11:04.544 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 39012, sync = True, waitForSettling = False)
17-03-18 03:11:04.544 -07 000000462 INF: Z Motor: Moving to -0.178585 mm, started at -0.126536 mm, distance = -52.05 um
17-03-18 03:11:04.544 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:04.554 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:04.554 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:04.554 -07 000000561 INF: FPGA: Recv YRDPOS 154387
17-03-18 03:11:04.564 -07 000000462 INF: FPGA: Xmit ZDACW 39012\n [Z Motor]
17-03-18 03:11:04.564 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:11:04.564 -07 000000461 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:04.564 -07 000000461 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 03:11:04.564 -07 000000461 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:11:04.564 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:11:04.574 -07 000000462 INF: FPGA: 'ZDACW 39012' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-18 03:11:04.574 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:11:04.584 -07 000000461 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:11:04.594 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:04.594 -07 000000455 INF: FPGA: Recv ZDACR 39012
17-03-18 03:11:04.604 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:11:04.604 -07 000000462 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet))
17-03-18 03:11:04.774 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:11:04.774 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 03:11:06.264 -07 000000569 INF: FPGA: Recv YMVTO 122703 24782
17-03-18 03:11:06.264 -07 000000461 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1705 ms overall
17-03-18 03:11:06.264 -07 000000461 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:11:06.264 -07 000000461 INF: Y Motor: To move from 75.384 to 59.913 (-15.472 mm) should take 24755 steps, but required 24782 steps (15.489 mm). Slippage = 0.017 mm (0.00%).
17-03-18 03:11:06.264 -07 000000461 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1705 ms, distance = 15.472 mm, average velocity = 9.074 mm/sec
17-03-18 03:11:06.544 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:09.114 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:09.114 -07 000000430 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:11:09.124 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:09.124 -07 000000461 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:09.154 -07 000000461 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:09.154 -07 000000461 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:11:09.154 -07 000000461 INF: Y Motor: Moved to 59.9106 after 4603 ms
17-03-18 03:11:09.154 -07 000000467 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178585 mm (DAC = 39012)
17-03-18 03:11:09.154 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.154 -07 000000424 INF: FPGA: Recv ZSGSRD 37097
17-03-18 03:11:09.164 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:09.164 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.164 -07 000000569 INF: FPGA: Recv ZSGSRD 37089
17-03-18 03:11:09.174 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.174 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.174 -07 000000576 INF: FPGA: Recv ZSGSRD 37088
17-03-18 03:11:09.184 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.184 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.184 -07 000000444 INF: FPGA: Recv ZSGSRD 37086
17-03-18 03:11:09.194 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.194 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.194 -07 000000579 INF: FPGA: Recv ZSGSRD 37087
17-03-18 03:11:09.204 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.204 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.204 -07 000000626 INF: FPGA: Recv ZSGSRD 37089
17-03-18 03:11:09.214 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.214 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.214 -07 000000512 INF: FPGA: Recv ZSGSRD 37091
17-03-18 03:11:09.224 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.224 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.224 -07 000000561 INF: FPGA: Recv ZSGSRD 37090
17-03-18 03:11:09.234 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.234 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.234 -07 000000444 INF: FPGA: Recv ZSGSRD 37092
17-03-18 03:11:09.244 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.244 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:09.244 -07 000000502 INF: FPGA: Recv ZSGSRD 37090
17-03-18 03:11:09.254 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.254 -07 000000467 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:09.254 -07 000000606 INF: FPGA: Recv ZPIEZORD 33315
17-03-18 03:11:09.264 -07 000000467 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:09.264 -07 000000467 INF: Z Motor: Piezo is near 51.2 V (nominally 0 to 100 V), expect near 59.5 V, since DAC is at 5.953 V. Piezo Error = -8.4 V.
17-03-18 03:11:09.264 -07 000000467 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.6 um, Read 10 ADC samples: Avg = 37090 (-177.7 uncal um), Error = 0.9 uncal um, Median = 37090 (-177.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37086 (-177.7 uncal um), Max = 37097 (-177.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:09.264 -07 000000467 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37090, posNoise = 7, negNoise = 4
17-03-18 03:11:09.264 -07 000000467 INF: Z Motor: After move to -0.178585, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:09.264 -07 000000467 INF: Z Motor: Settle wait time = 4607 ms, measure time = 106 ms (allowed 150 ms), total time = 4713 ms
17-03-18 03:11:09.264 -07 000000467 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:09.314 -07 000000467 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4764 ms
17-03-18 03:11:09.314 -07 000000467 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:09.314 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:09.314 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:09.314 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:09.314 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:09.314 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:11:09.314 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:09.314 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:09.314 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:11:09.344 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 03:11:09.344 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:11:09.344 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 03:11:09.344 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:11:09.354 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:11:09.354 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 41 ms.
17-03-18 03:11:09.364 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:11:09.404 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.96762,
17-03-18 03:11:09.404 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:11:09.704 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:11:09.704 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:11:09.704 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:11:09.704 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 617479552, 0x0, 559484976) start.
17-03-18 03:11:09.744 -07 000000461 INF: FPGA: Recv @CAMSNAP 381
17-03-18 03:11:09.744 -07 000000455 INF: FPGA: Recv CAMSNAP
17-03-18 03:11:09.744 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 385 ms overall
17-03-18 03:11:09.834 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 617479552, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:11:09.834 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:09.834 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:11:09.834 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:11:09.944 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:09.944 -07 000000569 INF: Image SNR check: start
17-03-18 03:11:09.944 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:09.954 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:09.954 -07 000000502 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:11:09.954 -07 000000569 INF: Image SNR check: pass  [peak (Max-Min)=154.84]
17-03-18 03:11:09.954 -07 000000569 INF: Autofocus start
17-03-18 03:11:09.954 -07 000000569 INF: MeasureProfile start
17-03-18 03:11:09.964 -07 000000569 INF: MeasureProfile done
17-03-18 03:11:09.964 -07 000000569 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:11:09.964 -07 000000569 INF: Autofocus finished
17-03-18 03:11:10.154 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:11:10.154 -07 000000502 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:11:10.154 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.178597380349049. ----------
17-03-18 03:11:10.154 -07 000000610 INF: Cycle	109	Tile	1	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:10.164 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37527, sync = True, waitForSettling = True)
17-03-18 03:11:10.164 -07 000000610 INF: Z Motor: Moving to -0.171788 mm, started at -0.178597 mm, distance = 6.81 um
17-03-18 03:11:10.164 -07 000000610 INF: FPGA: Xmit ZDACW 37527\n [Z Motor]
17-03-18 03:11:10.164 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:11:10.174 -07 000000610 INF: FPGA: 'ZDACW 37527' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:11:10.174 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:10.174 -07 000000591 INF: FPGA: Recv ZDACR 37527
17-03-18 03:11:10.184 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.184 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:10.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.334 -07 000000462 INF: FPGA: Recv ZSGSRD 36034
17-03-18 03:11:10.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:10.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.344 -07 000000590 INF: FPGA: Recv ZSGSRD 36034
17-03-18 03:11:10.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.354 -07 000000629 INF: FPGA: Recv ZSGSRD 36033
17-03-18 03:11:10.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.364 -07 000000618 INF: FPGA: Recv ZSGSRD 36028
17-03-18 03:11:10.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.374 -07 000000502 INF: FPGA: Recv ZSGSRD 36028
17-03-18 03:11:10.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.384 -07 000000462 INF: FPGA: Recv ZSGSRD 36035
17-03-18 03:11:10.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.394 -07 000000626 INF: FPGA: Recv ZSGSRD 36027
17-03-18 03:11:10.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.404 -07 000000461 INF: FPGA: Recv ZSGSRD 36029
17-03-18 03:11:10.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.414 -07 000000561 INF: FPGA: Recv ZSGSRD 36030
17-03-18 03:11:10.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:10.424 -07 000000444 INF: FPGA: Recv ZSGSRD 36036
17-03-18 03:11:10.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.434 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:10.434 -07 000000512 INF: FPGA: Recv ZPIEZORD 31933
17-03-18 03:11:10.444 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:10.444 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.726 V. Piezo Error = -9.0 V.
17-03-18 03:11:10.444 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36031 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36032 (-170.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36027 (-170.9 uncal um), Max = 36036 (-170.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:10.444 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36031, posNoise = 5, negNoise = 4
17-03-18 03:11:10.444 -07 000000610 INF: Z Motor: After move to -0.171788, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:10.444 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:11:10.444 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:10.444 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:10.444 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:10.444 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:10.444 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:10.444 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:10.444 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:10.444 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:10.444 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:10.444 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:10.444 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:10.444 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:11:10.454 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:11:10.454 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:10.464 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:11:10.464 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:11:10.474 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms.
17-03-18 03:11:10.474 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:10.474 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:11:10.474 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:10.484 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:11:10.484 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 40 ms.
17-03-18 03:11:10.484 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37704 150\n [Camera]
17-03-18 03:11:10.684 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:11.094 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:11.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:11.094 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:11.094 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:11.094 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:11.094 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:11.094 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:11.094 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:11:11.094 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:11.094 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:11:11.284 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37704 787
17-03-18 03:11:11.434 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:11.494 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:11:11.494 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:11:11.494 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:11.494 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 03:11:11.494 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:11:11.494 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:11.494 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:11.494 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:11:11.494 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 03:11:11.504 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:11:11.554 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:11.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:11.624 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:11.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:11.624 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:11.624 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:11.624 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:11:11.634 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:11.634 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:11.634 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:11.634 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:11.634 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:11:11.814 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:11.814 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:11.814 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37704 150' command took 2 ms to send, 1319 ms to get response, and 1330 ms overall
17-03-18 03:11:11.824 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:11:11.824 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 2 at Y-position 59.91064453125, Z-Position -0.171794139690924. ------
17-03-18 03:11:11.824 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:11.824 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17811 mm
17-03-18 03:11:11.824 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:11.824 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:11:11.824 -07 000000591 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:11:11.824 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 38908, sync = True, waitForSettling = False)
17-03-18 03:11:11.824 -07 000000467 INF: Z Motor: Moving to -0.178109 mm, started at -0.171794 mm, distance = -6.32 um
17-03-18 03:11:11.834 -07 000000467 INF: FPGA: Xmit ZDACW 38908\n [Z Motor]
17-03-18 03:11:11.834 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:11.834 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 5 ms overall
17-03-18 03:11:11.834 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:11:11.844 -07 000000467 INF: FPGA: 'ZDACW 38908' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:11:11.844 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:11.844 -07 000000501 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:11:11.854 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 21 ms overall
17-03-18 03:11:11.854 -07 000000591 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:11.854 -07 000000591 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:11.854 -07 000000591 INF: Y Motor: Moving 1331 steps2
17-03-18 03:11:11.854 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:11:11.864 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:11.864 -07 000000618 INF: FPGA: Recv ZDACR 38908
17-03-18 03:11:11.874 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:11:11.874 -07 000000467 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-18 03:11:11.874 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:12.034 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 404 ms.
17-03-18 03:11:12.034 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:11:12.034 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:12.034 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 03:11:12.034 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:11:12.034 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:12.044 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 11 ms.
17-03-18 03:11:12.044 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 416 ms.
17-03-18 03:11:12.044 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 03:11:12.054 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-18 03:11:12.054 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:11:12.054 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 221 ms overall
17-03-18 03:11:12.244 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:11:12.244 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:11:12.284 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:12.294 -07 000000502 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:11:12.294 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:11:12.294 -07 000000591 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:12.294 -07 000000591 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:11:12.294 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.832 mm, average velocity = 2.090 mm/sec
17-03-18 03:11:13.244 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:13.244 -07 000000606 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:11:13.254 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:13.254 -07 000000591 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:13.284 -07 000000591 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:13.284 -07 000000591 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:13.284 -07 000000591 INF: Y Motor: Moved to 60.7329 after 1452 ms (table move)
17-03-18 03:11:13.284 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178109 mm (DAC = 38908)
17-03-18 03:11:13.284 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.284 -07 000000501 INF: FPGA: Recv ZSGSRD 37019
17-03-18 03:11:13.294 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:13.294 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.294 -07 000000618 INF: FPGA: Recv ZSGSRD 37011
17-03-18 03:11:13.304 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.304 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.304 -07 000000569 INF: FPGA: Recv ZSGSRD 37016
17-03-18 03:11:13.314 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.314 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.314 -07 000000590 INF: FPGA: Recv ZSGSRD 37017
17-03-18 03:11:13.324 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.324 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.324 -07 000000512 INF: FPGA: Recv ZSGSRD 37023
17-03-18 03:11:13.334 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.334 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.334 -07 000000462 INF: FPGA: Recv ZSGSRD 37018
17-03-18 03:11:13.344 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.344 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.344 -07 000000618 INF: FPGA: Recv ZSGSRD 37014
17-03-18 03:11:13.354 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.354 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.354 -07 000000569 INF: FPGA: Recv ZSGSRD 37015
17-03-18 03:11:13.364 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.364 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.364 -07 000000626 INF: FPGA: Recv ZSGSRD 37013
17-03-18 03:11:13.374 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.374 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:13.374 -07 000000579 INF: FPGA: Recv ZSGSRD 37015
17-03-18 03:11:13.384 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:13.384 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:13.384 -07 000000561 INF: FPGA: Recv ZPIEZORD 33230
17-03-18 03:11:13.394 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:13.394 -07 000000430 INF: Z Motor: Piezo is near 51.0 V (nominally 0 to 100 V), expect near 59.4 V, since DAC is at 5.937 V. Piezo Error = -8.4 V.
17-03-18 03:11:13.394 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.1 um, Read 10 ADC samples: Avg = 37016 (-177.2 uncal um), Error = 0.9 uncal um, Median = 37016 (-177.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 37011 (-177.2 uncal um), Max = 37023 (-177.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:11:13.394 -07 000000430 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37016, posNoise = 7, negNoise = 5
17-03-18 03:11:13.394 -07 000000430 INF: Z Motor: After move to -0.178109, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:13.394 -07 000000430 INF: Z Motor: Settle wait time = 1455 ms, measure time = 106 ms (allowed 150 ms), total time = 1561 ms
17-03-18 03:11:13.394 -07 000000430 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:13.444 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1613 ms
17-03-18 03:11:13.444 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:13.444 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:13.444 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:13.444 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:13.444 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:13.444 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:11:13.444 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:13.444 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:13.444 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:11:13.454 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:13.454 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:11:13.464 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:11:13.464 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:11:13.464 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:11:13.514 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:11:13.814 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:11:13.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:11:13.814 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:11:13.814 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2404847376, 0x0, 559484976) start.
17-03-18 03:11:13.854 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:11:13.854 -07 000000424 INF: FPGA: Recv CAMSNAP
17-03-18 03:11:13.854 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 385 ms overall
17-03-18 03:11:13.934 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2404847376, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:11:13.934 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:13.944 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:11:13.944 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:11:13.954 -07 000000461 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:13.954 -07 000000502 INF: Autofocus start
17-03-18 03:11:13.954 -07 000000502 INF: MeasureProfile start
17-03-18 03:11:13.954 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:13.964 -07 000000461 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:13.964 -07 000000461 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:11:13.964 -07 000000502 INF: MeasureProfile done
17-03-18 03:11:13.964 -07 000000502 INF: X=0  Z correction [um]=-0.0713522
17-03-18 03:11:13.964 -07 000000502 INF: Autofocus finished
17-03-18 03:11:14.164 -07 000000430 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:11:14.164 -07 000000461 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:11:14.164 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.178121988650559. ----------
17-03-18 03:11:14.164 -07 000000610 INF: Cycle	109	Tile	2	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:14.174 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37405, sync = True, waitForSettling = True)
17-03-18 03:11:14.174 -07 000000610 INF: Z Motor: Moving to -0.171229 mm, started at -0.178122 mm, distance = 6.89 um
17-03-18 03:11:14.174 -07 000000610 INF: FPGA: Xmit ZDACW 37405\n [Z Motor]
17-03-18 03:11:14.174 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:11:14.184 -07 000000610 INF: FPGA: 'ZDACW 37405' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.184 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:14.184 -07 000000629 INF: FPGA: Recv ZDACR 37405
17-03-18 03:11:14.194 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.194 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:14.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.344 -07 000000467 INF: FPGA: Recv ZSGSRD 35951
17-03-18 03:11:14.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.354 -07 000000618 INF: FPGA: Recv ZSGSRD 35951
17-03-18 03:11:14.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.364 -07 000000606 INF: FPGA: Recv ZSGSRD 35945
17-03-18 03:11:14.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.374 -07 000000444 INF: FPGA: Recv ZSGSRD 35944
17-03-18 03:11:14.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.384 -07 000000626 INF: FPGA: Recv ZSGSRD 35943
17-03-18 03:11:14.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.394 -07 000000455 INF: FPGA: Recv ZSGSRD 35946
17-03-18 03:11:14.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.404 -07 000000591 INF: FPGA: Recv ZSGSRD 35944
17-03-18 03:11:14.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.414 -07 000000462 INF: FPGA: Recv ZSGSRD 35942
17-03-18 03:11:14.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.424 -07 000000561 INF: FPGA: Recv ZSGSRD 35942
17-03-18 03:11:14.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:14.434 -07 000000512 INF: FPGA: Recv ZSGSRD 35941
17-03-18 03:11:14.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:14.454 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:14.454 -07 000000455 INF: FPGA: Recv ZPIEZORD 31808
17-03-18 03:11:14.464 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:11:14.464 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.708 V. Piezo Error = -9.1 V.
17-03-18 03:11:14.464 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35945 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35944 (-170.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35941 (-170.3 uncal um), Max = 35951 (-170.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:14.464 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35945, posNoise = 6, negNoise = 4
17-03-18 03:11:14.464 -07 000000610 INF: Z Motor: After move to -0.171229, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:14.464 -07 000000610 INF: Z Motor: MoveAbsStepped took 291 ms)
17-03-18 03:11:14.464 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:14.464 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:14.464 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:14.464 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:14.464 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:14.464 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:14.464 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:14.464 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:14.464 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 03:11:14.464 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:14.464 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:14.464 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:14.474 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:14.474 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:14.474 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:14.474 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:14.484 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:14.484 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:11:14.484 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:14.484 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 24 ms.
17-03-18 03:11:14.494 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37581 150\n [Camera]
17-03-18 03:11:14.694 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:14.764 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.958108,
17-03-18 03:11:15.094 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:15.094 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:15.094 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:15.094 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:15.094 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:11:15.094 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:15.094 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:15.094 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:15.094 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:15.094 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:11:15.284 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37581 787
17-03-18 03:11:15.434 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:15.494 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:11:15.494 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:11:15.494 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:15.494 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:11:15.494 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:11:15.494 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:15.494 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:15.494 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:11:15.504 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:15.504 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 03:11:15.624 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:15.624 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:15.624 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:15.624 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:15.624 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:11:15.634 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:15.634 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:15.634 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:15.634 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:15.634 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:11:15.814 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:15.824 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:15.824 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37581 150' command took 2 ms to send, 1320 ms to get response, and 1329 ms overall
17-03-18 03:11:15.824 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171888
17-03-18 03:11:15.824 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17189 mm
17-03-18 03:11:15.824 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:15.824 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:11:15.824 -07 000000461 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 03:11:15.824 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:15.824 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 37549, sync = True, waitForSettling = False)
17-03-18 03:11:15.824 -07 000000591 INF: Z Motor: Moving to -0.171888 mm, started at -0.171242 mm, distance = -0.65 um
17-03-18 03:11:15.824 -07 000000606 INF: FPGA: Recv YRDPOS 124381
17-03-18 03:11:15.834 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:15.834 -07 000000461 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:15.834 -07 000000461 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:15.834 -07 000000461 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:11:15.834 -07 000000591 INF: FPGA: Xmit ZDACW 37549\n [Z Motor]
17-03-18 03:11:15.834 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:11:15.844 -07 000000591 INF: FPGA: 'ZDACW 37549' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:11:15.844 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:15.854 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:15.854 -07 000000579 INF: FPGA: Recv ZDACR 37549
17-03-18 03:11:15.864 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 03:11:15.864 -07 000000591 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:11:16.024 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 03:11:16.024 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:11:16.024 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:16.024 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:11:16.024 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:11:16.024 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:16.024 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:16.034 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:11:16.034 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 03:11:16.034 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:11:16.214 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:11:16.214 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:11:16.264 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:16.264 -07 000000606 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:11:16.274 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:16.274 -07 000000461 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:16.274 -07 000000461 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:11:16.274 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.164 mm/sec
17-03-18 03:11:16.554 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:16.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:17.224 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:17.224 -07 000000590 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:11:17.234 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:17.234 -07 000000461 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:17.294 -07 000000461 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:17.294 -07 000000461 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:11:17.294 -07 000000461 INF: Y Motor: Moved to 61.5640 after 1473 ms (table move)
17-03-18 03:11:17.304 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171888 mm (DAC = 37549)
17-03-18 03:11:17.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.304 -07 000000444 INF: FPGA: Recv ZSGSRD 36048
17-03-18 03:11:17.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:17.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.314 -07 000000579 INF: FPGA: Recv ZSGSRD 36049
17-03-18 03:11:17.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.324 -07 000000430 INF: FPGA: Recv ZSGSRD 36042
17-03-18 03:11:17.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.334 -07 000000512 INF: FPGA: Recv ZSGSRD 36045
17-03-18 03:11:17.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.344 -07 000000502 INF: FPGA: Recv ZSGSRD 36046
17-03-18 03:11:17.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.354 -07 000000501 INF: FPGA: Recv ZSGSRD 36041
17-03-18 03:11:17.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.364 -07 000000579 INF: FPGA: Recv ZSGSRD 36052
17-03-18 03:11:17.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.374 -07 000000430 INF: FPGA: Recv ZSGSRD 36054
17-03-18 03:11:17.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.384 -07 000000424 INF: FPGA: Recv ZSGSRD 36048
17-03-18 03:11:17.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.394 -07 000000561 INF: FPGA: Recv ZSGSRD 36048
17-03-18 03:11:17.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:17.404 -07 000000576 INF: FPGA: Recv ZPIEZORD 31971
17-03-18 03:11:17.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.414 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.730 V. Piezo Error = -9.0 V.
17-03-18 03:11:17.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36047 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36048 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36041 (-171.0 uncal um), Max = 36054 (-171.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:17.414 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36047, posNoise = 7, negNoise = 6
17-03-18 03:11:17.414 -07 000000610 INF: Z Motor: After move to -0.171888, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:17.414 -07 000000610 INF: Z Motor: Settle wait time = 1478 ms, measure time = 107 ms (allowed 150 ms), total time = 1585 ms
17-03-18 03:11:17.414 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:17.464 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1637 ms
17-03-18 03:11:17.464 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:17.464 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.171896927085192. ----------
17-03-18 03:11:17.464 -07 000000610 INF: Cycle	109	Tile	3	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:17.464 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37372, sync = True, waitForSettling = True)
17-03-18 03:11:17.464 -07 000000610 INF: Z Motor: Moving to -0.171078 mm, started at -0.171897 mm, distance = 0.82 um
17-03-18 03:11:17.464 -07 000000610 INF: FPGA: Xmit ZDACW 37372\n [Z Motor]
17-03-18 03:11:17.464 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:11:17.474 -07 000000610 INF: FPGA: 'ZDACW 37372' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:17.474 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:17.474 -07 000000591 INF: FPGA: Recv ZDACR 37372
17-03-18 03:11:17.484 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.484 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:17.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.634 -07 000000569 INF: FPGA: Recv ZSGSRD 35927
17-03-18 03:11:17.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.644 -07 000000462 INF: FPGA: Recv ZSGSRD 35919
17-03-18 03:11:17.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.654 -07 000000455 INF: FPGA: Recv ZSGSRD 35919
17-03-18 03:11:17.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.664 -07 000000629 INF: FPGA: Recv ZSGSRD 35922
17-03-18 03:11:17.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.674 -07 000000591 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:11:17.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.684 -07 000000424 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:11:17.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.694 -07 000000590 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:11:17.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.704 -07 000000461 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:11:17.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.714 -07 000000626 INF: FPGA: Recv ZSGSRD 35919
17-03-18 03:11:17.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:17.724 -07 000000591 INF: FPGA: Recv ZSGSRD 35921
17-03-18 03:11:17.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.734 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:17.734 -07 000000606 INF: FPGA: Recv ZPIEZORD 31794
17-03-18 03:11:17.744 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:17.744 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.703 V. Piezo Error = -9.1 V.
17-03-18 03:11:17.744 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35922 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35921 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35919 (-170.2 uncal um), Max = 35927 (-170.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:11:17.744 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35922, posNoise = 5, negNoise = 3
17-03-18 03:11:17.744 -07 000000610 INF: Z Motor: After move to -0.171078, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:17.744 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:17.744 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:17.744 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:17.744 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:17.744 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:17.744 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:17.744 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:17.744 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:17.744 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:11:17.744 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:17.744 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:17.744 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:17.744 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:17.744 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:11:17.744 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:17.754 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:17.754 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:17.754 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:11:17.754 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:11:17.764 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:11:17.764 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 03:11:17.764 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37549 150\n [Camera]
17-03-18 03:11:17.964 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:18.364 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:18.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:18.364 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:18.364 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:18.364 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:11:18.364 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:18.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:18.364 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:18.364 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:18.364 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:11:18.554 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37549 787
17-03-18 03:11:18.704 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:18.754 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:11:18.754 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:11:18.754 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:18.754 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:11:18.754 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:11:18.754 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:18.754 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:18.754 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:11:18.754 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:18.764 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 03:11:18.904 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:18.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:18.904 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:18.904 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:18.904 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:11:18.904 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:18.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:18.904 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:18.904 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:18.904 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:11:19.094 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:11:19.094 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:19.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37549 150' command took 2 ms to send, 1322 ms to get response, and 1329 ms overall
17-03-18 03:11:19.094 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171405
17-03-18 03:11:19.094 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17141 mm
17-03-18 03:11:19.094 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:19.094 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:11:19.094 -07 000000626 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 03:11:19.094 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 37443, sync = True, waitForSettling = False)
17-03-18 03:11:19.094 -07 000000561 INF: Z Motor: Moving to -0.171403 mm, started at -0.171094 mm, distance = -0.31 um
17-03-18 03:11:19.094 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:19.104 -07 000000444 INF: FPGA: Recv YRDPOS 126083
17-03-18 03:11:19.104 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:11:19.104 -07 000000626 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:19.104 -07 000000626 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:19.104 -07 000000626 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:11:19.104 -07 000000561 INF: FPGA: Xmit ZDACW 37443\n [Z Motor]
17-03-18 03:11:19.104 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:11:19.114 -07 000000561 INF: FPGA: 'ZDACW 37443' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:11:19.114 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:19.114 -07 000000462 INF: FPGA: Recv ZDACR 37443
17-03-18 03:11:19.124 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:19.124 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:19.124 -07 000000561 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:11:19.284 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:11:19.284 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:11:19.284 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:19.284 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 03:11:19.284 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:11:19.294 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:19.294 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:11:19.294 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:19.294 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:11:19.304 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:11:19.494 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:11:19.494 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:11:19.544 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:19.554 -07 000000579 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:11:19.554 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 7 ms overall
17-03-18 03:11:19.554 -07 000000626 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:19.554 -07 000000626 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:11:19.554 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.112 mm/sec
17-03-18 03:11:20.124 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.999021,
17-03-18 03:11:20.504 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:20.504 -07 000000462 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:11:20.514 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.514 -07 000000626 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:20.534 -07 000000626 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:20.534 -07 000000626 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:20.534 -07 000000626 INF: Y Motor: Moved to 62.3955 after 1441 ms (table move)
17-03-18 03:11:20.544 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171403 mm (DAC = 37443)
17-03-18 03:11:20.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.544 -07 000000502 INF: FPGA: Recv ZSGSRD 35976
17-03-18 03:11:20.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:11:20.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.554 -07 000000579 INF: FPGA: Recv ZSGSRD 35976
17-03-18 03:11:20.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.564 -07 000000576 INF: FPGA: Recv ZSGSRD 35975
17-03-18 03:11:20.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.574 -07 000000455 INF: FPGA: Recv ZSGSRD 35974
17-03-18 03:11:20.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.584 -07 000000461 INF: FPGA: Recv ZSGSRD 35970
17-03-18 03:11:20.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.594 -07 000000629 INF: FPGA: Recv ZSGSRD 35972
17-03-18 03:11:20.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.604 -07 000000579 INF: FPGA: Recv ZSGSRD 35965
17-03-18 03:11:20.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.614 -07 000000512 INF: FPGA: Recv ZSGSRD 35970
17-03-18 03:11:20.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.624 -07 000000424 INF: FPGA: Recv ZSGSRD 35972
17-03-18 03:11:20.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.634 -07 000000461 INF: FPGA: Recv ZSGSRD 35969
17-03-18 03:11:20.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:20.644 -07 000000502 INF: FPGA: Recv ZPIEZORD 31840
17-03-18 03:11:20.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.654 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.713 V. Piezo Error = -9.1 V.
17-03-18 03:11:20.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35972 (-170.5 uncal um), Error = 0.9 uncal um, Median = 35972 (-170.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35965 (-170.5 uncal um), Max = 35976 (-170.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:11:20.654 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35972, posNoise = 4, negNoise = 7
17-03-18 03:11:20.654 -07 000000610 INF: Z Motor: After move to -0.171403, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:20.654 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 108 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:11:20.654 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:20.704 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:11:20.704 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:20.704 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.17141511117456. ----------
17-03-18 03:11:20.704 -07 000000610 INF: Cycle	109	Tile	4	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:20.704 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37267, sync = True, waitForSettling = True)
17-03-18 03:11:20.704 -07 000000610 INF: Z Motor: Moving to -0.170597 mm, started at -0.171415 mm, distance = 0.82 um
17-03-18 03:11:20.704 -07 000000610 INF: FPGA: Xmit ZDACW 37267\n [Z Motor]
17-03-18 03:11:20.704 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:11:20.714 -07 000000610 INF: FPGA: 'ZDACW 37267' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:20.714 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:20.714 -07 000000501 INF: FPGA: Recv ZDACR 37267
17-03-18 03:11:20.724 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:20.724 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:20.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.874 -07 000000629 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:11:20.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:20.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.884 -07 000000591 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:11:20.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.894 -07 000000502 INF: FPGA: Recv ZSGSRD 35844
17-03-18 03:11:20.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.904 -07 000000455 INF: FPGA: Recv ZSGSRD 35847
17-03-18 03:11:20.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.914 -07 000000461 INF: FPGA: Recv ZSGSRD 35844
17-03-18 03:11:20.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.924 -07 000000629 INF: FPGA: Recv ZSGSRD 35843
17-03-18 03:11:20.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.934 -07 000000576 INF: FPGA: Recv ZSGSRD 35845
17-03-18 03:11:20.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.944 -07 000000561 INF: FPGA: Recv ZSGSRD 35845
17-03-18 03:11:20.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.954 -07 000000590 INF: FPGA: Recv ZSGSRD 35850
17-03-18 03:11:20.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:20.964 -07 000000569 INF: FPGA: Recv ZSGSRD 35851
17-03-18 03:11:20.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.974 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:20.974 -07 000000430 INF: FPGA: Recv ZPIEZORD 31655
17-03-18 03:11:20.984 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:20.984 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.687 V. Piezo Error = -9.2 V.
17-03-18 03:11:20.984 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35847 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35846 (-169.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35843 (-169.7 uncal um), Max = 35851 (-169.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:20.984 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35847, posNoise = 4, negNoise = 4
17-03-18 03:11:20.984 -07 000000610 INF: Z Motor: After move to -0.170597, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:20.984 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:20.984 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:20.984 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:20.984 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:20.984 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:20.984 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:20.984 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:20.984 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:20.984 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:20.984 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:20.984 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:20.984 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:11:20.984 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:20.984 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:20.984 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:20.994 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:11:20.994 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:21.004 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:11:21.004 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 03:11:21.004 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 03:11:21.004 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:21.004 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37443 150\n [Camera]
17-03-18 03:11:21.204 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:21.554 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:21.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:21.614 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:21.614 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:21.614 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:21.614 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:21.614 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:11:21.614 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:21.614 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:21.614 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:21.614 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:21.614 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:11:21.804 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37443 787
17-03-18 03:11:21.954 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:21.984 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:11:21.984 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:11:21.984 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:21.984 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:11:21.994 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:11:21.994 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:21.994 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:21.994 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:21.994 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:11:21.994 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:11:22.144 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:22.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:22.144 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:22.144 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:22.144 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:11:22.154 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:22.154 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:22.154 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:22.154 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:22.154 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:11:22.334 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:22.334 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:22.334 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37443 150' command took 2 ms to send, 1318 ms to get response, and 1329 ms overall
17-03-18 03:11:22.344 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171083
17-03-18 03:11:22.344 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17108 mm
17-03-18 03:11:22.344 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:22.344 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:11:22.344 -07 000000501 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 03:11:22.344 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:22.344 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 37373, sync = True, waitForSettling = False)
17-03-18 03:11:22.344 -07 000000629 INF: Z Motor: Moving to -0.171083 mm, started at -0.170612 mm, distance = -0.47 um
17-03-18 03:11:22.344 -07 000000512 INF: FPGA: Recv YRDPOS 127786
17-03-18 03:11:22.354 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:22.354 -07 000000629 INF: FPGA: Xmit ZDACW 37373\n [Z Motor]
17-03-18 03:11:22.354 -07 000000501 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:22.354 -07 000000501 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:22.354 -07 000000501 INF: Y Motor: Moving 1339 steps-15
17-03-18 03:11:22.354 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:11:22.364 -07 000000629 INF: FPGA: 'ZDACW 37373' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:11:22.364 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:22.364 -07 000000424 INF: FPGA: Recv ZDACR 37373
17-03-18 03:11:22.374 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:22.374 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:22.374 -07 000000629 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:11:22.534 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:11:22.534 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:11:22.534 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:22.534 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 03:11:22.534 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:11:22.534 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:22.544 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:22.544 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:11:22.544 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:22.554 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:11:22.754 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:11:22.754 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 03:11:22.794 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:22.804 -07 000000502 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:11:22.814 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:22.814 -07 000000501 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:22.814 -07 000000501 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 03:11:22.814 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.837 mm, average velocity = 2.093 mm/sec
17-03-18 03:11:23.764 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:23.764 -07 000000461 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:11:23.774 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:23.774 -07 000000501 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:23.794 -07 000000501 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:23.794 -07 000000501 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:23.794 -07 000000501 INF: Y Motor: Moved to 63.2241 after 1454 ms (table move)
17-03-18 03:11:23.804 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171083 mm (DAC = 37373)
17-03-18 03:11:23.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.804 -07 000000569 INF: FPGA: Recv ZSGSRD 35916
17-03-18 03:11:23.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:23.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.814 -07 000000444 INF: FPGA: Recv ZSGSRD 35925
17-03-18 03:11:23.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.824 -07 000000455 INF: FPGA: Recv ZSGSRD 35922
17-03-18 03:11:23.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.834 -07 000000579 INF: FPGA: Recv ZSGSRD 35919
17-03-18 03:11:23.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.844 -07 000000590 INF: FPGA: Recv ZSGSRD 35924
17-03-18 03:11:23.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.854 -07 000000512 INF: FPGA: Recv ZSGSRD 35919
17-03-18 03:11:23.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.864 -07 000000591 INF: FPGA: Recv ZSGSRD 35917
17-03-18 03:11:23.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.874 -07 000000424 INF: FPGA: Recv ZSGSRD 35924
17-03-18 03:11:23.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.884 -07 000000430 INF: FPGA: Recv ZSGSRD 35924
17-03-18 03:11:23.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:23.894 -07 000000618 INF: FPGA: Recv ZSGSRD 35924
17-03-18 03:11:23.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.904 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:23.904 -07 000000606 INF: FPGA: Recv ZPIEZORD 31798
17-03-18 03:11:23.914 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.914 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.703 V. Piezo Error = -9.1 V.
17-03-18 03:11:23.914 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35921 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35923 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35916 (-170.2 uncal um), Max = 35925 (-170.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:11:23.914 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35921, posNoise = 4, negNoise = 5
17-03-18 03:11:23.914 -07 000000610 INF: Z Motor: After move to -0.171083, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:23.914 -07 000000610 INF: Z Motor: Settle wait time = 1456 ms, measure time = 109 ms (allowed 150 ms), total time = 1565 ms
17-03-18 03:11:23.914 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:23.964 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1617 ms
17-03-18 03:11:23.964 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:23.964 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.17108747635533. ----------
17-03-18 03:11:23.964 -07 000000610 INF: Cycle	109	Tile	5	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:23.964 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37196, sync = True, waitForSettling = True)
17-03-18 03:11:23.964 -07 000000610 INF: Z Motor: Moving to -0.170272 mm, started at -0.171087 mm, distance = 0.82 um
17-03-18 03:11:23.964 -07 000000610 INF: FPGA: Xmit ZDACW 37196\n [Z Motor]
17-03-18 03:11:23.964 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:11:23.974 -07 000000610 INF: FPGA: 'ZDACW 37196' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:23.974 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:23.974 -07 000000467 INF: FPGA: Recv ZDACR 37196
17-03-18 03:11:23.984 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:23.984 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:24.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.134 -07 000000629 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:11:24.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:24.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.144 -07 000000455 INF: FPGA: Recv ZSGSRD 35800
17-03-18 03:11:24.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.154 -07 000000591 INF: FPGA: Recv ZSGSRD 35799
17-03-18 03:11:24.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.164 -07 000000618 INF: FPGA: Recv ZSGSRD 35799
17-03-18 03:11:24.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.174 -07 000000467 INF: FPGA: Recv ZSGSRD 35797
17-03-18 03:11:24.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.184 -07 000000629 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:11:24.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.194 -07 000000501 INF: FPGA: Recv ZSGSRD 35802
17-03-18 03:11:24.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.204 -07 000000606 INF: FPGA: Recv ZSGSRD 35790
17-03-18 03:11:24.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.214 -07 000000629 INF: FPGA: Recv ZSGSRD 35798
17-03-18 03:11:24.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:24.224 -07 000000576 INF: FPGA: Recv ZSGSRD 35798
17-03-18 03:11:24.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.234 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:24.234 -07 000000430 INF: FPGA: Recv ZPIEZORD 31578
17-03-18 03:11:24.244 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:24.244 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.676 V. Piezo Error = -9.3 V.
17-03-18 03:11:24.244 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35796 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35798 (-169.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35790 (-169.4 uncal um), Max = 35802 (-169.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:24.244 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35796, posNoise = 6, negNoise = 6
17-03-18 03:11:24.244 -07 000000610 INF: Z Motor: After move to -0.170272, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:24.244 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:24.244 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:24.244 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:24.244 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:24.244 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:24.244 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:24.244 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:24.244 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:24.244 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:24.244 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:24.244 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:24.244 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:24.244 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:24.254 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:11:24.254 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:24.254 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:24.254 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:24.264 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:24.264 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:11:24.264 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:24.264 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:24.274 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37373 150\n [Camera]
17-03-18 03:11:24.464 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:24.874 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:24.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:24.874 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:24.874 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:24.874 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:11:24.874 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:24.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:24.874 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:24.874 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:24.874 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:11:25.064 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37373 787
17-03-18 03:11:25.214 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:25.254 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:11:25.254 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:11:25.254 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:25.254 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:11:25.254 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:11:25.254 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:25.254 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:25.254 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:11:25.254 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:25.264 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:11:25.404 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:25.404 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:25.404 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:25.404 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:25.404 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:11:25.414 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:25.414 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:25.414 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:25.414 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:25.554 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:11:25.564 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.981281,
17-03-18 03:11:25.594 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:25.604 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:25.604 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37373 150' command took 2 ms to send, 1320 ms to get response, and 1329 ms overall
17-03-18 03:11:25.604 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:11:25.604 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 6 at Y-position 63.22412109375, Z-Position -0.17028444983761. ------
17-03-18 03:11:25.604 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:25.604 -07 000000467 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17675 mm
17-03-18 03:11:25.604 -07 000000467 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:25.614 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:25.614 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:11:25.614 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:11:25.614 -07 000000462 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 03:11:25.614 -07 000000629 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:11:25.614 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 38611, sync = True, waitForSettling = False)
17-03-18 03:11:25.614 -07 000000618 INF: Z Motor: Moving to -0.176750 mm, started at -0.170284 mm, distance = -6.47 um
17-03-18 03:11:25.624 -07 000000618 INF: FPGA: Xmit ZDACW 38611\n [Z Motor]
17-03-18 03:11:25.624 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:11:25.634 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:25.634 -07 000000618 INF: FPGA: 'ZDACW 38611' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:11:25.634 -07 000000512 INF: FPGA: Recv YRDPOS 129483
17-03-18 03:11:25.644 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:11:25.644 -07 000000462 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:25.644 -07 000000462 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:25.644 -07 000000462 INF: Y Motor: Moving 1342 steps-17
17-03-18 03:11:25.644 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:25.644 -07 000000579 INF: FPGA: Recv ZDACR 38611
17-03-18 03:11:25.654 -07 000000618 INF: FPGA: 'ZDACR' command took 5 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:11:25.654 -07 000000618 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 03:11:25.654 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:25.804 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:11:25.814 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:11:25.814 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:25.814 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:25.814 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:11:25.814 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:11:25.814 -07 000000629 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:11:25.934 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:11:25.934 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 523 ms.
17-03-18 03:11:25.934 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:25.934 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:25.944 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 532 ms.
17-03-18 03:11:26.024 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:11:26.024 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 03:11:26.074 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:26.074 -07 000000576 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:11:26.084 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:11:26.084 -07 000000462 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:26.084 -07 000000462 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-18 03:11:26.084 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.838 mm, average velocity = 2.184 mm/sec
17-03-18 03:11:26.554 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:26.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:27.034 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:27.034 -07 000000424 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:11:27.044 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:27.044 -07 000000462 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:27.064 -07 000000462 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:27.064 -07 000000462 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:11:27.064 -07 000000462 INF: Y Motor: Moved to 64.0571 after 1454 ms (table move)
17-03-18 03:11:27.064 -07 000000467 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176750 mm (DAC = 38611)
17-03-18 03:11:27.064 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.074 -07 000000591 INF: FPGA: Recv ZSGSRD 36811
17-03-18 03:11:27.074 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:11:27.074 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.074 -07 000000444 INF: FPGA: Recv ZSGSRD 36803
17-03-18 03:11:27.084 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:27.084 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.084 -07 000000455 INF: FPGA: Recv ZSGSRD 36805
17-03-18 03:11:27.094 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.094 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.094 -07 000000430 INF: FPGA: Recv ZSGSRD 36805
17-03-18 03:11:27.104 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.104 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.104 -07 000000424 INF: FPGA: Recv ZSGSRD 36805
17-03-18 03:11:27.114 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.114 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.114 -07 000000591 INF: FPGA: Recv ZSGSRD 36803
17-03-18 03:11:27.124 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.124 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.124 -07 000000626 INF: FPGA: Recv ZSGSRD 36798
17-03-18 03:11:27.134 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.134 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.134 -07 000000579 INF: FPGA: Recv ZSGSRD 36804
17-03-18 03:11:27.144 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.144 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.144 -07 000000618 INF: FPGA: Recv ZSGSRD 36802
17-03-18 03:11:27.154 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.154 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:27.154 -07 000000590 INF: FPGA: Recv ZSGSRD 36801
17-03-18 03:11:27.164 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.164 -07 000000467 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:27.164 -07 000000455 INF: FPGA: Recv ZPIEZORD 32949
17-03-18 03:11:27.174 -07 000000467 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.174 -07 000000467 INF: Z Motor: Piezo is near 50.4 V (nominally 0 to 100 V), expect near 58.9 V, since DAC is at 5.892 V. Piezo Error = -8.5 V.
17-03-18 03:11:27.174 -07 000000467 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.7 um, Read 10 ADC samples: Avg = 36804 (-175.9 uncal um), Error = 0.9 uncal um, Median = 36804 (-175.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36798 (-175.8 uncal um), Max = 36811 (-175.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:27.174 -07 000000467 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36804, posNoise = 7, negNoise = 6
17-03-18 03:11:27.174 -07 000000467 INF: Z Motor: After move to -0.176750, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:27.174 -07 000000467 INF: Z Motor: Settle wait time = 1457 ms, measure time = 101 ms (allowed 150 ms), total time = 1558 ms
17-03-18 03:11:27.174 -07 000000467 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:27.224 -07 000000467 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:11:27.224 -07 000000467 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:27.224 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:27.224 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:27.224 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:27.224 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:27.224 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:11:27.224 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:27.224 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:27.224 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:11:27.234 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:11:27.234 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:11:27.244 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:11:27.244 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:11:27.244 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:11:27.294 -07 000000591 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:11:27.594 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:11:27.594 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:11:27.594 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:11:27.594 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 03:11:27.634 -07 000000502 INF: FPGA: Recv @CAMSNAP 382
17-03-18 03:11:27.634 -07 000000629 INF: FPGA: Recv CAMSNAP
17-03-18 03:11:27.634 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 386 ms to get response, and 390 ms overall
17-03-18 03:11:27.724 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:11:27.724 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:27.724 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:11:27.724 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 03:11:27.734 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:27.734 -07 000000606 INF: Autofocus start
17-03-18 03:11:27.734 -07 000000606 INF: MeasureProfile start
17-03-18 03:11:27.734 -07 000000629 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:27.744 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:27.744 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:11:27.744 -07 000000606 INF: MeasureProfile done
17-03-18 03:11:27.744 -07 000000606 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:11:27.744 -07 000000606 INF: Autofocus finished
17-03-18 03:11:27.944 -07 000000618 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:11:27.944 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:11:27.944 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.176760055676505. ----------
17-03-18 03:11:27.944 -07 000000610 INF: Cycle	109	Tile	6	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:27.954 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37126, sync = True, waitForSettling = True)
17-03-18 03:11:27.954 -07 000000610 INF: Z Motor: Moving to -0.169952 mm, started at -0.176760 mm, distance = 6.81 um
17-03-18 03:11:27.954 -07 000000610 INF: FPGA: Xmit ZDACW 37126\n [Z Motor]
17-03-18 03:11:27.954 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:11:27.964 -07 000000610 INF: FPGA: 'ZDACW 37126' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:27.964 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:27.964 -07 000000430 INF: FPGA: Recv ZDACR 37126
17-03-18 03:11:27.974 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:27.974 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:28.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.124 -07 000000629 INF: FPGA: Recv ZSGSRD 35748
17-03-18 03:11:28.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:28.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.134 -07 000000424 INF: FPGA: Recv ZSGSRD 35744
17-03-18 03:11:28.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.144 -07 000000455 INF: FPGA: Recv ZSGSRD 35748
17-03-18 03:11:28.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.154 -07 000000461 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:11:28.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.164 -07 000000576 INF: FPGA: Recv ZSGSRD 35747
17-03-18 03:11:28.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.174 -07 000000569 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:11:28.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.184 -07 000000591 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:11:28.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.194 -07 000000579 INF: FPGA: Recv ZSGSRD 35747
17-03-18 03:11:28.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.204 -07 000000502 INF: FPGA: Recv ZSGSRD 35745
17-03-18 03:11:28.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:28.214 -07 000000576 INF: FPGA: Recv ZSGSRD 35743
17-03-18 03:11:28.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.224 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:28.224 -07 000000444 INF: FPGA: Recv ZPIEZORD 31500
17-03-18 03:11:28.234 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:28.234 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.665 V. Piezo Error = -9.4 V.
17-03-18 03:11:28.234 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35745 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35745 (-169.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 35743 (-169.1 uncal um), Max = 35748 (-169.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-18 03:11:28.234 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35745, posNoise = 3, negNoise = 2
17-03-18 03:11:28.234 -07 000000610 INF: Z Motor: After move to -0.169952, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:28.234 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:11:28.234 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:28.234 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:28.234 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:28.234 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:28.234 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:28.234 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:28.234 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:28.234 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:28.234 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:28.234 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:28.234 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:28.234 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:28.244 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:28.244 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:28.244 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:11:28.244 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:28.254 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:28.254 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:11:28.254 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:11:28.254 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:11:28.254 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37302 150\n [Camera]
17-03-18 03:11:28.454 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:28.864 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:28.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:28.864 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:28.864 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:28.864 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:28.864 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:28.864 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:28.864 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 594000200, 0x0, 391868352) start.
17-03-18 03:11:28.874 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:28.874 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:11:29.054 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37302 789
17-03-18 03:11:29.204 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:29.234 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 594000200, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:11:29.234 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:11:29.234 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:29.244 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:11:29.244 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:11:29.244 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:29.244 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:29.244 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:11:29.244 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:29.254 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:11:29.394 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:29.394 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:29.394 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:29.394 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:29.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:29.404 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:29.524 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:29.524 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:11:29.534 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:29.534 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:11:29.584 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:29.584 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:29.584 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37302 150' command took 2 ms to send, 1317 ms to get response, and 1330 ms overall
17-03-18 03:11:29.584 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170406
17-03-18 03:11:29.594 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17041 mm
17-03-18 03:11:29.594 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:29.594 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:11:29.594 -07 000000424 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 03:11:29.594 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:29.594 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37225, sync = True, waitForSettling = False)
17-03-18 03:11:29.594 -07 000000618 INF: Z Motor: Moving to -0.170405 mm, started at -0.169957 mm, distance = -0.45 um
17-03-18 03:11:29.594 -07 000000430 INF: FPGA: Recv YRDPOS 131189
17-03-18 03:11:29.604 -07 000000618 INF: FPGA: Xmit ZDACW 37225\n [Z Motor]
17-03-18 03:11:29.604 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:29.604 -07 000000424 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:29.604 -07 000000424 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:29.604 -07 000000424 INF: Y Motor: Moving 1337 steps-12
17-03-18 03:11:29.604 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:11:29.614 -07 000000618 INF: FPGA: 'ZDACW 37225' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:11:29.614 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:29.614 -07 000000579 INF: FPGA: Recv ZDACR 37225
17-03-18 03:11:29.624 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:29.624 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:29.624 -07 000000618 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:11:29.914 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 03:11:29.914 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 03:11:29.914 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:29.914 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:11:29.914 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:11:29.914 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:29.914 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:29.924 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:29.924 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 523 ms.
17-03-18 03:11:29.924 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 525 ms.
17-03-18 03:11:29.994 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:11:29.994 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:11:30.044 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:30.044 -07 000000462 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:11:30.054 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:30.054 -07 000000424 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:30.054 -07 000000424 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:11:30.054 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.835 mm, average velocity = 2.099 mm/sec
17-03-18 03:11:30.924 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.996267,
17-03-18 03:11:31.004 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:31.004 -07 000000579 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:11:31.014 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:31.014 -07 000000424 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:31.034 -07 000000424 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:31.034 -07 000000424 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:31.034 -07 000000424 INF: Y Motor: Moved to 64.8789 after 1445 ms (table move)
17-03-18 03:11:31.044 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170405 mm (DAC = 37225)
17-03-18 03:11:31.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.044 -07 000000455 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:11:31.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:31.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.054 -07 000000561 INF: FPGA: Recv ZSGSRD 35817
17-03-18 03:11:31.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.064 -07 000000626 INF: FPGA: Recv ZSGSRD 35818
17-03-18 03:11:31.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.074 -07 000000569 INF: FPGA: Recv ZSGSRD 35824
17-03-18 03:11:31.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.084 -07 000000501 INF: FPGA: Recv ZSGSRD 35816
17-03-18 03:11:31.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.094 -07 000000618 INF: FPGA: Recv ZSGSRD 35817
17-03-18 03:11:31.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.104 -07 000000430 INF: FPGA: Recv ZSGSRD 35812
17-03-18 03:11:31.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.114 -07 000000626 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:11:31.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.124 -07 000000576 INF: FPGA: Recv ZSGSRD 35814
17-03-18 03:11:31.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.134 -07 000000444 INF: FPGA: Recv ZSGSRD 35819
17-03-18 03:11:31.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.144 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:31.144 -07 000000579 INF: FPGA: Recv ZPIEZORD 31655
17-03-18 03:11:31.154 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.154 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.680 V. Piezo Error = -9.2 V.
17-03-18 03:11:31.154 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35816 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35816 (-169.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35812 (-169.5 uncal um), Max = 35824 (-169.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:31.154 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35816, posNoise = 8, negNoise = 4
17-03-18 03:11:31.154 -07 000000610 INF: Z Motor: After move to -0.170405, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:31.154 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms
17-03-18 03:11:31.154 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:31.204 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-18 03:11:31.204 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:31.204 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.170412934080445. ----------
17-03-18 03:11:31.204 -07 000000610 INF: Cycle	109	Tile	7	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:31.204 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37048, sync = True, waitForSettling = True)
17-03-18 03:11:31.204 -07 000000610 INF: Z Motor: Moving to -0.169595 mm, started at -0.170413 mm, distance = 0.82 um
17-03-18 03:11:31.204 -07 000000610 INF: FPGA: Xmit ZDACW 37048\n [Z Motor]
17-03-18 03:11:31.204 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:11:31.214 -07 000000610 INF: FPGA: 'ZDACW 37048' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:31.214 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:31.214 -07 000000606 INF: FPGA: Recv ZDACR 37048
17-03-18 03:11:31.224 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.224 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:31.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.374 -07 000000561 INF: FPGA: Recv ZSGSRD 35690
17-03-18 03:11:31.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:31.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.384 -07 000000502 INF: FPGA: Recv ZSGSRD 35692
17-03-18 03:11:31.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.394 -07 000000512 INF: FPGA: Recv ZSGSRD 35694
17-03-18 03:11:31.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.404 -07 000000462 INF: FPGA: Recv ZSGSRD 35694
17-03-18 03:11:31.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:31.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.414 -07 000000501 INF: FPGA: Recv ZSGSRD 35691
17-03-18 03:11:31.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.424 -07 000000618 INF: FPGA: Recv ZSGSRD 35691
17-03-18 03:11:31.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.434 -07 000000424 INF: FPGA: Recv ZSGSRD 35691
17-03-18 03:11:31.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.444 -07 000000606 INF: FPGA: Recv ZSGSRD 35685
17-03-18 03:11:31.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.454 -07 000000576 INF: FPGA: Recv ZSGSRD 35683
17-03-18 03:11:31.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:31.464 -07 000000501 INF: FPGA: Recv ZSGSRD 35697
17-03-18 03:11:31.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:31.474 -07 000000512 INF: FPGA: Recv ZPIEZORD 31485
17-03-18 03:11:31.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:31.484 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.653 V. Piezo Error = -9.3 V.
17-03-18 03:11:31.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35691 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35691 (-168.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35683 (-168.7 uncal um), Max = 35697 (-168.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:11:31.484 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35691, posNoise = 6, negNoise = 8
17-03-18 03:11:31.484 -07 000000610 INF: Z Motor: After move to -0.169595, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:31.484 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:31.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:31.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:31.484 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:31.484 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:31.484 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:31.484 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:31.484 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:31.484 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:31.484 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:11:31.484 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:31.484 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:31.484 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:31.494 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:31.494 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:31.494 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:11:31.494 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:31.504 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:31.504 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:11:31.504 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:31.504 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:31.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37225 150\n [Camera]
17-03-18 03:11:31.554 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:31.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:31.704 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:32.114 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:32.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:32.114 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:32.114 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:32.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:32.114 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:32.114 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:32.114 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:11:32.114 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:32.114 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:11:32.304 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37225 787
17-03-18 03:11:32.454 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 938
17-03-18 03:11:32.494 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:11:32.494 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:11:32.494 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:32.494 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:11:32.494 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:11:32.494 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:32.494 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:32.494 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:11:32.494 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:32.504 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:11:32.644 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:32.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:32.644 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:32.644 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:32.644 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:11:32.654 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:32.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:32.654 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:32.654 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:32.654 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:11:32.834 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:32.844 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:32.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37225 150' command took 2 ms to send, 1320 ms to get response, and 1330 ms overall
17-03-18 03:11:32.844 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170038
17-03-18 03:11:32.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17004 mm
17-03-18 03:11:32.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:32.844 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:11:32.844 -07 000000626 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 03:11:32.844 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:32.844 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 37145, sync = True, waitForSettling = False)
17-03-18 03:11:32.854 -07 000000467 INF: Z Motor: Moving to -0.170039 mm, started at -0.169610 mm, distance = -0.43 um
17-03-18 03:11:32.854 -07 000000467 INF: FPGA: Xmit ZDACW 37145\n [Z Motor]
17-03-18 03:11:32.854 -07 000000606 INF: FPGA: Recv YRDPOS 132872
17-03-18 03:11:32.854 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 4 ms to get response, and 6 ms overall
17-03-18 03:11:32.854 -07 000000626 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:32.854 -07 000000626 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:32.854 -07 000000626 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:11:32.854 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:11:32.864 -07 000000467 INF: FPGA: 'ZDACW 37145' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:32.864 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:32.864 -07 000000444 INF: FPGA: Recv ZDACR 37145
17-03-18 03:11:32.874 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:32.874 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:32.874 -07 000000467 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:11:33.034 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:11:33.034 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:11:33.034 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:33.034 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:11:33.034 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:11:33.034 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:33.034 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:33.034 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:33.034 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:11:33.044 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:11:33.244 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:11:33.244 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-18 03:11:33.294 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:33.294 -07 000000455 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:11:33.304 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:33.304 -07 000000626 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:33.304 -07 000000626 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 03:11:33.304 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.844 mm, average velocity = 2.147 mm/sec
17-03-18 03:11:34.254 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:34.254 -07 000000430 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:11:34.264 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.264 -07 000000626 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:34.294 -07 000000626 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:34.294 -07 000000626 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:11:34.294 -07 000000626 INF: Y Motor: Moved to 65.7144 after 1443 ms (table move)
17-03-18 03:11:34.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170039 mm (DAC = 37145)
17-03-18 03:11:34.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.294 -07 000000501 INF: FPGA: Recv ZSGSRD 35765
17-03-18 03:11:34.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:34.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.304 -07 000000430 INF: FPGA: Recv ZSGSRD 35755
17-03-18 03:11:34.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.314 -07 000000618 INF: FPGA: Recv ZSGSRD 35764
17-03-18 03:11:34.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.324 -07 000000502 INF: FPGA: Recv ZSGSRD 35758
17-03-18 03:11:34.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.334 -07 000000424 INF: FPGA: Recv ZSGSRD 35762
17-03-18 03:11:34.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.344 -07 000000576 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:11:34.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.354 -07 000000591 INF: FPGA: Recv ZSGSRD 35758
17-03-18 03:11:34.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:34.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.364 -07 000000569 INF: FPGA: Recv ZSGSRD 35754
17-03-18 03:11:34.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.374 -07 000000606 INF: FPGA: Recv ZSGSRD 35760
17-03-18 03:11:34.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.384 -07 000000512 INF: FPGA: Recv ZSGSRD 35762
17-03-18 03:11:34.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:34.394 -07 000000561 INF: FPGA: Recv ZPIEZORD 31580
17-03-18 03:11:34.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.404 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.668 V. Piezo Error = -9.2 V.
17-03-18 03:11:34.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35760 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35760 (-169.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35754 (-169.1 uncal um), Max = 35765 (-169.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:34.404 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35760, posNoise = 5, negNoise = 6
17-03-18 03:11:34.404 -07 000000610 INF: Z Motor: After move to -0.170039, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:34.404 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 107 ms (allowed 150 ms), total time = 1550 ms
17-03-18 03:11:34.404 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:34.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:11:34.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:34.454 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.170053178200507. ----------
17-03-18 03:11:34.454 -07 000000610 INF: Cycle	109	Tile	8	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:34.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36968, sync = True, waitForSettling = True)
17-03-18 03:11:34.454 -07 000000610 INF: Z Motor: Moving to -0.169229 mm, started at -0.170053 mm, distance = 0.82 um
17-03-18 03:11:34.454 -07 000000610 INF: FPGA: Xmit ZDACW 36968\n [Z Motor]
17-03-18 03:11:34.454 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:11:34.464 -07 000000610 INF: FPGA: 'ZDACW 36968' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:34.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:34.464 -07 000000576 INF: FPGA: Recv ZDACR 36968
17-03-18 03:11:34.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:34.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.624 -07 000000579 INF: FPGA: Recv ZSGSRD 35639
17-03-18 03:11:34.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:34.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.634 -07 000000618 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:11:34.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.644 -07 000000606 INF: FPGA: Recv ZSGSRD 35632
17-03-18 03:11:34.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.654 -07 000000591 INF: FPGA: Recv ZSGSRD 35629
17-03-18 03:11:34.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.664 -07 000000626 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:11:34.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.674 -07 000000576 INF: FPGA: Recv ZSGSRD 35628
17-03-18 03:11:34.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.684 -07 000000512 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:11:34.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.694 -07 000000629 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:11:34.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.704 -07 000000444 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:11:34.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:34.714 -07 000000618 INF: FPGA: Recv ZSGSRD 35634
17-03-18 03:11:34.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:34.724 -07 000000576 INF: FPGA: Recv ZPIEZORD 31394
17-03-18 03:11:34.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:34.734 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.641 V. Piezo Error = -9.3 V.
17-03-18 03:11:34.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35633 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35634 (-168.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35628 (-168.3 uncal um), Max = 35639 (-168.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:11:34.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35633, posNoise = 6, negNoise = 5
17-03-18 03:11:34.734 -07 000000610 INF: Z Motor: After move to -0.169229, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:34.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:11:34.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:34.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:34.734 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:34.734 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:34.734 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:34.734 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:34.734 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:34.734 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:34.734 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:11:34.734 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:34.734 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:11:34.734 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:34.734 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:34.734 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:34.744 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:34.744 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:34.754 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:34.754 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:11:34.754 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:34.754 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:11:34.764 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37145 150\n [Camera]
17-03-18 03:11:34.954 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:35.364 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:35.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:35.364 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:35.364 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:35.364 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:11:35.364 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:35.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:35.364 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:35.364 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:35.364 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:11:35.554 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37145 789
17-03-18 03:11:35.704 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:35.744 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:11:35.744 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:11:35.744 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:35.744 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 03:11:35.744 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:35.744 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:11:35.754 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:11:35.754 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:35.754 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:35.764 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:11:35.894 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:35.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:35.894 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:35.894 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:35.894 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:11:35.904 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:35.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:35.904 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:35.904 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:35.904 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:11:36.084 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:11:36.084 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:36.094 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37145 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:11:36.094 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169714
17-03-18 03:11:36.094 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16971 mm
17-03-18 03:11:36.094 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:36.094 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:11:36.094 -07 000000501 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 03:11:36.094 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:36.094 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37074, sync = True, waitForSettling = False)
17-03-18 03:11:36.094 -07 000000618 INF: Z Motor: Moving to -0.169714 mm, started at -0.169237 mm, distance = -0.48 um
17-03-18 03:11:36.094 -07 000000590 INF: FPGA: Recv YRDPOS 134583
17-03-18 03:11:36.104 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:36.104 -07 000000501 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:36.104 -07 000000501 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:36.104 -07 000000501 INF: Y Motor: Moving 1341 steps-18
17-03-18 03:11:36.104 -07 000000618 INF: FPGA: Xmit ZDACW 37074\n [Z Motor]
17-03-18 03:11:36.104 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:11:36.114 -07 000000618 INF: FPGA: 'ZDACW 37074' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:11:36.114 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:36.124 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:36.124 -07 000000424 INF: FPGA: Recv ZDACR 37074
17-03-18 03:11:36.134 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:11:36.134 -07 000000618 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:11:36.284 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:11:36.284 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:11:36.284 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:36.284 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:11:36.284 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:11:36.284 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:36.284 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.030322,
17-03-18 03:11:36.284 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:36.284 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:11:36.284 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:36.294 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:11:36.484 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:11:36.484 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:11:36.534 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:36.534 -07 000000590 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:11:36.544 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:36.544 -07 000000501 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:36.544 -07 000000501 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:11:36.544 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.160 mm/sec
17-03-18 03:11:36.554 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:36.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:37.494 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:37.494 -07 000000591 INF: FPGA: Recv YRDPOS 136272
17-03-18 03:11:37.504 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:37.504 -07 000000501 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:37.534 -07 000000501 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:37.534 -07 000000501 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:37.534 -07 000000501 INF: Y Motor: Moved to 66.5391 after 1436 ms (table move)
17-03-18 03:11:37.534 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169714 mm (DAC = 37074)
17-03-18 03:11:37.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.534 -07 000000502 INF: FPGA: Recv ZSGSRD 35708
17-03-18 03:11:37.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:37.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.544 -07 000000569 INF: FPGA: Recv ZSGSRD 35708
17-03-18 03:11:37.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.554 -07 000000512 INF: FPGA: Recv ZSGSRD 35700
17-03-18 03:11:37.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.564 -07 000000444 INF: FPGA: Recv ZSGSRD 35714
17-03-18 03:11:37.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.574 -07 000000462 INF: FPGA: Recv ZSGSRD 35711
17-03-18 03:11:37.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.584 -07 000000455 INF: FPGA: Recv ZSGSRD 35709
17-03-18 03:11:37.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.594 -07 000000579 INF: FPGA: Recv ZSGSRD 35702
17-03-18 03:11:37.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.604 -07 000000576 INF: FPGA: Recv ZSGSRD 35708
17-03-18 03:11:37.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.614 -07 000000579 INF: FPGA: Recv ZSGSRD 35712
17-03-18 03:11:37.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.624 -07 000000591 INF: FPGA: Recv ZSGSRD 35707
17-03-18 03:11:37.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.634 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:37.634 -07 000000569 INF: FPGA: Recv ZPIEZORD 31510
17-03-18 03:11:37.644 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.644 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.657 V. Piezo Error = -9.3 V.
17-03-18 03:11:37.644 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35708 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35708 (-168.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35700 (-168.8 uncal um), Max = 35714 (-168.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:11:37.644 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35708, posNoise = 6, negNoise = 8
17-03-18 03:11:37.644 -07 000000610 INF: Z Motor: After move to -0.169714, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:37.644 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 106 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:11:37.644 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:37.694 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 03:11:37.694 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:37.694 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.169719119169135. ----------
17-03-18 03:11:37.694 -07 000000610 INF: Cycle	109	Tile	9	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:37.694 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36897, sync = True, waitForSettling = True)
17-03-18 03:11:37.694 -07 000000610 INF: Z Motor: Moving to -0.168904 mm, started at -0.169719 mm, distance = 0.82 um
17-03-18 03:11:37.694 -07 000000610 INF: FPGA: Xmit ZDACW 36897\n [Z Motor]
17-03-18 03:11:37.694 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:11:37.704 -07 000000610 INF: FPGA: 'ZDACW 36897' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:37.704 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:37.704 -07 000000512 INF: FPGA: Recv ZDACR 36897
17-03-18 03:11:37.714 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.714 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:37.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.864 -07 000000590 INF: FPGA: Recv ZSGSRD 35583
17-03-18 03:11:37.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:37.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.874 -07 000000591 INF: FPGA: Recv ZSGSRD 35583
17-03-18 03:11:37.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.884 -07 000000424 INF: FPGA: Recv ZSGSRD 35588
17-03-18 03:11:37.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.894 -07 000000579 INF: FPGA: Recv ZSGSRD 35583
17-03-18 03:11:37.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.904 -07 000000629 INF: FPGA: Recv ZSGSRD 35579
17-03-18 03:11:37.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.914 -07 000000590 INF: FPGA: Recv ZSGSRD 35585
17-03-18 03:11:37.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.924 -07 000000461 INF: FPGA: Recv ZSGSRD 35580
17-03-18 03:11:37.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.934 -07 000000502 INF: FPGA: Recv ZSGSRD 35582
17-03-18 03:11:37.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.944 -07 000000626 INF: FPGA: Recv ZSGSRD 35582
17-03-18 03:11:37.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:37.954 -07 000000606 INF: FPGA: Recv ZSGSRD 35581
17-03-18 03:11:37.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:37.964 -07 000000430 INF: FPGA: Recv ZPIEZORD 31322
17-03-18 03:11:37.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:37.974 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.630 V. Piezo Error = -9.4 V.
17-03-18 03:11:37.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35583 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35582 (-168.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35579 (-168.0 uncal um), Max = 35588 (-168.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:37.974 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35583, posNoise = 5, negNoise = 4
17-03-18 03:11:37.974 -07 000000610 INF: Z Motor: After move to -0.168904, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:37.974 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:37.974 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:37.974 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:37.974 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:37.974 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:37.974 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:37.974 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:37.974 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:37.974 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:37.974 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:11:37.974 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:37.974 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:11:37.974 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:37.984 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:37.984 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:37.984 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:37.984 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:37.994 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:37.994 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:37.994 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:37.994 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:11:37.994 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37074 150\n [Camera]
17-03-18 03:11:38.194 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:38.604 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:38.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:38.604 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:38.604 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:38.604 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:11:38.604 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:38.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:38.604 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:38.734 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:38.734 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:11:38.794 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37074 787
17-03-18 03:11:38.944 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:38.984 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:11:38.984 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:11:38.984 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:38.994 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:38.994 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:11:39.104 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:11:39.104 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:11:39.104 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:39.104 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:11:39.114 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms.
17-03-18 03:11:39.144 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1133
17-03-18 03:11:39.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1133
17-03-18 03:11:39.144 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:39.144 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1133
17-03-18 03:11:39.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1133
17-03-18 03:11:39.144 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:39.144 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:39.144 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:11:39.154 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:39.154 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:11:39.324 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:39.324 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:39.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37074 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:11:39.334 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:11:39.334 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 10 at Y-position 66.5390625, Z-Position -0.168916092651415. ------
17-03-18 03:11:39.334 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:39.334 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17575 mm
17-03-18 03:11:39.334 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:39.334 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:39.344 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:39.344 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:11:39.344 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:11:39.344 -07 000000591 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 03:11:39.344 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 38392, sync = True, waitForSettling = False)
17-03-18 03:11:39.344 -07 000000502 INF: Z Motor: Moving to -0.175747 mm, started at -0.168916 mm, distance = -6.83 um
17-03-18 03:11:39.354 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:39.354 -07 000000444 INF: FPGA: Recv YRDPOS 136273
17-03-18 03:11:39.364 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:11:39.364 -07 000000591 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:39.364 -07 000000502 INF: FPGA: Xmit ZDACW 38392\n [Z Motor]
17-03-18 03:11:39.364 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:11:39.364 -07 000000591 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:39.364 -07 000000591 INF: Y Motor: Moving 1349 steps-28
17-03-18 03:11:39.374 -07 000000502 INF: FPGA: 'ZDACW 38392' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:11:39.374 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:39.384 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:39.384 -07 000000629 INF: FPGA: Recv ZDACR 38392
17-03-18 03:11:39.394 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:11:39.394 -07 000000502 INF: Z Motor: MoveAbsStepped took 46 ms (did NOT wait for settling yet))
17-03-18 03:11:39.524 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:11:39.524 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:11:39.524 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:39.524 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:11:39.524 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:11:39.524 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:39.524 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:39.524 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:11:39.534 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:39.534 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:11:39.544 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:11:39.544 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:11:39.744 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:11:39.744 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:11:39.794 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:39.794 -07 000000502 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:11:39.804 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:39.804 -07 000000591 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:39.804 -07 000000591 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-18 03:11:39.804 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.844 mm, average velocity = 2.197 mm/sec
17-03-18 03:11:40.754 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:40.754 -07 000000430 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:11:40.764 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:40.764 -07 000000591 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:40.784 -07 000000591 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:40.784 -07 000000591 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:40.784 -07 000000591 INF: Y Motor: Moved to 67.3721 after 1446 ms (table move)
17-03-18 03:11:40.794 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175747 mm (DAC = 38392)
17-03-18 03:11:40.794 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.794 -07 000000569 INF: FPGA: Recv ZSGSRD 36655
17-03-18 03:11:40.804 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:40.804 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.804 -07 000000461 INF: FPGA: Recv ZSGSRD 36648
17-03-18 03:11:40.814 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.814 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.814 -07 000000606 INF: FPGA: Recv ZSGSRD 36647
17-03-18 03:11:40.824 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.824 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.824 -07 000000512 INF: FPGA: Recv ZSGSRD 36650
17-03-18 03:11:40.834 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.834 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.834 -07 000000444 INF: FPGA: Recv ZSGSRD 36652
17-03-18 03:11:40.844 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.844 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.844 -07 000000430 INF: FPGA: Recv ZSGSRD 36647
17-03-18 03:11:40.854 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.854 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.854 -07 000000461 INF: FPGA: Recv ZSGSRD 36641
17-03-18 03:11:40.864 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.864 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.864 -07 000000455 INF: FPGA: Recv ZSGSRD 36640
17-03-18 03:11:40.874 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.874 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.874 -07 000000576 INF: FPGA: Recv ZSGSRD 36648
17-03-18 03:11:40.884 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.884 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:40.884 -07 000000444 INF: FPGA: Recv ZSGSRD 36649
17-03-18 03:11:40.894 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.894 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:40.894 -07 000000626 INF: FPGA: Recv ZPIEZORD 32757
17-03-18 03:11:40.904 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:40.904 -07 000000618 INF: Z Motor: Piezo is near 50.0 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.858 V. Piezo Error = -8.6 V.
17-03-18 03:11:40.904 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.7 um, Read 10 ADC samples: Avg = 36648 (-174.9 uncal um), Error = 0.9 uncal um, Median = 36648 (-174.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36640 (-174.8 uncal um), Max = 36655 (-174.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:11:40.904 -07 000000618 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36648, posNoise = 7, negNoise = 8
17-03-18 03:11:40.904 -07 000000618 INF: Z Motor: After move to -0.175747, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:40.904 -07 000000618 INF: Z Motor: Settle wait time = 1450 ms, measure time = 107 ms (allowed 150 ms), total time = 1557 ms
17-03-18 03:11:40.904 -07 000000618 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:40.954 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-18 03:11:40.954 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:40.954 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:40.954 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:40.954 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:40.954 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:40.954 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:11:40.954 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:40.954 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:40.954 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:11:40.964 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:11:40.964 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:11:40.974 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:11:40.974 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:11:40.974 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:11:41.024 -07 000000591 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:11:41.324 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:11:41.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:11:41.324 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:11:41.324 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2317127784, 0x0, 559484976) start.
17-03-18 03:11:41.354 -07 000000512 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:11:41.364 -07 000000430 INF: FPGA: Recv CAMSNAP
17-03-18 03:11:41.364 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:11:41.444 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2317127784, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 03:11:41.444 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:41.444 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:11:41.444 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:11:41.464 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:41.464 -07 000000502 INF: Autofocus start
17-03-18 03:11:41.464 -07 000000502 INF: MeasureProfile start
17-03-18 03:11:41.464 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:41.474 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:41.474 -07 000000467 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:11:41.474 -07 000000502 INF: MeasureProfile done
17-03-18 03:11:41.474 -07 000000502 INF: X=16  Z correction [um]=0.01042744
17-03-18 03:11:41.474 -07 000000502 INF: Autofocus finished
17-03-18 03:11:41.554 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:41.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:41.644 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.026244,
17-03-18 03:11:41.674 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:11:41.674 -07 000000467 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 203 ms overall
17-03-18 03:11:41.674 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.17575787858239. ----------
17-03-18 03:11:41.684 -07 000000610 INF: Cycle	109	Tile	10	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:41.684 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36907, sync = True, waitForSettling = True)
17-03-18 03:11:41.684 -07 000000610 INF: Z Motor: Moving to -0.168949 mm, started at -0.175758 mm, distance = 6.81 um
17-03-18 03:11:41.684 -07 000000610 INF: FPGA: Xmit ZDACW 36907\n [Z Motor]
17-03-18 03:11:41.684 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:11:41.694 -07 000000610 INF: FPGA: 'ZDACW 36907' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:41.694 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:41.694 -07 000000455 INF: FPGA: Recv ZDACR 36907
17-03-18 03:11:41.704 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.704 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:41.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.854 -07 000000502 INF: FPGA: Recv ZSGSRD 35592
17-03-18 03:11:41.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:41.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.864 -07 000000626 INF: FPGA: Recv ZSGSRD 35591
17-03-18 03:11:41.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.874 -07 000000590 INF: FPGA: Recv ZSGSRD 35591
17-03-18 03:11:41.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.884 -07 000000462 INF: FPGA: Recv ZSGSRD 35591
17-03-18 03:11:41.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.894 -07 000000461 INF: FPGA: Recv ZSGSRD 35598
17-03-18 03:11:41.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.904 -07 000000430 INF: FPGA: Recv ZSGSRD 35595
17-03-18 03:11:41.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.914 -07 000000467 INF: FPGA: Recv ZSGSRD 35588
17-03-18 03:11:41.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.924 -07 000000591 INF: FPGA: Recv ZSGSRD 35589
17-03-18 03:11:41.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.934 -07 000000462 INF: FPGA: Recv ZSGSRD 35592
17-03-18 03:11:41.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:41.944 -07 000000569 INF: FPGA: Recv ZSGSRD 35589
17-03-18 03:11:41.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.954 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:41.954 -07 000000512 INF: FPGA: Recv ZPIEZORD 31347
17-03-18 03:11:41.964 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:41.964 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.632 V. Piezo Error = -9.4 V.
17-03-18 03:11:41.964 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35592 (-168.1 uncal um), Error = 0.8 uncal um, Median = 35591 (-168.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35588 (-168.1 uncal um), Max = 35598 (-168.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:41.964 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35592, posNoise = 6, negNoise = 4
17-03-18 03:11:41.964 -07 000000610 INF: Z Motor: After move to -0.168949, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:41.964 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:11:41.964 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:41.964 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:41.964 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:41.964 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:41.964 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:41.964 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:41.964 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:41.964 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:41.964 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:11:41.964 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:41.964 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:41.964 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:41.974 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:41.974 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:41.974 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:41.974 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:41.984 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 03:11:41.984 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:11:41.984 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 03:11:41.984 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:11:41.984 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 37083 150\n [Camera]
17-03-18 03:11:42.184 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:42.584 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:42.584 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:42.584 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:42.584 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:42.584 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:11:42.584 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:42.584 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:42.584 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:42.714 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:42.714 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:11:42.774 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37083 787
17-03-18 03:11:42.924 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:42.974 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:11:42.974 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:11:42.974 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:42.974 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:42.974 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:11:43.084 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:11:43.084 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:11:43.084 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:43.094 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:43.094 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms.
17-03-18 03:11:43.124 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:43.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:43.124 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:43.124 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:43.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:43.124 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:43.134 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:43.134 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:11:43.134 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:43.134 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:11:43.314 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:11:43.314 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:43.314 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 37083 150' command took 2 ms to send, 1324 ms to get response, and 1329 ms overall
17-03-18 03:11:43.314 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169249
17-03-18 03:11:43.314 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16925 mm
17-03-18 03:11:43.314 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:43.314 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:11:43.314 -07 000000618 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 03:11:43.314 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:43.314 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36973, sync = True, waitForSettling = False)
17-03-18 03:11:43.314 -07 000000606 INF: Z Motor: Moving to -0.169252 mm, started at -0.168974 mm, distance = -0.28 um
17-03-18 03:11:43.324 -07 000000606 INF: FPGA: Xmit ZDACW 36973\n [Z Motor]
17-03-18 03:11:43.324 -07 000000430 INF: FPGA: Recv YRDPOS 137978
17-03-18 03:11:43.324 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:11:43.324 -07 000000618 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:43.324 -07 000000618 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:43.324 -07 000000618 INF: Y Motor: Moving 1345 steps-22
17-03-18 03:11:43.324 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:11:43.334 -07 000000606 INF: FPGA: 'ZDACW 36973' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:43.334 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:43.344 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:43.344 -07 000000590 INF: FPGA: Recv ZDACR 36973
17-03-18 03:11:43.354 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:11:43.354 -07 000000606 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 03:11:43.504 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:11:43.504 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:11:43.504 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:43.504 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:11:43.504 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:11:43.504 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:43.504 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:43.514 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:43.514 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:11:43.514 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:11:43.704 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:11:43.704 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:11:43.754 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:43.754 -07 000000591 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:11:43.764 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:43.764 -07 000000618 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:43.764 -07 000000618 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 03:11:43.764 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.841 mm, average velocity = 2.178 mm/sec
17-03-18 03:11:44.714 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:44.714 -07 000000629 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:11:44.724 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.724 -07 000000618 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:44.744 -07 000000618 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:44.744 -07 000000618 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:44.744 -07 000000618 INF: Y Motor: Moved to 68.2051 after 1429 ms (table move)
17-03-18 03:11:44.754 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169252 mm (DAC = 36973)
17-03-18 03:11:44.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.754 -07 000000430 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:11:44.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:44.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.764 -07 000000444 INF: FPGA: Recv ZSGSRD 35649
17-03-18 03:11:44.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.774 -07 000000467 INF: FPGA: Recv ZSGSRD 35637
17-03-18 03:11:44.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.784 -07 000000461 INF: FPGA: Recv ZSGSRD 35640
17-03-18 03:11:44.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.794 -07 000000424 INF: FPGA: Recv ZSGSRD 35629
17-03-18 03:11:44.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.804 -07 000000455 INF: FPGA: Recv ZSGSRD 35635
17-03-18 03:11:44.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.814 -07 000000569 INF: FPGA: Recv ZSGSRD 35633
17-03-18 03:11:44.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.824 -07 000000591 INF: FPGA: Recv ZSGSRD 35632
17-03-18 03:11:44.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.834 -07 000000626 INF: FPGA: Recv ZSGSRD 35643
17-03-18 03:11:44.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:44.844 -07 000000629 INF: FPGA: Recv ZSGSRD 35638
17-03-18 03:11:44.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.854 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:44.854 -07 000000579 INF: FPGA: Recv ZPIEZORD 31453
17-03-18 03:11:44.864 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.864 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.642 V. Piezo Error = -9.2 V.
17-03-18 03:11:44.864 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35637 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35637 (-168.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 35629 (-168.3 uncal um), Max = 35649 (-168.5 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:11:44.864 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35637, posNoise = 12, negNoise = 8
17-03-18 03:11:44.864 -07 000000610 INF: Z Motor: After move to -0.169252, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:44.864 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 109 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:11:44.864 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:44.914 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 03:11:44.914 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:44.914 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.16926300010707. ----------
17-03-18 03:11:44.914 -07 000000610 INF: Cycle	109	Tile	11	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:44.914 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36796, sync = True, waitForSettling = True)
17-03-18 03:11:44.914 -07 000000610 INF: Z Motor: Moving to -0.168441 mm, started at -0.169263 mm, distance = 0.82 um
17-03-18 03:11:44.914 -07 000000610 INF: FPGA: Xmit ZDACW 36796\n [Z Motor]
17-03-18 03:11:44.914 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:11:44.924 -07 000000610 INF: FPGA: 'ZDACW 36796' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:44.924 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:44.924 -07 000000591 INF: FPGA: Recv ZDACR 36796
17-03-18 03:11:44.934 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:44.934 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:45.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.084 -07 000000561 INF: FPGA: Recv ZSGSRD 35513
17-03-18 03:11:45.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:45.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.094 -07 000000626 INF: FPGA: Recv ZSGSRD 35509
17-03-18 03:11:45.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.104 -07 000000629 INF: FPGA: Recv ZSGSRD 35505
17-03-18 03:11:45.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.114 -07 000000606 INF: FPGA: Recv ZSGSRD 35510
17-03-18 03:11:45.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.124 -07 000000591 INF: FPGA: Recv ZSGSRD 35515
17-03-18 03:11:45.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.134 -07 000000455 INF: FPGA: Recv ZSGSRD 35515
17-03-18 03:11:45.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.144 -07 000000576 INF: FPGA: Recv ZSGSRD 35508
17-03-18 03:11:45.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.154 -07 000000579 INF: FPGA: Recv ZSGSRD 35510
17-03-18 03:11:45.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.164 -07 000000461 INF: FPGA: Recv ZSGSRD 35516
17-03-18 03:11:45.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:45.174 -07 000000502 INF: FPGA: Recv ZSGSRD 35514
17-03-18 03:11:45.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.184 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:45.184 -07 000000512 INF: FPGA: Recv ZPIEZORD 31266
17-03-18 03:11:45.194 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:45.194 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.615 V. Piezo Error = -9.4 V.
17-03-18 03:11:45.194 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.4 um, Read 10 ADC samples: Avg = 35512 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35512 (-167.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35505 (-167.5 uncal um), Max = 35516 (-167.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:11:45.194 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35512, posNoise = 4, negNoise = 7
17-03-18 03:11:45.194 -07 000000610 INF: Z Motor: After move to -0.168441, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:45.194 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:45.194 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:45.194 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:45.194 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:45.194 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:45.194 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:45.194 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:45.194 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:45.194 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:45.194 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:11:45.194 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:45.194 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:11:45.194 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:45.204 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:45.204 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:45.204 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:11:45.204 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:45.214 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:45.214 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:11:45.214 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:45.214 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:11:45.224 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36973 150\n [Camera]
17-03-18 03:11:45.414 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:45.824 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:45.824 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:45.824 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:45.824 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:45.824 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:45.824 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:45.824 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:45.824 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2331803864, 0x0, 418435064) start.
17-03-18 03:11:45.824 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:45.824 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:11:46.014 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36973 787
17-03-18 03:11:46.164 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:46.214 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:11:46.214 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:11:46.214 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:46.214 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2331803864, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:11:46.214 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:11:46.214 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:46.214 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:46.214 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:11:46.214 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:46.224 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:11:46.364 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1132
17-03-18 03:11:46.364 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1132
17-03-18 03:11:46.364 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:46.364 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:46.364 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2367226128, 0x0, 391868352) start.
17-03-18 03:11:46.364 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1132
17-03-18 03:11:46.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1132
17-03-18 03:11:46.364 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:46.364 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:46.364 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:11:46.544 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:11:46.554 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:46.554 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36973 150' command took 2 ms to send, 1320 ms to get response, and 1329 ms overall
17-03-18 03:11:46.554 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169098
17-03-18 03:11:46.554 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16910 mm
17-03-18 03:11:46.554 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:46.554 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:46.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:46.554 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:11:46.554 -07 000000569 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-18 03:11:46.554 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:46.554 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 36939, sync = True, waitForSettling = False)
17-03-18 03:11:46.554 -07 000000424 INF: Z Motor: Moving to -0.169096 mm, started at -0.168460 mm, distance = -0.64 um
17-03-18 03:11:46.554 -07 000000512 INF: FPGA: Recv YRDPOS 139684
17-03-18 03:11:46.564 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:46.564 -07 000000569 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:46.564 -07 000000569 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:46.564 -07 000000569 INF: Y Motor: Moving 1340 steps-15
17-03-18 03:11:46.564 -07 000000424 INF: FPGA: Xmit ZDACW 36939\n [Z Motor]
17-03-18 03:11:46.564 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:11:46.574 -07 000000424 INF: FPGA: 'ZDACW 36939' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:11:46.574 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:46.574 -07 000000591 INF: FPGA: Recv ZDACR 36939
17-03-18 03:11:46.584 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:46.584 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:46.584 -07 000000424 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:11:46.794 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 429 ms.
17-03-18 03:11:46.794 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 429 ms.
17-03-18 03:11:46.794 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:46.794 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2367226128, 0x0, 391868352) end. Duration was 431 ms.
17-03-18 03:11:46.794 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 433 ms.
17-03-18 03:11:46.794 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:46.794 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:46.794 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:46.794 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 438 ms.
17-03-18 03:11:46.804 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 441 ms.
17-03-18 03:11:46.954 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 03:11:46.954 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:11:47.004 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:47.004 -07 000000461 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:11:47.014 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:47.014 -07 000000569 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:47.014 -07 000000569 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 03:11:47.014 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec
17-03-18 03:11:47.104 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.012614,
17-03-18 03:11:47.964 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:47.964 -07 000000606 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:11:47.974 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:47.974 -07 000000569 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:47.994 -07 000000569 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:47.994 -07 000000569 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:47.994 -07 000000569 INF: Y Motor: Moved to 69.0273 after 1443 ms (table move)
17-03-18 03:11:48.004 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169096 mm (DAC = 36939)
17-03-18 03:11:48.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.004 -07 000000444 INF: FPGA: Recv ZSGSRD 35609
17-03-18 03:11:48.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:11:48.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.014 -07 000000576 INF: FPGA: Recv ZSGSRD 35606
17-03-18 03:11:48.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.024 -07 000000606 INF: FPGA: Recv ZSGSRD 35620
17-03-18 03:11:48.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.034 -07 000000561 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:11:48.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.044 -07 000000590 INF: FPGA: Recv ZSGSRD 35611
17-03-18 03:11:48.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.054 -07 000000444 INF: FPGA: Recv ZSGSRD 35609
17-03-18 03:11:48.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.064 -07 000000618 INF: FPGA: Recv ZSGSRD 35607
17-03-18 03:11:48.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.074 -07 000000569 INF: FPGA: Recv ZSGSRD 35617
17-03-18 03:11:48.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.084 -07 000000462 INF: FPGA: Recv ZSGSRD 35608
17-03-18 03:11:48.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.094 -07 000000629 INF: FPGA: Recv ZSGSRD 35613
17-03-18 03:11:48.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.104 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:48.104 -07 000000501 INF: FPGA: Recv ZPIEZORD 31432
17-03-18 03:11:48.114 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.114 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.637 V. Piezo Error = -9.2 V.
17-03-18 03:11:48.114 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35612 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35610 (-168.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35606 (-168.2 uncal um), Max = 35620 (-168.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:48.114 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35612, posNoise = 8, negNoise = 6
17-03-18 03:11:48.114 -07 000000610 INF: Z Motor: After move to -0.169096, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:48.114 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 108 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:11:48.114 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:48.164 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:11:48.164 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:48.164 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.169102394803526. ----------
17-03-18 03:11:48.164 -07 000000610 INF: Cycle	109	Tile	12	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:48.164 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36763, sync = True, waitForSettling = True)
17-03-18 03:11:48.164 -07 000000610 INF: Z Motor: Moving to -0.168290 mm, started at -0.169102 mm, distance = 0.81 um
17-03-18 03:11:48.164 -07 000000610 INF: FPGA: Xmit ZDACW 36763\n [Z Motor]
17-03-18 03:11:48.164 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:11:48.174 -07 000000610 INF: FPGA: 'ZDACW 36763' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:48.174 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:48.174 -07 000000502 INF: FPGA: Recv ZDACR 36763
17-03-18 03:11:48.184 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.184 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:48.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.334 -07 000000430 INF: FPGA: Recv ZSGSRD 35492
17-03-18 03:11:48.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.344 -07 000000590 INF: FPGA: Recv ZSGSRD 35491
17-03-18 03:11:48.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.354 -07 000000467 INF: FPGA: Recv ZSGSRD 35495
17-03-18 03:11:48.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.364 -07 000000576 INF: FPGA: Recv ZSGSRD 35484
17-03-18 03:11:48.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.374 -07 000000444 INF: FPGA: Recv ZSGSRD 35482
17-03-18 03:11:48.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.384 -07 000000462 INF: FPGA: Recv ZSGSRD 35491
17-03-18 03:11:48.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.394 -07 000000455 INF: FPGA: Recv ZSGSRD 35485
17-03-18 03:11:48.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.404 -07 000000512 INF: FPGA: Recv ZSGSRD 35490
17-03-18 03:11:48.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.414 -07 000000618 INF: FPGA: Recv ZSGSRD 35491
17-03-18 03:11:48.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:48.424 -07 000000626 INF: FPGA: Recv ZSGSRD 35486
17-03-18 03:11:48.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.434 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:48.434 -07 000000629 INF: FPGA: Recv ZPIEZORD 31244
17-03-18 03:11:48.444 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:48.444 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.610 V. Piezo Error = -9.4 V.
17-03-18 03:11:48.444 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.3 um, Read 10 ADC samples: Avg = 35489 (-167.4 uncal um), Error = 0.8 uncal um, Median = 35490 (-167.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35482 (-167.4 uncal um), Max = 35495 (-167.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:11:48.444 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35489, posNoise = 6, negNoise = 7
17-03-18 03:11:48.444 -07 000000610 INF: Z Motor: After move to -0.168290, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:48.444 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:48.444 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:48.444 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:48.444 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:48.444 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:48.444 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:48.444 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:48.444 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:48.444 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:48.444 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:48.444 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:48.444 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:11:48.444 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:48.454 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:48.454 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:48.454 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:48.454 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:48.464 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:11:48.464 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:11:48.464 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:11:48.464 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:48.464 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36939 150\n [Camera]
17-03-18 03:11:48.664 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:49.074 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:49.074 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:49.074 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:49.074 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:49.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:49.074 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:49.074 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:49.074 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:11:49.084 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:49.084 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:11:49.264 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36939 787
17-03-18 03:11:49.414 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:49.454 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:11:49.454 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:11:49.454 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:49.454 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:11:49.454 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:11:49.454 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:49.464 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:11:49.464 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:11:49.464 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 03:11:49.474 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:11:49.604 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:49.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:49.604 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:49.604 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:49.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:49.614 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:49.614 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:11:49.614 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:49.614 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:49.614 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:11:49.794 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:49.794 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:49.794 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36939 150' command took 2 ms to send, 1318 ms to get response, and 1329 ms overall
17-03-18 03:11:49.804 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168626
17-03-18 03:11:49.804 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16863 mm
17-03-18 03:11:49.804 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:49.804 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:11:49.804 -07 000000444 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 03:11:49.804 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:49.804 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 36836, sync = True, waitForSettling = False)
17-03-18 03:11:49.804 -07 000000618 INF: Z Motor: Moving to -0.168624 mm, started at -0.168312 mm, distance = -0.31 um
17-03-18 03:11:49.804 -07 000000430 INF: FPGA: Recv YRDPOS 141368
17-03-18 03:11:49.814 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:11:49.814 -07 000000444 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:49.814 -07 000000618 INF: FPGA: Xmit ZDACW 36836\n [Z Motor]
17-03-18 03:11:49.814 -07 000000444 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:49.814 -07 000000444 INF: Y Motor: Moving 1352 steps-31
17-03-18 03:11:49.814 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:11:49.824 -07 000000618 INF: FPGA: 'ZDACW 36836' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:11:49.824 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:49.834 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:49.834 -07 000000569 INF: FPGA: Recv ZDACR 36836
17-03-18 03:11:49.844 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:11:49.844 -07 000000618 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 03:11:49.994 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:11:49.994 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:11:49.994 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:49.994 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:11:49.994 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:11:49.994 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:49.994 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:49.994 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:11:50.004 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:50.004 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:11:50.194 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 03:11:50.194 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:11:50.244 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:50.244 -07 000000461 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:11:50.254 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:50.254 -07 000000444 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:50.254 -07 000000444 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:11:50.254 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.845 mm, average velocity = 2.184 mm/sec
17-03-18 03:11:51.204 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:51.204 -07 000000569 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:11:51.214 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.214 -07 000000444 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:51.234 -07 000000444 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:51.234 -07 000000444 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:51.234 -07 000000444 INF: Y Motor: Moved to 69.8633 after 1435 ms (table move)
17-03-18 03:11:51.244 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168624 mm (DAC = 36836)
17-03-18 03:11:51.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.244 -07 000000579 INF: FPGA: Recv ZSGSRD 35535
17-03-18 03:11:51.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:51.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.254 -07 000000467 INF: FPGA: Recv ZSGSRD 35540
17-03-18 03:11:51.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.264 -07 000000618 INF: FPGA: Recv ZSGSRD 35540
17-03-18 03:11:51.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.274 -07 000000462 INF: FPGA: Recv ZSGSRD 35541
17-03-18 03:11:51.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.284 -07 000000590 INF: FPGA: Recv ZSGSRD 35541
17-03-18 03:11:51.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.294 -07 000000626 INF: FPGA: Recv ZSGSRD 35535
17-03-18 03:11:51.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.304 -07 000000606 INF: FPGA: Recv ZSGSRD 35538
17-03-18 03:11:51.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.314 -07 000000576 INF: FPGA: Recv ZSGSRD 35538
17-03-18 03:11:51.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.324 -07 000000579 INF: FPGA: Recv ZSGSRD 35539
17-03-18 03:11:51.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.334 -07 000000629 INF: FPGA: Recv ZSGSRD 35545
17-03-18 03:11:51.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.344 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:51.344 -07 000000501 INF: FPGA: Recv ZPIEZORD 31333
17-03-18 03:11:51.354 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.354 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.621 V. Piezo Error = -9.3 V.
17-03-18 03:11:51.354 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35539 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35540 (-167.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35535 (-167.7 uncal um), Max = 35545 (-167.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:51.354 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35539, posNoise = 6, negNoise = 4
17-03-18 03:11:51.354 -07 000000610 INF: Z Motor: After move to -0.168624, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:51.354 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 109 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:11:51.354 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:51.404 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 03:11:51.404 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:51.404 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.168633427317178. ----------
17-03-18 03:11:51.404 -07 000000610 INF: Cycle	109	Tile	13	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:51.404 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36660, sync = True, waitForSettling = True)
17-03-18 03:11:51.404 -07 000000610 INF: Z Motor: Moving to -0.167819 mm, started at -0.168633 mm, distance = 0.81 um
17-03-18 03:11:51.404 -07 000000610 INF: FPGA: Xmit ZDACW 36660\n [Z Motor]
17-03-18 03:11:51.404 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:11:51.414 -07 000000610 INF: FPGA: 'ZDACW 36660' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:51.414 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:51.414 -07 000000626 INF: FPGA: Recv ZDACR 36660
17-03-18 03:11:51.424 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.424 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:51.554 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:51.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.574 -07 000000561 INF: FPGA: Recv ZSGSRD 35407
17-03-18 03:11:51.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:51.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.584 -07 000000444 INF: FPGA: Recv ZSGSRD 35420
17-03-18 03:11:51.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.594 -07 000000606 INF: FPGA: Recv ZSGSRD 35411
17-03-18 03:11:51.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.604 -07 000000512 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:11:51.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.614 -07 000000501 INF: FPGA: Recv ZSGSRD 35418
17-03-18 03:11:51.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.624 -07 000000455 INF: FPGA: Recv ZSGSRD 35408
17-03-18 03:11:51.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.634 -07 000000502 INF: FPGA: Recv ZSGSRD 35418
17-03-18 03:11:51.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.644 -07 000000462 INF: FPGA: Recv ZSGSRD 35415
17-03-18 03:11:51.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.654 -07 000000424 INF: FPGA: Recv ZSGSRD 35410
17-03-18 03:11:51.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:51.664 -07 000000430 INF: FPGA: Recv ZSGSRD 35419
17-03-18 03:11:51.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.674 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:51.674 -07 000000467 INF: FPGA: Recv ZPIEZORD 31170
17-03-18 03:11:51.684 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:51.684 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.594 V. Piezo Error = -9.4 V.
17-03-18 03:11:51.684 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35414 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35414 (-167.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35407 (-166.9 uncal um), Max = 35420 (-167.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:11:51.684 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35414, posNoise = 6, negNoise = 7
17-03-18 03:11:51.684 -07 000000610 INF: Z Motor: After move to -0.167819, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:51.684 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:51.684 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:51.684 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:51.684 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:51.684 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:51.684 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:51.684 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:51.684 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:51.684 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:51.684 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:51.684 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:51.684 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:51.684 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:51.694 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:51.694 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:51.694 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:51.694 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:51.704 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:11:51.704 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:51.704 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:11:51.704 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:11:51.714 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36836 150\n [Camera]
17-03-18 03:11:51.914 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:52.314 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:52.314 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:52.314 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:52.314 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:52.314 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:52.314 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:52.314 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:52.324 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:11:52.324 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:52.324 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:11:52.464 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.989471,
17-03-18 03:11:52.504 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36836 787
17-03-18 03:11:52.654 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:52.694 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:11:52.694 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:11:52.694 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:52.694 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 367 ms.
17-03-18 03:11:52.694 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 03:11:52.694 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:52.694 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:52.694 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:11:52.694 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:11:52.704 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:11:52.844 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:52.844 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:52.844 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:52.844 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:52.844 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:11:52.854 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:52.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:52.854 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:52.854 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:52.854 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:11:53.044 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1326
17-03-18 03:11:53.044 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:53.044 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36836 150' command took 2 ms to send, 1323 ms to get response, and 1333 ms overall
17-03-18 03:11:53.044 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:11:53.044 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.86328125, Z-Position -0.167830400799457. ------
17-03-18 03:11:53.044 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:53.044 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.17376 mm
17-03-18 03:11:53.044 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:53.054 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:53.054 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:11:53.054 -07 000000501 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 03:11:53.054 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:53.054 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37958, sync = True, waitForSettling = False)
17-03-18 03:11:53.054 -07 000000502 INF: Z Motor: Moving to -0.173761 mm, started at -0.167830 mm, distance = -5.93 um
17-03-18 03:11:53.054 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:11:53.054 -07 000000512 INF: FPGA: Recv YRDPOS 143080
17-03-18 03:11:53.064 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:11:53.064 -07 000000501 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:53.064 -07 000000501 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:53.064 -07 000000501 INF: Y Motor: Moving 1343 steps-19
17-03-18 03:11:53.064 -07 000000502 INF: FPGA: Xmit ZDACW 37958\n [Z Motor]
17-03-18 03:11:53.064 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:11:53.074 -07 000000502 INF: FPGA: 'ZDACW 37958' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:11:53.194 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:11:53.204 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:53.214 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:53.214 -07 000000626 INF: FPGA: Recv ZDACR 37958
17-03-18 03:11:53.224 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:11:53.224 -07 000000502 INF: Z Motor: MoveAbsStepped took 167 ms (did NOT wait for settling yet))
17-03-18 03:11:53.244 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 03:11:53.244 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:11:53.244 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:53.244 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 03:11:53.244 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:11:53.244 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:53.244 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:53.244 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:53.244 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:11:53.254 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:11:53.394 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:11:53.394 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 124 ms to send, 197 ms to get response, and 343 ms overall
17-03-18 03:11:53.574 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:11:53.574 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 517 ms overall
17-03-18 03:11:53.624 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:53.634 -07 000000462 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:11:53.634 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:11:53.634 -07 000000501 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:53.634 -07 000000501 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:11:53.634 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 518 ms, distance = 0.839 mm, average velocity = 1.620 mm/sec
17-03-18 03:11:54.584 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:54.584 -07 000000629 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:11:54.594 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:54.594 -07 000000501 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:54.614 -07 000000501 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:54.614 -07 000000501 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:11:54.614 -07 000000501 INF: Y Motor: Moved to 70.6885 after 1566 ms (table move)
17-03-18 03:11:54.624 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173761 mm (DAC = 37958)
17-03-18 03:11:54.624 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.624 -07 000000576 INF: FPGA: Recv ZSGSRD 36335
17-03-18 03:11:54.634 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:54.634 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.634 -07 000000629 INF: FPGA: Recv ZSGSRD 36339
17-03-18 03:11:54.644 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.644 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.644 -07 000000455 INF: FPGA: Recv ZSGSRD 36337
17-03-18 03:11:54.654 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.654 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.654 -07 000000606 INF: FPGA: Recv ZSGSRD 36334
17-03-18 03:11:54.664 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.664 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.664 -07 000000467 INF: FPGA: Recv ZSGSRD 36344
17-03-18 03:11:54.674 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.674 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.674 -07 000000512 INF: FPGA: Recv ZSGSRD 36335
17-03-18 03:11:54.684 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.684 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.684 -07 000000444 INF: FPGA: Recv ZSGSRD 36332
17-03-18 03:11:54.694 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.694 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.694 -07 000000579 INF: FPGA: Recv ZSGSRD 36339
17-03-18 03:11:54.704 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.704 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.704 -07 000000606 INF: FPGA: Recv ZSGSRD 36337
17-03-18 03:11:54.714 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.714 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:54.714 -07 000000569 INF: FPGA: Recv ZSGSRD 36343
17-03-18 03:11:54.724 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.724 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:54.724 -07 000000461 INF: FPGA: Recv ZPIEZORD 32388
17-03-18 03:11:54.734 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:54.734 -07 000000561 INF: Z Motor: Piezo is near 49.2 V (nominally 0 to 100 V), expect near 57.9 V, since DAC is at 5.792 V. Piezo Error = -8.7 V.
17-03-18 03:11:54.734 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.8 um, Read 10 ADC samples: Avg = 36338 (-172.9 uncal um), Error = 0.9 uncal um, Median = 36337 (-172.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36332 (-172.8 uncal um), Max = 36344 (-172.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:54.734 -07 000000561 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36338, posNoise = 6, negNoise = 6
17-03-18 03:11:54.734 -07 000000561 INF: Z Motor: After move to -0.173761, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:54.734 -07 000000561 INF: Z Motor: Settle wait time = 1569 ms, measure time = 109 ms (allowed 150 ms), total time = 1678 ms
17-03-18 03:11:54.734 -07 000000561 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:54.784 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1731 ms
17-03-18 03:11:54.784 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:54.784 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:54.784 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:54.784 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:54.784 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:54.784 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:11:54.784 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:54.794 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:54.794 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:11:54.794 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:11:54.794 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:11:54.804 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:11:54.804 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:11:54.804 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:11:54.854 -07 000000606 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:11:55.154 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:11:55.154 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:11:55.154 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:11:55.154 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 03:11:55.194 -07 000000569 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:11:55.194 -07 000000501 INF: FPGA: Recv CAMSNAP
17-03-18 03:11:55.194 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 03:11:55.284 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:11:55.284 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:55.284 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:11:55.284 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:11:55.294 -07 000000467 INF: Autofocus start
17-03-18 03:11:55.294 -07 000000467 INF: MeasureProfile start
17-03-18 03:11:55.294 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:11:55.294 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:11:55.304 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:11:55.304 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:11:55.304 -07 000000467 INF: MeasureProfile done
17-03-18 03:11:55.304 -07 000000467 INF: X=32  Z correction [um]=0.09220707
17-03-18 03:11:55.304 -07 000000467 INF: Autofocus finished
17-03-18 03:11:55.504 -07 000000569 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:11:55.504 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:11:55.504 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.173766372818445. ----------
17-03-18 03:11:55.504 -07 000000610 INF: Cycle	109	Tile	14	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:55.514 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36491, sync = True, waitForSettling = True)
17-03-18 03:11:55.514 -07 000000610 INF: Z Motor: Moving to -0.167045 mm, started at -0.173766 mm, distance = 6.72 um
17-03-18 03:11:55.514 -07 000000610 INF: FPGA: Xmit ZDACW 36491\n [Z Motor]
17-03-18 03:11:55.514 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:11:55.524 -07 000000610 INF: FPGA: 'ZDACW 36491' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.524 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:55.524 -07 000000576 INF: FPGA: Recv ZDACR 36491
17-03-18 03:11:55.534 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.534 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:55.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.684 -07 000000444 INF: FPGA: Recv ZSGSRD 35292
17-03-18 03:11:55.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:55.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.694 -07 000000461 INF: FPGA: Recv ZSGSRD 35296
17-03-18 03:11:55.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.704 -07 000000618 INF: FPGA: Recv ZSGSRD 35288
17-03-18 03:11:55.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.714 -07 000000462 INF: FPGA: Recv ZSGSRD 35294
17-03-18 03:11:55.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.724 -07 000000579 INF: FPGA: Recv ZSGSRD 35288
17-03-18 03:11:55.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.734 -07 000000606 INF: FPGA: Recv ZSGSRD 35298
17-03-18 03:11:55.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.744 -07 000000467 INF: FPGA: Recv ZSGSRD 35298
17-03-18 03:11:55.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.754 -07 000000501 INF: FPGA: Recv ZSGSRD 35293
17-03-18 03:11:55.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.764 -07 000000618 INF: FPGA: Recv ZSGSRD 35293
17-03-18 03:11:55.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:55.774 -07 000000590 INF: FPGA: Recv ZSGSRD 35291
17-03-18 03:11:55.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:55.784 -07 000000576 INF: FPGA: Recv ZPIEZORD 30991
17-03-18 03:11:55.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:55.794 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.5 V.
17-03-18 03:11:55.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35293 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35293 (-166.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35288 (-166.2 uncal um), Max = 35298 (-166.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:11:55.794 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35293, posNoise = 5, negNoise = 5
17-03-18 03:11:55.794 -07 000000610 INF: Z Motor: After move to -0.167045, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:55.794 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:11:55.794 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:55.794 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:55.794 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:55.794 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:55.794 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:55.794 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:55.794 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:55.794 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:55.794 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:55.794 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:55.794 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:55.794 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:55.794 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:55.794 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:11:55.794 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:55.804 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:55.814 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:11:55.814 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:55.814 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:11:55.814 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:11:55.824 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36667 150\n [Camera]
17-03-18 03:11:56.014 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:56.424 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:56.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:56.424 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:56.424 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:56.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:56.424 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:56.424 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:56.424 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 594000200, 0x0, 391868352) start.
17-03-18 03:11:56.434 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:56.434 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:11:56.554 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:11:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:11:56.614 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36667 787
17-03-18 03:11:56.764 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:11:56.804 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 594000200, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:11:56.804 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:11:56.804 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:56.804 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:11:56.804 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:11:56.804 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:56.804 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:56.804 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:11:56.804 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:56.814 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:11:56.954 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:11:56.964 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:11:56.964 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:56.964 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:11:56.964 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:11:56.964 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:56.964 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:56.964 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:11:56.974 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:56.974 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:11:57.144 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:11:57.144 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:11:57.144 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36667 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:11:57.154 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167773
17-03-18 03:11:57.154 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16777 mm
17-03-18 03:11:57.154 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:11:57.154 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:11:57.154 -07 000000590 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 03:11:57.154 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:57.154 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36650, sync = True, waitForSettling = False)
17-03-18 03:11:57.154 -07 000000606 INF: Z Motor: Moving to -0.167773 mm, started at -0.167053 mm, distance = -0.72 um
17-03-18 03:11:57.164 -07 000000606 INF: FPGA: Xmit ZDACW 36650\n [Z Motor]
17-03-18 03:11:57.164 -07 000000462 INF: FPGA: Recv YRDPOS 144770
17-03-18 03:11:57.164 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 4 ms overall
17-03-18 03:11:57.164 -07 000000590 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:57.164 -07 000000590 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:11:57.164 -07 000000590 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:11:57.164 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:11:57.174 -07 000000606 INF: FPGA: 'ZDACW 36650' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:11:57.174 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:57.174 -07 000000424 INF: FPGA: Recv ZDACR 36650
17-03-18 03:11:57.184 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:57.184 -07 000000606 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 03:11:57.184 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:11:57.344 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:11:57.344 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:11:57.344 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:57.354 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:11:57.354 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:11:57.354 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:11:57.354 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:11:57.354 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:11:57.354 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 03:11:57.354 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:11:57.564 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:11:57.564 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 400 ms overall
17-03-18 03:11:57.604 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:57.614 -07 000000467 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:11:57.614 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:11:57.614 -07 000000590 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:57.614 -07 000000590 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:11:57.614 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.844 mm, average velocity = 2.110 mm/sec
17-03-18 03:11:57.824 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.015368,
17-03-18 03:11:58.564 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:11:58.564 -07 000000569 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:11:58.574 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:58.574 -07 000000590 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:11:58.594 -07 000000590 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:11:58.594 -07 000000590 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:11:58.594 -07 000000590 INF: Y Motor: Moved to 71.5190 after 1442 ms (table move)
17-03-18 03:11:58.604 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167773 mm (DAC = 36650)
17-03-18 03:11:58.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.604 -07 000000591 INF: FPGA: Recv ZSGSRD 35402
17-03-18 03:11:58.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:58.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.614 -07 000000626 INF: FPGA: Recv ZSGSRD 35404
17-03-18 03:11:58.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.624 -07 000000579 INF: FPGA: Recv ZSGSRD 35414
17-03-18 03:11:58.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.634 -07 000000424 INF: FPGA: Recv ZSGSRD 35402
17-03-18 03:11:58.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.644 -07 000000590 INF: FPGA: Recv ZSGSRD 35412
17-03-18 03:11:58.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.654 -07 000000512 INF: FPGA: Recv ZSGSRD 35407
17-03-18 03:11:58.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.664 -07 000000569 INF: FPGA: Recv ZSGSRD 35413
17-03-18 03:11:58.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:11:58.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.674 -07 000000626 INF: FPGA: Recv ZSGSRD 35409
17-03-18 03:11:58.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.684 -07 000000455 INF: FPGA: Recv ZSGSRD 35406
17-03-18 03:11:58.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.694 -07 000000502 INF: FPGA: Recv ZSGSRD 35409
17-03-18 03:11:58.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.704 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:58.704 -07 000000430 INF: FPGA: Recv ZPIEZORD 31152
17-03-18 03:11:58.714 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.714 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.592 V. Piezo Error = -9.4 V.
17-03-18 03:11:58.714 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35408 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35408 (-166.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35402 (-166.9 uncal um), Max = 35414 (-167.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:11:58.714 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35408, posNoise = 6, negNoise = 6
17-03-18 03:11:58.714 -07 000000610 INF: Z Motor: After move to -0.167773, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:58.714 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 109 ms (allowed 150 ms), total time = 1553 ms
17-03-18 03:11:58.714 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:11:58.764 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:11:58.764 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:11:58.764 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.167791855526607. ----------
17-03-18 03:11:58.764 -07 000000610 INF: Cycle	109	Tile	15	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:11:58.764 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36473, sync = True, waitForSettling = True)
17-03-18 03:11:58.764 -07 000000610 INF: Z Motor: Moving to -0.166963 mm, started at -0.167792 mm, distance = 0.83 um
17-03-18 03:11:58.764 -07 000000610 INF: FPGA: Xmit ZDACW 36473\n [Z Motor]
17-03-18 03:11:58.764 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 03:11:58.774 -07 000000610 INF: FPGA: 'ZDACW 36473' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:11:58.774 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:11:58.774 -07 000000462 INF: FPGA: Recv ZDACR 36473
17-03-18 03:11:58.784 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.784 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:11:58.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.934 -07 000000569 INF: FPGA: Recv ZSGSRD 35281
17-03-18 03:11:58.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:11:58.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.944 -07 000000590 INF: FPGA: Recv ZSGSRD 35282
17-03-18 03:11:58.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.954 -07 000000629 INF: FPGA: Recv ZSGSRD 35279
17-03-18 03:11:58.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.964 -07 000000502 INF: FPGA: Recv ZSGSRD 35283
17-03-18 03:11:58.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.974 -07 000000579 INF: FPGA: Recv ZSGSRD 35282
17-03-18 03:11:58.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.984 -07 000000606 INF: FPGA: Recv ZSGSRD 35280
17-03-18 03:11:58.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:58.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:58.994 -07 000000626 INF: FPGA: Recv ZSGSRD 35281
17-03-18 03:11:59.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:59.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:59.004 -07 000000512 INF: FPGA: Recv ZSGSRD 35278
17-03-18 03:11:59.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:59.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:59.014 -07 000000461 INF: FPGA: Recv ZSGSRD 35277
17-03-18 03:11:59.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:59.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:11:59.024 -07 000000467 INF: FPGA: Recv ZSGSRD 35284
17-03-18 03:11:59.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:59.034 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:11:59.034 -07 000000462 INF: FPGA: Recv ZPIEZORD 30995
17-03-18 03:11:59.044 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:11:59.044 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.565 V. Piezo Error = -9.4 V.
17-03-18 03:11:59.044 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35281 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35281 (-166.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35277 (-166.1 uncal um), Max = 35284 (-166.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:11:59.044 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35281, posNoise = 3, negNoise = 4
17-03-18 03:11:59.044 -07 000000610 INF: Z Motor: After move to -0.166963, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:11:59.044 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:11:59.044 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:11:59.044 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:11:59.044 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:11:59.044 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:11:59.044 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:11:59.044 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:11:59.044 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:11:59.044 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:11:59.044 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:11:59.044 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:11:59.044 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:11:59.044 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:11:59.054 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:11:59.054 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:11:59.054 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:11:59.054 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:11:59.064 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:11:59.064 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:11:59.064 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:11:59.064 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:11:59.064 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36650 150\n [Camera]
17-03-18 03:11:59.264 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:11:59.664 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:11:59.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:11:59.664 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:11:59.664 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:11:59.664 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:11:59.664 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:11:59.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:11:59.664 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:11:59.794 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:11:59.794 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:11:59.864 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36650 787
17-03-18 03:12:00.004 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:00.044 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:12:00.044 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:12:00.044 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:00.044 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:00.054 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:12:00.164 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:12:00.164 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:12:00.164 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:00.174 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:00.174 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 03:12:00.204 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:00.204 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:00.204 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:00.204 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:00.204 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:00.204 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:00.204 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:00.204 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:12:00.214 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:00.214 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:12:00.394 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:00.394 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:00.394 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36650 150' command took 2 ms to send, 1323 ms to get response, and 1329 ms overall
17-03-18 03:12:00.394 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167372
17-03-18 03:12:00.394 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16737 mm
17-03-18 03:12:00.394 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:00.394 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:12:00.394 -07 000000512 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 03:12:00.394 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:00.394 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36562, sync = True, waitForSettling = False)
17-03-18 03:12:00.394 -07 000000606 INF: Z Motor: Moving to -0.167370 mm, started at -0.166976 mm, distance = -0.39 um
17-03-18 03:12:00.404 -07 000000606 INF: FPGA: Xmit ZDACW 36562\n [Z Motor]
17-03-18 03:12:00.404 -07 000000618 INF: FPGA: Recv YRDPOS 146471
17-03-18 03:12:00.404 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:12:00.404 -07 000000512 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:00.404 -07 000000512 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:00.404 -07 000000512 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:12:00.404 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:12:00.414 -07 000000606 INF: FPGA: 'ZDACW 36562' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:00.414 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:00.414 -07 000000579 INF: FPGA: Recv ZDACR 36562
17-03-18 03:12:00.424 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:00.424 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:00.424 -07 000000606 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 03:12:00.584 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:12:00.584 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:12:00.584 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:00.584 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 03:12:00.584 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:12:00.584 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:00.584 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:00.594 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:00.594 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:12:00.594 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:12:00.794 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 03:12:00.794 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 03:12:00.844 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:00.844 -07 000000430 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:12:00.854 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:00.854 -07 000000512 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:00.854 -07 000000512 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 03:12:00.854 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.844 mm, average velocity = 2.130 mm/sec
17-03-18 03:12:01.554 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:01.804 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:01.804 -07 000000590 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:12:01.814 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:01.814 -07 000000512 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:01.834 -07 000000512 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:01.834 -07 000000512 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:01.834 -07 000000512 INF: Y Motor: Moved to 72.3496 after 1440 ms (table move)
17-03-18 03:12:01.844 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167370 mm (DAC = 36562)
17-03-18 03:12:01.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.844 -07 000000501 INF: FPGA: Recv ZSGSRD 35343
17-03-18 03:12:01.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:01.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.854 -07 000000629 INF: FPGA: Recv ZSGSRD 35342
17-03-18 03:12:01.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.864 -07 000000576 INF: FPGA: Recv ZSGSRD 35342
17-03-18 03:12:01.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.874 -07 000000590 INF: FPGA: Recv ZSGSRD 35345
17-03-18 03:12:01.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.884 -07 000000561 INF: FPGA: Recv ZSGSRD 35345
17-03-18 03:12:01.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.894 -07 000000501 INF: FPGA: Recv ZSGSRD 35346
17-03-18 03:12:01.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.904 -07 000000606 INF: FPGA: Recv ZSGSRD 35340
17-03-18 03:12:01.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.914 -07 000000576 INF: FPGA: Recv ZSGSRD 35344
17-03-18 03:12:01.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.924 -07 000000424 INF: FPGA: Recv ZSGSRD 35346
17-03-18 03:12:01.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:01.934 -07 000000561 INF: FPGA: Recv ZSGSRD 35340
17-03-18 03:12:01.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.944 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:01.944 -07 000000502 INF: FPGA: Recv ZPIEZORD 31068
17-03-18 03:12:01.954 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:01.954 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.579 V. Piezo Error = -9.4 V.
17-03-18 03:12:01.954 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.4 um, Read 10 ADC samples: Avg = 35343 (-166.5 uncal um), Error = 0.9 uncal um, Median = 35344 (-166.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35340 (-166.5 uncal um), Max = 35346 (-166.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:12:01.954 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35343, posNoise = 3, negNoise = 3
17-03-18 03:12:01.954 -07 000000610 INF: Z Motor: After move to -0.167370, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:01.954 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 109 ms (allowed 150 ms), total time = 1551 ms
17-03-18 03:12:01.954 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:02.004 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:12:02.004 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:02.004 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.167374281737392. ----------
17-03-18 03:12:02.004 -07 000000610 INF: Cycle	109	Tile	16	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:02.004 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36386, sync = True, waitForSettling = True)
17-03-18 03:12:02.004 -07 000000610 INF: Z Motor: Moving to -0.166564 mm, started at -0.167374 mm, distance = 0.81 um
17-03-18 03:12:02.004 -07 000000610 INF: FPGA: Xmit ZDACW 36386\n [Z Motor]
17-03-18 03:12:02.004 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:12:02.014 -07 000000610 INF: FPGA: 'ZDACW 36386' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:12:02.014 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:02.014 -07 000000467 INF: FPGA: Recv ZDACR 36386
17-03-18 03:12:02.024 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.024 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:02.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.174 -07 000000461 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:12:02.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:02.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.184 -07 000000444 INF: FPGA: Recv ZSGSRD 35219
17-03-18 03:12:02.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.194 -07 000000512 INF: FPGA: Recv ZSGSRD 35223
17-03-18 03:12:02.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.204 -07 000000502 INF: FPGA: Recv ZSGSRD 35222
17-03-18 03:12:02.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.214 -07 000000606 INF: FPGA: Recv ZSGSRD 35221
17-03-18 03:12:02.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.224 -07 000000576 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:12:02.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.234 -07 000000579 INF: FPGA: Recv ZSGSRD 35213
17-03-18 03:12:02.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.244 -07 000000569 INF: FPGA: Recv ZSGSRD 35220
17-03-18 03:12:02.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.254 -07 000000501 INF: FPGA: Recv ZSGSRD 35224
17-03-18 03:12:02.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:02.264 -07 000000629 INF: FPGA: Recv ZSGSRD 35217
17-03-18 03:12:02.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.274 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:02.274 -07 000000576 INF: FPGA: Recv ZPIEZORD 30896
17-03-18 03:12:02.284 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:02.284 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.552 V. Piezo Error = -9.5 V.
17-03-18 03:12:02.284 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35220 (-165.7 uncal um), Error = 0.8 uncal um, Median = 35220 (-165.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35213 (-165.7 uncal um), Max = 35224 (-165.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:12:02.284 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35220, posNoise = 4, negNoise = 7
17-03-18 03:12:02.284 -07 000000610 INF: Z Motor: After move to -0.166564, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:02.284 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:12:02.284 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:02.284 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:02.284 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:02.284 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:02.284 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:02.284 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:02.284 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:02.284 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:02.284 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:02.284 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:02.284 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:12:02.284 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:02.294 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:02.294 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:02.294 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:12:02.294 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:02.304 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:12:02.304 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 03:12:02.304 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:02.304 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:02.314 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36562 150\n [Camera]
17-03-18 03:12:02.514 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:02.914 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:02.914 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:02.914 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:02.914 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:02.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:02.914 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:02.914 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:02.914 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:12:02.924 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:02.924 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:12:03.104 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36562 787
17-03-18 03:12:03.184 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.024884,
17-03-18 03:12:03.254 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:03.304 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:12:03.304 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:12:03.304 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:03.304 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:12:03.304 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:12:03.304 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:03.304 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:03.304 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:12:03.304 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:03.314 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:12:03.444 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:03.444 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:03.454 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:03.454 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:03.454 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) start.
17-03-18 03:12:03.454 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:03.454 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:03.454 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:03.574 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:03.574 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:12:03.644 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:03.644 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:03.644 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36562 150' command took 2 ms to send, 1321 ms to get response, and 1329 ms overall
17-03-18 03:12:03.644 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167071
17-03-18 03:12:03.644 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16707 mm
17-03-18 03:12:03.644 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:03.644 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:12:03.644 -07 000000502 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 03:12:03.644 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 36497, sync = True, waitForSettling = False)
17-03-18 03:12:03.644 -07 000000512 INF: Z Motor: Moving to -0.167073 mm, started at -0.166584 mm, distance = -0.49 um
17-03-18 03:12:03.644 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:03.644 -07 000000461 INF: FPGA: Recv YRDPOS 148172
17-03-18 03:12:03.654 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:03.654 -07 000000502 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:03.654 -07 000000502 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:03.654 -07 000000502 INF: Y Motor: Moving 1349 steps-27
17-03-18 03:12:03.654 -07 000000512 INF: FPGA: Xmit ZDACW 36497\n [Z Motor]
17-03-18 03:12:03.654 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 03:12:03.664 -07 000000512 INF: FPGA: 'ZDACW 36497' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:12:03.664 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:03.664 -07 000000618 INF: FPGA: Recv ZDACR 36497
17-03-18 03:12:03.674 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:03.674 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:03.674 -07 000000512 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:12:03.834 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1441468064, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:12:03.834 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:12:03.834 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:03.834 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:03.834 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:12:03.944 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:12:03.944 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 03:12:03.944 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:03.944 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:03.954 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 502 ms.
17-03-18 03:12:04.044 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 03:12:04.044 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:12:04.094 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:04.094 -07 000000591 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:12:04.104 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:04.104 -07 000000502 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:04.104 -07 000000502 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm)
17-03-18 03:12:04.104 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.118 mm/sec
17-03-18 03:12:05.054 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:05.054 -07 000000424 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:12:05.064 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:05.064 -07 000000502 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:05.084 -07 000000502 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:05.084 -07 000000502 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:12:05.084 -07 000000502 INF: Y Motor: Moved to 73.1763 after 1443 ms (table move)
17-03-18 03:12:05.094 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167073 mm (DAC = 36497)
17-03-18 03:12:05.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.094 -07 000000576 INF: FPGA: Recv ZSGSRD 35297
17-03-18 03:12:05.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:05.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.104 -07 000000626 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:12:05.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.114 -07 000000461 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:12:05.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.124 -07 000000590 INF: FPGA: Recv ZSGSRD 35302
17-03-18 03:12:05.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.134 -07 000000606 INF: FPGA: Recv ZSGSRD 35299
17-03-18 03:12:05.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.144 -07 000000576 INF: FPGA: Recv ZSGSRD 35294
17-03-18 03:12:05.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.154 -07 000000569 INF: FPGA: Recv ZSGSRD 35303
17-03-18 03:12:05.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:05.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.164 -07 000000626 INF: FPGA: Recv ZSGSRD 35295
17-03-18 03:12:05.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.174 -07 000000501 INF: FPGA: Recv ZSGSRD 35292
17-03-18 03:12:05.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.184 -07 000000629 INF: FPGA: Recv ZSGSRD 35298
17-03-18 03:12:05.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:05.194 -07 000000467 INF: FPGA: Recv ZPIEZORD 31047
17-03-18 03:12:05.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.204 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.4 V.
17-03-18 03:12:05.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35297 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35298 (-166.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35292 (-166.2 uncal um), Max = 35303 (-166.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:12:05.204 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35297, posNoise = 6, negNoise = 5
17-03-18 03:12:05.204 -07 000000610 INF: Z Motor: After move to -0.167073, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:05.204 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 109 ms (allowed 150 ms), total time = 1554 ms
17-03-18 03:12:05.204 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:05.254 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-18 03:12:05.254 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:05.254 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.167078767978871. ----------
17-03-18 03:12:05.254 -07 000000610 INF: Cycle	109	Tile	17	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:05.254 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36320, sync = True, waitForSettling = True)
17-03-18 03:12:05.254 -07 000000610 INF: Z Motor: Moving to -0.166262 mm, started at -0.167079 mm, distance = 0.82 um
17-03-18 03:12:05.254 -07 000000610 INF: FPGA: Xmit ZDACW 36320\n [Z Motor]
17-03-18 03:12:05.254 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:12:05.264 -07 000000610 INF: FPGA: 'ZDACW 36320' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:05.264 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:05.264 -07 000000606 INF: FPGA: Recv ZDACR 36320
17-03-18 03:12:05.274 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.274 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:05.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.424 -07 000000502 INF: FPGA: Recv ZSGSRD 35168
17-03-18 03:12:05.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:05.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.434 -07 000000629 INF: FPGA: Recv ZSGSRD 35180
17-03-18 03:12:05.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.444 -07 000000561 INF: FPGA: Recv ZSGSRD 35171
17-03-18 03:12:05.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.454 -07 000000591 INF: FPGA: Recv ZSGSRD 35175
17-03-18 03:12:05.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.464 -07 000000467 INF: FPGA: Recv ZSGSRD 35175
17-03-18 03:12:05.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.474 -07 000000618 INF: FPGA: Recv ZSGSRD 35168
17-03-18 03:12:05.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.484 -07 000000462 INF: FPGA: Recv ZSGSRD 35174
17-03-18 03:12:05.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.494 -07 000000512 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:12:05.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.504 -07 000000591 INF: FPGA: Recv ZSGSRD 35172
17-03-18 03:12:05.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:05.514 -07 000000462 INF: FPGA: Recv ZSGSRD 35175
17-03-18 03:12:05.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:05.524 -07 000000502 INF: FPGA: Recv ZPIEZORD 30835
17-03-18 03:12:05.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:05.534 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.542 V. Piezo Error = -9.5 V.
17-03-18 03:12:05.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35173 (-165.4 uncal um), Error = 0.8 uncal um, Median = 35173 (-165.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35168 (-165.4 uncal um), Max = 35180 (-165.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:12:05.534 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35173, posNoise = 7, negNoise = 5
17-03-18 03:12:05.534 -07 000000610 INF: Z Motor: After move to -0.166262, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:05.534 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:12:05.534 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:05.534 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:05.534 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:05.534 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:05.534 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:05.534 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:05.534 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:05.534 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:05.534 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:05.534 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:05.534 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:05.534 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:05.544 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:05.544 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:05.544 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:05.544 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:05.554 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:12:05.554 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:05.554 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:12:05.554 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:05.564 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36497 150\n [Camera]
17-03-18 03:12:05.764 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:06.164 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 597
17-03-18 03:12:06.164 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 597
17-03-18 03:12:06.164 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 597
17-03-18 03:12:06.164 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 597
17-03-18 03:12:06.164 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:06.164 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:06.184 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:06.184 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:12:06.184 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:06.184 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:12:06.354 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36497 787
17-03-18 03:12:06.504 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:06.554 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:06.554 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:12:06.554 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:12:06.554 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:06.554 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:06.564 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:12:06.564 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:12:06.564 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:06.564 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:06.564 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:12:06.564 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:12:06.694 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:06.694 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:06.694 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:06.704 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:06.704 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:06.704 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:06.704 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:06.704 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) start.
17-03-18 03:12:06.704 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:06.704 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:12:06.884 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:06.894 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:06.894 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36497 150' command took 2 ms to send, 1320 ms to get response, and 1329 ms overall
17-03-18 03:12:06.894 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 03:12:06.894 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17626953125, Z-Position -0.166282165673293. ------
17-03-18 03:12:06.894 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:06.894 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.17270 mm
17-03-18 03:12:06.894 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:06.894 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:12:06.894 -07 000000467 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 03:12:06.904 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:06.904 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 37726, sync = True, waitForSettling = False)
17-03-18 03:12:06.904 -07 000000561 INF: Z Motor: Moving to -0.172699 mm, started at -0.166282 mm, distance = -6.42 um
17-03-18 03:12:06.904 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:06.904 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:06.904 -07 000000462 INF: FPGA: Recv YRDPOS 149865
17-03-18 03:12:06.914 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:06.914 -07 000000467 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:06.914 -07 000000467 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:06.914 -07 000000467 INF: Y Motor: Moving 1354 steps-34
17-03-18 03:12:06.914 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:12:06.924 -07 000000561 INF: FPGA: Xmit ZDACW 37726\n [Z Motor]
17-03-18 03:12:06.924 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:12:06.934 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:06.934 -07 000000561 INF: FPGA: 'ZDACW 37726' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:12:06.944 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:06.944 -07 000000579 INF: FPGA: Recv ZDACR 37726
17-03-18 03:12:06.954 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:06.954 -07 000000561 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-18 03:12:07.074 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 03:12:07.074 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 03:12:07.074 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:07.084 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1476890328, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:12:07.084 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:12:07.084 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:07.084 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:07.084 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:12:07.084 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:12:07.094 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:12:07.114 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:12:07.114 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-18 03:12:07.304 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 03:12:07.304 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:12:07.344 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:07.354 -07 000000591 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:12:07.354 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:07.354 -07 000000467 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:07.354 -07 000000467 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:12:07.354 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.132 mm/sec
17-03-18 03:12:08.304 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:08.304 -07 000000455 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:12:08.314 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:08.314 -07 000000467 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:08.334 -07 000000467 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:08.334 -07 000000467 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:08.334 -07 000000467 INF: Y Motor: Moved to 74.0083 after 1433 ms (table move)
17-03-18 03:12:08.334 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172699 mm (DAC = 37726)
17-03-18 03:12:08.334 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.334 -07 000000579 INF: FPGA: Recv ZSGSRD 36174
17-03-18 03:12:08.344 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:08.344 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.344 -07 000000430 INF: FPGA: Recv ZSGSRD 36172
17-03-18 03:12:08.354 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.354 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.354 -07 000000424 INF: FPGA: Recv ZSGSRD 36176
17-03-18 03:12:08.364 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.364 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.364 -07 000000501 INF: FPGA: Recv ZSGSRD 36169
17-03-18 03:12:08.374 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.374 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.374 -07 000000561 INF: FPGA: Recv ZSGSRD 36172
17-03-18 03:12:08.384 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.384 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.384 -07 000000579 INF: FPGA: Recv ZSGSRD 36178
17-03-18 03:12:08.394 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.394 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.394 -07 000000462 INF: FPGA: Recv ZSGSRD 36182
17-03-18 03:12:08.404 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.404 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.404 -07 000000455 INF: FPGA: Recv ZSGSRD 36169
17-03-18 03:12:08.414 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.414 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.414 -07 000000444 INF: FPGA: Recv ZSGSRD 36167
17-03-18 03:12:08.424 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.424 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:08.424 -07 000000430 INF: FPGA: Recv ZSGSRD 36170
17-03-18 03:12:08.434 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.434 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:08.434 -07 000000424 INF: FPGA: Recv ZPIEZORD 32191
17-03-18 03:12:08.444 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:08.444 -07 000000512 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.757 V. Piezo Error = -8.8 V.
17-03-18 03:12:08.444 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.7 um, Read 10 ADC samples: Avg = 36173 (-171.8 uncal um), Error = 0.9 uncal um, Median = 36172 (-171.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36167 (-171.8 uncal um), Max = 36182 (-171.9 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:12:08.444 -07 000000512 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36173, posNoise = 9, negNoise = 6
17-03-18 03:12:08.444 -07 000000512 INF: Z Motor: After move to -0.172699, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:08.444 -07 000000512 INF: Z Motor: Settle wait time = 1436 ms, measure time = 104 ms (allowed 150 ms), total time = 1540 ms
17-03-18 03:12:08.444 -07 000000512 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:08.494 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 03:12:08.494 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:08.494 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:08.494 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:08.494 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:08.494 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:08.494 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:12:08.494 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:08.494 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:08.494 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:12:08.504 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:08.504 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:12:08.514 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:12:08.514 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 03:12:08.514 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:12:08.544 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.024884,
17-03-18 03:12:08.564 -07 000000424 INF: FPGA: Recv @CAMSNAP turning led on 43
17-03-18 03:12:08.864 -07 000000461 INF: FPGA: Recv @CAMSNAP img rdy 343
17-03-18 03:12:08.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 343
17-03-18 03:12:08.864 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:12:08.864 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1165594328, 0x0, 559484976) start.
17-03-18 03:12:08.904 -07 000000462 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:12:08.904 -07 000000590 INF: FPGA: Recv CAMSNAP
17-03-18 03:12:08.904 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:12:08.994 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1165594328, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 03:12:08.994 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:08.994 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:12:08.994 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 03:12:09.004 -07 000000501 INF: Autofocus start
17-03-18 03:12:09.004 -07 000000501 INF: MeasureProfile start
17-03-18 03:12:09.004 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:09.004 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:09.014 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:09.014 -07 000000579 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:12:09.014 -07 000000501 INF: MeasureProfile done
17-03-18 03:12:09.014 -07 000000501 INF: X=-32  Z correction [um]=-0.2344
17-03-18 03:12:09.014 -07 000000501 INF: Autofocus finished
17-03-18 03:12:09.214 -07 000000444 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:12:09.214 -07 000000579 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 192 ms to get response, and 202 ms overall
17-03-18 03:12:09.214 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.172706377815054. ----------
17-03-18 03:12:09.214 -07 000000610 INF: Cycle	109	Tile	18	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:09.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36188, sync = True, waitForSettling = True)
17-03-18 03:12:09.224 -07 000000610 INF: Z Motor: Moving to -0.165658 mm, started at -0.172706 mm, distance = 7.05 um
17-03-18 03:12:09.224 -07 000000610 INF: FPGA: Xmit ZDACW 36188\n [Z Motor]
17-03-18 03:12:09.224 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:12:09.234 -07 000000610 INF: FPGA: 'ZDACW 36188' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:09.234 -07 000000462 INF: FPGA: Recv ZDACR 36188
17-03-18 03:12:09.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:09.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.394 -07 000000606 INF: FPGA: Recv ZSGSRD 35080
17-03-18 03:12:09.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:09.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.404 -07 000000569 INF: FPGA: Recv ZSGSRD 35082
17-03-18 03:12:09.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.414 -07 000000591 INF: FPGA: Recv ZSGSRD 35081
17-03-18 03:12:09.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.424 -07 000000618 INF: FPGA: Recv ZSGSRD 35076
17-03-18 03:12:09.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.434 -07 000000501 INF: FPGA: Recv ZSGSRD 35076
17-03-18 03:12:09.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.444 -07 000000461 INF: FPGA: Recv ZSGSRD 35073
17-03-18 03:12:09.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.454 -07 000000424 INF: FPGA: Recv ZSGSRD 35073
17-03-18 03:12:09.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.464 -07 000000579 INF: FPGA: Recv ZSGSRD 35075
17-03-18 03:12:09.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.474 -07 000000629 INF: FPGA: Recv ZSGSRD 35077
17-03-18 03:12:09.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:09.484 -07 000000455 INF: FPGA: Recv ZSGSRD 35072
17-03-18 03:12:09.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:09.494 -07 000000502 INF: FPGA: Recv ZPIEZORD 30750
17-03-18 03:12:09.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:09.504 -07 000000610 INF: Z Motor: Piezo is near 45.7 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.522 V. Piezo Error = -9.5 V.
17-03-18 03:12:09.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.7 um, Read 10 ADC samples: Avg = 35076 (-164.8 uncal um), Error = 0.9 uncal um, Median = 35076 (-164.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35072 (-164.8 uncal um), Max = 35082 (-164.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:12:09.504 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35076, posNoise = 6, negNoise = 4
17-03-18 03:12:09.504 -07 000000610 INF: Z Motor: After move to -0.165658, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:09.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:12:09.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:09.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:09.504 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:09.504 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:09.504 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:09.504 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:09.504 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:09.504 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:09.504 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:09.504 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:09.504 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:09.504 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:09.504 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:09.504 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:09.514 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:09.514 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:09.514 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:12:09.514 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:12:09.514 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:12:09.514 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:12:09.524 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36365 150\n [Camera]
17-03-18 03:12:09.724 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:10.124 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:10.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:10.124 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:10.124 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:10.124 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:12:10.124 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:10.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:10.124 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:10.254 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:10.254 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:12:10.314 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36365 787
17-03-18 03:12:10.464 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:10.514 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:12:10.514 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:12:10.514 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:10.514 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:10.514 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:12:10.624 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:12:10.624 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:12:10.624 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:10.634 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:10.634 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms.
17-03-18 03:12:10.664 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:10.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:10.664 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:10.664 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:10.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:10.664 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:10.674 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:10.674 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:12:10.674 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:10.674 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:12:10.854 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:10.854 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:10.854 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36365 150' command took 2 ms to send, 1323 ms to get response, and 1330 ms overall
17-03-18 03:12:10.854 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165500
17-03-18 03:12:10.854 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16550 mm
17-03-18 03:12:10.854 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:10.854 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:12:10.854 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36153, sync = True, waitForSettling = False)
17-03-18 03:12:10.854 -07 000000502 INF: Z Motor: Moving to -0.165498 mm, started at -0.165659 mm, distance = 0.16 um
17-03-18 03:12:10.854 -07 000000502 INF: FPGA: Xmit ZDACW 36153\n [Z Motor]
17-03-18 03:12:10.854 -07 000000590 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 03:12:10.864 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:10.864 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:12:10.864 -07 000000502 INF: FPGA: 'ZDACW 36153' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-18 03:12:10.864 -07 000000629 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:12:10.874 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:10.874 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:10.874 -07 000000590 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:10.874 -07 000000590 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:10.874 -07 000000590 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:12:10.874 -07 000000501 INF: FPGA: Recv ZDACR 36153
17-03-18 03:12:10.884 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:12:10.884 -07 000000502 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:12:10.884 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:11.054 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:12:11.054 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:12:11.054 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:11.054 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:12:11.054 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:12:11.054 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:11.054 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:11.054 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:11.054 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:12:11.064 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:12:11.254 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:12:11.254 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 03:12:11.284 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:11.294 -07 000000512 INF: FPGA: Recv YRDPOS 153255
17-03-18 03:12:11.294 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:11.294 -07 000000590 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:11.294 -07 000000590 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 03:12:11.294 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.844 mm, average velocity = 2.187 mm/sec
17-03-18 03:12:11.554 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:11.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:12.244 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:12.244 -07 000000626 INF: FPGA: Recv YRDPOS 153256
17-03-18 03:12:12.254 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.254 -07 000000590 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:12.264 -07 000000590 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:12.274 -07 000000590 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:12:12.274 -07 000000590 INF: Y Motor: Moved to 74.8320 after 1412 ms (table move)
17-03-18 03:12:12.274 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165498 mm (DAC = 36153)
17-03-18 03:12:12.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.274 -07 000000424 INF: FPGA: Recv ZSGSRD 35048
17-03-18 03:12:12.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:12.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.284 -07 000000501 INF: FPGA: Recv ZSGSRD 35047
17-03-18 03:12:12.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.294 -07 000000576 INF: FPGA: Recv ZSGSRD 35048
17-03-18 03:12:12.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.304 -07 000000455 INF: FPGA: Recv ZSGSRD 35049
17-03-18 03:12:12.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.314 -07 000000502 INF: FPGA: Recv ZSGSRD 35049
17-03-18 03:12:12.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.324 -07 000000618 INF: FPGA: Recv ZSGSRD 35058
17-03-18 03:12:12.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.334 -07 000000467 INF: FPGA: Recv ZSGSRD 35061
17-03-18 03:12:12.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.344 -07 000000576 INF: FPGA: Recv ZSGSRD 35058
17-03-18 03:12:12.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.354 -07 000000606 INF: FPGA: Recv ZSGSRD 35050
17-03-18 03:12:12.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.364 -07 000000444 INF: FPGA: Recv ZSGSRD 35052
17-03-18 03:12:12.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.374 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:12.374 -07 000000618 INF: FPGA: Recv ZPIEZORD 30748
17-03-18 03:12:12.384 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.384 -07 000000610 INF: Z Motor: Piezo is near 45.7 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.517 V. Piezo Error = -9.5 V.
17-03-18 03:12:12.384 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.5 um, Read 10 ADC samples: Avg = 35052 (-164.6 uncal um), Error = 0.9 uncal um, Median = 35050 (-164.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35047 (-164.6 uncal um), Max = 35061 (-164.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:12:12.384 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35052, posNoise = 9, negNoise = 5
17-03-18 03:12:12.384 -07 000000610 INF: Z Motor: After move to -0.165498, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:12.384 -07 000000610 INF: Z Motor: Settle wait time = 1414 ms, measure time = 107 ms (allowed 150 ms), total time = 1521 ms
17-03-18 03:12:12.384 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:12.434 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1573 ms
17-03-18 03:12:12.434 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:12.434 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.16550483600414. ----------
17-03-18 03:12:12.434 -07 000000610 INF: Cycle	109	Tile	19	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:12.434 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 35977, sync = True, waitForSettling = True)
17-03-18 03:12:12.434 -07 000000610 INF: Z Motor: Moving to -0.164692 mm, started at -0.165505 mm, distance = 0.81 um
17-03-18 03:12:12.434 -07 000000610 INF: FPGA: Xmit ZDACW 35977\n [Z Motor]
17-03-18 03:12:12.434 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:12:12.444 -07 000000610 INF: FPGA: 'ZDACW 35977' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:12.444 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:12.444 -07 000000576 INF: FPGA: Recv ZDACR 35977
17-03-18 03:12:12.454 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.454 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:12.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.604 -07 000000561 INF: FPGA: Recv ZSGSRD 34925
17-03-18 03:12:12.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.614 -07 000000444 INF: FPGA: Recv ZSGSRD 34924
17-03-18 03:12:12.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.624 -07 000000462 INF: FPGA: Recv ZSGSRD 34926
17-03-18 03:12:12.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.634 -07 000000591 INF: FPGA: Recv ZSGSRD 34924
17-03-18 03:12:12.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.644 -07 000000629 INF: FPGA: Recv ZSGSRD 34933
17-03-18 03:12:12.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.654 -07 000000618 INF: FPGA: Recv ZSGSRD 34927
17-03-18 03:12:12.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.664 -07 000000569 INF: FPGA: Recv ZSGSRD 34923
17-03-18 03:12:12.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.674 -07 000000430 INF: FPGA: Recv ZSGSRD 34928
17-03-18 03:12:12.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.684 -07 000000512 INF: FPGA: Recv ZSGSRD 34924
17-03-18 03:12:12.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:12.694 -07 000000579 INF: FPGA: Recv ZSGSRD 34928
17-03-18 03:12:12.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.704 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:12.704 -07 000000561 INF: FPGA: Recv ZPIEZORD 30571
17-03-18 03:12:12.714 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:12.714 -07 000000610 INF: Z Motor: Piezo is near 45.3 V (nominally 0 to 100 V), expect near 54.9 V, since DAC is at 5.490 V. Piezo Error = -9.6 V.
17-03-18 03:12:12.714 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -164.7 um, Read 10 ADC samples: Avg = 34926 (-163.8 uncal um), Error = 0.9 uncal um, Median = 34926 (-163.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 34923 (-163.8 uncal um), Max = 34933 (-163.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:12:12.714 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34926, posNoise = 7, negNoise = 3
17-03-18 03:12:12.714 -07 000000610 INF: Z Motor: After move to -0.164692, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:12.714 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:12:12.714 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:12.714 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:12.714 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:12.714 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:12.714 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:12.714 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:12.714 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:12:12.714 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:12.714 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:12.714 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:12.714 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:12.714 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:12.724 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:12.724 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:12.724 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:12.724 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:12.734 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:12:12.734 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:12:12.734 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:12:12.734 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:12:12.734 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 36153 150\n [Camera]
17-03-18 03:12:12.934 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:13.334 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:13.334 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:13.334 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:13.334 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:13.334 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:12:13.334 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:13.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:13.334 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:13.334 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:13.334 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:12:13.524 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36153 787
17-03-18 03:12:13.674 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:13.714 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:12:13.714 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:12:13.714 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:13.724 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:13.724 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:12:13.724 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:12:13.724 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:13.724 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:13.724 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:12:13.724 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:12:13.874 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:13.874 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:13.874 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:13.874 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:13.874 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:13.874 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:13.874 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:13.874 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:12:13.884 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:13.884 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:12:13.904 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.045313,
17-03-18 03:12:14.064 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:14.064 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:14.064 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 36153 150' command took 2 ms to send, 1325 ms to get response, and 1332 ms overall
17-03-18 03:12:14.254 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:12:14.254 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:12:14.254 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:14.264 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 03:12:14.264 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:12:14.264 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:14.264 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:14.264 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:12:14.264 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:12:14.264 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:14.274 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:12:14.304 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:12:14.304 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:12:14.344 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-18 03:12:14.354 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 03:12:14.354 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 03:12:14.354 -07 000000462 INF: FPGA: Recv EMCUR 
17-03-18 03:12:14.364 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:14.364 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 03:12:14.864 -07 000000561 INF: FPGA: Recv EMIN
17-03-18 03:12:14.864 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 494 ms to get response, and 504 ms overall
17-03-18 03:12:14.864 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 03:12:14.864 -07 000000576 INF: FPGA: Recv EMCUR 
17-03-18 03:12:14.874 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:14.874 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:12:14.874 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83203125, Z-Position -0.164695385274278. ------
17-03-18 03:12:14.874 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:14.874 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13953 mm
17-03-18 03:12:14.874 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:14.874 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 03:12:14.874 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 30480, sync = True, waitForSettling = False)
17-03-18 03:12:14.874 -07 000000606 INF: Z Motor: Moving to -0.139528 mm, started at -0.164695 mm, distance = 25.17 um
17-03-18 03:12:14.874 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:14.874 -07 000000444 INF: Y Motor: Moving to 59.9126 mm, started at 74.8320 mm, delta = -14.9194 mm
17-03-18 03:12:14.884 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:14.884 -07 000000606 INF: FPGA: Xmit ZDACW 30480\n [Z Motor]
17-03-18 03:12:14.884 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:12:14.894 -07 000000606 INF: FPGA: 'ZDACW 30480' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:12:14.894 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:14.894 -07 000000461 INF: FPGA: Recv ZDACR 30480
17-03-18 03:12:14.904 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:14.904 -07 000000606 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:12:14.904 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:14.904 -07 000000576 INF: FPGA: Recv YRDPOS 153257
17-03-18 03:12:14.914 -07 000000629 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:12:14.914 -07 000000444 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 31 ms overall
17-03-18 03:12:14.914 -07 000000444 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:14.914 -07 000000444 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 03:12:14.914 -07 000000444 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 03:12:14.924 -07 000000444 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 03:12:15.114 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:12:15.114 -07 000000629 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 232 ms overall
17-03-18 03:12:16.544 -07 000000561 INF: FPGA: Recv YMVTO 122703 23905
17-03-18 03:12:16.544 -07 000000444 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1619 ms to get response, and 1634 ms overall
17-03-18 03:12:16.544 -07 000000444 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 03:12:16.544 -07 000000444 INF: Y Motor: To move from 74.833 to 59.913 (-14.919 mm) should take 23872 steps, but required 23905 steps (14.941 mm). Slippage = 0.021 mm (0.00%).
17-03-18 03:12:16.544 -07 000000444 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1634 ms, distance = 14.919 mm, average velocity = 9.131 mm/sec
17-03-18 03:12:16.554 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:16.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:19.264 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.014009,
17-03-18 03:12:19.394 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:19.394 -07 000000502 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:12:19.404 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:19.404 -07 000000444 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:19.444 -07 000000444 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:19.444 -07 000000444 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-18 03:12:19.444 -07 000000444 INF: Y Motor: Moved to 59.9106 after 4569 ms
17-03-18 03:12:19.454 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139528 mm (DAC = 30480)
17-03-18 03:12:19.454 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.454 -07 000000576 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:12:19.464 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.464 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.464 -07 000000430 INF: FPGA: Recv ZSGSRD 31008
17-03-18 03:12:19.474 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.474 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.474 -07 000000512 INF: FPGA: Recv ZSGSRD 31004
17-03-18 03:12:19.484 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:19.484 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.484 -07 000000462 INF: FPGA: Recv ZSGSRD 31011
17-03-18 03:12:19.494 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.494 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.494 -07 000000424 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:12:19.504 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.504 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.504 -07 000000606 INF: FPGA: Recv ZSGSRD 31008
17-03-18 03:12:19.514 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.514 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.514 -07 000000561 INF: FPGA: Recv ZSGSRD 31009
17-03-18 03:12:19.524 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.524 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.524 -07 000000626 INF: FPGA: Recv ZSGSRD 31008
17-03-18 03:12:19.534 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.534 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.534 -07 000000512 INF: FPGA: Recv ZSGSRD 31012
17-03-18 03:12:19.544 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.544 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:19.544 -07 000000569 INF: FPGA: Recv ZSGSRD 31005
17-03-18 03:12:19.554 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.554 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:19.554 -07 000000444 INF: FPGA: Recv ZPIEZORD 26485
17-03-18 03:12:19.564 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:19.564 -07 000000618 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.651 V. Piezo Error = -9.9 V.
17-03-18 03:12:19.564 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.5 um, Read 10 ADC samples: Avg = 31008 (-138.7 uncal um), Error = 0.8 uncal um, Median = 31008 (-138.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 31004 (-138.7 uncal um), Max = 31012 (-138.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:12:19.564 -07 000000618 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31008, posNoise = 4, negNoise = 4
17-03-18 03:12:19.564 -07 000000618 INF: Z Motor: After move to -0.139528, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:19.564 -07 000000618 INF: Z Motor: Settle wait time = 4572 ms, measure time = 110 ms (allowed 150 ms), total time = 4682 ms
17-03-18 03:12:19.564 -07 000000618 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:19.604 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4724 ms
17-03-18 03:12:19.604 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:19.604 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:19.604 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:19.604 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:19.604 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:19.604 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:12:19.604 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:19.604 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:12:19.604 -07 000000591 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 03:12:19.624 -07 000000591 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 20 ms.
17-03-18 03:12:19.624 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:12:19.634 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:19.634 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:12:19.634 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 03:12:19.634 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 32 ms.
17-03-18 03:12:19.644 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:12:19.684 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:12:19.984 -07 000000606 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:12:19.984 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:12:19.984 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:12:19.984 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1130172064, 0x0, 559484976) start.
17-03-18 03:12:20.024 -07 000000591 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:12:20.024 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-18 03:12:20.024 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 375 ms to get response, and 384 ms overall
17-03-18 03:12:20.104 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1130172064, 0x0, 559484976) end. Duration was 115 ms.
17-03-18 03:12:20.104 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:20.104 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:12:20.104 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 03:12:20.124 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:20.124 -07 000000576 INF: Image SNR check: start
17-03-18 03:12:20.124 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:20.134 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:20.134 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:12:20.144 -07 000000576 INF: Image SNR check: pass  [peak (Max-Min)=138.34]
17-03-18 03:12:20.144 -07 000000576 INF: Autofocus start
17-03-18 03:12:20.144 -07 000000576 INF: MeasureProfile start
17-03-18 03:12:20.154 -07 000000576 INF: MeasureProfile done
17-03-18 03:12:20.154 -07 000000576 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:12:20.154 -07 000000576 INF: Autofocus finished
17-03-18 03:12:20.334 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:12:20.334 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:12:20.334 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139525322102859. ----------
17-03-18 03:12:20.334 -07 000000610 INF: Cycle	109	Tile	1	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:20.344 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28987, sync = True, waitForSettling = True)
17-03-18 03:12:20.344 -07 000000610 INF: Z Motor: Moving to -0.132694 mm, started at -0.139525 mm, distance = 6.83 um
17-03-18 03:12:20.344 -07 000000610 INF: FPGA: Xmit ZDACW 28987\n [Z Motor]
17-03-18 03:12:20.344 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:12:20.354 -07 000000610 INF: FPGA: 'ZDACW 28987' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:20.354 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:20.354 -07 000000626 INF: FPGA: Recv ZDACR 28987
17-03-18 03:12:20.364 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.364 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:20.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.514 -07 000000579 INF: FPGA: Recv ZSGSRD 29952
17-03-18 03:12:20.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:20.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.524 -07 000000462 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:12:20.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.534 -07 000000618 INF: FPGA: Recv ZSGSRD 29940
17-03-18 03:12:20.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.544 -07 000000561 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:12:20.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.554 -07 000000626 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:12:20.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.564 -07 000000502 INF: FPGA: Recv ZSGSRD 29952
17-03-18 03:12:20.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.574 -07 000000590 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:12:20.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.584 -07 000000629 INF: FPGA: Recv ZSGSRD 29938
17-03-18 03:12:20.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.594 -07 000000561 INF: FPGA: Recv ZSGSRD 29951
17-03-18 03:12:20.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:20.604 -07 000000629 INF: FPGA: Recv ZSGSRD 29946
17-03-18 03:12:20.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.614 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:20.614 -07 000000424 INF: FPGA: Recv ZPIEZORD 25370
17-03-18 03:12:20.624 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:20.624 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -10.0 V.
17-03-18 03:12:20.624 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29945 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29946 (-131.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29938 (-131.9 uncal um), Max = 29952 (-132.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:12:20.624 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29945, posNoise = 7, negNoise = 7
17-03-18 03:12:20.624 -07 000000610 INF: Z Motor: After move to -0.132694, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:20.624 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 03:12:20.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:20.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:20.634 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:20.634 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:20.634 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:20.634 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:20.634 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:20.634 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:20.634 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 03:12:20.634 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 03:12:20.634 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:12:20.634 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:20.634 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:20.634 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:20.654 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 03:12:20.654 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:20.654 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 03:12:20.654 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:20.654 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:12:20.654 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:20.664 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:12:20.664 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 34 ms.
17-03-18 03:12:20.664 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 29164 150\n [Camera]
17-03-18 03:12:20.864 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 194
17-03-18 03:12:21.264 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:21.274 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:21.274 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:21.274 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:21.274 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:12:21.274 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:21.274 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:21.274 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:21.274 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:21.274 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:12:21.464 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29164 787
17-03-18 03:12:21.554 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:21.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:21.614 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:21.664 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 03:12:21.664 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:12:21.664 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:21.664 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 03:12:21.664 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:12:21.664 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:21.664 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:21.664 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:12:21.664 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:21.674 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 03:12:21.804 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:21.804 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:21.804 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:21.914 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:21.914 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:21.914 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:21.924 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:21.924 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:21.924 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:12:21.924 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:12:21.994 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:21.994 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:21.994 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 29164 150' command took 2 ms to send, 1317 ms to get response, and 1329 ms overall
17-03-18 03:12:21.994 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:12:22.004 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 2 at Y-position 59.91064453125, Z-Position -0.132696384596167. ------
17-03-18 03:12:22.004 -07 000000590 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:22.004 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13917 mm
17-03-18 03:12:22.004 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:22.004 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 03:12:22.004 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 30402, sync = True, waitForSettling = False)
17-03-18 03:12:22.004 -07 000000629 INF: Z Motor: Moving to -0.139171 mm, started at -0.132696 mm, distance = -6.48 um
17-03-18 03:12:22.004 -07 000000462 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-18 03:12:22.004 -07 000000430 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:22.014 -07 000000590 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:22.014 -07 000000629 INF: FPGA: Xmit ZDACW 30402\n [Z Motor]
17-03-18 03:12:22.014 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:12:22.024 -07 000000629 INF: FPGA: 'ZDACW 30402' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:12:22.024 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:22.024 -07 000000576 INF: FPGA: Recv ZDACR 30402
17-03-18 03:12:22.034 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:22.034 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:22.034 -07 000000629 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:12:22.034 -07 000000461 INF: FPGA: Recv YRDPOS 122697
17-03-18 03:12:22.044 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 33 ms overall
17-03-18 03:12:22.044 -07 000000462 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:22.044 -07 000000462 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:22.044 -07 000000462 INF: Y Motor: Moving 1331 steps2
17-03-18 03:12:22.044 -07 000000590 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:12:22.054 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:22.244 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:12:22.244 -07 000000590 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 233 ms overall
17-03-18 03:12:22.324 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 03:12:22.324 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:12:22.324 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:22.324 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 03:12:22.324 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 03:12:22.324 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:22.334 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:22.334 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms.
17-03-18 03:12:22.334 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:22.334 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 03:12:22.424 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:12:22.424 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:12:22.464 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:22.464 -07 000000569 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:12:22.474 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:22.474 -07 000000462 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:22.474 -07 000000462 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 03:12:22.474 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.144 mm/sec
17-03-18 03:12:23.424 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:23.424 -07 000000590 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:12:23.434 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:23.434 -07 000000462 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:23.464 -07 000000462 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:23.464 -07 000000462 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:23.464 -07 000000462 INF: Y Motor: Moved to 60.7324 after 1454 ms (table move)
17-03-18 03:12:23.464 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139171 mm (DAC = 30402)
17-03-18 03:12:23.464 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.464 -07 000000502 INF: FPGA: Recv ZSGSRD 30959
17-03-18 03:12:23.474 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:23.474 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.474 -07 000000455 INF: FPGA: Recv ZSGSRD 30954
17-03-18 03:12:23.484 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.484 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.484 -07 000000590 INF: FPGA: Recv ZSGSRD 30954
17-03-18 03:12:23.494 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.494 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.494 -07 000000444 INF: FPGA: Recv ZSGSRD 30962
17-03-18 03:12:23.504 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.504 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.504 -07 000000579 INF: FPGA: Recv ZSGSRD 30955
17-03-18 03:12:23.514 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.514 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.514 -07 000000629 INF: FPGA: Recv ZSGSRD 30952
17-03-18 03:12:23.524 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.524 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.524 -07 000000606 INF: FPGA: Recv ZSGSRD 30943
17-03-18 03:12:23.534 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.534 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.534 -07 000000512 INF: FPGA: Recv ZSGSRD 30955
17-03-18 03:12:23.544 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.544 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.544 -07 000000618 INF: FPGA: Recv ZSGSRD 30962
17-03-18 03:12:23.554 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.554 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:23.554 -07 000000591 INF: FPGA: Recv ZSGSRD 30961
17-03-18 03:12:23.564 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.564 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:23.564 -07 000000502 INF: FPGA: Recv ZPIEZORD 26700
17-03-18 03:12:23.574 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:23.574 -07 000000424 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.639 V. Piezo Error = -9.4 V.
17-03-18 03:12:23.574 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.2 um, Read 10 ADC samples: Avg = 30956 (-138.4 uncal um), Error = 0.8 uncal um, Median = 30955 (-138.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30943 (-138.3 uncal um), Max = 30962 (-138.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-18 03:12:23.574 -07 000000424 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30956, posNoise = 6, negNoise = 13
17-03-18 03:12:23.574 -07 000000424 INF: Z Motor: After move to -0.139171, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:23.574 -07 000000424 INF: Z Motor: Settle wait time = 1457 ms, measure time = 107 ms (allowed 150 ms), total time = 1564 ms
17-03-18 03:12:23.574 -07 000000424 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:23.624 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1616 ms
17-03-18 03:12:23.624 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:23.624 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:23.624 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:23.624 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:23.624 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:23.624 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:12:23.624 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:23.624 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:23.624 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:12:23.634 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:23.634 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:12:23.644 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:12:23.644 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:12:23.644 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:12:23.694 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:12:23.994 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:12:23.994 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:12:23.994 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:12:23.994 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1130172064, 0x0, 559484976) start.
17-03-18 03:12:24.034 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:12:24.034 -07 000000462 INF: FPGA: Recv CAMSNAP
17-03-18 03:12:24.034 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 03:12:24.114 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1130172064, 0x0, 559484976) end. Duration was 125 ms.
17-03-18 03:12:24.114 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:24.124 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:12:24.124 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 03:12:24.134 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:24.134 -07 000000590 INF: Autofocus start
17-03-18 03:12:24.134 -07 000000590 INF: MeasureProfile start
17-03-18 03:12:24.134 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:24.144 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:24.144 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:12:24.144 -07 000000590 INF: MeasureProfile done
17-03-18 03:12:24.144 -07 000000590 INF: X=6  Z correction [um]=0.004914018
17-03-18 03:12:24.144 -07 000000590 INF: Autofocus finished
17-03-18 03:12:24.344 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:12:24.344 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:12:24.344 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.139191263071487. ----------
17-03-18 03:12:24.344 -07 000000610 INF: Cycle	109	Tile	2	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:24.354 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28915, sync = True, waitForSettling = True)
17-03-18 03:12:24.354 -07 000000610 INF: Z Motor: Moving to -0.132364 mm, started at -0.139191 mm, distance = 6.83 um
17-03-18 03:12:24.354 -07 000000610 INF: FPGA: Xmit ZDACW 28915\n [Z Motor]
17-03-18 03:12:24.354 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:12:24.364 -07 000000610 INF: FPGA: 'ZDACW 28915' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:24.364 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:24.364 -07 000000576 INF: FPGA: Recv ZDACR 28915
17-03-18 03:12:24.374 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.374 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:24.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.524 -07 000000629 INF: FPGA: Recv ZSGSRD 29893
17-03-18 03:12:24.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:24.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.534 -07 000000569 INF: FPGA: Recv ZSGSRD 29899
17-03-18 03:12:24.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.544 -07 000000467 INF: FPGA: Recv ZSGSRD 29894
17-03-18 03:12:24.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.554 -07 000000591 INF: FPGA: Recv ZSGSRD 29889
17-03-18 03:12:24.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.564 -07 000000626 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:12:24.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.574 -07 000000606 INF: FPGA: Recv ZSGSRD 29886
17-03-18 03:12:24.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.584 -07 000000501 INF: FPGA: Recv ZSGSRD 29896
17-03-18 03:12:24.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.594 -07 000000430 INF: FPGA: Recv ZSGSRD 29898
17-03-18 03:12:24.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.604 -07 000000579 INF: FPGA: Recv ZSGSRD 29891
17-03-18 03:12:24.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:24.624 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.004458,
17-03-18 03:12:24.624 -07 000000618 INF: FPGA: Recv ZSGSRD 29896
17-03-18 03:12:24.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:24.634 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:24.634 -07 000000606 INF: FPGA: Recv ZPIEZORD 25316
17-03-18 03:12:24.644 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:24.644 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.412 V. Piezo Error = -10.0 V.
17-03-18 03:12:24.644 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29894 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29895 (-131.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29886 (-131.5 uncal um), Max = 29899 (-131.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:12:24.644 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29894, posNoise = 5, negNoise = 8
17-03-18 03:12:24.644 -07 000000610 INF: Z Motor: After move to -0.132364, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:24.644 -07 000000610 INF: Z Motor: MoveAbsStepped took 289 ms)
17-03-18 03:12:24.644 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:24.644 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:24.644 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:24.644 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:24.644 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:24.644 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:24.644 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:24.644 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:24.644 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:24.644 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:24.644 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:24.644 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:24.654 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:12:24.654 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:24.654 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:24.654 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:24.664 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:24.664 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:24.664 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:12:24.664 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:24.684 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 29092 150\n [Camera]
17-03-18 03:12:24.874 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:25.284 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:25.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:25.284 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:25.284 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:25.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:25.284 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:25.284 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:25.284 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:12:25.284 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:25.284 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1144848144, 0x0, 391868352) start.
17-03-18 03:12:25.474 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29092 787
17-03-18 03:12:25.624 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:25.684 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1144848144, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:12:25.684 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 03:12:25.684 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:25.684 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:25.684 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 03:12:25.684 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 03:12:25.684 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:25.684 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:12:25.694 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:25.694 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:12:25.814 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:25.814 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:25.814 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:25.924 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:25.924 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:25.924 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:25.934 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:25.934 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) start.
17-03-18 03:12:25.934 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:25.934 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:12:26.004 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:26.014 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:26.014 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 29092 150' command took 2 ms to send, 1320 ms to get response, and 1340 ms overall
17-03-18 03:12:26.014 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133085
17-03-18 03:12:26.014 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13308 mm
17-03-18 03:12:26.014 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:26.014 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 03:12:26.014 -07 000000576 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 03:12:26.014 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:26.014 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29072, sync = True, waitForSettling = False)
17-03-18 03:12:26.014 -07 000000626 INF: Z Motor: Moving to -0.133083 mm, started at -0.132369 mm, distance = -0.71 um
17-03-18 03:12:26.014 -07 000000629 INF: FPGA: Recv YRDPOS 124380
17-03-18 03:12:26.024 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:26.024 -07 000000576 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:26.024 -07 000000576 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:26.024 -07 000000576 INF: Y Motor: Moving 1344 steps-21
17-03-18 03:12:26.024 -07 000000626 INF: FPGA: Xmit ZDACW 29072\n [Z Motor]
17-03-18 03:12:26.024 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:12:26.034 -07 000000626 INF: FPGA: 'ZDACW 29072' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:12:26.034 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:26.034 -07 000000502 INF: FPGA: Recv ZDACR 29072
17-03-18 03:12:26.044 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:26.044 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:26.044 -07 000000626 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:12:26.334 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 574918816, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 03:12:26.334 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:12:26.334 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:26.334 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 03:12:26.334 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:12:26.334 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:26.344 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:26.344 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 523 ms.
17-03-18 03:12:26.344 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:26.354 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 421 ms.
17-03-18 03:12:26.414 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:12:26.414 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:12:26.464 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:26.464 -07 000000424 INF: FPGA: Recv YRDPOS 126081
17-03-18 03:12:26.474 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:26.474 -07 000000576 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:26.474 -07 000000576 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:12:26.474 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-18 03:12:26.554 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:26.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:27.424 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:27.424 -07 000000502 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:12:27.434 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.434 -07 000000576 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:27.454 -07 000000576 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:27.454 -07 000000576 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:12:27.454 -07 000000576 INF: Y Motor: Moved to 61.5635 after 1444 ms (table move)
17-03-18 03:12:27.464 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133083 mm (DAC = 29072)
17-03-18 03:12:27.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.464 -07 000000618 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:12:27.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:27.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.474 -07 000000462 INF: FPGA: Recv ZSGSRD 30004
17-03-18 03:12:27.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.484 -07 000000561 INF: FPGA: Recv ZSGSRD 30004
17-03-18 03:12:27.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.494 -07 000000591 INF: FPGA: Recv ZSGSRD 30020
17-03-18 03:12:27.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.504 -07 000000455 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:12:27.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.514 -07 000000430 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:12:27.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.524 -07 000000461 INF: FPGA: Recv ZSGSRD 30006
17-03-18 03:12:27.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.534 -07 000000569 INF: FPGA: Recv ZSGSRD 29997
17-03-18 03:12:27.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.544 -07 000000591 INF: FPGA: Recv ZSGSRD 30013
17-03-18 03:12:27.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.554 -07 000000579 INF: FPGA: Recv ZSGSRD 30003
17-03-18 03:12:27.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.564 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:27.564 -07 000000626 INF: FPGA: Recv ZPIEZORD 25507
17-03-18 03:12:27.574 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.574 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.436 V. Piezo Error = -9.9 V.
17-03-18 03:12:27.574 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30006 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30006 (-132.3 uncal um), StdDev = 6 (0.0 uncal um), Range = 23 (0.1 uncal um), Min = 29997 (-132.2 uncal um), Max = 30020 (-132.4 uncal um), Pos Noise = 14 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:12:27.574 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30006, posNoise = 14, negNoise = 9
17-03-18 03:12:27.574 -07 000000610 INF: Z Motor: After move to -0.133083, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:27.574 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 109 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:12:27.574 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:27.624 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 03:12:27.624 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:27.624 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.133088261536814. ----------
17-03-18 03:12:27.624 -07 000000610 INF: Cycle	109	Tile	3	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:27.624 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28896, sync = True, waitForSettling = True)
17-03-18 03:12:27.624 -07 000000610 INF: Z Motor: Moving to -0.132277 mm, started at -0.133088 mm, distance = 0.81 um
17-03-18 03:12:27.624 -07 000000610 INF: FPGA: Xmit ZDACW 28896\n [Z Motor]
17-03-18 03:12:27.624 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 03:12:27.634 -07 000000610 INF: FPGA: 'ZDACW 28896' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:27.634 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:27.634 -07 000000430 INF: FPGA: Recv ZDACR 28896
17-03-18 03:12:27.644 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.644 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:27.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.794 -07 000000606 INF: FPGA: Recv ZSGSRD 29885
17-03-18 03:12:27.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:27.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.804 -07 000000579 INF: FPGA: Recv ZSGSRD 29883
17-03-18 03:12:27.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.814 -07 000000502 INF: FPGA: Recv ZSGSRD 29879
17-03-18 03:12:27.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.824 -07 000000455 INF: FPGA: Recv ZSGSRD 29883
17-03-18 03:12:27.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.834 -07 000000626 INF: FPGA: Recv ZSGSRD 29879
17-03-18 03:12:27.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.844 -07 000000618 INF: FPGA: Recv ZSGSRD 29876
17-03-18 03:12:27.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:27.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.854 -07 000000461 INF: FPGA: Recv ZSGSRD 29879
17-03-18 03:12:27.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.864 -07 000000501 INF: FPGA: Recv ZSGSRD 29889
17-03-18 03:12:27.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.874 -07 000000590 INF: FPGA: Recv ZSGSRD 29883
17-03-18 03:12:27.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:27.884 -07 000000579 INF: FPGA: Recv ZSGSRD 29882
17-03-18 03:12:27.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.894 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:27.894 -07 000000561 INF: FPGA: Recv ZPIEZORD 25341
17-03-18 03:12:27.904 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:27.904 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.409 V. Piezo Error = -10.0 V.
17-03-18 03:12:27.904 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29882 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29882 (-131.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29876 (-131.5 uncal um), Max = 29889 (-131.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:12:27.904 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29882, posNoise = 7, negNoise = 6
17-03-18 03:12:27.904 -07 000000610 INF: Z Motor: After move to -0.132277, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:27.904 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:12:27.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:27.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:27.904 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:27.904 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:27.904 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:27.904 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:27.904 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:27.904 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:27.904 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:27.904 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:27.904 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:27.904 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:27.904 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:27.904 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:27.914 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:27.914 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:27.924 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:12:27.924 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:27.924 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:27.924 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:27.924 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 29072 150\n [Camera]
17-03-18 03:12:28.124 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:28.534 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:28.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:28.534 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:28.534 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:28.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:28.534 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:28.534 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:28.534 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:12:28.534 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:28.534 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:12:28.724 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29072 787
17-03-18 03:12:28.874 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:28.904 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:12:28.904 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:12:28.904 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:28.914 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:12:28.914 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:12:28.914 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:28.914 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:28.914 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:12:28.914 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:28.924 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:12:29.064 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:29.064 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:29.074 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:29.074 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:29.074 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:12:29.074 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:29.074 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:29.074 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:29.194 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:29.194 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:12:29.254 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:29.254 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:29.254 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 29072 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:12:29.264 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132678
17-03-18 03:12:29.264 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13268 mm
17-03-18 03:12:29.264 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:29.264 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 03:12:29.264 -07 000000444 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm
17-03-18 03:12:29.264 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 28984, sync = True, waitForSettling = False)
17-03-18 03:12:29.264 -07 000000430 INF: Z Motor: Moving to -0.132680 mm, started at -0.132292 mm, distance = -0.39 um
17-03-18 03:12:29.274 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:29.274 -07 000000606 INF: FPGA: Recv YRDPOS 126082
17-03-18 03:12:29.284 -07 000000430 INF: FPGA: Xmit ZDACW 28984\n [Z Motor]
17-03-18 03:12:29.284 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:12:29.284 -07 000000444 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:29.284 -07 000000444 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:29.284 -07 000000444 INF: Y Motor: Moving 1343 steps-20
17-03-18 03:12:29.284 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:12:29.294 -07 000000430 INF: FPGA: 'ZDACW 28984' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:12:29.304 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:29.314 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:29.314 -07 000000590 INF: FPGA: Recv ZDACR 28984
17-03-18 03:12:29.324 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:12:29.324 -07 000000430 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet))
17-03-18 03:12:29.454 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:12:29.454 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:12:29.454 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:29.454 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:29.454 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:12:29.574 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:12:29.574 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:12:29.574 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:29.574 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 03:12:29.574 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 506 ms.
17-03-18 03:12:29.674 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 03:12:29.674 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:12:29.724 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:29.734 -07 000000590 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:12:29.734 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:12:29.734 -07 000000444 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:29.734 -07 000000444 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:12:29.734 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.114 mm/sec
17-03-18 03:12:30.004 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.985358,
17-03-18 03:12:30.684 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:30.684 -07 000000626 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:12:30.694 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.694 -07 000000444 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:30.714 -07 000000444 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:30.714 -07 000000444 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:30.714 -07 000000444 INF: Y Motor: Moved to 62.3950 after 1455 ms (table move)
17-03-18 03:12:30.724 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132680 mm (DAC = 28984)
17-03-18 03:12:30.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.724 -07 000000590 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:12:30.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:30.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.734 -07 000000502 INF: FPGA: Recv ZSGSRD 29951
17-03-18 03:12:30.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.744 -07 000000467 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:12:30.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.754 -07 000000629 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:12:30.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.764 -07 000000462 INF: FPGA: Recv ZSGSRD 29942
17-03-18 03:12:30.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.774 -07 000000590 INF: FPGA: Recv ZSGSRD 29938
17-03-18 03:12:30.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.784 -07 000000502 INF: FPGA: Recv ZSGSRD 29945
17-03-18 03:12:30.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.794 -07 000000591 INF: FPGA: Recv ZSGSRD 29936
17-03-18 03:12:30.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.804 -07 000000561 INF: FPGA: Recv ZSGSRD 29941
17-03-18 03:12:30.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:30.814 -07 000000501 INF: FPGA: Recv ZSGSRD 29956
17-03-18 03:12:30.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.824 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:30.824 -07 000000512 INF: FPGA: Recv ZPIEZORD 25461
17-03-18 03:12:30.834 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.834 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -9.8 V.
17-03-18 03:12:30.834 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29944 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29944 (-131.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 29936 (-131.9 uncal um), Max = 29956 (-132.0 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:12:30.834 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29944, posNoise = 12, negNoise = 8
17-03-18 03:12:30.834 -07 000000610 INF: Z Motor: After move to -0.132680, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:30.834 -07 000000610 INF: Z Motor: Settle wait time = 1458 ms, measure time = 108 ms (allowed 150 ms), total time = 1566 ms
17-03-18 03:12:30.834 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:30.884 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1618 ms
17-03-18 03:12:30.884 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:30.884 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.132689960384025. ----------
17-03-18 03:12:30.884 -07 000000610 INF: Cycle	109	Tile	4	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:30.884 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28807, sync = True, waitForSettling = True)
17-03-18 03:12:30.884 -07 000000610 INF: Z Motor: Moving to -0.131870 mm, started at -0.132690 mm, distance = 0.82 um
17-03-18 03:12:30.884 -07 000000610 INF: FPGA: Xmit ZDACW 28807\n [Z Motor]
17-03-18 03:12:30.884 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:12:30.894 -07 000000610 INF: FPGA: 'ZDACW 28807' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:30.894 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:30.894 -07 000000606 INF: FPGA: Recv ZDACR 28807
17-03-18 03:12:30.904 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:30.904 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:31.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.054 -07 000000502 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:12:31.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:31.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.064 -07 000000591 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:12:31.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.074 -07 000000561 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:12:31.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.084 -07 000000626 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:12:31.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:31.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.094 -07 000000462 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:12:31.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.104 -07 000000512 INF: FPGA: Recv ZSGSRD 29817
17-03-18 03:12:31.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.114 -07 000000576 INF: FPGA: Recv ZSGSRD 29818
17-03-18 03:12:31.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.124 -07 000000606 INF: FPGA: Recv ZSGSRD 29813
17-03-18 03:12:31.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.134 -07 000000569 INF: FPGA: Recv ZSGSRD 29820
17-03-18 03:12:31.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:31.144 -07 000000590 INF: FPGA: Recv ZSGSRD 29821
17-03-18 03:12:31.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:31.154 -07 000000629 INF: FPGA: Recv ZPIEZORD 25277
17-03-18 03:12:31.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:31.164 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -10.0 V.
17-03-18 03:12:31.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29819 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29820 (-131.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29813 (-131.1 uncal um), Max = 29821 (-131.1 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:12:31.164 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29819, posNoise = 2, negNoise = 6
17-03-18 03:12:31.164 -07 000000610 INF: Z Motor: After move to -0.131870, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:31.164 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:12:31.164 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:31.164 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:31.164 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:31.164 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:31.164 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:31.164 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:31.164 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:31.164 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:31.164 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:31.164 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:31.164 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:31.164 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:31.174 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:12:31.174 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:31.174 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:12:31.174 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:31.184 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:12:31.184 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:12:31.184 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:12:31.184 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:12:31.194 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28984 150\n [Camera]
17-03-18 03:12:31.394 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:31.554 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:31.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:31.794 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:31.794 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:31.794 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:31.794 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:31.794 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:31.794 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:31.794 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:31.794 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:12:31.804 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:31.804 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:12:31.984 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28984 787
17-03-18 03:12:32.134 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:32.164 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 368 ms.
17-03-18 03:12:32.164 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-18 03:12:32.174 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:32.174 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:12:32.174 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:12:32.174 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:32.174 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:32.174 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:32.174 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:12:32.184 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:12:32.324 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:32.324 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:32.324 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:32.334 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:32.334 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:32.334 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:32.334 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:32.334 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:12:32.334 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:32.334 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:12:32.514 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:32.524 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:32.524 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28984 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:12:32.524 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132521
17-03-18 03:12:32.524 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13252 mm
17-03-18 03:12:32.524 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:32.534 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 03:12:32.534 -07 000000467 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 03:12:32.534 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:32.534 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 28949, sync = True, waitForSettling = False)
17-03-18 03:12:32.534 -07 000000424 INF: Z Motor: Moving to -0.132520 mm, started at -0.131887 mm, distance = -0.63 um
17-03-18 03:12:32.534 -07 000000430 INF: FPGA: Recv YRDPOS 127785
17-03-18 03:12:32.544 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:32.544 -07 000000467 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:32.544 -07 000000467 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:32.544 -07 000000467 INF: Y Motor: Moving 1340 steps-16
17-03-18 03:12:32.544 -07 000000424 INF: FPGA: Xmit ZDACW 28949\n [Z Motor]
17-03-18 03:12:32.544 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:12:32.554 -07 000000424 INF: FPGA: 'ZDACW 28949' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 03:12:32.554 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:32.564 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:32.564 -07 000000590 INF: FPGA: Recv ZDACR 28949
17-03-18 03:12:32.574 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:32.574 -07 000000424 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 03:12:32.714 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:12:32.714 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:12:32.714 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:32.714 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:12:32.714 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 03:12:32.714 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:32.724 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:32.724 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:12:32.724 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:32.734 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:12:32.924 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 03:12:32.924 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:12:32.974 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:32.974 -07 000000579 INF: FPGA: Recv YRDPOS 129481
17-03-18 03:12:32.984 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:32.984 -07 000000467 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:32.984 -07 000000467 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:12:32.984 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.159 mm/sec
17-03-18 03:12:33.934 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:33.934 -07 000000424 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:12:33.944 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:33.944 -07 000000467 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:33.964 -07 000000467 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:33.964 -07 000000467 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:12:33.964 -07 000000467 INF: Y Motor: Moved to 63.2236 after 1438 ms (table move)
17-03-18 03:12:33.974 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132520 mm (DAC = 28949)
17-03-18 03:12:33.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:33.974 -07 000000430 INF: FPGA: Recv ZSGSRD 29917
17-03-18 03:12:33.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:33.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:33.984 -07 000000561 INF: FPGA: Recv ZSGSRD 29916
17-03-18 03:12:33.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:33.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:33.994 -07 000000462 INF: FPGA: Recv ZSGSRD 29916
17-03-18 03:12:34.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.004 -07 000000424 INF: FPGA: Recv ZSGSRD 29925
17-03-18 03:12:34.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.014 -07 000000606 INF: FPGA: Recv ZSGSRD 29923
17-03-18 03:12:34.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.024 -07 000000501 INF: FPGA: Recv ZSGSRD 29922
17-03-18 03:12:34.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.034 -07 000000455 INF: FPGA: Recv ZSGSRD 29917
17-03-18 03:12:34.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.044 -07 000000502 INF: FPGA: Recv ZSGSRD 29914
17-03-18 03:12:34.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.054 -07 000000626 INF: FPGA: Recv ZSGSRD 29920
17-03-18 03:12:34.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.064 -07 000000561 INF: FPGA: Recv ZSGSRD 29915
17-03-18 03:12:34.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.074 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:34.074 -07 000000579 INF: FPGA: Recv ZPIEZORD 25458
17-03-18 03:12:34.084 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.084 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.417 V. Piezo Error = -9.8 V.
17-03-18 03:12:34.084 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29918 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29917 (-131.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29914 (-131.7 uncal um), Max = 29925 (-131.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:12:34.084 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29918, posNoise = 7, negNoise = 4
17-03-18 03:12:34.084 -07 000000610 INF: Z Motor: After move to -0.132520, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:34.084 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 110 ms (allowed 150 ms), total time = 1549 ms
17-03-18 03:12:34.084 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:34.124 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 03:12:34.124 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:34.124 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.132522930868339. ----------
17-03-18 03:12:34.124 -07 000000610 INF: Cycle	109	Tile	5	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:34.124 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28772, sync = True, waitForSettling = True)
17-03-18 03:12:34.124 -07 000000610 INF: Z Motor: Moving to -0.131710 mm, started at -0.132523 mm, distance = 0.81 um
17-03-18 03:12:34.124 -07 000000610 INF: FPGA: Xmit ZDACW 28772\n [Z Motor]
17-03-18 03:12:34.124 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:12:34.134 -07 000000610 INF: FPGA: 'ZDACW 28772' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:34.134 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:34.134 -07 000000462 INF: FPGA: Recv ZDACR 28772
17-03-18 03:12:34.144 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.144 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:34.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.294 -07 000000591 INF: FPGA: Recv ZSGSRD 29795
17-03-18 03:12:34.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.304 -07 000000502 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:12:34.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.314 -07 000000501 INF: FPGA: Recv ZSGSRD 29790
17-03-18 03:12:34.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.324 -07 000000561 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:12:34.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.334 -07 000000579 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:12:34.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.344 -07 000000430 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:12:34.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.364 -07 000000561 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:12:34.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:34.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.374 -07 000000455 INF: FPGA: Recv ZSGSRD 29793
17-03-18 03:12:34.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.384 -07 000000626 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:12:34.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:34.394 -07 000000430 INF: FPGA: Recv ZSGSRD 29798
17-03-18 03:12:34.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.404 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:34.404 -07 000000502 INF: FPGA: Recv ZPIEZORD 25323
17-03-18 03:12:34.414 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:34.414 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -9.8 V.
17-03-18 03:12:34.414 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29795 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29796 (-131.0 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29790 (-130.9 uncal um), Max = 29798 (-131.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:12:34.414 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29795, posNoise = 3, negNoise = 5
17-03-18 03:12:34.414 -07 000000610 INF: Z Motor: After move to -0.131710, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:34.414 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 03:12:34.414 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:34.414 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:34.414 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:34.414 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:34.414 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:34.414 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:34.414 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:34.414 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:34.414 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:34.414 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:34.414 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:12:34.414 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:34.414 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:34.424 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:34.424 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:34.424 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:34.434 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 03:12:34.434 -07 000000590 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:12:34.434 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:34.434 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:34.434 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28949 150\n [Camera]
17-03-18 03:12:34.634 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:35.044 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:35.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:35.044 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:35.044 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:35.044 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:12:35.044 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:35.044 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:35.044 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:35.044 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:35.044 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:12:35.234 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28949 787
17-03-18 03:12:35.364 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.994908,
17-03-18 03:12:35.384 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:35.434 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 03:12:35.434 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:12:35.434 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:35.444 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 03:12:35.444 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:12:35.444 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:35.444 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:35.444 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:12:35.444 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:35.454 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 03:12:35.574 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:35.574 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:35.574 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:35.574 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:35.574 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:12:35.574 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:35.574 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:35.584 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:35.584 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:35.584 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:12:35.774 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:35.774 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:35.774 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28949 150' command took 2 ms to send, 1320 ms to get response, and 1332 ms overall
17-03-18 03:12:35.774 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:12:35.774 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 6 at Y-position 63.2236328125, Z-Position -0.131732752774903. ------
17-03-18 03:12:35.774 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13814 mm
17-03-18 03:12:35.774 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:35.774 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:35.784 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 03:12:35.784 -07 000000461 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 03:12:35.784 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:35.784 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:35.784 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:35.784 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 30176, sync = True, waitForSettling = False)
17-03-18 03:12:35.784 -07 000000561 INF: Z Motor: Moving to -0.138137 mm, started at -0.131733 mm, distance = -6.40 um
17-03-18 03:12:35.784 -07 000000590 INF: FPGA: Recv YRDPOS 129482
17-03-18 03:12:35.794 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:35.794 -07 000000461 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:35.794 -07 000000461 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:35.794 -07 000000461 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:12:35.794 -07 000000561 INF: FPGA: Xmit ZDACW 30176\n [Z Motor]
17-03-18 03:12:35.794 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:12:35.804 -07 000000561 INF: FPGA: 'ZDACW 30176' command took 1 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:12:35.804 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:12:35.814 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:35.824 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:35.824 -07 000000626 INF: FPGA: Recv ZDACR 30176
17-03-18 03:12:35.834 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:12:35.834 -07 000000561 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 03:12:35.954 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:12:35.954 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:12:35.954 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:35.954 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:12:35.954 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:12:35.954 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:35.964 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:35.964 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:35.964 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:12:35.964 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:12:36.004 -07 000000629 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:12:36.004 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 221 ms overall
17-03-18 03:12:36.184 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-18 03:12:36.184 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:12:36.234 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:36.234 -07 000000629 INF: FPGA: Recv YRDPOS 131187
17-03-18 03:12:36.244 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:36.244 -07 000000461 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:36.244 -07 000000461 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-18 03:12:36.244 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.113 mm/sec
17-03-18 03:12:36.554 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:36.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:37.194 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:37.194 -07 000000591 INF: FPGA: Recv YRDPOS 131187
17-03-18 03:12:37.204 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.204 -07 000000461 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:37.234 -07 000000461 INF: Y Motor: After move to 64.062607, error = -0.006454, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:37.234 -07 000000461 INF: Y Motor: Position error after settling (table move) = -13 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:37.234 -07 000000461 INF: Y Motor: Moved to 64.0562 after 1456 ms (table move)
17-03-18 03:12:37.244 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138137 mm (DAC = 30176)
17-03-18 03:12:37.244 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.244 -07 000000501 INF: FPGA: Recv ZSGSRD 30793
17-03-18 03:12:37.254 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:37.254 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.254 -07 000000626 INF: FPGA: Recv ZSGSRD 30788
17-03-18 03:12:37.264 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.264 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.264 -07 000000424 INF: FPGA: Recv ZSGSRD 30805
17-03-18 03:12:37.274 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.274 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.274 -07 000000512 INF: FPGA: Recv ZSGSRD 30794
17-03-18 03:12:37.284 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.284 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.284 -07 000000455 INF: FPGA: Recv ZSGSRD 30786
17-03-18 03:12:37.294 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.294 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.294 -07 000000512 INF: FPGA: Recv ZSGSRD 30792
17-03-18 03:12:37.304 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.304 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.304 -07 000000461 INF: FPGA: Recv ZSGSRD 30794
17-03-18 03:12:37.314 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.314 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.314 -07 000000462 INF: FPGA: Recv ZSGSRD 30795
17-03-18 03:12:37.324 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.324 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.324 -07 000000591 INF: FPGA: Recv ZSGSRD 30796
17-03-18 03:12:37.334 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.334 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:37.334 -07 000000424 INF: FPGA: Recv ZSGSRD 30793
17-03-18 03:12:37.344 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.344 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:37.344 -07 000000579 INF: FPGA: Recv ZPIEZORD 26553
17-03-18 03:12:37.354 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:37.354 -07 000000502 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 46.0 V, since DAC is at 4.605 V. Piezo Error = -9.3 V.
17-03-18 03:12:37.354 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.1 um, Read 10 ADC samples: Avg = 30794 (-137.4 uncal um), Error = 0.8 uncal um, Median = 30794 (-137.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30786 (-137.3 uncal um), Max = 30805 (-137.4 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:12:37.354 -07 000000502 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30794, posNoise = 11, negNoise = 8
17-03-18 03:12:37.354 -07 000000502 INF: Z Motor: After move to -0.138137, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:37.354 -07 000000502 INF: Z Motor: Settle wait time = 1461 ms, measure time = 107 ms (allowed 150 ms), total time = 1568 ms
17-03-18 03:12:37.354 -07 000000502 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:37.404 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1622 ms
17-03-18 03:12:37.404 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:37.404 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:37.404 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:37.404 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:37.404 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:37.404 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:12:37.404 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:37.404 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:12:37.404 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:12:37.414 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:37.414 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:12:37.424 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:12:37.424 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:12:37.424 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:12:37.474 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:12:37.774 -07 000000606 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:12:37.774 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:12:37.774 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:12:37.894 -07 000000462 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:12:37.894 -07 000000462 INF: FPGA: Recv CAMSNAP
17-03-18 03:12:37.894 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1165594328, 0x0, 559484976) start.
17-03-18 03:12:37.894 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 465 ms to get response, and 468 ms overall
17-03-18 03:12:38.014 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1165594328, 0x0, 559484976) end. Duration was 122 ms.
17-03-18 03:12:38.014 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:38.014 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:12:38.014 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 246 ms.
17-03-18 03:12:38.094 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:38.094 -07 000000455 INF: Autofocus start
17-03-18 03:12:38.094 -07 000000455 INF: MeasureProfile start
17-03-18 03:12:38.094 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:38.104 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:38.104 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:12:38.104 -07 000000455 INF: MeasureProfile done
17-03-18 03:12:38.104 -07 000000455 INF: X=3  Z correction [um]=-0.009517147
17-03-18 03:12:38.104 -07 000000455 INF: Autofocus finished
17-03-18 03:12:38.304 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:12:38.304 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:12:38.304 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05615234375, Z-position -0.138150540704522. ----------
17-03-18 03:12:38.304 -07 000000610 INF: Cycle	109	Tile	6	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:38.314 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28687, sync = True, waitForSettling = True)
17-03-18 03:12:38.314 -07 000000610 INF: Z Motor: Moving to -0.131321 mm, started at -0.138151 mm, distance = 6.83 um
17-03-18 03:12:38.314 -07 000000610 INF: FPGA: Xmit ZDACW 28687\n [Z Motor]
17-03-18 03:12:38.314 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 03:12:38.324 -07 000000610 INF: FPGA: 'ZDACW 28687' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.324 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:38.324 -07 000000579 INF: FPGA: Recv ZDACR 28687
17-03-18 03:12:38.334 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.334 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:38.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.484 -07 000000512 INF: FPGA: Recv ZSGSRD 29733
17-03-18 03:12:38.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:38.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.494 -07 000000569 INF: FPGA: Recv ZSGSRD 29731
17-03-18 03:12:38.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.504 -07 000000591 INF: FPGA: Recv ZSGSRD 29735
17-03-18 03:12:38.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.514 -07 000000626 INF: FPGA: Recv ZSGSRD 29728
17-03-18 03:12:38.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.524 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.524 -07 000000579 INF: FPGA: Recv ZSGSRD 29733
17-03-18 03:12:38.534 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.534 -07 000000561 INF: FPGA: Recv ZSGSRD 29733
17-03-18 03:12:38.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.544 -07 000000461 INF: FPGA: Recv ZSGSRD 29728
17-03-18 03:12:38.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.554 -07 000000430 INF: FPGA: Recv ZSGSRD 29726
17-03-18 03:12:38.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.564 -07 000000467 INF: FPGA: Recv ZSGSRD 29726
17-03-18 03:12:38.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:38.574 -07 000000569 INF: FPGA: Recv ZSGSRD 29738
17-03-18 03:12:38.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.584 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:38.584 -07 000000606 INF: FPGA: Recv ZPIEZORD 25201
17-03-18 03:12:38.594 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:38.594 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.377 V. Piezo Error = -9.9 V.
17-03-18 03:12:38.594 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29731 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29732 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29726 (-130.5 uncal um), Max = 29738 (-130.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:12:38.594 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29731, posNoise = 7, negNoise = 5
17-03-18 03:12:38.594 -07 000000610 INF: Z Motor: After move to -0.131321, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:38.594 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 03:12:38.594 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:38.594 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:38.594 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:38.594 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:38.594 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:38.594 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:38.594 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:38.594 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:38.594 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:38.594 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:38.594 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:38.594 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:38.594 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:12:38.594 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:38.604 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:38.604 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:38.614 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:38.614 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:38.614 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:12:38.614 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:38.614 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28864 150\n [Camera]
17-03-18 03:12:38.814 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:39.224 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:39.224 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:39.224 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:39.224 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:39.224 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:39.224 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:39.224 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:39.224 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:12:39.234 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:39.234 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:12:39.414 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28864 787
17-03-18 03:12:39.564 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:39.604 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 03:12:39.604 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:12:39.604 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:39.604 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 03:12:39.604 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:12:39.604 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:39.604 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:39.604 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:12:39.604 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:39.614 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:12:39.754 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:39.754 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:39.754 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:39.764 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:39.764 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:39.764 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:39.764 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:12:39.764 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:39.764 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:39.764 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:12:39.944 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:39.944 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:39.944 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28864 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:12:39.954 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131932
17-03-18 03:12:39.954 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13193 mm
17-03-18 03:12:39.954 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:40.064 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 28821, sync = True, waitForSettling = False)
17-03-18 03:12:40.064 -07 000000467 INF: Z Motor: Moving to -0.131934 mm, started at -0.131322 mm, distance = -0.61 um
17-03-18 03:12:40.064 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 03:12:40.064 -07 000000455 INF: Y Motor: Moving to 64.8926 mm, started at 64.0562 mm, delta = 0.8365 mm
17-03-18 03:12:40.074 -07 000000467 INF: FPGA: Xmit ZDACW 28821\n [Z Motor]
17-03-18 03:12:40.074 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:12:40.084 -07 000000467 INF: FPGA: 'ZDACW 28821' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:12:40.094 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:40.094 -07 000000430 INF: FPGA: Recv YRDPOS 131188
17-03-18 03:12:40.104 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:40.104 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 31 ms overall
17-03-18 03:12:40.104 -07 000000455 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:40.104 -07 000000502 INF: FPGA: Recv ZDACR 28821
17-03-18 03:12:40.104 -07 000000455 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:40.104 -07 000000455 INF: Y Motor: Moving 1338 steps-13
17-03-18 03:12:40.114 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:12:40.114 -07 000000467 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-18 03:12:40.124 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:40.144 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 03:12:40.144 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 03:12:40.144 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:40.144 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:40.154 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 03:12:40.154 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:12:40.154 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:40.154 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:12:40.154 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:40.154 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:12:40.494 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:12:40.494 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-18 03:12:40.544 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:40.544 -07 000000467 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:12:40.554 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:40.554 -07 000000455 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:40.554 -07 000000455 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:12:40.554 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.836 mm, average velocity = 2.134 mm/sec
17-03-18 03:12:40.724 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.007176,
17-03-18 03:12:41.504 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:41.504 -07 000000629 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:12:41.514 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.514 -07 000000455 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:41.534 -07 000000455 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:41.534 -07 000000455 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:41.534 -07 000000455 INF: Y Motor: Moved to 64.8784 after 1471 ms (table move)
17-03-18 03:12:41.544 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131934 mm (DAC = 28821)
17-03-18 03:12:41.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.544 -07 000000590 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:12:41.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:41.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.554 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:41.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:41.554 -07 000000502 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:12:41.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.564 -07 000000569 INF: FPGA: Recv ZSGSRD 29831
17-03-18 03:12:41.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.574 -07 000000626 INF: FPGA: Recv ZSGSRD 29832
17-03-18 03:12:41.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.584 -07 000000512 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:12:41.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.594 -07 000000462 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:12:41.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.604 -07 000000606 INF: FPGA: Recv ZSGSRD 29824
17-03-18 03:12:41.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.614 -07 000000561 INF: FPGA: Recv ZSGSRD 29819
17-03-18 03:12:41.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.624 -07 000000455 INF: FPGA: Recv ZSGSRD 29825
17-03-18 03:12:41.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.634 -07 000000590 INF: FPGA: Recv ZSGSRD 29828
17-03-18 03:12:41.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:41.644 -07 000000461 INF: FPGA: Recv ZPIEZORD 25365
17-03-18 03:12:41.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.654 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.398 V. Piezo Error = -9.8 V.
17-03-18 03:12:41.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29826 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29826 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29819 (-131.1 uncal um), Max = 29832 (-131.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:12:41.654 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29826, posNoise = 6, negNoise = 7
17-03-18 03:12:41.654 -07 000000610 INF: Z Motor: After move to -0.131934, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:41.654 -07 000000610 INF: Z Motor: Settle wait time = 1474 ms, measure time = 108 ms (allowed 150 ms), total time = 1582 ms
17-03-18 03:12:41.654 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:41.704 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1748 ms
17-03-18 03:12:41.704 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:41.704 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.131931903351297. ----------
17-03-18 03:12:41.704 -07 000000610 INF: Cycle	109	Tile	7	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:41.704 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28644, sync = True, waitForSettling = True)
17-03-18 03:12:41.704 -07 000000610 INF: Z Motor: Moving to -0.131124 mm, started at -0.131932 mm, distance = 0.81 um
17-03-18 03:12:41.704 -07 000000610 INF: FPGA: Xmit ZDACW 28644\n [Z Motor]
17-03-18 03:12:41.704 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 03:12:41.714 -07 000000610 INF: FPGA: 'ZDACW 28644' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:41.714 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:41.714 -07 000000591 INF: FPGA: Recv ZDACR 28644
17-03-18 03:12:41.724 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.724 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:41.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.874 -07 000000467 INF: FPGA: Recv ZSGSRD 29700
17-03-18 03:12:41.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.884 -07 000000618 INF: FPGA: Recv ZSGSRD 29710
17-03-18 03:12:41.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.894 -07 000000455 INF: FPGA: Recv ZSGSRD 29701
17-03-18 03:12:41.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.904 -07 000000501 INF: FPGA: Recv ZSGSRD 29707
17-03-18 03:12:41.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:41.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.914 -07 000000579 INF: FPGA: Recv ZSGSRD 29700
17-03-18 03:12:41.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.924 -07 000000462 INF: FPGA: Recv ZSGSRD 29697
17-03-18 03:12:41.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.934 -07 000000569 INF: FPGA: Recv ZSGSRD 29703
17-03-18 03:12:41.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.944 -07 000000591 INF: FPGA: Recv ZSGSRD 29699
17-03-18 03:12:41.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.954 -07 000000626 INF: FPGA: Recv ZSGSRD 29701
17-03-18 03:12:41.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:41.964 -07 000000576 INF: FPGA: Recv ZSGSRD 29709
17-03-18 03:12:41.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.974 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:41.974 -07 000000606 INF: FPGA: Recv ZPIEZORD 25191
17-03-18 03:12:41.984 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:41.984 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.371 V. Piezo Error = -9.9 V.
17-03-18 03:12:41.984 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29703 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29701 (-130.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29697 (-130.3 uncal um), Max = 29710 (-130.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:12:41.984 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29703, posNoise = 7, negNoise = 6
17-03-18 03:12:41.984 -07 000000610 INF: Z Motor: After move to -0.131124, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:41.984 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:12:41.984 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:41.984 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:41.984 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:41.984 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:41.984 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:41.984 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:41.984 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:41.984 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:41.984 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:41.984 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:41.984 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:41.984 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:41.984 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:41.984 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:41.984 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:41.984 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:41.994 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 03:12:41.994 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:12:42.004 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 03:12:42.004 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:12:42.004 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28821 150\n [Camera]
17-03-18 03:12:42.204 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:42.604 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:42.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:42.604 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:42.604 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:42.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:42.604 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:42.614 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:42.614 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:12:42.614 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:42.614 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:12:42.794 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28821 787
17-03-18 03:12:42.944 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:42.994 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:12:42.994 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:12:42.994 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:42.994 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:12:42.994 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:12:42.994 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:42.994 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:42.994 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:12:42.994 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:43.004 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:12:43.144 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:43.144 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:43.144 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:43.144 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:43.144 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 03:12:43.144 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:43.144 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:43.144 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:43.144 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:43.144 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 03:12:43.334 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:43.334 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:43.334 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28821 150' command took 2 ms to send, 1323 ms to get response, and 1329 ms overall
17-03-18 03:12:43.334 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131759
17-03-18 03:12:43.334 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13176 mm
17-03-18 03:12:43.334 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:43.334 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 03:12:43.334 -07 000000461 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 03:12:43.334 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:43.334 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28783, sync = True, waitForSettling = False)
17-03-18 03:12:43.334 -07 000000606 INF: Z Motor: Moving to -0.131760 mm, started at -0.131142 mm, distance = -0.62 um
17-03-18 03:12:43.344 -07 000000606 INF: FPGA: Xmit ZDACW 28783\n [Z Motor]
17-03-18 03:12:43.344 -07 000000561 INF: FPGA: Recv YRDPOS 132871
17-03-18 03:12:43.344 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 03:12:43.344 -07 000000461 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:43.344 -07 000000461 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:43.344 -07 000000461 INF: Y Motor: Moving 1351 steps-29
17-03-18 03:12:43.344 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 03:12:43.354 -07 000000606 INF: FPGA: 'ZDACW 28783' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:43.354 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:43.364 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:43.364 -07 000000430 INF: FPGA: Recv ZDACR 28783
17-03-18 03:12:43.374 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:43.374 -07 000000606 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 03:12:43.524 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:12:43.524 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:12:43.524 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:43.524 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 03:12:43.524 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:12:43.524 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:43.524 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:43.524 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:43.524 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:12:43.534 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:12:43.734 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:12:43.734 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 388 ms overall
17-03-18 03:12:43.774 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:43.784 -07 000000626 INF: FPGA: Recv YRDPOS 134581
17-03-18 03:12:43.784 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:43.784 -07 000000461 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:43.784 -07 000000461 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 03:12:43.784 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.176 mm/sec
17-03-18 03:12:44.734 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:44.734 -07 000000462 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:12:44.744 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:44.744 -07 000000461 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:44.774 -07 000000461 INF: Y Motor: After move to 65.722610, error = -0.008743, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:44.774 -07 000000461 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:12:44.774 -07 000000461 INF: Y Motor: Moved to 65.7139 after 1434 ms (table move)
17-03-18 03:12:44.774 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131760 mm (DAC = 28783)
17-03-18 03:12:44.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.774 -07 000000629 INF: FPGA: Recv ZSGSRD 29803
17-03-18 03:12:44.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:44.784 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.784 -07 000000462 INF: FPGA: Recv ZSGSRD 29797
17-03-18 03:12:44.794 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.794 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.794 -07 000000590 INF: FPGA: Recv ZSGSRD 29794
17-03-18 03:12:44.804 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.804 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.804 -07 000000629 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:12:44.814 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.814 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.814 -07 000000626 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:12:44.824 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.824 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.824 -07 000000618 INF: FPGA: Recv ZSGSRD 29806
17-03-18 03:12:44.834 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.834 -07 000000569 INF: FPGA: Recv ZSGSRD 29806
17-03-18 03:12:44.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.844 -07 000000455 INF: FPGA: Recv ZSGSRD 29807
17-03-18 03:12:44.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.854 -07 000000629 INF: FPGA: Recv ZSGSRD 29795
17-03-18 03:12:44.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:44.864 -07 000000576 INF: FPGA: Recv ZSGSRD 29796
17-03-18 03:12:44.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.874 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:44.874 -07 000000590 INF: FPGA: Recv ZPIEZORD 25315
17-03-18 03:12:44.884 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.884 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.392 V. Piezo Error = -9.8 V.
17-03-18 03:12:44.884 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29800 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29796 (-131.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29794 (-130.9 uncal um), Max = 29807 (-131.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:12:44.884 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29800, posNoise = 7, negNoise = 6
17-03-18 03:12:44.884 -07 000000610 INF: Z Motor: After move to -0.131760, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:44.884 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 106 ms (allowed 150 ms), total time = 1541 ms
17-03-18 03:12:44.884 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:44.934 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 03:12:44.934 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:44.934 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.7138671875, Z-position -0.131764873835612. ----------
17-03-18 03:12:44.934 -07 000000610 INF: Cycle	109	Tile	8	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:44.934 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28606, sync = True, waitForSettling = True)
17-03-18 03:12:44.934 -07 000000610 INF: Z Motor: Moving to -0.130950 mm, started at -0.131765 mm, distance = 0.81 um
17-03-18 03:12:44.934 -07 000000610 INF: FPGA: Xmit ZDACW 28606\n [Z Motor]
17-03-18 03:12:44.934 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:12:44.944 -07 000000610 INF: FPGA: 'ZDACW 28606' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:44.944 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:44.944 -07 000000579 INF: FPGA: Recv ZDACR 28606
17-03-18 03:12:44.954 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:44.954 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:45.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.104 -07 000000569 INF: FPGA: Recv ZSGSRD 29671
17-03-18 03:12:45.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:45.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.114 -07 000000424 INF: FPGA: Recv ZSGSRD 29677
17-03-18 03:12:45.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.124 -07 000000591 INF: FPGA: Recv ZSGSRD 29671
17-03-18 03:12:45.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.134 -07 000000430 INF: FPGA: Recv ZSGSRD 29675
17-03-18 03:12:45.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.144 -07 000000461 INF: FPGA: Recv ZSGSRD 29679
17-03-18 03:12:45.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:45.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.164 -07 000000576 INF: FPGA: Recv ZSGSRD 29678
17-03-18 03:12:45.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:45.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.174 -07 000000618 INF: FPGA: Recv ZSGSRD 29667
17-03-18 03:12:45.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.184 -07 000000626 INF: FPGA: Recv ZSGSRD 29674
17-03-18 03:12:45.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.194 -07 000000561 INF: FPGA: Recv ZSGSRD 29673
17-03-18 03:12:45.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:45.204 -07 000000569 INF: FPGA: Recv ZSGSRD 29674
17-03-18 03:12:45.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.214 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:45.214 -07 000000461 INF: FPGA: Recv ZPIEZORD 25163
17-03-18 03:12:45.224 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:45.224 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.365 V. Piezo Error = -9.9 V.
17-03-18 03:12:45.224 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29674 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29674 (-130.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29667 (-130.1 uncal um), Max = 29679 (-130.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:12:45.224 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29674, posNoise = 5, negNoise = 7
17-03-18 03:12:45.224 -07 000000610 INF: Z Motor: After move to -0.130950, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:45.224 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 03:12:45.224 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:45.224 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:45.224 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:45.224 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:45.224 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:45.224 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:45.224 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:45.224 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:45.224 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:45.224 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:45.224 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:12:45.224 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:45.234 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:45.234 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:45.234 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:45.234 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:45.244 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:12:45.244 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:45.244 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:45.244 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:45.254 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28783 150\n [Camera]
17-03-18 03:12:45.454 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:45.854 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:45.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:45.854 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:45.854 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:45.854 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 03:12:45.854 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:45.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:45.854 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:45.854 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:45.854 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 03:12:46.044 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28783 787
17-03-18 03:12:46.084 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.993549,
17-03-18 03:12:46.194 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:46.234 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 03:12:46.234 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 03:12:46.234 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:46.234 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:12:46.234 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:12:46.234 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:46.234 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:46.234 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:46.234 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:12:46.244 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 03:12:46.384 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:46.384 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:46.394 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:46.394 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:46.394 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 03:12:46.394 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:46.394 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:46.394 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:46.394 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:46.394 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 03:12:46.554 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:46.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:46.584 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:46.584 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:46.584 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28783 150' command took 2 ms to send, 1320 ms to get response, and 1330 ms overall
17-03-18 03:12:46.584 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131285
17-03-18 03:12:46.584 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13128 mm
17-03-18 03:12:46.584 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:46.584 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 03:12:46.584 -07 000000561 INF: Y Motor: Moving to 66.5526 mm, started at 65.7139 mm, delta = 0.8387 mm
17-03-18 03:12:46.584 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:46.584 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28679, sync = True, waitForSettling = False)
17-03-18 03:12:46.584 -07 000000502 INF: Z Motor: Moving to -0.131284 mm, started at -0.130955 mm, distance = -0.33 um
17-03-18 03:12:46.584 -07 000000576 INF: FPGA: Recv YRDPOS 134582
17-03-18 03:12:46.594 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:46.594 -07 000000561 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:46.594 -07 000000561 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:46.594 -07 000000561 INF: Y Motor: Moving 1342 steps-19
17-03-18 03:12:46.594 -07 000000502 INF: FPGA: Xmit ZDACW 28679\n [Z Motor]
17-03-18 03:12:46.594 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:12:46.604 -07 000000502 INF: FPGA: 'ZDACW 28679' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 03:12:46.604 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:46.604 -07 000000626 INF: FPGA: Recv ZDACR 28679
17-03-18 03:12:46.614 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:46.614 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:46.614 -07 000000502 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 03:12:46.764 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 03:12:46.764 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:12:46.764 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:46.774 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 03:12:46.774 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:12:46.774 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:46.774 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:46.774 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:46.774 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:12:46.784 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:12:46.984 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:12:46.984 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:12:47.064 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:47.064 -07 000000512 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:12:47.074 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:47.074 -07 000000561 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:47.074 -07 000000561 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 03:12:47.074 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.107 mm/sec
17-03-18 03:12:48.024 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:48.024 -07 000000629 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:12:48.034 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:48.034 -07 000000561 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:48.064 -07 000000561 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:48.064 -07 000000561 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:48.064 -07 000000561 INF: Y Motor: Moved to 66.5386 after 1475 ms (table move)
17-03-18 03:12:48.064 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131284 mm (DAC = 28679)
17-03-18 03:12:48.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.064 -07 000000590 INF: FPGA: Recv ZSGSRD 29727
17-03-18 03:12:48.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:48.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.074 -07 000000502 INF: FPGA: Recv ZSGSRD 29732
17-03-18 03:12:48.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.084 -07 000000444 INF: FPGA: Recv ZSGSRD 29723
17-03-18 03:12:48.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.094 -07 000000502 INF: FPGA: Recv ZSGSRD 29717
17-03-18 03:12:48.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.104 -07 000000444 INF: FPGA: Recv ZSGSRD 29722
17-03-18 03:12:48.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.114 -07 000000467 INF: FPGA: Recv ZSGSRD 29729
17-03-18 03:12:48.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.124 -07 000000501 INF: FPGA: Recv ZSGSRD 29730
17-03-18 03:12:48.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.134 -07 000000629 INF: FPGA: Recv ZSGSRD 29725
17-03-18 03:12:48.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.144 -07 000000502 INF: FPGA: Recv ZSGSRD 29734
17-03-18 03:12:48.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.154 -07 000000462 INF: FPGA: Recv ZSGSRD 29732
17-03-18 03:12:48.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.164 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:48.164 -07 000000626 INF: FPGA: Recv ZPIEZORD 25246
17-03-18 03:12:48.174 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.174 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.8 V.
17-03-18 03:12:48.174 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29727 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29728 (-130.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29717 (-130.4 uncal um), Max = 29734 (-130.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 03:12:48.174 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29727, posNoise = 7, negNoise = 10
17-03-18 03:12:48.174 -07 000000610 INF: Z Motor: After move to -0.131284, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:48.174 -07 000000610 INF: Z Motor: Settle wait time = 1478 ms, measure time = 107 ms (allowed 150 ms), total time = 1585 ms
17-03-18 03:12:48.174 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:48.224 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1636 ms
17-03-18 03:12:48.224 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:48.224 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.131295906349263. ----------
17-03-18 03:12:48.224 -07 000000610 INF: Cycle	109	Tile	9	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:48.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28502, sync = True, waitForSettling = True)
17-03-18 03:12:48.224 -07 000000610 INF: Z Motor: Moving to -0.130474 mm, started at -0.131296 mm, distance = 0.82 um
17-03-18 03:12:48.224 -07 000000610 INF: FPGA: Xmit ZDACW 28502\n [Z Motor]
17-03-18 03:12:48.224 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:12:48.234 -07 000000610 INF: FPGA: 'ZDACW 28502' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:48.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:48.234 -07 000000590 INF: FPGA: Recv ZDACR 28502
17-03-18 03:12:48.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:48.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.394 -07 000000512 INF: FPGA: Recv ZSGSRD 29598
17-03-18 03:12:48.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:48.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.404 -07 000000444 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:12:48.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 2 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.414 -07 000000626 INF: FPGA: Recv ZSGSRD 29597
17-03-18 03:12:48.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.424 -07 000000461 INF: FPGA: Recv ZSGSRD 29601
17-03-18 03:12:48.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.434 -07 000000502 INF: FPGA: Recv ZSGSRD 29598
17-03-18 03:12:48.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.444 -07 000000629 INF: FPGA: Recv ZSGSRD 29603
17-03-18 03:12:48.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.454 -07 000000606 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:12:48.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.464 -07 000000430 INF: FPGA: Recv ZSGSRD 29599
17-03-18 03:12:48.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.474 -07 000000501 INF: FPGA: Recv ZSGSRD 29608
17-03-18 03:12:48.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:48.484 -07 000000618 INF: FPGA: Recv ZSGSRD 29599
17-03-18 03:12:48.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:48.494 -07 000000576 INF: FPGA: Recv ZPIEZORD 25063
17-03-18 03:12:48.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:48.504 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.349 V. Piezo Error = -10.0 V.
17-03-18 03:12:48.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29601 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29600 (-129.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29597 (-129.7 uncal um), Max = 29608 (-129.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:12:48.504 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29601, posNoise = 7, negNoise = 4
17-03-18 03:12:48.504 -07 000000610 INF: Z Motor: After move to -0.130474, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:48.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:12:48.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:48.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:48.504 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:48.504 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:48.504 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:48.504 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:48.504 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:48.504 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:48.504 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:48.504 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:48.504 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:48.504 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:48.504 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:48.514 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:48.514 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:12:48.514 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:48.524 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:12:48.524 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:48.524 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:12:48.524 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:12:48.524 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28679 150\n [Camera]
17-03-18 03:12:48.724 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:49.134 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:49.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:49.134 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:49.134 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:49.134 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-18 03:12:49.134 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:49.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:49.134 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:49.134 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:49.134 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-18 03:12:49.324 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28679 787
17-03-18 03:12:49.474 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 940
17-03-18 03:12:49.504 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 03:12:49.504 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 03:12:49.504 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:49.514 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:12:49.514 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:12:49.514 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:49.514 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:49.514 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:12:49.514 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:49.524 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 03:12:49.664 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:49.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:49.664 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:49.664 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:49.664 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:12:49.674 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:49.674 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:49.674 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:49.674 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:49.674 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:12:49.854 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:49.864 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:49.864 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28679 150' command took 2 ms to send, 1321 ms to get response, and 1331 ms overall
17-03-18 03:12:49.864 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:12:49.864 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 10 at Y-position 66.53857421875, Z-Position -0.130486455619401. ------
17-03-18 03:12:49.864 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:49.864 -07 000000461 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13740 mm
17-03-18 03:12:49.864 -07 000000461 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:49.874 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 30015, sync = True, waitForSettling = False)
17-03-18 03:12:49.874 -07 000000467 INF: Z Motor: Moving to -0.137400 mm, started at -0.130486 mm, distance = -6.91 um
17-03-18 03:12:49.874 -07 000000467 INF: FPGA: Xmit ZDACW 30015\n [Z Motor]
17-03-18 03:12:49.874 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 03:12:49.874 -07 000000590 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-18 03:12:49.874 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:49.874 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 5 ms to get response, and 6 ms overall
17-03-18 03:12:49.874 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:12:49.884 -07 000000467 INF: FPGA: 'ZDACW 30015' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:49.884 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:12:49.894 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:49.894 -07 000000424 INF: FPGA: Recv YRDPOS 136271
17-03-18 03:12:49.904 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:49.904 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 03:12:49.904 -07 000000590 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:49.904 -07 000000590 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:49.904 -07 000000590 INF: Y Motor: Moving 1350 steps-29
17-03-18 03:12:49.904 -07 000000626 INF: FPGA: Recv ZDACR 30015
17-03-18 03:12:49.914 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:12:49.914 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:49.914 -07 000000467 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:12:50.044 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 03:12:50.044 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:12:50.044 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:50.044 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:50.054 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 03:12:50.054 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:12:50.054 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:50.054 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:50.054 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 03:12:50.054 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:12:50.084 -07 000000579 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:12:50.084 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 207 ms overall
17-03-18 03:12:50.284 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:12:50.284 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:12:50.334 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:50.334 -07 000000591 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:12:50.344 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:12:50.344 -07 000000590 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:50.344 -07 000000590 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 03:12:50.344 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.181 mm/sec
17-03-18 03:12:51.294 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:51.294 -07 000000579 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:12:51.304 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:51.304 -07 000000590 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:51.324 -07 000000590 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:51.324 -07 000000590 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:51.324 -07 000000590 INF: Y Motor: Moved to 67.3716 after 1455 ms (table move)
17-03-18 03:12:51.334 -07 000000461 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137400 mm (DAC = 30015)
17-03-18 03:12:51.334 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.334 -07 000000629 INF: FPGA: Recv ZSGSRD 30682
17-03-18 03:12:51.344 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:51.344 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.344 -07 000000576 INF: FPGA: Recv ZSGSRD 30681
17-03-18 03:12:51.354 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.354 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.354 -07 000000618 INF: FPGA: Recv ZSGSRD 30680
17-03-18 03:12:51.364 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.364 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.364 -07 000000591 INF: FPGA: Recv ZSGSRD 30675
17-03-18 03:12:51.374 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.374 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.374 -07 000000444 INF: FPGA: Recv ZSGSRD 30677
17-03-18 03:12:51.384 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.384 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.384 -07 000000467 INF: FPGA: Recv ZSGSRD 30675
17-03-18 03:12:51.394 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.394 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.394 -07 000000569 INF: FPGA: Recv ZSGSRD 30680
17-03-18 03:12:51.404 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.404 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.404 -07 000000618 INF: FPGA: Recv ZSGSRD 30683
17-03-18 03:12:51.414 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.414 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.414 -07 000000501 INF: FPGA: Recv ZSGSRD 30676
17-03-18 03:12:51.424 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.424 -07 000000461 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:51.424 -07 000000576 INF: FPGA: Recv ZSGSRD 30683
17-03-18 03:12:51.434 -07 000000461 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:51.444 -07 000000461 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:51.444 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.999021,
17-03-18 03:12:51.444 -07 000000629 INF: FPGA: Recv ZPIEZORD 26514
17-03-18 03:12:51.454 -07 000000461 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:51.454 -07 000000461 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.580 V. Piezo Error = -9.2 V.
17-03-18 03:12:51.454 -07 000000461 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.4 um, Read 10 ADC samples: Avg = 30679 (-136.6 uncal um), Error = 0.8 uncal um, Median = 30680 (-136.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30675 (-136.6 uncal um), Max = 30683 (-136.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:12:51.454 -07 000000461 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30679, posNoise = 4, negNoise = 4
17-03-18 03:12:51.454 -07 000000461 INF: Z Motor: After move to -0.137400, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:51.454 -07 000000461 INF: Z Motor: Settle wait time = 1460 ms, measure time = 119 ms (allowed 150 ms), total time = 1579 ms
17-03-18 03:12:51.454 -07 000000461 INF: Z Motor: Waiting extra 31 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:51.494 -07 000000461 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms
17-03-18 03:12:51.494 -07 000000461 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:51.494 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:51.494 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:51.494 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:51.494 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:51.494 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:12:51.494 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:51.494 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:51.494 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:12:51.504 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:51.504 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:12:51.514 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 03:12:51.514 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 03:12:51.514 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:12:51.554 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:51.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:51.564 -07 000000576 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:12:51.864 -07 000000461 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:12:51.864 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:12:51.864 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:12:51.864 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1165594328, 0x0, 559484976) start.
17-03-18 03:12:51.894 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:12:51.904 -07 000000591 INF: FPGA: Recv CAMSNAP
17-03-18 03:12:51.904 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 03:12:51.984 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1165594328, 0x0, 559484976) end. Duration was 120 ms.
17-03-18 03:12:51.984 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:51.984 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:12:51.984 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 123 ms.
17-03-18 03:12:52.004 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:12:52.004 -07 000000444 INF: Autofocus start
17-03-18 03:12:52.004 -07 000000444 INF: MeasureProfile start
17-03-18 03:12:52.004 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:12:52.014 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:52.014 -07 000000467 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:12:52.014 -07 000000444 INF: MeasureProfile done
17-03-18 03:12:52.014 -07 000000444 INF: X=-16  Z correction [um]=-0.08128808
17-03-18 03:12:52.014 -07 000000444 INF: Autofocus finished
17-03-18 03:12:52.214 -07 000000590 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:12:52.214 -07 000000467 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-18 03:12:52.214 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.137411756308219. ----------
17-03-18 03:12:52.224 -07 000000610 INF: Cycle	109	Tile	10	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:52.224 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28509, sync = True, waitForSettling = True)
17-03-18 03:12:52.224 -07 000000610 INF: Z Motor: Moving to -0.130506 mm, started at -0.137412 mm, distance = 6.91 um
17-03-18 03:12:52.224 -07 000000610 INF: FPGA: Xmit ZDACW 28509\n [Z Motor]
17-03-18 03:12:52.224 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 03:12:52.234 -07 000000610 INF: FPGA: 'ZDACW 28509' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:52.234 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:52.234 -07 000000591 INF: FPGA: Recv ZDACR 28509
17-03-18 03:12:52.244 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:12:52.244 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:52.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.394 -07 000000590 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:12:52.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.404 -07 000000461 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:12:52.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.414 -07 000000462 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:12:52.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.424 -07 000000629 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:12:52.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.434 -07 000000561 INF: FPGA: Recv ZSGSRD 29611
17-03-18 03:12:52.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.444 -07 000000576 INF: FPGA: Recv ZSGSRD 29605
17-03-18 03:12:52.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.454 -07 000000606 INF: FPGA: Recv ZSGSRD 29604
17-03-18 03:12:52.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.464 -07 000000462 INF: FPGA: Recv ZSGSRD 29610
17-03-18 03:12:52.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.474 -07 000000626 INF: FPGA: Recv ZSGSRD 29602
17-03-18 03:12:52.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:52.484 -07 000000561 INF: FPGA: Recv ZSGSRD 29604
17-03-18 03:12:52.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.494 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:52.494 -07 000000590 INF: FPGA: Recv ZPIEZORD 25091
17-03-18 03:12:52.504 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:52.504 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.350 V. Piezo Error = -9.9 V.
17-03-18 03:12:52.504 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29605 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29604 (-129.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29602 (-129.7 uncal um), Max = 29611 (-129.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 03:12:52.504 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29605, posNoise = 6, negNoise = 3
17-03-18 03:12:52.504 -07 000000610 INF: Z Motor: After move to -0.130506, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:52.504 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:12:52.504 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:52.504 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:52.504 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:52.504 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:52.504 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:52.504 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:52.504 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:52.504 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:52.504 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:52.504 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:52.504 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:52.504 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:52.514 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:12:52.514 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:52.514 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:52.514 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:52.524 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:12:52.524 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:12:52.524 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:12:52.524 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 03:12:52.524 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28686 150\n [Camera]
17-03-18 03:12:52.724 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:53.124 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:53.124 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:53.124 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:53.124 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:53.124 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-18 03:12:53.124 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:53.124 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:53.124 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:53.124 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:53.124 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-18 03:12:53.314 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28686 787
17-03-18 03:12:53.464 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:53.504 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 03:12:53.504 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 03:12:53.504 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:53.504 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:12:53.504 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:12:53.504 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:53.504 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:53.504 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:53.514 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:12:53.514 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:12:53.664 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:53.664 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:53.664 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:53.664 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:53.664 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:53.664 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:53.664 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-18 03:12:53.664 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:53.664 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:53.664 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-18 03:12:53.854 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:12:53.854 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:53.854 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28686 150' command took 2 ms to send, 1322 ms to get response, and 1329 ms overall
17-03-18 03:12:53.854 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130788
17-03-18 03:12:53.854 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13079 mm
17-03-18 03:12:53.854 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:53.854 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 03:12:53.854 -07 000000424 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 03:12:53.854 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:53.854 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 28571, sync = True, waitForSettling = False)
17-03-18 03:12:53.854 -07 000000461 INF: Z Motor: Moving to -0.130790 mm, started at -0.130512 mm, distance = -0.28 um
17-03-18 03:12:53.864 -07 000000461 INF: FPGA: Xmit ZDACW 28571\n [Z Motor]
17-03-18 03:12:53.864 -07 000000629 INF: FPGA: Recv YRDPOS 137977
17-03-18 03:12:53.864 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:12:53.864 -07 000000424 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:53.864 -07 000000424 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:53.864 -07 000000424 INF: Y Motor: Moving 1346 steps-23
17-03-18 03:12:53.864 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:12:53.874 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:53.874 -07 000000461 INF: FPGA: 'ZDACW 28571' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:12:53.884 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:53.884 -07 000000579 INF: FPGA: Recv ZDACR 28571
17-03-18 03:12:53.894 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:53.894 -07 000000461 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 03:12:54.064 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 03:12:54.064 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 03:12:54.064 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:12:54.064 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:54.064 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:12:54.064 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:54.064 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:54.064 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:54.064 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 03:12:54.074 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 03:12:54.254 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:12:54.254 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 390 ms overall
17-03-18 03:12:54.294 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:54.304 -07 000000629 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:12:54.304 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:12:54.304 -07 000000424 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:54.304 -07 000000424 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 03:12:54.304 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.841 mm, average velocity = 2.156 mm/sec
17-03-18 03:12:55.254 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:55.254 -07 000000501 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:12:55.264 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:55.264 -07 000000424 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:55.284 -07 000000424 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:55.284 -07 000000424 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:55.284 -07 000000424 INF: Y Motor: Moved to 68.2046 after 1431 ms (table move)
17-03-18 03:12:55.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130790 mm (DAC = 28571)
17-03-18 03:12:55.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.294 -07 000000618 INF: FPGA: Recv ZSGSRD 29654
17-03-18 03:12:55.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:55.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.304 -07 000000455 INF: FPGA: Recv ZSGSRD 29645
17-03-18 03:12:55.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.314 -07 000000626 INF: FPGA: Recv ZSGSRD 29642
17-03-18 03:12:55.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.324 -07 000000590 INF: FPGA: Recv ZSGSRD 29645
17-03-18 03:12:55.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.334 -07 000000569 INF: FPGA: Recv ZSGSRD 29651
17-03-18 03:12:55.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.344 -07 000000462 INF: FPGA: Recv ZSGSRD 29654
17-03-18 03:12:55.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.354 -07 000000430 INF: FPGA: Recv ZSGSRD 29654
17-03-18 03:12:55.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:55.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.364 -07 000000579 INF: FPGA: Recv ZSGSRD 29647
17-03-18 03:12:55.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.374 -07 000000576 INF: FPGA: Recv ZSGSRD 29646
17-03-18 03:12:55.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.384 -07 000000455 INF: FPGA: Recv ZSGSRD 29650
17-03-18 03:12:55.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:55.394 -07 000000626 INF: FPGA: Recv ZPIEZORD 25123
17-03-18 03:12:55.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.404 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.360 V. Piezo Error = -9.9 V.
17-03-18 03:12:55.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29649 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29648 (-130.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29642 (-130.0 uncal um), Max = 29654 (-130.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:12:55.404 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29649, posNoise = 5, negNoise = 7
17-03-18 03:12:55.404 -07 000000610 INF: Z Motor: After move to -0.130790, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:55.404 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 109 ms (allowed 150 ms), total time = 1542 ms
17-03-18 03:12:55.404 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:55.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 03:12:55.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:55.454 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.130794817802206. ----------
17-03-18 03:12:55.454 -07 000000610 INF: Cycle	109	Tile	11	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:55.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28394, sync = True, waitForSettling = True)
17-03-18 03:12:55.454 -07 000000610 INF: Z Motor: Moving to -0.129979 mm, started at -0.130795 mm, distance = 0.82 um
17-03-18 03:12:55.454 -07 000000610 INF: FPGA: Xmit ZDACW 28394\n [Z Motor]
17-03-18 03:12:55.454 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 03:12:55.464 -07 000000610 INF: FPGA: 'ZDACW 28394' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:12:55.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:55.464 -07 000000512 INF: FPGA: Recv ZDACR 28394
17-03-18 03:12:55.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:55.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.624 -07 000000430 INF: FPGA: Recv ZSGSRD 29522
17-03-18 03:12:55.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:55.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.634 -07 000000579 INF: FPGA: Recv ZSGSRD 29524
17-03-18 03:12:55.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.644 -07 000000444 INF: FPGA: Recv ZSGSRD 29523
17-03-18 03:12:55.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.654 -07 000000455 INF: FPGA: Recv ZSGSRD 29517
17-03-18 03:12:55.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.664 -07 000000512 INF: FPGA: Recv ZSGSRD 29532
17-03-18 03:12:55.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.674 -07 000000618 INF: FPGA: Recv ZSGSRD 29514
17-03-18 03:12:55.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.684 -07 000000591 INF: FPGA: Recv ZSGSRD 29520
17-03-18 03:12:55.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.694 -07 000000629 INF: FPGA: Recv ZSGSRD 29521
17-03-18 03:12:55.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.704 -07 000000590 INF: FPGA: Recv ZSGSRD 29526
17-03-18 03:12:55.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:55.714 -07 000000467 INF: FPGA: Recv ZSGSRD 29521
17-03-18 03:12:55.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:55.724 -07 000000576 INF: FPGA: Recv ZPIEZORD 25004
17-03-18 03:12:55.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:55.734 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.333 V. Piezo Error = -9.9 V.
17-03-18 03:12:55.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29522 (-129.2 uncal um), Error = 0.8 uncal um, Median = 29522 (-129.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29514 (-129.1 uncal um), Max = 29532 (-129.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:12:55.734 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29522, posNoise = 10, negNoise = 8
17-03-18 03:12:55.734 -07 000000610 INF: Z Motor: After move to -0.129979, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:55.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:12:55.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:55.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:55.734 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:55.734 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:55.734 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:55.734 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:55.734 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:55.734 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:55.734 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:55.734 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:55.734 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:55.734 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:55.744 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:12:55.744 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:55.744 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:55.744 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:55.744 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:12:55.744 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:12:55.744 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:12:55.754 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:12:55.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28571 150\n [Camera]
17-03-18 03:12:55.954 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:56.354 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:56.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:56.354 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:56.354 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:56.354 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-18 03:12:56.364 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:56.364 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:56.364 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:56.364 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:56.364 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-18 03:12:56.544 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28571 787
17-03-18 03:12:56.554 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:12:56.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:12:56.694 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:56.734 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:12:56.734 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:12:56.734 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:56.734 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:12:56.734 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 03:12:56.734 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:56.744 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:56.744 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:56.744 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 03:12:56.754 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 03:12:56.814 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.007176,
17-03-18 03:12:56.894 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:12:56.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:12:56.894 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:56.894 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:56.894 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-18 03:12:56.894 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:12:56.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:12:56.894 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:56.894 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:56.894 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-18 03:12:57.084 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:12:57.084 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:12:57.084 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28571 150' command took 4 ms to send, 1323 ms to get response, and 1332 ms overall
17-03-18 03:12:57.084 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130698
17-03-18 03:12:57.084 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13070 mm
17-03-18 03:12:57.084 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:12:57.094 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 03:12:57.094 -07 000000590 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 03:12:57.094 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:57.094 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 28551, sync = True, waitForSettling = False)
17-03-18 03:12:57.094 -07 000000444 INF: Z Motor: Moving to -0.130698 mm, started at -0.129979 mm, distance = -0.72 um
17-03-18 03:12:57.094 -07 000000576 INF: FPGA: Recv YRDPOS 139683
17-03-18 03:12:57.104 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:12:57.104 -07 000000590 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:57.104 -07 000000590 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:12:57.104 -07 000000590 INF: Y Motor: Moving 1341 steps-16
17-03-18 03:12:57.104 -07 000000444 INF: FPGA: Xmit ZDACW 28551\n [Z Motor]
17-03-18 03:12:57.104 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:12:57.114 -07 000000444 INF: FPGA: 'ZDACW 28551' command took 1 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 03:12:57.114 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:12:57.124 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:57.124 -07 000000430 INF: FPGA: Recv ZDACR 28551
17-03-18 03:12:57.134 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:12:57.134 -07 000000444 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 03:12:57.274 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 03:12:57.274 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 03:12:57.274 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:57.274 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:12:57.284 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 03:12:57.284 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:12:57.284 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:12:57.284 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:12:57.284 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:12:57.284 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:12:57.484 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 03:12:57.484 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 03:12:57.534 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:57.544 -07 000000430 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:12:57.544 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:12:57.544 -07 000000590 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:57.544 -07 000000590 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm)
17-03-18 03:12:57.544 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.160 mm/sec
17-03-18 03:12:58.494 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:12:58.494 -07 000000569 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:12:58.504 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:58.504 -07 000000590 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:12:58.524 -07 000000590 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:12:58.524 -07 000000590 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:12:58.524 -07 000000590 INF: Y Motor: Moved to 69.0269 after 1436 ms (table move)
17-03-18 03:12:58.534 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130698 mm (DAC = 28551)
17-03-18 03:12:58.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.534 -07 000000579 INF: FPGA: Recv ZSGSRD 29628
17-03-18 03:12:58.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:12:58.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.544 -07 000000462 INF: FPGA: Recv ZSGSRD 29640
17-03-18 03:12:58.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.554 -07 000000461 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:12:58.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.564 -07 000000569 INF: FPGA: Recv ZSGSRD 29629
17-03-18 03:12:58.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.574 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.574 -07 000000591 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:12:58.584 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.584 -07 000000501 INF: FPGA: Recv ZSGSRD 29632
17-03-18 03:12:58.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.594 -07 000000462 INF: FPGA: Recv ZSGSRD 29625
17-03-18 03:12:58.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.604 -07 000000561 INF: FPGA: Recv ZSGSRD 29635
17-03-18 03:12:58.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.614 -07 000000579 INF: FPGA: Recv ZSGSRD 29639
17-03-18 03:12:58.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.624 -07 000000430 INF: FPGA: Recv ZSGSRD 29638
17-03-18 03:12:58.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.634 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:58.634 -07 000000591 INF: FPGA: Recv ZPIEZORD 25158
17-03-18 03:12:58.644 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.644 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.357 V. Piezo Error = -9.8 V.
17-03-18 03:12:58.644 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29634 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29636 (-129.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29625 (-129.9 uncal um), Max = 29640 (-130.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 03:12:58.644 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29634, posNoise = 6, negNoise = 9
17-03-18 03:12:58.644 -07 000000610 INF: Z Motor: After move to -0.130698, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:58.644 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 108 ms (allowed 150 ms), total time = 1546 ms
17-03-18 03:12:58.644 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:12:58.694 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 03:12:58.694 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:12:58.694 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.130698454620079. ----------
17-03-18 03:12:58.694 -07 000000610 INF: Cycle	109	Tile	12	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:12:58.694 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28374, sync = True, waitForSettling = True)
17-03-18 03:12:58.694 -07 000000610 INF: Z Motor: Moving to -0.129888 mm, started at -0.130698 mm, distance = 0.81 um
17-03-18 03:12:58.694 -07 000000610 INF: FPGA: Xmit ZDACW 28374\n [Z Motor]
17-03-18 03:12:58.694 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 03:12:58.704 -07 000000610 INF: FPGA: 'ZDACW 28374' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:12:58.704 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:12:58.704 -07 000000561 INF: FPGA: Recv ZDACR 28374
17-03-18 03:12:58.714 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.714 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:12:58.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.864 -07 000000501 INF: FPGA: Recv ZSGSRD 29511
17-03-18 03:12:58.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:12:58.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.874 -07 000000467 INF: FPGA: Recv ZSGSRD 29511
17-03-18 03:12:58.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.884 -07 000000579 INF: FPGA: Recv ZSGSRD 29506
17-03-18 03:12:58.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.894 -07 000000430 INF: FPGA: Recv ZSGSRD 29500
17-03-18 03:12:58.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.904 -07 000000502 INF: FPGA: Recv ZSGSRD 29508
17-03-18 03:12:58.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.914 -07 000000501 INF: FPGA: Recv ZSGSRD 29508
17-03-18 03:12:58.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.924 -07 000000512 INF: FPGA: Recv ZSGSRD 29511
17-03-18 03:12:58.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.934 -07 000000626 INF: FPGA: Recv ZSGSRD 29504
17-03-18 03:12:58.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.944 -07 000000512 INF: FPGA: Recv ZSGSRD 29509
17-03-18 03:12:58.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:12:58.954 -07 000000591 INF: FPGA: Recv ZSGSRD 29509
17-03-18 03:12:58.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.964 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:12:58.964 -07 000000430 INF: FPGA: Recv ZPIEZORD 24996
17-03-18 03:12:58.974 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:12:58.974 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.330 V. Piezo Error = -9.9 V.
17-03-18 03:12:58.974 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.9 um, Read 10 ADC samples: Avg = 29508 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29508 (-129.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29500 (-129.1 uncal um), Max = 29511 (-129.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:12:58.974 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29508, posNoise = 3, negNoise = 8
17-03-18 03:12:58.974 -07 000000610 INF: Z Motor: After move to -0.129888, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:12:58.974 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 03:12:58.974 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:12:58.974 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:12:58.974 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:12:58.974 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:12:58.974 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:12:58.974 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:12:58.974 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:12:58.974 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:12:58.974 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:12:58.974 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:12:58.974 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:12:58.974 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:12:58.984 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:12:58.984 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:12:58.984 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:12:58.984 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:12:58.994 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:12:58.994 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 03:12:58.994 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:12:58.994 -07 000000467 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:12:58.994 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28551 150\n [Camera]
17-03-18 03:12:59.194 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:12:59.604 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:12:59.604 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:12:59.604 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:12:59.604 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:12:59.604 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-18 03:12:59.604 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:12:59.604 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:12:59.604 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:12:59.604 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:12:59.604 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-18 03:12:59.794 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28551 787
17-03-18 03:12:59.944 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:12:59.994 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 03:12:59.994 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 03:12:59.994 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:00.004 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 03:13:00.004 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:00.004 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 03:13:00.004 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 03:13:00.004 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:00.004 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:00.014 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 03:13:00.134 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:00.134 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:00.134 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:00.134 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:00.134 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:13:00.134 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:00.134 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:00.144 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:00.144 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:00.144 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) start.
17-03-18 03:13:00.324 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:13:00.324 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:00.324 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28551 150' command took 2 ms to send, 1318 ms to get response, and 1329 ms overall
17-03-18 03:13:00.334 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130335
17-03-18 03:13:00.334 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13033 mm
17-03-18 03:13:00.334 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:00.484 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 28472, sync = True, waitForSettling = False)
17-03-18 03:13:00.484 -07 000000424 INF: Z Motor: Moving to -0.130336 mm, started at -0.129889 mm, distance = -0.45 um
17-03-18 03:13:00.484 -07 000000424 INF: FPGA: Xmit ZDACW 28472\n [Z Motor]
17-03-18 03:13:00.484 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 03:13:00.484 -07 000000512 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 03:13:00.484 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:13:00.494 -07 000000424 INF: FPGA: 'ZDACW 28472' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:00.494 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:00.494 -07 000000569 INF: FPGA: Recv YRDPOS 141367
17-03-18 03:13:00.504 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 03:13:00.504 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:00.504 -07 000000512 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:00.504 -07 000000512 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:00.504 -07 000000512 INF: Y Motor: Moving 1353 steps-32
17-03-18 03:13:00.504 -07 000000629 INF: FPGA: Recv ZDACR 28472
17-03-18 03:13:00.514 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:13:00.514 -07 000000424 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 03:13:00.514 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:00.534 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 03:13:00.534 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 03:13:00.534 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:00.534 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 03:13:00.534 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 03:13:00.534 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:00.544 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:00.544 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 03:13:00.544 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:00.554 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 03:13:00.884 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 03:13:00.884 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-18 03:13:00.934 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:00.934 -07 000000618 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:13:00.944 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:13:00.944 -07 000000512 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:00.944 -07 000000512 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 03:13:00.944 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.846 mm, average velocity = 2.180 mm/sec
17-03-18 03:13:01.554 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:01.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:13:01.894 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:01.894 -07 000000576 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:13:01.904 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:01.904 -07 000000512 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:01.924 -07 000000512 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:01.924 -07 000000512 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:13:01.924 -07 000000512 INF: Y Motor: Moved to 69.8628 after 1443 ms (table move)
17-03-18 03:13:01.934 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130336 mm (DAC = 28472)
17-03-18 03:13:01.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.934 -07 000000590 INF: FPGA: Recv ZSGSRD 29577
17-03-18 03:13:01.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:01.944 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.944 -07 000000455 INF: FPGA: Recv ZSGSRD 29582
17-03-18 03:13:01.954 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:01.954 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.954 -07 000000561 INF: FPGA: Recv ZSGSRD 29587
17-03-18 03:13:01.964 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:01.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.964 -07 000000576 INF: FPGA: Recv ZSGSRD 29583
17-03-18 03:13:01.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:01.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.974 -07 000000444 INF: FPGA: Recv ZSGSRD 29576
17-03-18 03:13:01.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:01.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.984 -07 000000626 INF: FPGA: Recv ZSGSRD 29575
17-03-18 03:13:01.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:01.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:01.994 -07 000000579 INF: FPGA: Recv ZSGSRD 29572
17-03-18 03:13:02.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.004 -07 000000502 INF: FPGA: Recv ZSGSRD 29580
17-03-18 03:13:02.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.014 -07 000000576 INF: FPGA: Recv ZSGSRD 29580
17-03-18 03:13:02.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.024 -07 000000501 INF: FPGA: Recv ZSGSRD 29578
17-03-18 03:13:02.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.034 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:02.034 -07 000000462 INF: FPGA: Recv ZPIEZORD 25065
17-03-18 03:13:02.044 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.044 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.345 V. Piezo Error = -9.9 V.
17-03-18 03:13:02.044 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29579 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29579 (-129.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29572 (-129.5 uncal um), Max = 29587 (-129.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:13:02.044 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29579, posNoise = 8, negNoise = 7
17-03-18 03:13:02.044 -07 000000610 INF: Z Motor: After move to -0.130336, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:02.044 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 109 ms (allowed 150 ms), total time = 1555 ms
17-03-18 03:13:02.044 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:13:02.094 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1758 ms
17-03-18 03:13:02.094 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:02.094 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.130345122952282. ----------
17-03-18 03:13:02.094 -07 000000610 INF: Cycle	109	Tile	13	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:02.094 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28295, sync = True, waitForSettling = True)
17-03-18 03:13:02.094 -07 000000610 INF: Z Motor: Moving to -0.129526 mm, started at -0.130345 mm, distance = 0.82 um
17-03-18 03:13:02.094 -07 000000610 INF: FPGA: Xmit ZDACW 28295\n [Z Motor]
17-03-18 03:13:02.094 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 03:13:02.104 -07 000000610 INF: FPGA: 'ZDACW 28295' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:02.104 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:02.104 -07 000000591 INF: FPGA: Recv ZDACR 28295
17-03-18 03:13:02.114 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.114 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:02.174 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.974486,
17-03-18 03:13:02.264 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.264 -07 000000606 INF: FPGA: Recv ZSGSRD 29457
17-03-18 03:13:02.274 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:02.274 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.274 -07 000000424 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:13:02.284 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.284 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.284 -07 000000591 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:13:02.294 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.294 -07 000000579 INF: FPGA: Recv ZSGSRD 29446
17-03-18 03:13:02.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.304 -07 000000455 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:13:02.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.314 -07 000000462 INF: FPGA: Recv ZSGSRD 29453
17-03-18 03:13:02.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.324 -07 000000461 INF: FPGA: Recv ZSGSRD 29454
17-03-18 03:13:02.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.334 -07 000000629 INF: FPGA: Recv ZSGSRD 29459
17-03-18 03:13:02.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.344 -07 000000501 INF: FPGA: Recv ZSGSRD 29451
17-03-18 03:13:02.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:02.354 -07 000000502 INF: FPGA: Recv ZSGSRD 29452
17-03-18 03:13:02.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:02.364 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:02.364 -07 000000629 INF: FPGA: Recv ZPIEZORD 24993
17-03-18 03:13:02.374 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:02.374 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.318 V. Piezo Error = -9.8 V.
17-03-18 03:13:02.374 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29452 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29452 (-128.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29446 (-128.7 uncal um), Max = 29459 (-128.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:13:02.374 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29452, posNoise = 7, negNoise = 6
17-03-18 03:13:02.374 -07 000000610 INF: Z Motor: After move to -0.129526, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:02.374 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:13:02.374 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:02.374 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:02.374 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:02.374 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:02.374 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:02.374 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:02.374 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:02.374 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:02.374 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:02.374 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:02.374 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:13:02.374 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:02.374 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:13:02.374 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:02.384 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:13:02.384 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:02.394 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 03:13:02.394 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:13:02.394 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:13:02.394 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:13:02.394 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28472 150\n [Camera]
17-03-18 03:13:02.594 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:03.004 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:03.004 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:03.004 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:03.004 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:03.004 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:03.004 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:03.004 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:03.004 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:13:03.004 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:03.004 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:13:03.194 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28472 787
17-03-18 03:13:03.344 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:03.374 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:13:03.374 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 03:13:03.374 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:03.384 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 03:13:03.384 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 03:13:03.384 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:03.384 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:03.384 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:13:03.384 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:03.394 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 03:13:03.534 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:03.534 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:03.534 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:03.534 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:03.534 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:03.544 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:03.544 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:03.544 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 03:13:03.544 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:03.544 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 03:13:03.724 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:13:03.724 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:03.724 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28472 150' command took 2 ms to send, 1318 ms to get response, and 1329 ms overall
17-03-18 03:13:03.734 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:13:03.734 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 14 at Y-position 69.86279296875, Z-Position -0.129529248010279. ------
17-03-18 03:13:03.854 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:13:03.854 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13546 mm
17-03-18 03:13:03.854 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:03.854 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:13:03.854 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 29591, sync = True, waitForSettling = False)
17-03-18 03:13:03.854 -07 000000579 INF: Z Motor: Moving to -0.135459 mm, started at -0.129529 mm, distance = -5.93 um
17-03-18 03:13:03.854 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 03:13:03.854 -07 000000430 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-18 03:13:03.864 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:03.864 -07 000000579 INF: FPGA: Xmit ZDACW 29591\n [Z Motor]
17-03-18 03:13:03.864 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:13:03.874 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:03.874 -07 000000579 INF: FPGA: 'ZDACW 29591' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 03:13:03.874 -07 000000576 INF: FPGA: Recv YRDPOS 143079
17-03-18 03:13:03.884 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:13:03.884 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 03:13:03.884 -07 000000430 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:03.884 -07 000000430 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:03.884 -07 000000430 INF: Y Motor: Moving 1344 steps-20
17-03-18 03:13:03.894 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:03.894 -07 000000444 INF: FPGA: Recv ZDACR 29591
17-03-18 03:13:03.904 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:13:03.904 -07 000000579 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 03:13:03.904 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:03.924 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:13:03.924 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 03:13:03.924 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 03:13:03.924 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:03.924 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:13:03.924 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:03.934 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:13:03.934 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:13:03.934 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:13:03.944 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 03:13:04.084 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:13:04.084 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 03:13:04.274 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 03:13:04.274 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 369 ms to get response, and 397 ms overall
17-03-18 03:13:04.324 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:04.324 -07 000000461 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:13:04.334 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:04.334 -07 000000430 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:04.334 -07 000000430 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:13:04.334 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-18 03:13:05.284 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:05.284 -07 000000579 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:13:05.294 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:05.294 -07 000000430 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:05.314 -07 000000430 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:05.324 -07 000000430 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:13:05.324 -07 000000430 INF: Y Motor: Moved to 70.6880 after 1464 ms (table move)
17-03-18 03:13:05.324 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135459 mm (DAC = 29591)
17-03-18 03:13:05.324 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.324 -07 000000462 INF: FPGA: Recv ZSGSRD 30384
17-03-18 03:13:05.334 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:13:05.334 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.334 -07 000000569 INF: FPGA: Recv ZSGSRD 30372
17-03-18 03:13:05.344 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.344 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.344 -07 000000502 INF: FPGA: Recv ZSGSRD 30376
17-03-18 03:13:05.354 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.354 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.354 -07 000000444 INF: FPGA: Recv ZSGSRD 30372
17-03-18 03:13:05.364 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.364 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.364 -07 000000430 INF: FPGA: Recv ZSGSRD 30375
17-03-18 03:13:05.374 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.374 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.374 -07 000000561 INF: FPGA: Recv ZSGSRD 30374
17-03-18 03:13:05.384 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.384 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.384 -07 000000579 INF: FPGA: Recv ZSGSRD 30368
17-03-18 03:13:05.394 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.394 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.394 -07 000000590 INF: FPGA: Recv ZSGSRD 30385
17-03-18 03:13:05.404 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.404 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.404 -07 000000444 INF: FPGA: Recv ZSGSRD 30378
17-03-18 03:13:05.414 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.414 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:05.414 -07 000000591 INF: FPGA: Recv ZSGSRD 30379
17-03-18 03:13:05.424 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.424 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:05.424 -07 000000618 INF: FPGA: Recv ZPIEZORD 26166
17-03-18 03:13:05.434 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:05.434 -07 000000626 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.515 V. Piezo Error = -9.3 V.
17-03-18 03:13:05.434 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.5 um, Read 10 ADC samples: Avg = 30376 (-134.7 uncal um), Error = 0.8 uncal um, Median = 30376 (-134.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 30368 (-134.6 uncal um), Max = 30385 (-134.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 03:13:05.434 -07 000000626 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30376, posNoise = 9, negNoise = 8
17-03-18 03:13:05.434 -07 000000626 INF: Z Motor: After move to -0.135459, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:05.434 -07 000000626 INF: Z Motor: Settle wait time = 1469 ms, measure time = 106 ms (allowed 150 ms), total time = 1575 ms
17-03-18 03:13:05.434 -07 000000626 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:13:05.484 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1628 ms
17-03-18 03:13:05.484 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:05.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:05.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:05.484 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:05.484 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:05.484 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:13:05.484 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:05.494 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:05.494 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:13:05.494 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:13:05.494 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:13:05.504 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:13:05.504 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 03:13:05.504 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:13:05.554 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:13:05.854 -07 000000629 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:13:05.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:13:05.854 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:13:05.854 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-18 03:13:05.894 -07 000000590 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:13:05.894 -07 000000444 INF: FPGA: Recv CAMSNAP
17-03-18 03:13:05.894 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 383 ms to get response, and 384 ms overall
17-03-18 03:13:05.974 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 124 ms.
17-03-18 03:13:05.974 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:05.984 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:13:05.984 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms.
17-03-18 03:13:05.994 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:13:05.994 -07 000000606 INF: Autofocus start
17-03-18 03:13:05.994 -07 000000606 INF: MeasureProfile start
17-03-18 03:13:05.994 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:13:06.004 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:13:06.004 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:13:06.014 -07 000000606 INF: MeasureProfile done
17-03-18 03:13:06.014 -07 000000606 INF: X=0  Z correction [um]=-0.02394831
17-03-18 03:13:06.014 -07 000000606 INF: Autofocus finished
17-03-18 03:13:06.204 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:13:06.204 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:13:06.204 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.135465220029266. ----------
17-03-18 03:13:06.214 -07 000000610 INF: Cycle	109	Tile	14	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:06.214 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28099, sync = True, waitForSettling = True)
17-03-18 03:13:06.214 -07 000000610 INF: Z Motor: Moving to -0.128629 mm, started at -0.135465 mm, distance = 6.84 um
17-03-18 03:13:06.214 -07 000000610 INF: FPGA: Xmit ZDACW 28099\n [Z Motor]
17-03-18 03:13:06.214 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 03:13:06.224 -07 000000610 INF: FPGA: 'ZDACW 28099' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:13:06.224 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:06.224 -07 000000430 INF: FPGA: Recv ZDACR 28099
17-03-18 03:13:06.234 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.234 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:06.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.384 -07 000000462 INF: FPGA: Recv ZSGSRD 29307
17-03-18 03:13:06.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.394 -07 000000618 INF: FPGA: Recv ZSGSRD 29310
17-03-18 03:13:06.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.404 -07 000000455 INF: FPGA: Recv ZSGSRD 29311
17-03-18 03:13:06.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.414 -07 000000579 INF: FPGA: Recv ZSGSRD 29313
17-03-18 03:13:06.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.424 -07 000000444 INF: FPGA: Recv ZSGSRD 29314
17-03-18 03:13:06.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.434 -07 000000462 INF: FPGA: Recv ZSGSRD 29313
17-03-18 03:13:06.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.444 -07 000000626 INF: FPGA: Recv ZSGSRD 29314
17-03-18 03:13:06.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.454 -07 000000461 INF: FPGA: Recv ZSGSRD 29314
17-03-18 03:13:06.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.464 -07 000000424 INF: FPGA: Recv ZSGSRD 29315
17-03-18 03:13:06.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:06.474 -07 000000629 INF: FPGA: Recv ZSGSRD 29311
17-03-18 03:13:06.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.484 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:06.484 -07 000000561 INF: FPGA: Recv ZPIEZORD 24808
17-03-18 03:13:06.494 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:06.494 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.288 V. Piezo Error = -9.9 V.
17-03-18 03:13:06.494 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29312 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29313 (-127.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29307 (-127.8 uncal um), Max = 29315 (-127.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 03:13:06.494 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29312, posNoise = 3, negNoise = 5
17-03-18 03:13:06.494 -07 000000610 INF: Z Motor: After move to -0.128629, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:06.494 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:13:06.494 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:06.494 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:06.494 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:06.494 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:06.494 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:06.494 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:06.494 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:06.494 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:06.494 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:13:06.494 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:06.494 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:06.494 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:06.504 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:13:06.504 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:06.504 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:13:06.504 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:06.514 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:13:06.514 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:13:06.514 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:13:06.514 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:13:06.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28276 150\n [Camera]
17-03-18 03:13:06.554 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:06.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:13:06.714 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:07.114 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:07.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:07.114 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:07.114 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:07.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:07.114 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:07.124 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:07.124 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:13:07.124 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:07.124 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:13:07.304 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28276 787
17-03-18 03:13:07.454 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:07.494 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:13:07.494 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 03:13:07.494 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:07.494 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:13:07.494 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 03:13:07.494 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:07.504 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:13:07.504 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:13:07.504 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 03:13:07.514 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:13:07.534 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.975845,
17-03-18 03:13:07.654 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:07.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:07.654 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:07.654 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:07.654 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-18 03:13:07.654 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:07.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:07.654 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:07.654 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:07.654 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) start.
17-03-18 03:13:07.844 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:13:07.844 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:07.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28276 150' command took 2 ms to send, 1322 ms to get response, and 1329 ms overall
17-03-18 03:13:07.844 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129285
17-03-18 03:13:07.844 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12928 mm
17-03-18 03:13:07.844 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:07.844 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 03:13:07.844 -07 000000444 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 03:13:07.844 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:07.844 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28242, sync = True, waitForSettling = False)
17-03-18 03:13:07.844 -07 000000502 INF: Z Motor: Moving to -0.129284 mm, started at -0.128630 mm, distance = -0.65 um
17-03-18 03:13:07.854 -07 000000502 INF: FPGA: Xmit ZDACW 28242\n [Z Motor]
17-03-18 03:13:07.854 -07 000000569 INF: FPGA: Recv YRDPOS 144769
17-03-18 03:13:07.854 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:13:07.854 -07 000000444 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:07.854 -07 000000444 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:07.854 -07 000000444 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:13:07.854 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 03:13:07.864 -07 000000502 INF: FPGA: 'ZDACW 28242' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 03:13:07.864 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:07.864 -07 000000569 INF: FPGA: Recv ZDACR 28242
17-03-18 03:13:07.874 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:07.874 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:07.874 -07 000000502 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 03:13:08.044 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:13:08.044 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:13:08.044 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:08.044 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 03:13:08.044 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 03:13:08.044 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:08.054 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:08.054 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 03:13:08.054 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:08.064 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 03:13:08.244 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 03:13:08.244 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:13:08.294 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:08.294 -07 000000629 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:13:08.304 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:13:08.304 -07 000000444 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:08.304 -07 000000444 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:13:08.304 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec
17-03-18 03:13:09.254 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:09.254 -07 000000569 INF: FPGA: Recv YRDPOS 146469
17-03-18 03:13:09.264 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:09.264 -07 000000444 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:09.284 -07 000000444 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:09.284 -07 000000444 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:13:09.284 -07 000000444 INF: Y Motor: Moved to 71.5181 after 1441 ms (table move)
17-03-18 03:13:09.294 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129284 mm (DAC = 28242)
17-03-18 03:13:09.294 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.294 -07 000000424 INF: FPGA: Recv ZSGSRD 29409
17-03-18 03:13:09.304 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:09.304 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.304 -07 000000502 INF: FPGA: Recv ZSGSRD 29412
17-03-18 03:13:09.314 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.314 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.314 -07 000000467 INF: FPGA: Recv ZSGSRD 29418
17-03-18 03:13:09.324 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.324 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.324 -07 000000501 INF: FPGA: Recv ZSGSRD 29418
17-03-18 03:13:09.334 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.334 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.334 -07 000000591 INF: FPGA: Recv ZSGSRD 29420
17-03-18 03:13:09.344 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:09.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.344 -07 000000590 INF: FPGA: Recv ZSGSRD 29419
17-03-18 03:13:09.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.354 -07 000000512 INF: FPGA: Recv ZSGSRD 29414
17-03-18 03:13:09.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.364 -07 000000430 INF: FPGA: Recv ZSGSRD 29415
17-03-18 03:13:09.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.374 -07 000000467 INF: FPGA: Recv ZSGSRD 29413
17-03-18 03:13:09.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.384 -07 000000569 INF: FPGA: Recv ZSGSRD 29408
17-03-18 03:13:09.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.394 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:09.394 -07 000000576 INF: FPGA: Recv ZPIEZORD 24969
17-03-18 03:13:09.404 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.404 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.309 V. Piezo Error = -9.8 V.
17-03-18 03:13:09.404 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29415 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29414 (-128.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29408 (-128.5 uncal um), Max = 29420 (-128.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:13:09.404 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29415, posNoise = 5, negNoise = 7
17-03-18 03:13:09.404 -07 000000610 INF: Z Motor: After move to -0.129284, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:09.404 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 109 ms (allowed 150 ms), total time = 1551 ms
17-03-18 03:13:09.404 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 03:13:09.454 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-18 03:13:09.454 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:09.454 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.129291552161034. ----------
17-03-18 03:13:09.454 -07 000000610 INF: Cycle	109	Tile	15	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:09.454 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28066, sync = True, waitForSettling = True)
17-03-18 03:13:09.454 -07 000000610 INF: Z Motor: Moving to -0.128478 mm, started at -0.129292 mm, distance = 0.81 um
17-03-18 03:13:09.454 -07 000000610 INF: FPGA: Xmit ZDACW 28066\n [Z Motor]
17-03-18 03:13:09.454 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 03:13:09.464 -07 000000610 INF: FPGA: 'ZDACW 28066' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:09.464 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:09.464 -07 000000561 INF: FPGA: Recv ZDACR 28066
17-03-18 03:13:09.474 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.474 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:09.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.624 -07 000000467 INF: FPGA: Recv ZSGSRD 29294
17-03-18 03:13:09.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:09.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.634 -07 000000512 INF: FPGA: Recv ZSGSRD 29294
17-03-18 03:13:09.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.644 -07 000000576 INF: FPGA: Recv ZSGSRD 29295
17-03-18 03:13:09.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.654 -07 000000629 INF: FPGA: Recv ZSGSRD 29295
17-03-18 03:13:09.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.664 -07 000000430 INF: FPGA: Recv ZSGSRD 29287
17-03-18 03:13:09.674 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.674 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.674 -07 000000629 INF: FPGA: Recv ZSGSRD 29285
17-03-18 03:13:09.684 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.684 -07 000000501 INF: FPGA: Recv ZSGSRD 29289
17-03-18 03:13:09.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.694 -07 000000590 INF: FPGA: Recv ZSGSRD 29290
17-03-18 03:13:09.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 2 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.704 -07 000000579 INF: FPGA: Recv ZSGSRD 29288
17-03-18 03:13:09.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:09.714 -07 000000430 INF: FPGA: Recv ZSGSRD 29291
17-03-18 03:13:09.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.724 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:09.724 -07 000000462 INF: FPGA: Recv ZPIEZORD 24829
17-03-18 03:13:09.734 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:09.734 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.283 V. Piezo Error = -9.8 V.
17-03-18 03:13:09.734 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29291 (-127.7 uncal um), Error = 0.8 uncal um, Median = 29290 (-127.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29285 (-127.7 uncal um), Max = 29295 (-127.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:13:09.734 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29291, posNoise = 4, negNoise = 6
17-03-18 03:13:09.734 -07 000000610 INF: Z Motor: After move to -0.128478, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:09.734 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 03:13:09.734 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:09.734 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:09.734 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:09.734 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:09.734 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:09.734 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:09.734 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:09.734 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:09.734 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 03:13:09.734 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:09.734 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:09.734 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:09.744 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 03:13:09.744 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:09.744 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:13:09.744 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:09.744 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:13:09.744 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:13:09.744 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:13:09.744 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:13:09.754 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28242 150\n [Camera]
17-03-18 03:13:09.954 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:10.354 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:10.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:10.354 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:10.354 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:10.354 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 03:13:10.354 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:10.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:10.354 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:10.354 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:10.354 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 03:13:10.544 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28242 787
17-03-18 03:13:10.694 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:10.754 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 03:13:10.754 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 03:13:10.754 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:10.754 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 03:13:10.754 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 03:13:10.754 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:10.754 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:13:10.754 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 03:13:10.754 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 03:13:10.764 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 03:13:10.894 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:10.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:10.894 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:10.894 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:10.894 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 03:13:10.894 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:10.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:10.894 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:10.894 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:10.894 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 03:13:11.084 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1323
17-03-18 03:13:11.084 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:11.084 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28242 150' command took 2 ms to send, 1323 ms to get response, and 1329 ms overall
17-03-18 03:13:11.084 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.128818
17-03-18 03:13:11.084 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12882 mm
17-03-18 03:13:11.084 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:11.094 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 03:13:11.094 -07 000000461 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 03:13:11.094 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:11.094 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 28140, sync = True, waitForSettling = False)
17-03-18 03:13:11.094 -07 000000467 INF: Z Motor: Moving to -0.128817 mm, started at -0.128495 mm, distance = -0.32 um
17-03-18 03:13:11.094 -07 000000501 INF: FPGA: Recv YRDPOS 146470
17-03-18 03:13:11.104 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:13:11.104 -07 000000461 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:11.104 -07 000000467 INF: FPGA: Xmit ZDACW 28140\n [Z Motor]
17-03-18 03:13:11.104 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 03:13:11.104 -07 000000461 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:11.104 -07 000000461 INF: Y Motor: Moving 1350 steps-30
17-03-18 03:13:11.114 -07 000000467 INF: FPGA: 'ZDACW 28140' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 03:13:11.114 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:11.124 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:11.124 -07 000000512 INF: FPGA: Recv ZDACR 28140
17-03-18 03:13:11.134 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:13:11.134 -07 000000467 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 03:13:11.274 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:13:11.274 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:13:11.274 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:11.274 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:13:11.274 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 03:13:11.274 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:11.284 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:11.284 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:11.284 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:13:11.284 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 03:13:11.484 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 03:13:11.484 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-18 03:13:11.534 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:11.534 -07 000000561 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:13:11.544 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:13:11.544 -07 000000461 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:11.544 -07 000000461 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 03:13:11.544 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.845 mm, average velocity = 2.205 mm/sec
17-03-18 03:13:11.554 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:11.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:13:12.494 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:12.494 -07 000000618 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:13:12.504 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:12.504 -07 000000461 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:12.524 -07 000000461 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:12.524 -07 000000461 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:13:12.524 -07 000000461 INF: Y Motor: Moved to 72.3491 after 1436 ms (table move)
17-03-18 03:13:12.534 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128817 mm (DAC = 28140)
17-03-18 03:13:12.534 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.534 -07 000000501 INF: FPGA: Recv ZSGSRD 29340
17-03-18 03:13:12.544 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:12.544 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.544 -07 000000618 INF: FPGA: Recv ZSGSRD 29346
17-03-18 03:13:12.554 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.554 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.554 -07 000000462 INF: FPGA: Recv ZSGSRD 29344
17-03-18 03:13:12.564 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.564 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.564 -07 000000502 INF: FPGA: Recv ZSGSRD 29343
17-03-18 03:13:12.574 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.584 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.584 -07 000000444 INF: FPGA: Recv ZSGSRD 29338
17-03-18 03:13:12.594 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:13:12.594 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.594 -07 000000561 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:13:12.604 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.604 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.604 -07 000000467 INF: FPGA: Recv ZSGSRD 29342
17-03-18 03:13:12.614 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.614 -07 000000455 INF: FPGA: Recv ZSGSRD 29343
17-03-18 03:13:12.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.624 -07 000000579 INF: FPGA: Recv ZSGSRD 29351
17-03-18 03:13:12.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.634 -07 000000618 INF: FPGA: Recv ZSGSRD 29351
17-03-18 03:13:12.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.644 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:12.644 -07 000000462 INF: FPGA: Recv ZPIEZORD 24877
17-03-18 03:13:12.654 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.654 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.294 V. Piezo Error = -9.8 V.
17-03-18 03:13:12.654 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29344 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29343 (-128.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29338 (-128.0 uncal um), Max = 29351 (-128.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:13:12.654 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29344, posNoise = 7, negNoise = 6
17-03-18 03:13:12.654 -07 000000610 INF: Z Motor: After move to -0.128817, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:12.654 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 119 ms (allowed 150 ms), total time = 1557 ms
17-03-18 03:13:12.654 -07 000000610 INF: Z Motor: Waiting extra 31 ms after reading position to reach expected total of 150 ms
17-03-18 03:13:12.694 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-18 03:13:12.694 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:12.694 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.128835433098969. ----------
17-03-18 03:13:12.694 -07 000000610 INF: Cycle	109	Tile	16	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:12.694 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27963, sync = True, waitForSettling = True)
17-03-18 03:13:12.694 -07 000000610 INF: Z Motor: Moving to -0.128006 mm, started at -0.128835 mm, distance = 0.83 um
17-03-18 03:13:12.694 -07 000000610 INF: FPGA: Xmit ZDACW 27963\n [Z Motor]
17-03-18 03:13:12.694 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:13:12.704 -07 000000610 INF: FPGA: 'ZDACW 27963' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:12.704 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:12.704 -07 000000591 INF: FPGA: Recv ZDACR 27963
17-03-18 03:13:12.714 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.714 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:12.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.864 -07 000000579 INF: FPGA: Recv ZSGSRD 29212
17-03-18 03:13:12.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:12.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.874 -07 000000590 INF: FPGA: Recv ZSGSRD 29219
17-03-18 03:13:12.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.894 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 3.963579,
17-03-18 03:13:12.894 -07 000000424 INF: FPGA: Recv ZSGSRD 29215
17-03-18 03:13:12.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:13:12.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.904 -07 000000618 INF: FPGA: Recv ZSGSRD 29220
17-03-18 03:13:12.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.934 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.934 -07 000000576 INF: FPGA: Recv ZSGSRD 29215
17-03-18 03:13:12.944 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:13:12.964 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.964 -07 000000591 INF: FPGA: Recv ZSGSRD 29208
17-03-18 03:13:12.974 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:13:12.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.974 -07 000000576 INF: FPGA: Recv ZSGSRD 29214
17-03-18 03:13:12.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.984 -07 000000618 INF: FPGA: Recv ZSGSRD 29218
17-03-18 03:13:12.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:12.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:12.994 -07 000000467 INF: FPGA: Recv ZSGSRD 29214
17-03-18 03:13:13.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:13.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:13.004 -07 000000512 INF: FPGA: Recv ZSGSRD 29217
17-03-18 03:13:13.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:13.014 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:13.014 -07 000000501 INF: FPGA: Recv ZPIEZORD 24722
17-03-18 03:13:13.024 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:13.024 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.267 V. Piezo Error = -9.9 V.
17-03-18 03:13:13.024 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29215 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29215 (-127.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29208 (-127.2 uncal um), Max = 29220 (-127.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 03:13:13.024 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29215, posNoise = 5, negNoise = 7
17-03-18 03:13:13.024 -07 000000610 INF: Z Motor: After move to -0.128006, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:13.024 -07 000000610 INF: Z Motor: MoveAbsStepped took 325 ms)
17-03-18 03:13:13.024 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:13.024 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:13.024 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:13.024 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:13.024 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:13.024 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:13.024 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:13.024 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:13.024 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:13.024 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:13.024 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:13:13.024 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:13.034 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 03:13:13.034 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:13.034 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:13:13.034 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:13.044 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:13:13.044 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:13:13.044 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 03:13:13.044 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 03:13:13.054 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28140 150\n [Camera]
17-03-18 03:13:13.244 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:13.654 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:13.654 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:13.654 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:13.654 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:13.654 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 03:13:13.654 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:13.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:13.654 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:13.654 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:13.654 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 03:13:13.844 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28140 787
17-03-18 03:13:13.994 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:14.054 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 03:13:14.054 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 03:13:14.054 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:14.064 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 405 ms.
17-03-18 03:13:14.064 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 03:13:14.064 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:14.064 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:14.064 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-18 03:13:14.064 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:14.074 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 420 ms.
17-03-18 03:13:14.184 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:14.184 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:14.184 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:14.184 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:14.184 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 03:13:14.194 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:14.194 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:14.194 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:14.194 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:14.194 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 03:13:14.384 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1325
17-03-18 03:13:14.384 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:14.384 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28140 150' command took 2 ms to send, 1322 ms to get response, and 1332 ms overall
17-03-18 03:13:14.384 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128573
17-03-18 03:13:14.384 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12857 mm
17-03-18 03:13:14.384 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:14.384 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 03:13:14.384 -07 000000606 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 03:13:14.384 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:14.384 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28087, sync = True, waitForSettling = False)
17-03-18 03:13:14.384 -07 000000502 INF: Z Motor: Moving to -0.128574 mm, started at -0.128007 mm, distance = -0.57 um
17-03-18 03:13:14.394 -07 000000502 INF: FPGA: Xmit ZDACW 28087\n [Z Motor]
17-03-18 03:13:14.394 -07 000000618 INF: FPGA: Recv YRDPOS 148171
17-03-18 03:13:14.394 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:13:14.394 -07 000000606 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:14.394 -07 000000606 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:14.394 -07 000000606 INF: Y Motor: Moving 1350 steps-28
17-03-18 03:13:14.394 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 03:13:14.404 -07 000000502 INF: FPGA: 'ZDACW 28087' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:13:14.404 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:14.404 -07 000000590 INF: FPGA: Recv ZDACR 28087
17-03-18 03:13:14.414 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:14.414 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:14.414 -07 000000502 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:13:14.574 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 03:13:14.574 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 03:13:14.574 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:14.574 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 03:13:14.574 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 03:13:14.574 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:14.574 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:14.574 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 03:13:14.574 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:14.584 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:13:14.784 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 03:13:14.784 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 03:13:14.834 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:14.834 -07 000000618 INF: FPGA: Recv YRDPOS 149863
17-03-18 03:13:14.844 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:13:14.844 -07 000000606 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:14.844 -07 000000606 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 03:13:14.844 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.125 mm/sec
17-03-18 03:13:15.794 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:15.794 -07 000000626 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:13:15.804 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:15.804 -07 000000606 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:15.824 -07 000000606 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:15.824 -07 000000606 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 03:13:15.824 -07 000000606 INF: Y Motor: Moved to 73.1758 after 1442 ms (table move)
17-03-18 03:13:15.834 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128574 mm (DAC = 28087)
17-03-18 03:13:15.834 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.834 -07 000000576 INF: FPGA: Recv ZSGSRD 29309
17-03-18 03:13:15.844 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 03:13:15.844 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.844 -07 000000561 INF: FPGA: Recv ZSGSRD 29304
17-03-18 03:13:15.854 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.854 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.854 -07 000000579 INF: FPGA: Recv ZSGSRD 29304
17-03-18 03:13:15.864 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.864 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.864 -07 000000626 INF: FPGA: Recv ZSGSRD 29310
17-03-18 03:13:15.874 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.874 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.874 -07 000000444 INF: FPGA: Recv ZSGSRD 29314
17-03-18 03:13:15.884 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.884 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.884 -07 000000579 INF: FPGA: Recv ZSGSRD 29308
17-03-18 03:13:15.894 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:15.894 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.894 -07 000000576 INF: FPGA: Recv ZSGSRD 29303
17-03-18 03:13:15.904 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.904 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.904 -07 000000512 INF: FPGA: Recv ZSGSRD 29303
17-03-18 03:13:15.914 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.914 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.914 -07 000000462 INF: FPGA: Recv ZSGSRD 29302
17-03-18 03:13:15.924 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.924 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:15.924 -07 000000502 INF: FPGA: Recv ZSGSRD 29304
17-03-18 03:13:15.934 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.934 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:15.934 -07 000000569 INF: FPGA: Recv ZPIEZORD 24850
17-03-18 03:13:15.944 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:15.944 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.286 V. Piezo Error = -9.8 V.
17-03-18 03:13:15.944 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29306 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29304 (-127.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29302 (-127.8 uncal um), Max = 29314 (-127.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:13:15.944 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29306, posNoise = 8, negNoise = 4
17-03-18 03:13:15.944 -07 000000610 INF: Z Motor: After move to -0.128574, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:15.944 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 108 ms (allowed 150 ms), total time = 1552 ms
17-03-18 03:13:15.944 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 03:13:15.994 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-18 03:13:15.994 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:15.994 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.128591313037582. ----------
17-03-18 03:13:15.994 -07 000000610 INF: Cycle	109	Tile	17	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:15.994 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27910, sync = True, waitForSettling = True)
17-03-18 03:13:15.994 -07 000000610 INF: Z Motor: Moving to -0.127764 mm, started at -0.128591 mm, distance = 0.83 um
17-03-18 03:13:15.994 -07 000000610 INF: FPGA: Xmit ZDACW 27910\n [Z Motor]
17-03-18 03:13:15.994 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 03:13:16.004 -07 000000610 INF: FPGA: 'ZDACW 27910' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:16.004 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:16.004 -07 000000590 INF: FPGA: Recv ZDACR 27910
17-03-18 03:13:16.014 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.014 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:16.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.164 -07 000000461 INF: FPGA: Recv ZSGSRD 29174
17-03-18 03:13:16.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:16.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.174 -07 000000444 INF: FPGA: Recv ZSGSRD 29178
17-03-18 03:13:16.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.184 -07 000000467 INF: FPGA: Recv ZSGSRD 29181
17-03-18 03:13:16.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.194 -07 000000579 INF: FPGA: Recv ZSGSRD 29179
17-03-18 03:13:16.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.204 -07 000000569 INF: FPGA: Recv ZSGSRD 29175
17-03-18 03:13:16.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.214 -07 000000626 INF: FPGA: Recv ZSGSRD 29184
17-03-18 03:13:16.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.224 -07 000000618 INF: FPGA: Recv ZSGSRD 29178
17-03-18 03:13:16.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.234 -07 000000561 INF: FPGA: Recv ZSGSRD 29180
17-03-18 03:13:16.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.244 -07 000000455 INF: FPGA: Recv ZSGSRD 29178
17-03-18 03:13:16.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:16.254 -07 000000512 INF: FPGA: Recv ZSGSRD 29176
17-03-18 03:13:16.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.264 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:16.264 -07 000000606 INF: FPGA: Recv ZPIEZORD 24646
17-03-18 03:13:16.274 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:16.274 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.259 V. Piezo Error = -9.9 V.
17-03-18 03:13:16.274 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.8 um, Read 10 ADC samples: Avg = 29178 (-127.0 uncal um), Error = 0.8 uncal um, Median = 29178 (-127.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29174 (-127.0 uncal um), Max = 29184 (-127.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:13:16.274 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29178, posNoise = 6, negNoise = 4
17-03-18 03:13:16.274 -07 000000610 INF: Z Motor: After move to -0.127764, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:16.274 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 03:13:16.274 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:16.274 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:16.274 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:16.274 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:16.274 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:16.274 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:16.274 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:16.274 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:16.274 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:13:16.274 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:16.274 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:16.274 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:16.284 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:13:16.284 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:16.284 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 03:13:16.284 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:16.294 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 03:13:16.294 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:13:16.294 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:13:16.294 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 03:13:16.304 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 28087 150\n [Camera]
17-03-18 03:13:16.494 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:16.554 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:16.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:13:16.904 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:16.904 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:16.904 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:16.904 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:16.904 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:13:16.904 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:16.904 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:16.904 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:17.054 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:17.054 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:13:17.094 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28087 787
17-03-18 03:13:17.244 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:17.294 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 03:13:17.294 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 03:13:17.294 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:17.294 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:17.294 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 03:13:17.424 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 03:13:17.424 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 03:13:17.424 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:17.424 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:17.434 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 527 ms.
17-03-18 03:13:17.434 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:17.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:17.434 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:17.444 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:17.444 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:17.444 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:17.444 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:17.444 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 03:13:17.444 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:17.444 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start.
17-03-18 03:13:17.624 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:13:17.624 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:17.634 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 28087 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:13:17.634 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 03:13:17.634 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17578125, Z-Position -0.127769013883436. ------
17-03-18 03:13:17.634 -07 000000606 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.13412 mm
17-03-18 03:13:17.634 -07 000000606 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:17.644 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 03:13:17.644 -07 000000461 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-18 03:13:17.644 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 29298, sync = True, waitForSettling = False)
17-03-18 03:13:17.644 -07 000000591 INF: Z Motor: Moving to -0.134118 mm, started at -0.127769 mm, distance = -6.35 um
17-03-18 03:13:17.654 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:13:17.654 -07 000000629 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:13:17.664 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:17.664 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 03:13:17.664 -07 000000618 INF: FPGA: Recv YRDPOS 149864
17-03-18 03:13:17.674 -07 000000591 INF: FPGA: Xmit ZDACW 29298\n [Z Motor]
17-03-18 03:13:17.674 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 03:13:17.674 -07 000000461 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:17.674 -07 000000461 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:17.674 -07 000000461 INF: Y Motor: Moving 1355 steps-35
17-03-18 03:13:17.674 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 03:13:17.684 -07 000000591 INF: FPGA: 'ZDACW 29298' command took 0 ms to send, 0 ms to get response, and 37 ms overall
17-03-18 03:13:17.694 -07 000000430 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 03:13:17.704 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:17.714 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:17.714 -07 000000569 INF: FPGA: Recv ZDACR 29298
17-03-18 03:13:17.724 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall
17-03-18 03:13:17.724 -07 000000591 INF: Z Motor: MoveAbsStepped took 78 ms (did NOT wait for settling yet))
17-03-18 03:13:17.824 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 03:13:17.824 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 03:13:17.824 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:17.824 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:13:17.824 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:13:17.824 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:17.834 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:17.834 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:13:17.834 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:17.834 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 03:13:17.894 -07 000000512 INF: FPGA: Recv FOCMRRFOC
17-03-18 03:13:17.894 -07 000000430 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 231 ms overall
17-03-18 03:13:18.084 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 03:13:18.084 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 410 ms overall
17-03-18 03:13:18.114 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:18.124 -07 000000455 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:13:18.124 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 03:13:18.124 -07 000000461 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:18.124 -07 000000461 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 03:13:18.124 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 411 ms, distance = 0.847 mm, average velocity = 2.060 mm/sec
17-03-18 03:13:18.284 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.004458,
17-03-18 03:13:19.074 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:19.074 -07 000000444 INF: FPGA: Recv YRDPOS 151568
17-03-18 03:13:19.084 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:19.084 -07 000000461 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:19.104 -07 000000461 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:19.104 -07 000000461 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:13:19.104 -07 000000461 INF: Y Motor: Moved to 74.0078 after 1460 ms (table move)
17-03-18 03:13:19.104 -07 000000606 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134118 mm (DAC = 29298)
17-03-18 03:13:19.104 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.114 -07 000000590 INF: FPGA: Recv ZSGSRD 30169
17-03-18 03:13:19.114 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 03:13:19.114 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.114 -07 000000501 INF: FPGA: Recv ZSGSRD 30165
17-03-18 03:13:19.124 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.124 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.124 -07 000000576 INF: FPGA: Recv ZSGSRD 30170
17-03-18 03:13:19.134 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.134 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.134 -07 000000579 INF: FPGA: Recv ZSGSRD 30165
17-03-18 03:13:19.144 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.144 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.144 -07 000000629 INF: FPGA: Recv ZSGSRD 30171
17-03-18 03:13:19.154 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.154 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.154 -07 000000444 INF: FPGA: Recv ZSGSRD 30164
17-03-18 03:13:19.164 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.164 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.164 -07 000000501 INF: FPGA: Recv ZSGSRD 30170
17-03-18 03:13:19.174 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.174 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.174 -07 000000561 INF: FPGA: Recv ZSGSRD 30173
17-03-18 03:13:19.184 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.184 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.184 -07 000000590 INF: FPGA: Recv ZSGSRD 30166
17-03-18 03:13:19.194 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.194 -07 000000606 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:19.194 -07 000000591 INF: FPGA: Recv ZSGSRD 30166
17-03-18 03:13:19.204 -07 000000606 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.204 -07 000000606 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:19.204 -07 000000569 INF: FPGA: Recv ZPIEZORD 25957
17-03-18 03:13:19.214 -07 000000606 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:19.214 -07 000000606 INF: Z Motor: Piezo is near 35.5 V (nominally 0 to 100 V), expect near 44.7 V, since DAC is at 4.471 V. Piezo Error = -9.3 V.
17-03-18 03:13:19.214 -07 000000606 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.1 um, Read 10 ADC samples: Avg = 30168 (-133.3 uncal um), Error = 0.8 uncal um, Median = 30168 (-133.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 30164 (-133.3 uncal um), Max = 30173 (-133.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:13:19.214 -07 000000606 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30168, posNoise = 5, negNoise = 4
17-03-18 03:13:19.214 -07 000000606 INF: Z Motor: After move to -0.134118, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:19.214 -07 000000606 INF: Z Motor: Settle wait time = 1462 ms, measure time = 106 ms (allowed 150 ms), total time = 1568 ms
17-03-18 03:13:19.214 -07 000000606 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 03:13:19.264 -07 000000606 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1625 ms
17-03-18 03:13:19.264 -07 000000606 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:19.264 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:19.264 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:19.264 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:19.264 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:19.264 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 03:13:19.264 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:19.264 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 03:13:19.264 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 03:13:19.274 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 03:13:19.274 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 03:13:19.284 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 03:13:19.284 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 03:13:19.284 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 03:13:19.334 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 03:13:19.634 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 03:13:19.634 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 03:13:19.634 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 03:13:19.634 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) start.
17-03-18 03:13:19.674 -07 000000618 INF: FPGA: Recv @CAMSNAP 380
17-03-18 03:13:19.674 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 03:13:19.674 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 03:13:19.754 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610341080, 0x0, 559484976) end. Duration was 122 ms.
17-03-18 03:13:19.754 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:19.754 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 03:13:19.754 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 125 ms.
17-03-18 03:13:19.774 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 03:13:19.774 -07 000000629 INF: Autofocus start
17-03-18 03:13:19.774 -07 000000629 INF: MeasureProfile start
17-03-18 03:13:19.774 -07 000000606 INF: FPGA: Recv FOCMRRCUR 
17-03-18 03:13:19.784 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 03:13:19.784 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 03:13:19.784 -07 000000629 INF: MeasureProfile done
17-03-18 03:13:19.784 -07 000000629 INF: X=-16  Z correction [um]=-0.08128808
17-03-18 03:13:19.784 -07 000000629 INF: Autofocus finished
17-03-18 03:13:19.984 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-18 03:13:19.984 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 03:13:19.984 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.13412898390378. ----------
17-03-18 03:13:19.984 -07 000000610 INF: Cycle	109	Tile	18	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:19.994 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27793, sync = True, waitForSettling = True)
17-03-18 03:13:19.994 -07 000000610 INF: Z Motor: Moving to -0.127228 mm, started at -0.134129 mm, distance = 6.90 um
17-03-18 03:13:19.994 -07 000000610 INF: FPGA: Xmit ZDACW 27793\n [Z Motor]
17-03-18 03:13:19.994 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 03:13:20.004 -07 000000610 INF: FPGA: 'ZDACW 27793' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 03:13:20.004 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:20.004 -07 000000606 INF: FPGA: Recv ZDACR 27793
17-03-18 03:13:20.014 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.014 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:20.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.164 -07 000000579 INF: FPGA: Recv ZSGSRD 29092
17-03-18 03:13:20.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:20.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.174 -07 000000467 INF: FPGA: Recv ZSGSRD 29094
17-03-18 03:13:20.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.184 -07 000000569 INF: FPGA: Recv ZSGSRD 29092
17-03-18 03:13:20.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.194 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.194 -07 000000455 INF: FPGA: Recv ZSGSRD 29094
17-03-18 03:13:20.204 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.204 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.204 -07 000000430 INF: FPGA: Recv ZSGSRD 29097
17-03-18 03:13:20.214 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.214 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.214 -07 000000576 INF: FPGA: Recv ZSGSRD 29090
17-03-18 03:13:20.224 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.224 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.224 -07 000000430 INF: FPGA: Recv ZSGSRD 29094
17-03-18 03:13:20.234 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.234 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.234 -07 000000561 INF: FPGA: Recv ZSGSRD 29098
17-03-18 03:13:20.244 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.244 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.244 -07 000000444 INF: FPGA: Recv ZSGSRD 29092
17-03-18 03:13:20.254 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.254 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:20.254 -07 000000461 INF: FPGA: Recv ZSGSRD 29095
17-03-18 03:13:20.264 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.264 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:20.264 -07 000000467 INF: FPGA: Recv ZPIEZORD 24544
17-03-18 03:13:20.274 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:20.274 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.4 V, since DAC is at 4.241 V. Piezo Error = -10.0 V.
17-03-18 03:13:20.274 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.2 um, Read 10 ADC samples: Avg = 29094 (-126.5 uncal um), Error = 0.8 uncal um, Median = 29094 (-126.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29090 (-126.4 uncal um), Max = 29098 (-126.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:13:20.274 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29094, posNoise = 4, negNoise = 4
17-03-18 03:13:20.274 -07 000000610 INF: Z Motor: After move to -0.127228, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:20.274 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 03:13:20.274 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:20.274 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:20.274 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:20.274 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:20.274 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:20.274 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:20.274 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:20.274 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:20.274 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 03:13:20.274 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:20.274 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:13:20.274 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:20.284 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:13:20.284 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:20.284 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 03:13:20.284 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:20.284 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 03:13:20.284 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 03:13:20.294 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 03:13:20.294 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 03:13:20.294 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 27970 150\n [Camera]
17-03-18 03:13:20.494 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:20.894 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:20.894 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:20.894 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:20.894 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:20.894 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-18 03:13:20.894 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:20.894 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:20.894 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:21.014 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:21.014 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 03:13:21.084 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27970 787
17-03-18 03:13:21.234 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:21.274 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 03:13:21.274 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 03:13:21.274 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:21.284 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:21.284 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 03:13:21.394 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:13:21.394 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 03:13:21.394 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:21.394 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:21.404 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms.
17-03-18 03:13:21.434 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:21.434 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:21.434 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:21.434 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:21.434 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:21.434 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:21.444 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:21.444 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 03:13:21.454 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:21.454 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 03:13:21.554 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 03:13:21.554 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 108. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1601, R2=1668, Total=3269. Warn if over 250 bubbles per interval.
17-03-18 03:13:21.624 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:13:21.624 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:21.624 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 27970 150' command took 2 ms to send, 1322 ms to get response, and 1329 ms overall
17-03-18 03:13:21.624 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127235
17-03-18 03:13:21.624 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12723 mm
17-03-18 03:13:21.624 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 03:13:21.624 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 03:13:21.624 -07 000000467 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 03:13:21.624 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:21.624 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 27794, sync = True, waitForSettling = False)
17-03-18 03:13:21.624 -07 000000501 INF: Z Motor: Moving to -0.127233 mm, started at -0.127229 mm, distance = 0.00 um
17-03-18 03:13:21.634 -07 000000424 INF: FPGA: Recv YRDPOS 151569
17-03-18 03:13:21.634 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 03:13:21.634 -07 000000467 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:21.634 -07 000000501 INF: FPGA: Xmit ZDACW 27794\n [Z Motor]
17-03-18 03:13:21.634 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 03:13:21.634 -07 000000467 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 03:13:21.634 -07 000000467 INF: Y Motor: Moving 1351 steps-30
17-03-18 03:13:21.644 -07 000000501 INF: FPGA: 'ZDACW 27794' command took 3 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 03:13:21.644 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:21.644 -07 000000561 INF: FPGA: Recv ZDACR 27794
17-03-18 03:13:21.654 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 03:13:21.654 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:21.654 -07 000000501 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-18 03:13:21.824 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 03:13:21.824 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:13:21.824 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:21.824 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:21.824 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 03:13:21.824 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 03:13:21.824 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:21.834 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 03:13:21.834 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 03:13:21.834 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 03:13:22.024 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 03:13:22.024 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall
17-03-18 03:13:22.054 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:22.064 -07 000000626 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:13:22.064 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 03:13:22.064 -07 000000467 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:22.064 -07 000000467 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 03:13:22.064 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.845 mm, average velocity = 2.155 mm/sec
17-03-18 03:13:23.014 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 03:13:23.014 -07 000000579 INF: FPGA: Recv YRDPOS 153254
17-03-18 03:13:23.024 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:23.024 -07 000000467 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 03:13:23.034 -07 000000467 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 03:13:23.034 -07 000000467 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 03:13:23.034 -07 000000467 INF: Y Motor: Moved to 74.8311 after 1412 ms (table move)
17-03-18 03:13:23.044 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127233 mm (DAC = 27794)
17-03-18 03:13:23.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.064 -07 000000590 INF: FPGA: Recv ZSGSRD 29096
17-03-18 03:13:23.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 03:13:23.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.094 -07 000000606 INF: FPGA: Recv ZSGSRD 29095
17-03-18 03:13:23.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 03:13:23.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.104 -07 000000512 INF: FPGA: Recv ZSGSRD 29100
17-03-18 03:13:23.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.124 -07 000000502 INF: FPGA: Recv ZSGSRD 29092
17-03-18 03:13:23.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 03:13:23.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.134 -07 000000430 INF: FPGA: Recv ZSGSRD 29097
17-03-18 03:13:23.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.144 -07 000000501 INF: FPGA: Recv ZSGSRD 29096
17-03-18 03:13:23.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.154 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.154 -07 000000590 INF: FPGA: Recv ZSGSRD 29094
17-03-18 03:13:23.164 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.164 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.164 -07 000000444 INF: FPGA: Recv ZSGSRD 29096
17-03-18 03:13:23.174 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.174 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.174 -07 000000629 INF: FPGA: Recv ZSGSRD 29098
17-03-18 03:13:23.184 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.184 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.184 -07 000000467 INF: FPGA: Recv ZSGSRD 29096
17-03-18 03:13:23.194 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.194 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:23.194 -07 000000424 INF: FPGA: Recv ZPIEZORD 24535
17-03-18 03:13:23.204 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.4 V, since DAC is at 4.241 V. Piezo Error = -10.0 V.
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.2 um, Read 10 ADC samples: Avg = 29096 (-126.5 uncal um), Error = 0.8 uncal um, Median = 29096 (-126.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29092 (-126.4 uncal um), Max = 29100 (-126.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29096, posNoise = 4, negNoise = 4
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: After move to -0.127233, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: Settle wait time = 1414 ms, measure time = 158 ms (allowed 150 ms), total time = 1572 ms
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 158 ms, longer than max expected time of 150 ms
17-03-18 03:13:23.204 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-18 03:13:23.204 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 03:13:23.204 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.127242228487812. ----------
17-03-18 03:13:23.204 -07 000000610 INF: Cycle	109	Tile	19	Exposure Settings		A	402	G	193	T	193	C	402
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27618, sync = True, waitForSettling = True)
17-03-18 03:13:23.204 -07 000000610 INF: Z Motor: Moving to -0.126427 mm, started at -0.127242 mm, distance = 0.82 um
17-03-18 03:13:23.204 -07 000000610 INF: FPGA: Xmit ZDACW 27618\n [Z Motor]
17-03-18 03:13:23.204 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 03:13:23.214 -07 000000610 INF: FPGA: 'ZDACW 27618' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 03:13:23.214 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 03:13:23.214 -07 000000444 INF: FPGA: Recv ZDACR 27618
17-03-18 03:13:23.224 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.224 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 03:13:23.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.374 -07 000000576 INF: FPGA: Recv ZSGSRD 28972
17-03-18 03:13:23.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 03:13:23.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.384 -07 000000606 INF: FPGA: Recv ZSGSRD 28973
17-03-18 03:13:23.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.394 -07 000000591 INF: FPGA: Recv ZSGSRD 28969
17-03-18 03:13:23.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.404 -07 000000502 INF: FPGA: Recv ZSGSRD 28965
17-03-18 03:13:23.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.414 -07 000000512 INF: FPGA: Recv ZSGSRD 28967
17-03-18 03:13:23.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.424 -07 000000424 INF: FPGA: Recv ZSGSRD 28979
17-03-18 03:13:23.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.434 -07 000000561 INF: FPGA: Recv ZSGSRD 28974
17-03-18 03:13:23.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.444 -07 000000461 INF: FPGA: Recv ZSGSRD 28971
17-03-18 03:13:23.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.454 -07 000000569 INF: FPGA: Recv ZSGSRD 28967
17-03-18 03:13:23.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 03:13:23.464 -07 000000590 INF: FPGA: Recv ZSGSRD 28973
17-03-18 03:13:23.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.474 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 03:13:23.474 -07 000000501 INF: FPGA: Recv ZPIEZORD 24364
17-03-18 03:13:23.484 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 03:13:23.484 -07 000000610 INF: Z Motor: Piezo is near 32.0 V (nominally 0 to 100 V), expect near 42.1 V, since DAC is at 4.214 V. Piezo Error = -10.1 V.
17-03-18 03:13:23.484 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.4 um, Read 10 ADC samples: Avg = 28971 (-125.7 uncal um), Error = 0.8 uncal um, Median = 28972 (-125.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 28965 (-125.6 uncal um), Max = 28979 (-125.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 03:13:23.484 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 28971, posNoise = 8, negNoise = 6
17-03-18 03:13:23.484 -07 000000610 INF: Z Motor: After move to -0.126427, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 03:13:23.484 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 03:13:23.484 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 03:13:23.484 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 03:13:23.484 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 03:13:23.484 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 03:13:23.484 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 03:13:23.484 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 03:13:23.484 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 03:13:23.484 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 03:13:23.484 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 03:13:23.484 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 03:13:23.484 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 03:13:23.484 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 03:13:23.494 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 03:13:23.494 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 03:13:23.494 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 03:13:23.494 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 03:13:23.504 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 03:13:23.504 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:13:23.504 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 03:13:23.504 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 03:13:23.514 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 402 402 193 193 27794 150\n [Camera]
17-03-18 03:13:23.644 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.033041,
17-03-18 03:13:23.704 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 03:13:24.114 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 594
17-03-18 03:13:24.114 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 594
17-03-18 03:13:24.114 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:24.114 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 594
17-03-18 03:13:24.114 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 594
17-03-18 03:13:24.114 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:24.114 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:24.114 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 03:13:24.124 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:24.124 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 03:13:24.304 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27794 787
17-03-18 03:13:24.454 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 937
17-03-18 03:13:24.494 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 03:13:24.494 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 03:13:24.494 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:24.494 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 03:13:24.494 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 03:13:24.494 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:24.494 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:13:24.494 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 03:13:24.494 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:13:24.504 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 03:13:24.644 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1130
17-03-18 03:13:24.644 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1130
17-03-18 03:13:24.644 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 03:13:24.644 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 03:13:24.644 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 03:13:24.654 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1130
17-03-18 03:13:24.654 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1130
17-03-18 03:13:24.654 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 03:13:24.654 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 03:13:24.654 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 03:13:24.834 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1322
17-03-18 03:13:24.834 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 03:13:24.844 -07 000000610 INF: FPGA: 'CAMDBLSNAP 402 402 193 193 27794 150' command took 2 ms to send, 1319 ms to get response, and 1329 ms overall
17-03-18 03:13:25.034 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 03:13:25.034 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 03:13:25.034 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:25.034 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 03:13:25.034 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 03:13:25.034 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 03:13:25.044 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:25.044 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 03:13:25.044 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 03:13:25.044 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 03:13:25.044 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 03:13:25.084 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 03:13:25.084 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 03:13:25.124 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 03:13:25.264 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 03:13:25.264 -07 000000610 INF: Imaging Cycle 109: ScanTilesCommand Cycle 109 time end. Duration was 141723 ms.
17-03-18 03:13:25.264 -07 000000610 INF: =================== Cycle #109 ===================
17-03-18 03:13:25.264 -07 000000610 INF: ===================  ===================
17-03-18 03:13:25.264 -07 000000444 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 03:13:25.264 -07 000000430 INF: FPGA: Recv EXLED1ADCR 22
17-03-18 03:13:25.274 -07 000000444 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 03:13:25.274 -07 000000444 INF: GreenLED: Using Green data: Photodiode ADC 22 --> 0.0 mW (old method), or 1.6 mW (new method). Difference = 1.6 mW
17-03-18 03:13:25.274 -07 000000444 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 109, FrontChillerTemperature: 4.033041, FrontChillerHeatSinkTemperature: 0.595956, AmbientTemperature: 18.73752, FlowCellCompartmentTemperature: 21.99692, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.7549, GreenLEDSensorTemperature: 24.96387, PhotodiodePowerAdcGreen: 22, PhotodiodePowerMwGreen: 1.562308
17-03-18 03:13:25.374 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.